Result : Q9KTD6
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Phosphocarrier protein HPr (Histidine-containing protein) |
| NCBI Accession ID | AE003852.1 |
| Organism | Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) |
| Left | 1031615 |
| Right | 1031872 |
| Strand | - |
| Nucleotide Sequence | ATGTACGAGAAGCAAGTAGAAATCACTGCAGAAAACGGCCTTCACACTCGTCCTGCTGCACAGTTTGTTAAAGAAGCAAAAGCCTTCGATGCAGACATCACTGTGACTTCTAACGGTAAAAGTGCAAGCGCGAAAAGTCTGTTCAAGCTGCAAACGCTAGGTCTGGTAAAAGGTACTGTCGTGACTATCTCTGCCGAAGGCCCTCAAGCAAAAGAAGCTGTTGAGCACCTAGTTGCTCTGATGGACCAACTTCACTAA |
| Sequence | MYEKQVEITAENGLHTRPAAQFVKEAKAFDADITVTSNGKSASAKSLFKLQTLGLVKGTVVTISAEGPQAKEAVEHLVALMDQLH |
| Source of smORF | Swiss-Prot |
| Function | General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the phosphoryl carrier protein HPr by enzyme I. Phospho-HPr then transfers it to the PTS EIIA domain. {ECO:0000250}. |
| Pubmed ID | 10952301 |
| Domain | CDD:412221 |
| Functional Category | Others |
| Uniprot ID | Q9KTD6 |
| ORF Length (Amino Acid) | 85 |
++ More..
| Conservation Analysis |
No. of Species: 262
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 580250 | 580507 | - | NZ_CP035688.1 | Vibrio metoecus |
| 2 | 880950 | 881207 | - | NZ_AP014524.1 | Vibrio cholerae MS6 |
| 3 | 937845 | 938102 | + | NZ_CP046793.1 | Vibrio metschnikovii |
| 4 | 2113529 | 2113786 | + | NZ_AP019657.1 | Vibrio ponticus |
| 5 | 959826 | 960083 | - | NZ_CP044069.1 | Vibrio vulnificus |
| 6 | 1883829 | 1884086 | + | NZ_CP014035.2 | Vibrio fluvialis |
| 7 | 1372193 | 1372450 | - | NZ_CP040990.1 | Vibrio furnissii |
| 8 | 833464 | 833721 | - | NZ_CP047475.1 | Vibrio astriarenae |
| 9 | 790252 | 790509 | - | NZ_CP030788.1 | Vibrio campbellii |
| 10 | 2432701 | 2432958 | + | NZ_CP031781.1 | Vibrio parahaemolyticus |
| 11 | 2306582 | 2306839 | + | NZ_CP018312.1 | Vibrio rotiferianus |
| 12 | 1009551 | 1009808 | + | NZ_CP019959.1 | Vibrio owensii |
| 13 | 1034375 | 1034632 | - | NZ_CP009467.1 | Vibrio harveyi |
| 14 | 1417664 | 1417921 | + | NZ_CP025792.1 | Vibrio jasicida 090810c |
| 15 | 2485265 | 2485522 | + | NZ_CP009354.1 | Vibrio tubiashii ATCC 19109 |
| 16 | 852632 | 852889 | - | NZ_CP022741.1 | Vibrio qinghaiensis |
| 17 | 2508406 | 2508663 | + | NZ_AP014635.1 | Vibrio tritonius |
| 18 | 2235708 | 2235965 | + | NZ_CP016414.1 | Vibrio scophthalmi |
| 19 | 733535 | 733792 | - | NZ_AP019651.1 | Vibrio taketomensis |
| 20 | 1900481 | 1900738 | + | NZ_AP018685.1 | Vibrio rumoiensis |
| 21 | 2092069 | 2092326 | + | NZ_CP009977.1 | Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 |
| 22 | 2828073 | 2828330 | + | NC_013456.1 | Vibrio antiquarius |
| 23 | 2310484 | 2310741 | + | NZ_CP032093.1 | Vibrio alfacsensis |
| 24 | 1940128 | 1940385 | + | NZ_CP033078.1 | Vibrio zhugei |
| 25 | 793471 | 793728 | - | NZ_CP045350.1 | Vibrio aquimaris |
| 26 | 601158 | 601415 | + | NZ_CP065150.1 | Vibrio kanaloae |
| 27 | 2461609 | 2461866 | + | NC_011753.2 | Vibrio atlanticus |
| 28 | 843809 | 844066 | - | NZ_CP039700.1 | Vibrio cyclitrophicus |
| 29 | 808879 | 809136 | - | NZ_AP018689.1 | Vibrio aphrogenes |
| 30 | 2607658 | 2607915 | + | NZ_CP071325.1 | Photobacterium ganghwense |
| 31 | 1420645 | 1420902 | + | NZ_LT960611.1 | Vibrio tapetis subsp. tapetis |
| 32 | 1035957 | 1036214 | - | NZ_CP046268.1 | Vibrio spartinae |
| 33 | 786362 | 786619 | - | NZ_CP040021.1 | Salinivibrio kushneri |
| 34 | 3326899 | 3327156 | + | NZ_CP005974.1 | Photobacterium gaetbulicola Gung47 |
| 35 | 2532306 | 2532563 | + | NC_011312.1 | Aliivibrio salmonicida LFI1238 |
| 36 | 460853 | 461110 | + | NZ_CP014056.2 | Grimontia hollisae |
| 37 | 1050664 | 1050921 | - | NZ_LS483470.1 | Leminorella richardii |
| 38 | 853457 | 853714 | - | NZ_CP040449.1 | Aeromonas simiae |
| 39 | 142011 | 142268 | + | NZ_CP065745.1 | Aeromonas allosaccharophila |
| 40 | 1182690 | 1182947 | + | NZ_LS483458.1 | Haemophilus haemolyticus |
| 41 | 4467291 | 4467548 | + | NZ_CP044060.1 | Aeromonas veronii |
| 42 | 1206124 | 1206381 | + | NZ_LS483443.1 | Aggregatibacter segnis ATCC 33393 |
| 43 | 2212043 | 2212300 | + | NZ_CP051883.1 | Aeromonas salmonicida |
| 44 | 3458524 | 3458781 | + | NZ_CP050851.1 | Aeromonas hydrophila |
| 45 | 3293598 | 3293855 | + | NZ_LR134376.1 | Aeromonas encheleia |
| 46 | 3385842 | 3386099 | + | NZ_AP022188.1 | Aeromonas media |
| 47 | 3102615 | 3102872 | - | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 48 | 541048 | 541305 | + | NZ_CP023706.1 | Edwardsiella tarda |
| 49 | 1130780 | 1131037 | + | NZ_CP011078.1 | Yersinia ruckeri |
| 50 | 2493128 | 2493385 | + | NZ_CP016043.1 | Edwardsiella hoshinae |
| 51 | 927712 | 927969 | - | NZ_CP028897.1 | Dongshaea marina |
| 52 | 876725 | 876982 | - | NZ_LT615367.1 | Dickeya aquatica |
| 53 | 1224711 | 1224968 | - | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 54 | 2068186 | 2068443 | - | NZ_LT906463.1 | Haemophilus pittmaniae |
| 55 | 2857908 | 2858165 | + | NZ_LR134531.1 | Pragia fontium |
| 56 | 2658319 | 2658576 | + | NZ_CP023567.1 | Erwinia pyrifoliae |
| 57 | 2553585 | 2553842 | + | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 58 | 1346084 | 1346341 | - | NZ_CP071320.1 | Serratia ureilytica |
| 59 | 3071228 | 3071485 | + | NZ_CP016948.1 | Serratia surfactantfaciens |
| 60 | 3788192 | 3788449 | + | NZ_LT906479.1 | Serratia ficaria |
| 61 | 3767367 | 3767624 | + | NZ_CP048784.1 | Serratia liquefaciens |
| 62 | 3834745 | 3835002 | + | NZ_LR134494.1 | Serratia quinivorans |
| 63 | 4213771 | 4214028 | - | NZ_CP014136.1 | Gibbsiella quercinecans |
| 64 | 1084390 | 1084647 | - | NZ_CP029185.2 | Limnobaculum parvum |
| 65 | 1236301 | 1236558 | - | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 66 | 3809614 | 3809871 | + | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 67 | 3885948 | 3886205 | + | NC_015567.1 | Serratia plymuthica AS9 |
| 68 | 1435681 | 1435938 | + | NZ_LR134327.1 | Aggregatibacter aphrophilus ATCC 33389 |
| 69 | 2781813 | 2782070 | + | NZ_LN907827.1 | Erwinia gerundensis |
| 70 | 1487331 | 1487588 | - | NZ_CP018804.1 | Histophilus somni |
| 71 | 1367435 | 1367692 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 72 | 2781908 | 2782165 | + | NZ_CP007445.1 | Gilliamella apicola |
| 73 | 3280242 | 3280499 | + | NZ_CP032487.1 | Yersinia hibernica |
| 74 | 1224721 | 1224978 | + | NZ_CP033744.1 | Citrobacter freundii |
| 75 | 2893641 | 2893898 | + | NZ_CP034148.1 | Pantoea agglomerans |
| 76 | 1166693 | 1166950 | - | NZ_CP045720.1 | Pantoea eucalypti |
| 77 | 1135180 | 1135437 | - | NZ_CP038853.1 | Pantoea vagans |
| 78 | 1559579 | 1559836 | + | NZ_CP049115.1 | Pantoea stewartii |
| 79 | 1360521 | 1360778 | - | NC_017554.1 | Pantoea ananatis PA13 |
| 80 | 1402468 | 1402725 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 81 | 1126941 | 1127198 | - | NZ_CP015031.1 | Basfia succiniciproducens |
| 82 | 1500728 | 1500985 | - | NC_006300.1 | [Mannheimia] succiniciproducens MBEL55E |
| 83 | 3498845 | 3499102 | + | NZ_CP042220.2 | Dickeya poaceiphila |
| 84 | 991079 | 991336 | - | NC_014500.1 | Dickeya dadantii 3937 |
| 85 | 1835722 | 1835979 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 86 | 2786515 | 2786772 | - | NZ_CP019706.1 | Pantoea alhagi |
| 87 | 3068106 | 3068363 | + | NZ_CP061511.1 | Mixta calida |
| 88 | 2950423 | 2950680 | - | NZ_CP042941.1 | Atlantibacter hermannii |
| 89 | 3286386 | 3286643 | + | NZ_CP026377.1 | Mixta gaviniae |
| 90 | 2433904 | 2434161 | + | NZ_CP028271.1 | Mixta intestinalis |
| 91 | 3287654 | 3287911 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 92 | 3743419 | 3743676 | + | NC_012880.1 | Musicola paradisiaca Ech703 |
| 93 | 1131918 | 1132175 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 94 | 1398941 | 1399198 | - | NZ_CP050150.1 | Hafnia alvei |
| 95 | 3896029 | 3896286 | - | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 96 | 896047 | 896304 | - | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 97 | 348260 | 348517 | + | NZ_LR134510.1 | Actinobacillus delphinicola |
| 98 | 4834319 | 4834576 | - | NZ_CP067057.1 | Rahnella aceris |
| 99 | 1453266 | 1453523 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 100 | 4820268 | 4820525 | + | NZ_CP007230.1 | Yersinia similis |
| 101 | 4839643 | 4839900 | + | NZ_CP020388.1 | Pluralibacter gergoviae |
| 102 | 950019 | 950276 | - | NZ_CP038498.1 | Pectobacterium punjabense |
| 103 | 323655 | 323912 | - | NZ_CP027107.1 | Cronobacter sakazakii |
| 104 | 1052241 | 1052498 | - | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 105 | 3064182 | 3064439 | + | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 106 | 3128037 | 3128294 | + | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 107 | 875697 | 875954 | - | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 108 | 1200226 | 1200483 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 109 | 3200517 | 3200774 | + | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 110 | 3079306 | 3079563 | + | NZ_LR134340.1 | Escherichia marmotae |
| 111 | 1102797 | 1103054 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 112 | 515862 | 516119 | + | NZ_CP053416.1 | Salmonella bongori |
| 113 | 4285855 | 4286112 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 114 | 2531064 | 2531321 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 115 | 3356514 | 3356771 | + | NZ_AP022508.1 | Enterobacter bugandensis |
| 116 | 2533764 | 2534021 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 117 | 2507881 | 2508138 | + | NZ_AP014857.1 | Escherichia albertii |
| 118 | 3361499 | 3361756 | + | NZ_CP027986.1 | Enterobacter sichuanensis |
| 119 | 3391057 | 3391314 | + | NZ_CP017184.1 | Enterobacter roggenkampii |
| 120 | 1358370 | 1358627 | - | NZ_CP013990.1 | Leclercia adecarboxylata |
| 121 | 3364610 | 3364867 | + | NC_015968.1 | Enterobacter soli |
| 122 | 3719247 | 3719504 | + | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 123 | 3472120 | 3472377 | + | NZ_CP009756.1 | Enterobacter cloacae |
| 124 | 2648312 | 2648569 | + | NZ_CP017279.1 | Enterobacter ludwigii |
| 125 | 2544585 | 2544842 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 126 | 154629 | 154886 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 127 | 48119 | 48376 | + | NZ_CP065640.1 | Serratia rubidaea |
| 128 | 4765283 | 4765540 | + | NZ_LT556085.1 | Citrobacter amalonaticus |
| 129 | 3682248 | 3682505 | + | NZ_CP043318.1 | Enterobacter chengduensis |
| 130 | 1344579 | 1344836 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 131 | 1389069 | 1389326 | - | NZ_CP041247.1 | Raoultella electrica |
| 132 | 2496193 | 2496450 | + | NC_013716.1 | Citrobacter rodentium ICC168 |
| 133 | 2030076 | 2030333 | - | NZ_CP045205.1 | Citrobacter telavivensis |
| 134 | 302961 | 303218 | + | NZ_CP026047.1 | Raoultella planticola |
| 135 | 3258290 | 3258547 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 136 | 1400571 | 1400828 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 137 | 1438468 | 1438725 | - | NZ_CP050508.1 | Raoultella terrigena |
| 138 | 3633047 | 3633304 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 139 | 3383493 | 3383750 | + | NZ_CP029736.1 | Providencia rettgeri |
| 140 | 2176081 | 2176338 | + | NZ_CP031123.2 | Providencia huaxiensis |
| 141 | 1538150 | 1538407 | - | NZ_LR134167.1 | Avibacterium volantium |
| 142 | 1256268 | 1256525 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 143 | 3078703 | 3078960 | - | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 144 | 1690400 | 1690657 | - | NZ_CP048796.1 | Providencia vermicola |
| 145 | 1517302 | 1517559 | - | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 146 | 910587 | 910844 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 147 | 4893931 | 4894188 | + | NZ_CP040428.1 | Jejubacter calystegiae |
| 148 | 3307872 | 3308129 | + | NZ_CP046293.1 | Yersinia intermedia |
| 149 | 1049697 | 1049954 | + | NZ_CP016605.1 | Bisgaardia hudsonensis |
| 150 | 2539014 | 2539271 | + | NZ_CP040863.1 | Rodentibacter heylii |
| 151 | 1867244 | 1867501 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 152 | 1110144 | 1110401 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 153 | 1308110 | 1308367 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 154 | 1193529 | 1193786 | - | NZ_LR134201.1 | Cedecea lapagei |
| 155 | 4818103 | 4818360 | - | NZ_CP038469.1 | Citrobacter tructae |
| 156 | 3875457 | 3875714 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 157 | 1220446 | 1220703 | - | NZ_CP023525.1 | Cedecea neteri |
| 158 | 1379709 | 1379966 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 159 | 3864941 | 3865198 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 160 | 1389668 | 1389925 | - | NZ_CP054254.1 | Klebsiella variicola |
| 161 | 1561682 | 1561939 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 162 | 1647373 | 1647630 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 163 | 4302672 | 4302929 | + | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 164 | 1376174 | 1376431 | - | NZ_CP043727.1 | Yersinia canariae |
| 165 | 362412 | 362669 | - | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 166 | 687220 | 687477 | + | NZ_CP047495.1 | Pectobacterium brasiliense |
| 167 | 3867362 | 3867619 | + | NZ_CP051652.1 | Pectobacterium carotovorum |
| 168 | 4016673 | 4016930 | + | NZ_CP065044.1 | Pectobacterium aroidearum |
| 169 | 909700 | 909957 | - | NZ_CP034938.1 | Pectobacterium odoriferum |
| 170 | 4757233 | 4757490 | - | NZ_CP017482.1 | Pectobacterium polaris |
| 171 | 3053376 | 3053633 | + | NZ_CP015749.1 | Pectobacterium parmentieri |
| 172 | 2728488 | 2728745 | - | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 173 | 3247976 | 3248233 | + | NZ_CP014137.1 | Brenneria goodwinii |
| 174 | 1219244 | 1219501 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 175 | 1307010 | 1307267 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 176 | 4519196 | 4519453 | - | NZ_CP016337.1 | Kosakonia sacchari |
| 177 | 3451583 | 3451840 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 178 | 4550425 | 4550682 | - | NZ_CP045300.1 | Kosakonia arachidis |
| 179 | 1501076 | 1501333 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 180 | 3662718 | 3662975 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 181 | 3838330 | 3838587 | + | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 182 | 931995 | 932252 | - | NZ_CP025799.1 | Dickeya zeae |
| 183 | 917331 | 917588 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 184 | 202003 | 202260 | - | NZ_CP016176.1 | Xenorhabdus hominickii |
| 185 | 1748308 | 1748565 | + | NZ_CP028926.1 | Pasteurella multocida |
| 186 | 2111295 | 2111552 | + | NZ_CP023529.1 | Lelliottia amnigena |
| 187 | 1506449 | 1506706 | + | NZ_CP009787.1 | Yersinia rohdei |
| 188 | 1939806 | 1940063 | - | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 189 | 607538 | 607795 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 190 | 2897195 | 2897452 | + | NZ_CP065534.1 | Lonsdalea populi |
| 191 | 3999563 | 3999820 | - | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 192 | 207984 | 208241 | + | NZ_CP011104.1 | Photorhabdus thracensis |
| 193 | 1678237 | 1678494 | - | NZ_LS483422.1 | Providencia heimbachae |
| 194 | 2889313 | 2889570 | + | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 195 | 1590564 | 1590821 | - | NC_012962.1 | Photorhabdus asymbiotica |
| 196 | 3762198 | 3762455 | + | NZ_CP038662.1 | Serratia nematodiphila |
| 197 | 5975092 | 5975349 | + | NZ_CP011254.1 | Serratia fonticola |
| 198 | 3071247 | 3071504 | + | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 199 | 3025750 | 3026007 | + | NZ_CP015581.1 | Tatumella citrea |
| 200 | 1673844 | 1674101 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 201 | 1965759 | 1966016 | + | NC_010554.1 | Proteus mirabilis HI4320 |
| 202 | 2636411 | 2636698 | + | NZ_CP070624.1 | Photobacterium damselae subsp. damselae |
| 203 | 2433365 | 2433622 | - | NZ_CP023536.1 | Providencia alcalifaciens |
| 204 | 2609181 | 2609438 | - | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 205 | 683122 | 683379 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 206 | 562128 | 562385 | + | NZ_LT906448.1 | Pasteurella dagmatis |
| 207 | 255912 | 256169 | + | NZ_CP026364.1 | Proteus hauseri |
| 208 | 1805282 | 1805539 | - | NZ_LS483429.1 | Haemophilus aegyptius |
| 209 | 1136808 | 1137065 | + | NZ_CP009610.1 | Haemophilus influenzae |
| 210 | 707373 | 707630 | - | NC_012691.1 | Tolumonas auensis DSM 9187 |
| 211 | 94446 | 94703 | + | NZ_CP009056.1 | Frischella perrara |
| 212 | 945833 | 946090 | - | NC_011852.1 | Glaesserella parasuis SH0165 |
| 213 | 397580 | 397837 | + | NC_021883.1 | Mannheimia haemolytica USMARC_2286 |
| 214 | 273405 | 273662 | + | NZ_CP016604.1 | Otariodibacter oris |
| 215 | 140686 | 140943 | + | NZ_CP015029.1 | Frederiksenia canicola |
| 216 | 311798 | 312055 | + | NZ_CP006944.1 | Mannheimia varigena USDA-ARS-USMARC-1312 |
| 217 | 238758 | 239015 | - | NZ_CP061280.1 | Mannheimia bovis |
| 218 | 1740231 | 1740488 | - | NZ_CP016180.1 | Pasteurella skyensis |
| 219 | 122857 | 123114 | - | NZ_CP046531.1 | Mannheimia ovis |
| 220 | 2612660 | 2612917 | + | NZ_CP044399.1 | Moritella marina ATCC 15381 |
| 221 | 312416 | 312673 | - | NZ_CP006954.1 | Bibersteinia trehalosi USDA-ARS-USMARC-188 |
| 222 | 116135 | 116392 | - | NZ_CP055305.1 | Mannheimia pernigra |
| 223 | 164735 | 164995 | - | NZ_CP029206.1 | Actinobacillus porcitonsillarum |
| 224 | 4401943 | 4402200 | - | NZ_LS483250.1 | Moritella yayanosii |
| 225 | 1046097 | 1046354 | - | NZ_CP022355.1 | Paraphotobacterium marinum |
| 226 | 1892752 | 1893009 | - | NZ_CP069213.1 | Shewanella litorisediminis |
| 227 | 2016223 | 2016480 | - | NC_008700.1 | Shewanella amazonensis SB2B |
| 228 | 2685941 | 2686198 | - | NC_010506.1 | Shewanella woodyi ATCC 51908 |
| 229 | 1511783 | 1512040 | - | NZ_CP020373.1 | Shewanella khirikhana |
| 230 | 2552027 | 2552284 | + | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 231 | 2935904 | 2936161 | + | NC_009831.1 | Shewanella sediminis HAW-EB3 |
| 232 | 2987976 | 2988233 | + | NC_008709.1 | Psychromonas ingrahamii 37 |
| 233 | 2169779 | 2170036 | - | NZ_CP022358.1 | Shewanella bicestrii |
| 234 | 2865840 | 2866097 | + | NC_016901.1 | Shewanella baltica OS678 |
| 235 | 2350098 | 2350355 | - | NZ_CP046378.1 | Shewanella algae |
| 236 | 2143712 | 2143969 | - | NC_007954.1 | Shewanella denitrificans OS217 |
| 237 | 216960 | 217217 | + | NZ_CP036200.1 | Shewanella maritima |
| 238 | 69325 | 69582 | - | NC_004545.1 | Buchnera aphidicola str. Bp (Baizongia pistaciae) |
| 239 | 2791600 | 2791857 | + | NC_010334.1 | Shewanella halifaxensis HAW-EB4 |
| 240 | 2830339 | 2830596 | + | NC_011566.1 | Shewanella piezotolerans WP3 |
| 241 | 2179549 | 2179806 | + | NZ_CP037951.1 | Parashewanella tropica |
| 242 | 1975068 | 1975325 | - | NZ_CP041036.1 | Shewanella polaris |
| 243 | 2225679 | 2225936 | - | NC_014012.1 | Shewanella violacea DSS12 |
| 244 | 2540013 | 2540270 | - | NZ_CP037952.1 | Parashewanella spongiae |
| 245 | 1613886 | 1614143 | + | NZ_CP007715.1 | Actinobacillus equuli subsp. equuli |
| 246 | 2682440 | 2682697 | + | NZ_CP020472.1 | Shewanella japonica |
| 247 | 706731 | 706988 | - | NZ_CP014782.1 | Shewanella psychrophila |
| 248 | 1549286 | 1549543 | + | NZ_CP030753.1 | Actinobacillus pleuropneumoniae |
| 249 | 1620295 | 1620552 | + | NZ_CP009159.1 | Actinobacillus suis ATCC 33415 |
| 250 | 2076767 | 2077024 | - | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 251 | 654193 | 654450 | + | NZ_CP015425.1 | [Haemophilus] ducreyi |
| 252 | 3001856 | 3002113 | + | NZ_CP034015.1 | Shewanella livingstonensis |
| 253 | 2419230 | 2419487 | - | NC_009901.1 | Shewanella pealeana ATCC 700345 |
| 254 | 1001791 | 1002063 | + | NZ_CP041783.1 | Shewanella donghaensis |
| 255 | 2701056 | 2701313 | + | NC_014541.1 | Ferrimonas balearica DSM 9799 |
| 256 | 1614964 | 1615215 | - | NZ_CP005973.1 | Photobacterium gaetbulicola Gung47 |
| 257 | 2144935 | 2145192 | - | NC_009092.1 | Shewanella loihica PV-4 |
| 258 | 2297449 | 2297706 | + | NZ_CP022272.1 | Shewanella marisflavi |
| 259 | 2343157 | 2343414 | + | NZ_CP034118.1 | Staphylospora marina |
| 260 | 1764855 | 1765115 | - | NC_008148.1 | Rubrobacter xylanophilus DSM 9941 |
| 261 | 1268873 | 1269136 | + | NZ_CP028106.1 | Fusobacterium gonidiaformans ATCC 25563 |
| 262 | 2685124 | 2685390 | - | NZ_CP017269.1 | Geosporobacter ferrireducens |
| 263 | 1504631 | 1504894 | + | NZ_CP028102.1 | Fusobacterium mortiferum ATCC 9817 |
| 264 | 2433561 | 2433827 | - | NZ_LR214441.1 | Tessaracoccus lapidicaptus |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP035688.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00358.22 | 0.98 | 257 | 1830.0 | same-strand | phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 |
| 2 | PF02896.20 | 0.99 | 260 | 51 | same-strand | PEP-utilising enzyme, PEP-binding domain |
| 3 | PF05524.15 | 0.99 | 260 | 50 | same-strand | PEP-utilising enzyme, N-terminal |
| 4 | PF00391.25 | 0.99 | 259 | 50.5 | same-strand | PEP-utilising enzyme, mobile domain |
| 5 | PF00291.27 | 0.76 | 198 | 397 | same-strand | Pyridoxal-phosphate dependent enzyme |
| 6 | PF07264.13 | 0.7 | 184 | 1528 | same-strand | Etoposide-induced protein 2.4 (EI24) |
| 7 | PF04354.15 | 0.7 | 183 | 2524.5 | opposite-strand | ZipA, C-terminal FtsZ-binding domain |
| 8 | PF03120.18 | 0.6 | 158 | 3588 | opposite-strand | NAD-dependent DNA ligase OB-fold domain |
| 9 | PF00533.28 | 0.61 | 159 | 3588.0 | opposite-strand | BRCA1 C Terminus (BRCT) domain |
++ More..