Result : Q9KP46
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Phosphocarrier protein NPr (Nitrogen-related HPr) |
| NCBI Accession ID | AE003852.1 |
| Organism | Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) |
| Left | 2715016 |
| Right | 2715294 |
| Strand | + |
| Nucleotide Sequence | ATGCCGCAACTAAGCCAAACCGTGCTGATCCAAAACCGCCTTGGCCTGCATGCGCGCGCAGCGGTTAAACTGGTGCAACTGGCTCAATCCTTTGATGCAGTATTGACTGTACAGAGTCAAGATGGCCGTGAAGCAACCGCCGACAGTGTGATGGGGTTACTGATGCTGGAATCGGCACAAGGGCAAAACGTGGTGATCTCCGCCGAAGGCTCGCAAGCCGAACAAGCTCTACAAGCGGTTTGTCAGCTTATCGAACAAAAATTTGATGAAGATGAGTAA |
| Sequence | MPQLSQTVLIQNRLGLHARAAVKLVQLAQSFDAVLTVQSQDGREATADSVMGLLMLESAQGQNVVISAEGSQAEQALQAVCQLIEQKFDEDE |
| Source of smORF | Swiss-Prot |
| Function | Component of the phosphoenolpyruvate-dependent nitrogen-metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the phosphoryl carrier protein NPr by enzyme I-Ntr. Phospho-NPr then transfers it to EIIA-Ntr. Could function in the transcriptional regulation of sigma-54 dependent operons in conjunction with the NPr (PtsO) and EIIA-Ntr (PtsN) proteins. {ECO:0000250}. |
| Pubmed ID | 10952301 |
| Domain | CDD:412221 |
| Functional Category | Others |
| Uniprot ID | Q9KP46 |
| ORF Length (Amino Acid) | 92 |
++ More..
| Conservation Analysis |
No. of Species: 206
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 2232619 | 2232897 | + | NZ_CP035688.1 | Vibrio metoecus |
| 2 | 2575211 | 2575489 | + | NZ_AP014524.1 | Vibrio cholerae MS6 |
| 3 | 3068680 | 3068958 | + | NZ_AP014635.1 | Vibrio tritonius |
| 4 | 74440 | 74718 | + | NZ_CP040990.1 | Vibrio furnissii |
| 5 | 3142602 | 3142880 | - | NZ_CP014035.2 | Vibrio fluvialis |
| 6 | 2418566 | 2418844 | + | NZ_CP022741.1 | Vibrio qinghaiensis |
| 7 | 315481 | 315759 | - | NZ_CP009354.1 | Vibrio tubiashii ATCC 19109 |
| 8 | 2652691 | 2652969 | + | NZ_CP016414.1 | Vibrio scophthalmi |
| 9 | 450742 | 451020 | - | NZ_CP046268.1 | Vibrio spartinae |
| 10 | 9835 | 10113 | - | NZ_AP019657.1 | Vibrio ponticus |
| 11 | 2510640 | 2510918 | + | NZ_CP033078.1 | Vibrio zhugei |
| 12 | 2791446 | 2791724 | + | NZ_CP045350.1 | Vibrio aquimaris |
| 13 | 2648697 | 2648936 | + | NZ_AP019651.1 | Vibrio taketomensis |
| 14 | 624382 | 624636 | - | NZ_AP018685.1 | Vibrio rumoiensis |
| 15 | 2800342 | 2800575 | + | NZ_CP030788.1 | Vibrio campbellii |
| 16 | 1837363 | 1837602 | - | NZ_CP065150.1 | Vibrio kanaloae |
| 17 | 363718 | 363957 | - | NZ_CP039700.1 | Vibrio cyclitrophicus |
| 18 | 2004026 | 2004301 | + | NZ_AP018689.1 | Vibrio aphrogenes |
| 19 | 2279921 | 2280154 | - | NZ_CP019959.1 | Vibrio owensii |
| 20 | 3360496 | 3360729 | + | NZ_CP009467.1 | Vibrio harveyi |
| 21 | 245113 | 245367 | - | NZ_CP018312.1 | Vibrio rotiferianus |
| 22 | 2924201 | 2924440 | + | NC_011753.2 | Vibrio atlanticus |
| 23 | 449272 | 449526 | - | NZ_CP031781.1 | Vibrio parahaemolyticus |
| 24 | 874917 | 875171 | - | NC_013456.1 | Vibrio antiquarius |
| 25 | 2701694 | 2701948 | - | NZ_CP025792.1 | Vibrio jasicida 090810c |
| 26 | 2826639 | 2826869 | + | NZ_LT960611.1 | Vibrio tapetis subsp. tapetis |
| 27 | 108911 | 109165 | - | NZ_CP009977.1 | Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 |
| 28 | 388038 | 388313 | - | NZ_CP047475.1 | Vibrio astriarenae |
| 29 | 2216469 | 2216747 | - | NZ_CP046793.1 | Vibrio metschnikovii |
| 30 | 414989 | 415228 | - | NZ_CP032093.1 | Vibrio alfacsensis |
| 31 | 455586 | 455819 | - | NZ_CP044069.1 | Vibrio vulnificus |
| 32 | 555630 | 555908 | - | NC_011312.1 | Aliivibrio salmonicida LFI1238 |
| 33 | 338270 | 338545 | - | NZ_CP071325.1 | Photobacterium ganghwense |
| 34 | 694721 | 694996 | - | NZ_CP005974.1 | Photobacterium gaetbulicola Gung47 |
| 35 | 882180 | 882455 | + | NZ_CP014056.2 | Grimontia hollisae |
| 36 | 674560 | 674832 | - | NZ_CP070624.1 | Photobacterium damselae subsp. damselae |
| 37 | 798296 | 798565 | - | NZ_CP072844.1 | Psychrosphaera aestuarii |
| 38 | 3889903 | 3890172 | + | NC_014541.1 | Ferrimonas balearica DSM 9799 |
| 39 | 367526 | 367756 | - | NZ_CP040021.1 | Salinivibrio kushneri |
| 40 | 3526395 | 3526670 | + | NZ_CP012621.1 | Zobellella denitrificans |
| 41 | 3573058 | 3573336 | + | NC_008709.1 | Psychromonas ingrahamii 37 |
| 42 | 861853 | 862128 | - | NC_016901.1 | Shewanella baltica OS678 |
| 43 | 4507237 | 4507512 | + | NC_010334.1 | Shewanella halifaxensis HAW-EB4 |
| 44 | 340919 | 341194 | + | NZ_CP037951.1 | Parashewanella tropica |
| 45 | 3976566 | 3976841 | + | NZ_CP022358.1 | Shewanella bicestrii |
| 46 | 3666587 | 3666862 | + | NC_008700.1 | Shewanella amazonensis SB2B |
| 47 | 4410427 | 4410702 | + | NC_009901.1 | Shewanella pealeana ATCC 700345 |
| 48 | 3593707 | 3593982 | + | NZ_CP069213.1 | Shewanella litorisediminis |
| 49 | 679227 | 679502 | - | NC_011566.1 | Shewanella piezotolerans WP3 |
| 50 | 2931303 | 2931575 | + | NZ_CP031961.1 | Pseudoalteromonas tunicata |
| 51 | 2994792 | 2995058 | - | NZ_CP034759.1 | Litorilituus sediminis |
| 52 | 955613 | 955843 | + | NZ_CP065640.1 | Serratia rubidaea |
| 53 | 2441810 | 2442040 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 54 | 1284628 | 1284900 | + | NZ_CP019628.1 | Pseudoalteromonas aliena |
| 55 | 329311 | 329541 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 56 | 561825 | 562100 | - | NZ_CP017689.1 | Thalassotalea crassostreae |
| 57 | 338775 | 339005 | - | NC_014500.1 | Dickeya dadantii 3937 |
| 58 | 36178 | 36453 | - | NZ_CP071678.1 | Rhizobium ruizarguesonis |
| 59 | 4244773 | 4245003 | + | NC_012880.1 | Musicola paradisiaca Ech703 |
| 60 | 328648 | 328923 | - | NZ_CP013187.1 | Pseudoalteromonas phenolica |
| 61 | 868538 | 868813 | - | NC_009831.1 | Shewanella sediminis HAW-EB3 |
| 62 | 4017715 | 4017990 | + | NZ_CP041036.1 | Shewanella polaris |
| 63 | 4062921 | 4063151 | + | NZ_CP042220.2 | Dickeya poaceiphila |
| 64 | 4409938 | 4410213 | + | NZ_CP034015.1 | Shewanella livingstonensis |
| 65 | 2702333 | 2702605 | + | NC_007481.1 | Pseudoalteromonas translucida |
| 66 | 2975566 | 2975838 | + | NZ_CP011036.1 | Pseudoalteromonas nigrifaciens |
| 67 | 3405639 | 3405914 | + | NZ_CP020373.1 | Shewanella khirikhana |
| 68 | 3218200 | 3218472 | + | NZ_CP011028.1 | Pseudoalteromonas espejiana DSM 9414 |
| 69 | 1113572 | 1113802 | + | NZ_CP011254.1 | Serratia fonticola |
| 70 | 558779 | 559054 | - | NC_007954.1 | Shewanella denitrificans OS217 |
| 71 | 596823 | 597095 | - | NZ_CP027523.1 | Pseudoalteromonas carrageenovora |
| 72 | 4317523 | 4317753 | + | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 73 | 1144648 | 1144878 | + | NZ_CP023706.1 | Edwardsiella tarda |
| 74 | 487025 | 487255 | - | NZ_CP061511.1 | Mixta calida |
| 75 | 340643 | 340873 | - | NZ_CP025799.1 | Dickeya zeae |
| 76 | 4026162 | 4026437 | + | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 77 | 3928371 | 3928601 | + | NZ_CP050150.1 | Hafnia alvei |
| 78 | 2869144 | 2869416 | + | NZ_CP011039.1 | Pseudoalteromonas spongiae UST010723-006 |
| 79 | 4082105 | 4082335 | + | NC_017554.1 | Pantoea ananatis PA13 |
| 80 | 4505408 | 4505638 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 81 | 5049583 | 5049858 | + | NZ_CP037952.1 | Parashewanella spongiae |
| 82 | 3031839 | 3032111 | + | NZ_CP033065.1 | Pseudoalteromonas agarivorans |
| 83 | 3151081 | 3151353 | + | NZ_CP023464.1 | Pseudoalteromonas atlantica |
| 84 | 2497925 | 2498155 | - | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 85 | 4773084 | 4773314 | + | NZ_LR134494.1 | Serratia quinivorans |
| 86 | 1104392 | 1104622 | + | NZ_CP019706.1 | Pantoea alhagi |
| 87 | 378618 | 378893 | - | NZ_CP028897.1 | Dongshaea marina |
| 88 | 4301806 | 4302078 | + | NZ_CP020472.1 | Shewanella japonica |
| 89 | 3598117 | 3598347 | + | NZ_CP023567.1 | Erwinia pyrifoliae |
| 90 | 449681 | 449911 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 91 | 3122658 | 3122924 | + | NZ_CP067057.1 | Rahnella aceris |
| 92 | 4830671 | 4830901 | + | NC_015567.1 | Serratia plymuthica AS9 |
| 93 | 1555113 | 1555343 | - | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 94 | 2989426 | 2989656 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 95 | 194017 | 194247 | - | NZ_CP015581.1 | Tatumella citrea |
| 96 | 4721195 | 4721425 | + | NZ_CP048784.1 | Serratia liquefaciens |
| 97 | 386483 | 386713 | - | NZ_LT615367.1 | Dickeya aquatica |
| 98 | 4229907 | 4230137 | + | NZ_CP006569.1 | Sodalis praecaptivus |
| 99 | 373340 | 373570 | - | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 100 | 487313 | 487543 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 101 | 503765 | 503995 | - | NZ_LN907827.1 | Erwinia gerundensis |
| 102 | 3170889 | 3171155 | + | NZ_CP016043.1 | Edwardsiella hoshinae |
| 103 | 1267550 | 1267780 | + | NZ_CP047495.1 | Pectobacterium brasiliense |
| 104 | 678209 | 678439 | - | NZ_CP011025.1 | Pseudoalteromonas arctica A 37-1-2 |
| 105 | 561792 | 562022 | - | NZ_CP026377.1 | Mixta gaviniae |
| 106 | 417230 | 417502 | - | NZ_CP011041.1 | Pseudoalteromonas tetraodonis |
| 107 | 460458 | 460730 | - | NZ_CP011030.1 | Pseudoalteromonas issachenkonii |
| 108 | 914474 | 914710 | - | NZ_CP014322.1 | Alteromonas addita |
| 109 | 3243750 | 3243980 | - | NZ_CP014136.1 | Gibbsiella quercinecans |
| 110 | 1575548 | 1575826 | + | NZ_CP020465.1 | Cognaticolwellia beringensis |
| 111 | 3300218 | 3300454 | + | NC_015554.1 | Alteromonas naphthalenivorans |
| 112 | 3713866 | 3714096 | + | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 113 | 3589172 | 3589402 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 114 | 858264 | 858509 | - | NZ_CP008849.1 | Alteromonas australica |
| 115 | 1151737 | 1151967 | + | NZ_CP042941.1 | Atlantibacter hermannii |
| 116 | 2272870 | 2273136 | - | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 117 | 561260 | 561526 | - | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 118 | 526101 | 526331 | - | NZ_CP071320.1 | Serratia ureilytica |
| 119 | 4663702 | 4663932 | + | NZ_CP038662.1 | Serratia nematodiphila |
| 120 | 3673848 | 3674078 | + | NZ_CP045720.1 | Pantoea eucalypti |
| 121 | 4505439 | 4505669 | + | NZ_CP051652.1 | Pectobacterium carotovorum |
| 122 | 339832 | 340062 | - | NZ_CP034938.1 | Pectobacterium odoriferum |
| 123 | 4105801 | 4106031 | - | NZ_CP017482.1 | Pectobacterium polaris |
| 124 | 350602 | 350832 | - | NZ_CP038498.1 | Pectobacterium punjabense |
| 125 | 3881012 | 3881242 | + | NZ_CP016948.1 | Serratia surfactantfaciens |
| 126 | 437600 | 437830 | - | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 127 | 406031 | 406261 | - | NZ_CP034148.1 | Pantoea agglomerans |
| 128 | 3664508 | 3664738 | + | NZ_CP038853.1 | Pantoea vagans |
| 129 | 5856702 | 5856977 | + | NZ_CP014782.1 | Shewanella psychrophila |
| 130 | 468632 | 468862 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 131 | 3340176 | 3340406 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 132 | 3348008 | 3348238 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 133 | 4090489 | 4090719 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 134 | 2105669 | 2105899 | - | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 135 | 2661899 | 2662171 | + | NZ_CP029347.1 | Saliniradius amylolyticus |
| 136 | 1920044 | 1920274 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 137 | 4095996 | 4096226 | + | NZ_AP022508.1 | Enterobacter bugandensis |
| 138 | 4171082 | 4171312 | + | NZ_CP027986.1 | Enterobacter sichuanensis |
| 139 | 3325922 | 3326152 | - | NZ_CP049115.1 | Pantoea stewartii |
| 140 | 4184966 | 4185196 | + | NZ_CP017184.1 | Enterobacter roggenkampii |
| 141 | 4181966 | 4182196 | + | NC_015968.1 | Enterobacter soli |
| 142 | 3120162 | 3120392 | - | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 143 | 4290935 | 4291165 | + | NZ_CP009756.1 | Enterobacter cloacae |
| 144 | 4217133 | 4217363 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 145 | 4166465 | 4166695 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 146 | 4524982 | 4525212 | + | NZ_CP043318.1 | Enterobacter chengduensis |
| 147 | 323769 | 323999 | - | NZ_LR134201.1 | Cedecea lapagei |
| 148 | 320536 | 320766 | - | NZ_CP023525.1 | Cedecea neteri |
| 149 | 625256 | 625486 | + | NZ_CP040428.1 | Jejubacter calystegiae |
| 150 | 452757 | 452987 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 151 | 4626096 | 4626326 | + | NZ_LT906479.1 | Serratia ficaria |
| 152 | 337352 | 337582 | - | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 153 | 2610660 | 2610890 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 154 | 4360724 | 4360954 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 155 | 4788099 | 4788329 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 156 | 3954682 | 3954957 | + | NC_009092.1 | Shewanella loihica PV-4 |
| 157 | 1075779 | 1076009 | - | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 158 | 5238569 | 5238799 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 159 | 1020762 | 1021034 | + | NZ_CP020538.1 | Sphingobium herbicidovorans |
| 160 | 966521 | 966793 | - | NC_016041.1 | Glaciecola nitratireducens FR1064 |
| 161 | 357508 | 357738 | - | NZ_CP046293.1 | Yersinia intermedia |
| 162 | 518629 | 518901 | - | NZ_CP032090.1 | Pseudoalteromonas donghaensis |
| 163 | 2272670 | 2272900 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 164 | 3743862 | 3744092 | + | NZ_CP015749.1 | Pectobacterium parmentieri |
| 165 | 3415478 | 3415744 | + | NZ_CP036536.1 | Salinimonas lutimaris |
| 166 | 1053636 | 1053866 | + | NZ_CP007230.1 | Yersinia similis |
| 167 | 4322895 | 4323125 | - | NZ_CP028271.1 | Mixta intestinalis |
| 168 | 3707377 | 3707652 | + | NZ_CP022272.1 | Shewanella marisflavi |
| 169 | 2205631 | 2205861 | + | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 170 | 677251 | 677481 | + | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 171 | 4165854 | 4166084 | + | NZ_CP043727.1 | Yersinia canariae |
| 172 | 523934 | 524164 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 173 | 4227764 | 4227994 | + | NZ_CP032487.1 | Yersinia hibernica |
| 174 | 843168 | 843443 | - | NZ_CP046378.1 | Shewanella algae |
| 175 | 4089561 | 4089791 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 176 | 4798082 | 4798318 | + | NC_003910.7 | Colwellia psychrerythraea 34H |
| 177 | 535938 | 536168 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 178 | 386926 | 387156 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 179 | 347186 | 347416 | + | NZ_CP020388.1 | Pluralibacter gergoviae |
| 180 | 5144538 | 5144813 | + | NC_010506.1 | Shewanella woodyi ATCC 51908 |
| 181 | 3520176 | 3520454 | + | NZ_CP031416.1 | Gallaecimonas mangrovi |
| 182 | 2870096 | 2870398 | - | NZ_CP022110.1 | Nitrospirillum amazonense CBAmc |
| 183 | 1884063 | 1884365 | + | NC_023065.1 | Magnetospirillum gryphiswaldense MSR-1 v2 |
| 184 | 4597032 | 4597262 | + | NZ_CP065044.1 | Pectobacterium aroidearum |
| 185 | 498240 | 498470 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 186 | 555589 | 555819 | - | NZ_CP013990.1 | Leclercia adecarboxylata |
| 187 | 4187406 | 4187684 | - | NZ_HG938353.1 | Neorhizobium galegae bv. orientalis str. HAMBI 540 |
| 188 | 4872207 | 4872437 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 189 | 709448 | 709720 | - | NZ_CP046670.1 | Alteromonas mediterranea |
| 190 | 1177733 | 1177978 | + | NZ_CP052766.1 | Alteromonas pelagimontana |
| 191 | 1789382 | 1789633 | - | NZ_CP072425.1 | Pseudoalteromonas viridis |
| 192 | 214918 | 215148 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 193 | 604762 | 605028 | - | NC_015186.1 | Acidiphilium multivorum AIU301 |
| 194 | 192945 | 193175 | - | NZ_CP027850.1 | Caulobacter segnis |
| 195 | 2204453 | 2204728 | - | NZ_CP021377.1 | Oceanisphaera profunda |
| 196 | 2630676 | 2630951 | - | NZ_CP021376.1 | Oceanisphaera avium |
| 197 | 34856 | 35131 | - | NZ_CP071612.1 | Rhizobium bangladeshense |
| 198 | 4305484 | 4305759 | + | NZ_CP054027.1 | Rhizobium hidalgonense |
| 199 | 35880 | 36155 | - | NZ_CP071604.1 | Rhizobium binae |
| 200 | 37252 | 37527 | - | NZ_CP013532.1 | Rhizobium phaseoli |
| 201 | 1599317 | 1599586 | + | NZ_CP036200.1 | Shewanella maritima |
| 202 | 2649259 | 2649534 | + | NZ_CP054021.1 | Rhizobium indicum |
| 203 | 35702 | 35977 | - | NZ_CP020906.1 | Rhizobium etli |
| 204 | 35820 | 36095 | - | NZ_CP013500.1 | Rhizobium esperanzae |
| 205 | 4192537 | 4192812 | - | NZ_CP034998.1 | Rhizobium acidisoli |
| 206 | 1853668 | 1853943 | - | NZ_CP071454.1 | Rhizobium lentis |
| 207 | 2604811 | 2605083 | + | NZ_CP029479.1 | Phenylobacterium parvum |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP035688.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00005.29 | 0.91 | 188 | 3304 | same-strand | ABC transporter |
| 2 | PF12399.10 | 0.91 | 187 | 3304.0 | same-strand | Branched-chain amino acid ATP-binding cassette transporter |
| 3 | PF04552.15 | 0.92 | 189 | 1819.5 | same-strand | Sigma-54, DNA binding domain |
| 4 | PF04963.15 | 0.92 | 189 | 1819.5 | same-strand | Sigma-54 factor, core binding domain |
| 5 | PF00309.22 | 0.9 | 186 | 1819 | same-strand | Sigma-54 factor, Activator interacting domain (AID) |
| 6 | PF02482.21 | 0.91 | 187 | 1508.5 | same-strand | Sigma 54 modulation protein / S30EA ribosomal protein |
| 7 | PF00359.24 | 0.89 | 184 | 939.0 | same-strand | Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 |
| 8 | PF03668.17 | 0.93 | 192 | 39 | same-strand | P-loop ATPase protein family |
++ More..