ProsmORF-pred
Result : Q9KGI8
Protein Information
Information Type Description
Protein name Uncharacterized protein BH0073
NCBI Accession ID BA000004.3
Organism Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Left 92524
Right 92790
Strand +
Nucleotide Sequence ATGAGACTCGATAAATTTTTAAAAGTTTCCCGGTTAATTAAACGGAGAACATTGGCGAAAGAAGTTTGTGAACAAGGTAGAATTACGGTCAATGGAAACGTAGCAAAAGCAGGGACTGTCGTGAAGGAAGGGGATGAGCTTGTGATTCGTTTCGGTCAAAAGCTTGTCACTGTTGAAATTACAAATGTGAAAGAAACGGTTCGGAAAGAAGAAGCAAGCACGTTATATGAAGTAAAAAAAGAAGAGCCAATTTCTAAAAGTGAGTAA
Sequence MRLDKFLKVSRLIKRRTLAKEVCEQGRITVNGNVAKAGTVVKEGDELVIRFGQKLVTVEITNVKETVRKEEASTLYEVKKEEPISKSE
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl09940. Profile Description: N/A. This domain is found at the C-terminus of fungal tyrosyl-tRNA synthetases. It binds to group I introns.
Pubmed ID 11058132
Domain CDD:415814
Functional Category RNA-binding
Uniprot ID Q9KGI8
ORF Length (Amino Acid) 88
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 443
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 92524 92790 + NC_002570.2 Alkalihalobacillus halodurans C-125
2 73836 74108 + NC_013791.2 Alkalihalobacillus pseudofirmus OF4
3 65452 65709 + NZ_CP024848.1 Oceanobacillus zhaokaii
4 2235725 2235991 - NZ_LR134242.1 Staphylococcus warneri
5 1129789 1130046 - NZ_CP022315.1 Virgibacillus phasianinus
6 1980047 1980310 + NZ_CP022096.2 Staphylococcus pettenkoferi
7 82936 83199 + NZ_CP041666.1 Radiobacillus deserti
8 3199087 3199362 + NZ_CP064060.1 Anoxybacillus caldiproteolyticus
9 2148371 2148628 - NZ_CP008876.1 Terribacillus goriensis
10 1693605 1693871 + NC_022737.1 Staphylococcus pasteuri SP1
11 61657 61947 + NZ_CP016540.2 Planococcus versutus
12 4607604 4607894 - NZ_CP014616.1 Sporosarcina psychrophila
13 1444829 1445089 - NZ_CP018622.1 Virgibacillus dokdonensis
14 78874 79134 + NZ_CP009416.1 Jeotgalibacillus malaysiensis
15 68880 69170 + NZ_CP016534.2 Planococcus antarcticus DSM 14505
16 2441840 2442103 - NZ_AP018587.1 Staphylococcus caprae
17 2300092 2300355 + NZ_CP007601.1 Staphylococcus capitis subsp. capitis
18 417056 417328 - NZ_CP070511.1 Parageobacillus toebii
19 76393 76650 + NC_017668.1 Halobacillus halophilus DSM 2266
20 1076701 1076964 + NZ_CP066042.1 Staphylococcus saccharolyticus
21 65695 65961 + NZ_CP065425.1 Heyndrickxia vini
22 3862362 3862622 - NZ_CP011937.1 Bacillus velezensis
23 67575 67835 + NZ_CP051464.1 Bacillus mojavensis
24 75378 75641 + NZ_LT603683.1 Bacillus glycinifermentans
25 123885 124142 - NZ_CP020772.1 Halobacillus mangrovi
26 72652 72915 + NC_006270.3 Bacillus licheniformis DSM 13 = ATCC 14580
27 99279 99542 + NZ_CP023665.1 Bacillus paralicheniformis
28 68921 69181 + NZ_CP053376.1 Bacillus amyloliquefaciens
29 65311 65577 + NC_018704.1 Amphibacillus xylanus NBRC 15112
30 78306 78566 + NZ_CP017962.1 Virgibacillus halodenitrificans
31 1825217 1825483 - NZ_CP041305.1 Cytobacillus ciccensis
32 1941589 1941849 - NZ_CP029364.1 Bacillus halotolerans
33 67759 68019 + NZ_CP048852.1 Bacillus tequilensis
34 48143 48403 + NZ_CP013984.1 Bacillus inaquosorum
35 67877 68137 + NC_000964.3 Bacillus subtilis subsp. subtilis str. 168
36 2318439 2318702 - NZ_CP035288.1 Staphylococcus epidermidis
37 1694673 1694963 - NZ_CP013661.2 Planococcus kocurii
38 67907 68197 + NZ_CP019401.1 Planococcus faecalis
39 548882 549154 - NZ_CP016622.1 Parageobacillus thermoglucosidasius
40 203715 203975 + NZ_CP033052.1 Bacillus vallismortis
41 1478273 1478533 - NZ_CP043404.1 Bacillus safensis
42 192307 192585 + NZ_CP013911.1 Staphylococcus haemolyticus
43 67568 67828 + NZ_CP034943.1 Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499
44 119960 120235 - NZ_CP015438.1 Anoxybacillus amylolyticus
45 46946 47206 + NZ_CP011150.1 Bacillus altitudinis
46 240073 240330 - NZ_CP022437.1 Virgibacillus necropolis
47 65423 65713 + NZ_CP016538.2 Planococcus maritimus
48 64880 65170 + NZ_CP016539.2 Planococcus plakortidis
49 3253392 3253682 + NZ_CP013659.2 Planococcus rifietoensis
50 80680 80937 + NZ_CP029797.1 Paraliobacillus zengyii
51 289779 290042 + NZ_CP013114.1 Staphylococcus equorum
52 497727 497990 + NZ_LT906460.1 Staphylococcus simiae
53 65310 65600 + NZ_CP059540.1 Planococcus maritimus
54 2436470 2436733 - NZ_CP008724.1 Staphylococcus xylosus
55 4120014 4120277 - NZ_CP016020.1 Bacillus weihaiensis
56 62422 62697 + NZ_CP024109.1 Bacillus cytotoxicus
57 2635241 2635504 - NZ_CP011361.2 Salimicrobium jeotgali
58 90085 90375 + NZ_CP006837.1 Lysinibacillus varians
59 4631417 4631707 - NZ_CP019980.1 Lysinibacillus sphaericus
60 3872412 3872702 + NZ_CP038015.1 Paenisporosarcina antarctica
61 333884 334147 + NZ_CP065712.1 Staphylococcus auricularis
62 3163288 3163563 - NZ_CP014342.1 Geobacillus subterraneus
63 1259699 1259977 - NZ_CP014022.1 Staphylococcus lugdunensis
64 966698 966970 - NZ_CP034248.1 Paenibacillus lentus
65 709667 709945 + NZ_CP013023.1 Paenibacillus bovis
66 2759759 2760040 + NZ_CP061470.1 Geobacillus zalihae
67 4126754 4127032 - NZ_CP014167.1 Paenibacillus yonginensis
68 729458 729739 - NZ_CP033732.1 Staphylococcus hominis
69 206451 206732 - NZ_CP018058.1 Geobacillus thermocatenulatus
70 67960 68223 + NC_004193.1 Oceanobacillus iheyensis HTE831
71 2329914 2330195 - NZ_CP061472.1 Geobacillus thermoleovorans
72 1006401 1006691 + NZ_CP053988.1 Abiotrophia defectiva
73 2309665 2309928 - NZ_LR134089.1 Staphylococcus saprophyticus
74 62046 62321 + NC_007530.2 Bacillus anthracis str. 'Ames Ancestor'
75 61932 62207 + NC_011725.1 Bacillus cereus B4264
76 61674 61949 + NZ_CP032365.1 Bacillus wiedmannii
77 1550136 1550399 + NZ_CP063356.1 Anaerobacillus isosaccharinicus
78 66159 66440 + NC_006510.1 Geobacillus kaustophilus HTA426
79 1561320 1561580 - NZ_CP017786.1 Bacillus xiamenensis
80 65889 66161 + NC_010556.1 Exiguobacterium sibiricum 255-15
81 2513329 2513592 + NZ_CP030926.1 Peribacillus butanolivorans
82 2500297 2500560 - NZ_CP017704.1 Peribacillus simplex NBRC 15720 = DSM 1321
83 121938 122222 - NZ_CP039710.1 Thermoactinomyces vulgaris
84 5057597 5057872 - NZ_CP040336.1 Bacillus luti
85 4765034 4765324 - NZ_CP010820.1 Lysinibacillus fusiformis
86 61911 62168 + NZ_CP012152.1 Anoxybacillus gonensis
87 5329492 5329770 - NZ_CP045293.1 Paenibacillus guangzhouensis
88 61699 61974 + NZ_CP064875.1 Bacillus toyonensis
89 67221 67511 + NZ_CP016537.2 Planococcus halocryophilus
90 68734 69000 + NZ_CP042593.1 Bacillus dafuensis
91 2486460 2486726 - NZ_CP018776.1 Staphylococcus condimenti
92 77002 77262 + NC_014829.1 Evansella cellulosilytica DSM 2522
93 52721 52996 + NZ_CP034346.1 Paenibacillus lutimineralis
94 87293 87583 + NZ_CP016543.2 Planococcus donghaensis
95 3838580 3838858 + NZ_CP054614.1 Paenibacillus barcinonensis
96 1609287 1609550 - NZ_CP018199.1 Staphylococcus succinus
97 2291548 2291817 - NZ_CP054482.1 Macrococcus bohemicus
98 88972 89262 + NZ_CP034118.1 Staphylospora marina
99 2308783 2309046 - NZ_CP064056.1 Staphylococcus lloydii
100 1650234 1650512 + NC_016641.1 Paenibacillus terrae HPL-003
101 1103327 1103590 + NZ_CP017703.1 Aeribacillus pallidus
102 182828 183085 + NZ_CP053989.1 Niallia circulans
103 66343 66609 + NZ_CP023704.1 Caldibacillus thermoamylovorans
104 69616 69906 + NZ_CP031223.1 Psychrobacillus glaciei
105 2329555 2329833 + NZ_CP045298.1 Paenibacillus brasilensis
106 5605521 5605799 - NZ_CP020028.1 Paenibacillus kribbensis
107 1775708 1775998 - NZ_CP015108.1 Sporosarcina ureae
108 3730112 3730390 - NZ_CP045295.1 Paenibacillus cellulositrophicus
109 444445 444699 - NZ_CP027770.1 Staphylococcus felis
110 284745 285008 + NZ_CP011102.1 Listeria weihenstephanensis
111 52022 52288 - NZ_CP033460.1 Staphylococcus debuckii
112 2230589 2230882 + NZ_CP017705.1 Brevibacillus laterosporus DSM 25
113 69833 70099 + NZ_CP024035.1 Priestia aryabhattai
114 170793 171050 + NZ_LT906464.1 Staphylococcus muscae
115 255959 256252 - NZ_AP017312.1 Aneurinibacillus soli
116 4666142 4666411 + NZ_CP018866.1 Sutcliffiella cohnii
117 72002 72262 + NZ_CP012024.1 Bacillus smithii
118 63189 63467 + NZ_CP009428.1 Paenibacillus odorifer
119 1963281 1963559 + NZ_CP048429.1 Paenibacillus jilunlii
120 51023 51301 + NZ_CP009287.1 Paenibacillus graminis
121 54364 54642 + NZ_CP009286.1 Paenibacillus stellifer
122 492402 492665 + NZ_LR134304.1 Staphylococcus schweitzeri
123 51250 51528 + NZ_CP009285.1 Paenibacillus borealis
124 143183 143476 + NZ_LR134338.1 Brevibacillus brevis
125 881333 881605 - NZ_CP043611.1 Paenibacillus antarcticus
126 51029 51307 + NZ_CP009288.1 Paenibacillus durus
127 50645 50923 + NZ_CP004078.1 Paenibacillus sabinae T27
128 3162951 3163229 - NZ_CP016809.1 Paenibacillus ihbetae
129 71202 71471 + NC_022524.1 Bacillus infantis NRRL B-14911
130 57139 57405 + NZ_CP015378.1 Fictibacillus phosphorivorans
131 1923215 1923493 + NZ_CP068595.1 Paenibacillus sonchi
132 51050 51328 + NZ_LN831776.1 Paenibacillus riograndensis SBR5
133 262169 262435 + NZ_CP009577.1 Listeria ivanovii subsp. ivanovii
134 2609538 2609795 - NZ_CP013862.1 Lentibacillus amyloliquefaciens
135 1280372 1280635 + NC_010337.2 Heliomicrobium modesticaldum Ice1
136 3160957 3161232 - NZ_CP035492.1 Paenibacillus protaetiae
137 1497436 1497708 - NZ_CP011388.1 Paenibacillus swuensis
138 200940 201197 + NZ_CP045927.1 Staphylococcus agnetis
139 189274 189531 + NC_014925.1 Staphylococcus pseudintermedius HKU10-03
140 179096 179362 + NZ_LT906444.1 Listeria welshimeri
141 2763444 2763707 - NZ_CP068053.1 Peribacillus psychrosaccharolyticus
142 2022498 2022761 - NZ_CP022983.1 Cytobacillus kochii
143 2593111 2593389 + NZ_CP041217.1 Saccharibacillus brassicae
144 208242 208508 + NC_013891.1 Listeria seeligeri serovar 1/2b str. SLCC3954
145 222995 223261 + NC_003210.1 Listeria monocytogenes EGD-e
146 218237 218494 + NZ_CP019659.1 Paenibacillus larvae subsp. larvae
147 2719883 2720140 - NZ_CP038012.1 Sporosarcina pasteurii
148 479937 480200 + NC_007795.1 Staphylococcus aureus subsp. aureus NCTC 8325
149 434189 434485 - NZ_CP026363.1 Brevibacillus agri
150 58214 58480 + NZ_CP019699.1 Novibacillus thermophilus
151 2253680 2253940 + NZ_CP009709.1 Weizmannia coagulans DSM 1 = ATCC 7050
152 5280419 5280703 - NZ_AP019308.1 Paenibacillus baekrokdamisoli
153 2501292 2501558 + NZ_CP045875.1 Heliorestis convoluta
154 2297079 2297336 - NZ_CP008747.1 Staphylococcus hyicus
155 128594 128872 + NZ_CP048103.1 Kroppenstedtia eburnea
156 3512823 3513089 - NZ_CP012502.1 Bacillus beveridgei
157 2368915 2369181 - NZ_CP022046.2 Mammaliicoccus sciuri
158 2357601 2357867 + NZ_CP068061.1 Mammaliicoccus vitulinus
159 161763 162020 - NZ_CP017560.1 Sporosarcina ureilytica
160 4509924 4510202 + NZ_CP013652.1 Paenibacillus naphthalenovorans
161 8447024 8447302 - NC_017672.3 Paenibacillus mucilaginosus K02
162 1379804 1380073 - NZ_CP011403.1 Ligilactobacillus salivarius str. Ren
163 201599 201862 + NZ_LR134483.1 Listeria grayi
164 806611 806877 + NZ_CP029684.2 Oenococcus sicerae
165 823744 824043 - NZ_CP053187.1 Turicibacter sanguinis
166 4293947 4294231 + NZ_CP033433.1 Cohnella candidum
167 7112719 7112997 + NZ_CP021780.1 Paenibacillus donghaensis
168 2330858 2331130 + NZ_CP011058.1 Paenibacillus beijingensis
169 558507 558767 + NZ_CP014176.1 Clostridium argentinense
170 3086253 3086492 - NZ_CP036345.1 Anaerostipes caccae L1-92
171 2127416 2127661 + NZ_CP034413.2 Dysosmobacter welbionis
172 701099 701359 + NZ_CP026520.1 Paenibacillus chitinolyticus
173 3442711 3443004 - NC_006177.1 Symbiobacterium thermophilum IAM 14863
174 3556554 3556835 - NZ_CP048286.1 Paenibacillus rhizovicinus
175 589850 590104 + NZ_CP044499.1 Lapidilactobacillus dextrinicus
176 1673120 1673386 - NZ_CP065729.1 Macrococcus caseolyticus
177 394229 394507 + NZ_CP014164.1 Aerococcus viridans
178 1800907 1801185 - NZ_CP013988.1 Aerococcus urinaeequi
179 3434318 3434581 - NZ_CP040924.1 Clostridium thermarum
180 2278060 2278326 - NZ_CP047361.1 Macrococcus canis
181 848402 848680 + NZ_CP034437.1 Paenibacillus albus
182 81750 81995 + NZ_AP021853.1 Sporolactobacillus terrae
183 110186 110449 + NZ_CP048104.1 Kroppenstedtia pulmonis
184 231636 231914 + NZ_CP048209.1 Paenibacillus lycopersici
185 2690642 2690917 - NZ_CP011366.1 Salinicoccus halodurans
186 1491946 1492203 + NZ_CP020773.1 Staphylococcus lutrae
187 3924928 3925206 - NC_019897.1 Thermobacillus composti KWC4
188 1271403 1271642 + NZ_CP036170.1 [Clostridium] scindens ATCC 35704
189 370732 370971 + NZ_CP040058.1 Anaerostipes rhamnosivorans
190 65137 65403 + NZ_LS483476.1 Lederbergia lentus
191 126369 126638 - NZ_CP014912.1 Secundilactobacillus paracollinoides
192 4468186 4468485 - NZ_CP022657.1 Tumebacillus algifaecis
193 205196 205498 + NC_013205.1 Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
194 1447120 1447410 + NC_014136.1 Leuconostoc kimchii IMSNU 11154
195 1341081 1341362 - NZ_CP028251.1 Leuconostoc mesenteroides
196 356016 356297 + NZ_CP015247.1 Leuconostoc suionicum
197 10339 10611 + NZ_CP065061.1 Streptococcus equi subsp. zooepidemicus
198 1055045 1055314 + NZ_CP022121.1 Dehalobacterium formicoaceticum
199 2410193 2410483 - NZ_CP023434.1 Suicoccus acidiformans
200 1677177 1677476 + NZ_CP021434.1 Tumebacillus avium
201 2496664 2496927 - NZ_LS991421.1 Lacticaseibacillus zeae
202 434584 434868 + NC_018631.1 Leuconostoc gelidum JB7
203 30825 31100 - NZ_CP060720.1 Vagococcus carniphilus
204 1532711 1532998 - NZ_CP027226.1 Fastidiosipila sanguinis
205 1220110 1220382 - NZ_LR134341.1 Streptococcus pseudoporcinus
206 576226 576507 + NZ_CP032757.1 Lactiplantibacillus pentosus
207 1552085 1552354 - NZ_LN898144.1 Paucilactobacillus oligofermentans DSM 15707 = LMG 22743
208 10283 10555 + NZ_LR594050.1 Streptococcus porcinus
209 658787 659065 - NZ_CP042374.1 Leuconostoc carnosum
210 2494158 2494421 - NZ_AP012544.1 Lacticaseibacillus casei DSM 20011 = JCM 1134 = ATCC 393
211 429301 429579 + NZ_AP014680.1 Paucilactobacillus hokkaidonensis JCM 18461
212 167434 167694 + NZ_CP014324.1 Oenococcus oeni
213 2854008 2854250 + NZ_CP045798.1 Thermoanaerosceptrum fracticalcis
214 1535149 1535421 - NZ_CP061835.1 Weissella viridescens
215 793148 793435 + NZ_CP015196.1 Streptococcus marmotae
216 2146229 2146492 - NZ_CP035485.1 Salicibibacter halophilus
217 309275 309538 + NZ_CP034235.1 Paenibacillus psychroresistens
218 3162177 3162443 - NC_020995.1 Enterococcus casseliflavus EC20
219 4625732 4625992 - NZ_CP015756.1 Clostridium estertheticum subsp. estertheticum
220 9685 9975 - NZ_CP022680.1 Streptococcus respiraculi
221 174768 175028 + NZ_CP016786.1 Clostridium isatidis
222 3493094 3493333 - NC_014387.1 Butyrivibrio proteoclasticus B316
223 184973 185221 + NC_009633.1 Alkaliphilus metalliredigens QYMF
224 2100066 2100338 + NZ_CP014699.1 Streptococcus pantholopis
225 205744 206001 + NZ_CP014204.2 Clostridium baratii
226 74710 74991 + NZ_AP019400.1 Cohnella abietis
227 2134866 2135144 - NZ_CP027563.1 Weissella confusa
228 9785 10057 + NC_012924.1 Streptococcus suis SC84
229 839417 839671 - NZ_CP014163.1 Aerococcus urinaehominis
230 204941 205198 + NZ_CP007452.1 Peptoclostridium acidaminophilum DSM 3953
231 1493684 1493962 - NZ_CP017326.1 Weissella soli
232 145686 145946 + NC_022571.1 Clostridium saccharobutylicum DSM 13864
233 2424940 2425179 + NZ_CP070062.1 Coprococcus comes
234 812105 812377 + NZ_CP054015.1 Streptococcus gallolyticus
235 11840 12112 + NZ_LR594046.1 Streptococcus dysgalactiae
236 345155 345424 + NZ_CP047141.1 Ligilactobacillus animalis
237 18934 19203 + NC_022369.1 Lactococcus lactis subsp. cremoris KW2
238 3158916 3159155 + NZ_LT635479.1 Lachnoclostridium phocaeense
239 2319933 2320199 - NZ_LT906462.1 Mammaliicoccus stepanovicii
240 1987573 1987845 + NZ_LT906439.1 Streptococcus merionis
241 454458 454700 - NZ_CP018888.1 Amylolactobacillus amylophilus DSM 20533 = JCM 1125
242 132047 132328 + NZ_CP030105.1 Lactiplantibacillus plantarum
243 1267118 1267390 + NZ_CP059603.1 Levilactobacillus suantsaii
244 2290010 2290288 + NZ_CP031092.1 Salicibibacter kimchii
245 1103853 1104128 - NZ_CP037940.1 Weissella cryptocerci
246 2174170 2174436 - NZ_LR594049.1 Streptococcus gordonii
247 1946526 1946798 + NZ_CP018796.1 Lentilactobacillus parabuchneri
248 10226 10498 + NZ_CP029491.1 Streptococcus sobrinus
249 567356 567628 - NZ_LR134293.1 Streptococcus canis
250 448951 449223 - NZ_CP012033.1 Levilactobacillus koreensis
251 8906 9178 + NZ_CP010450.1 Streptococcus pyogenes
252 223300 223569 + NZ_CP070872.1 Lactococcus taiwanensis
253 3610848 3611108 - NZ_CP030775.1 Clostridium butyricum
254 1688829 1689068 + NZ_LT990039.1 Massilistercora timonensis
255 2377827 2378066 - NZ_CP047602.1 Thermoanaerobacterium aotearoense
256 1519264 1519542 + NZ_CP018906.1 Lentilactobacillus curieae
257 117805 118065 + NZ_CP043998.1 Clostridium diolis
258 269255 269494 + NZ_CP016502.1 Acetivibrio thermocellus DSM 2360
259 2641751 2642032 - NZ_CP016843.1 Carnobacterium divergens
260 161628 161888 + NZ_CP017253.2 Clostridium taeniosporum
261 283178 283417 + NZ_CP022464.2 Enterocloster bolteae
262 115493 115771 + NZ_CP014332.1 Weissella jogaejeotgali
263 17140 17412 + NZ_CP039457.1 Streptococcus pasteurianus
264 90585 90845 + NZ_CP017267.1 Vagococcus teuberi
265 945686 945961 - NZ_CP049887.1 Vagococcus hydrophili
266 181870 182112 + NC_015589.1 Desulfotomaculum ruminis DSM 2154
267 9388 9663 + NZ_LR134275.1 Streptococcus vestibularis
268 819086 819361 + NZ_CP040586.1 Furfurilactobacillus rossiae
269 3266683 3266952 + NZ_CP068170.1 Erysipelatoclostridium ramosum
270 94359 94601 + NZ_CP031513.1 Bombilactobacillus bombi
271 587574 587840 - NZ_CP016953.1 Streptococcus himalayensis
272 13869 14141 + NZ_AP018400.1 Streptococcus ruminantium
273 116845 117087 + NZ_CP020559.1 Clostridium formicaceticum
274 9931 10203 + NZ_LS483403.1 Streptococcus lutetiensis
275 1935709 1935969 + NZ_CP023671.1 Clostridium septicum
276 171111 171371 + NZ_CP027286.1 Clostridium chauvoei
277 852684 852959 + NZ_CP023011.2 Enterococcus hirae
278 9734 10006 + NZ_CP025536.1 Streptococcus pluranimalium
279 1449228 1449497 + NZ_CP012294.1 Pediococcus damnosus
280 146657 146917 + NZ_LS483306.1 Enterococcus cecorum
281 1646091 1646357 + NZ_CP049889.1 Jeotgalibaca porci
282 3059073 3059333 - NC_008261.1 Clostridium perfringens ATCC 13124
283 618041 618313 + NZ_LS483405.1 Levilactobacillus brevis
284 2831512 2831787 - NZ_CP018061.1 Enterococcus mundtii
285 2812110 2812349 - NZ_CP030280.1 Blautia argi
286 4403451 4403690 - NC_014376.1 [Clostridium] saccharolyticum WM1
287 8321 8587 + NZ_LR134336.1 Streptococcus oralis ATCC 35037
288 301202 301474 + NZ_CP045605.1 Limosilactobacillus reuteri
289 2078513 2078755 - NZ_CP048649.1 Aminipila butyrica
290 8653 8928 + NC_017581.1 Streptococcus thermophilus JIM 8232
291 11855 12127 + NZ_CP031733.1 Streptococcus chenjunshii
292 123170 123412 + NC_009253.1 Desulfotomaculum reducens MI-1
293 114460 114702 + NZ_CP009687.1 Clostridium aceticum
294 8840 9106 + NZ_CP034543.1 Streptococcus periodonticum
295 1538501 1538779 - NZ_CP023501.1 Weissella paramesenteroides
296 1492205 1492444 + NZ_CP048000.1 Anaerocolumna sedimenticola
297 1546700 1546981 - NZ_CP014161.1 Aerococcus urinae
298 187369 187608 + NZ_LN879430.1 Herbinix luporum
299 559010 559276 - NZ_CP032620.1 Streptococcus koreensis
300 1236977 1237222 + NZ_CP023643.1 Brochothrix thermosphacta
301 8324 8590 + NC_015875.1 Streptococcus pseudopneumoniae IS7493
302 615987 616226 + NZ_CP061336.1 Ruminiclostridium herbifermentans
303 127176 127436 + NC_020291.1 Clostridium saccharoperbutylacetonicum N1-4(HMT)
304 2461716 2461985 - NC_020207.1 Enterococcus faecium ATCC 8459 = NRRL B-2354
305 2514245 2514514 - NZ_CP065211.1 Enterococcus lactis
306 9256 9522 + NZ_LS483383.1 Streptococcus cristatus ATCC 51100
307 543844 544083 + NZ_CP022413.2 Blautia hansenii DSM 20583
308 238499 238759 + NC_013216.1 Desulfofarcimen acetoxidans DSM 771
309 4567514 4567774 + NZ_CP009933.1 Clostridium scatologenes
310 1924915 1925154 - NZ_CP035130.1 Gudongella oleilytica
311 608852 609094 + NC_014657.1 Caldicellulosiruptor owensensis OL
312 247540 247779 + NZ_AP023367.1 Anaerocolumna cellulosilytica
313 2733611 2733874 - NZ_HG917868.1 Clostridium bornimense
314 4488203 4488442 - NZ_CP039126.1 Blautia producta
315 262262 262501 + NC_014410.1 Thermoanaerobacterium thermosaccharolyticum DSM 571
316 942917 943198 + NZ_CP014159.1 Aerococcus christensenii
317 130816 131109 + NZ_CP042410.1 Leuconostoc citreum
318 1831253 1831495 - NC_015949.1 Caldicellulosiruptor lactoaceticus 6A
319 659849 660091 + NC_014721.1 Caldicellulosiruptor kristjanssonii I77R1B
320 2497149 2497409 - NZ_LR590481.1 Hathewaya histolytica
321 5356683 5356943 - NZ_CP020953.1 Clostridium drakei
322 1787028 1787294 - NZ_CP032621.1 Streptococcus gwangjuense
323 41003 41275 - NZ_CP029971.1 Lentilactobacillus kefiri
324 152597 152842 + NC_011837.1 Clostridium kluyveri NBRC 12016
325 2109291 2109530 - NZ_CP027002.1 [Ruminococcus] gnavus ATCC 29149
326 2149783 2150055 + NZ_CP032627.1 Lactococcus allomyrinae
327 438679 438963 + NZ_CP065993.1 Leuconostoc pseudomesenteroides
328 294528 294800 - NZ_CP065637.1 Lactococcus garvieae
329 1581838 1582110 - NZ_CP013237.1 Streptococcus mutans
330 1560438 1560710 - NZ_CP014835.1 Streptococcus halotolerans
331 4500012 4500272 - NZ_CP011803.1 Clostridium carboxidivorans P7
332 2450621 2450884 - NC_014334.2 Lacticaseibacillus paracasei
333 263896 264141 + NZ_CP019698.1 Desulfotomaculum ferrireducens
334 8976 9248 + NZ_LS483343.1 Streptococcus ferus
335 3619722 3619961 - NC_011898.1 Ruminiclostridium cellulolyticum H10
336 2052836 2053078 - NC_014652.1 Caldicellulosiruptor hydrothermalis 108
337 1273014 1273265 - NZ_LT632322.1 Murdochiella vaginalis
338 9066 9332 + NZ_CP012805.1 Streptococcus anginosus
339 3358073 3358327 - NC_015687.1 Clostridium acetobutylicum DSM 1731
340 9549 9821 + NZ_AP014612.1 Streptococcus troglodytae
341 2228866 2229111 + NZ_LR130778.1 Petrocella atlantisensis
342 1491922 1492191 - NZ_CP019728.1 Jeotgalibaca dankookensis
343 306793 307062 + NZ_CP044534.1 Limosilactobacillus frumenti
344 291621 291863 - NZ_HF545617.1 Ruminococcus bicirculans
345 4028761 4029000 - NZ_CP011663.1 Clostridium sporogenes
346 3997083 3997340 - NZ_CP013019.1 Clostridium pasteurianum
347 1194627 1194872 - NC_016630.1 Filifactor alocis ATCC 35896
348 1966458 1966733 - NZ_CP039712.1 Vagococcus zengguangii
349 2462975 2463241 - NZ_CP023074.1 Enterococcus thailandicus
350 507796 508071 + NZ_CP049886.1 Vagococcus coleopterorum
351 735355 735597 + NC_012034.1 Caldicellulosiruptor bescii DSM 6725
352 8837 9103 + NZ_LS483436.1 Streptococcus intermedius
353 3747869 3748108 - NZ_CP028842.1 Clostridium botulinum
354 2156349 2156591 - NC_014720.1 Caldicellulosiruptor kronotskyensis 2002
355 282943 283188 + NC_014964.1 Thermoanaerobacter brockii subsp. finnii Ako-1
356 604630 604902 + NZ_CP043405.1 Streptococcus ratti
357 3588229 3588471 + NZ_CP017269.1 Geosporobacter ferrireducens
358 1076388 1076660 - NZ_CP032626.1 Apilactobacillus bombintestini
359 618151 618414 + NZ_CP017713.1 Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001
360 2484467 2484712 - NC_015958.1 Thermoanaerobacter wiegelii Rt8.B1
361 2708789 2709034 - NZ_CP032416.1 Clostridium fermenticellae
362 177952 178191 + NC_010001.1 Lachnoclostridium phytofermentans ISDg
363 506038 506280 + NZ_LR699011.1 Roseburia hominis
364 1646608 1646871 - NZ_CP019573.1 Abyssicoccus albus
365 309894 310160 + NZ_CP045530.1 Limosilactobacillus pontis
366 1278651 1278890 + NC_015275.1 Cellulosilyticum lentocellum DSM 5427
367 9932 10204 + NZ_LR134512.1 Streptococcus agalactiae
368 272231 272500 + NC_016605.1 Pediococcus claussenii ATCC BAA-344
369 1835073 1835315 - NC_014833.1 Ruminococcus albus 7 = DSM 20455
370 147671 147913 + NZ_CP019870.1 Clostridioides difficile
371 368650 368892 + NZ_CP018809.1 Lactobacillus jensenii
372 1937704 1937943 - NC_012778.1 [Eubacterium] eligens ATCC 27750
373 179696 179938 + NZ_CP014150.1 Paeniclostridium sordellii
374 713495 713737 + NC_014392.1 Caldicellulosiruptor obsidiansis OB47
375 285441 285707 + NZ_CP045240.1 Limosilactobacillus vaginalis
376 778838 779101 - NZ_CP034465.1 Jeotgalibaca ciconiae
377 598161 598427 - NZ_CP049740.1 Jeotgalibaca arthritidis
378 77853 78128 + NC_014098.1 Kyrpidia tusciae DSM 2912
379 298766 299029 + NZ_AP022822.1 Enterococcus saigonensis
380 2451842 2452084 - NZ_CP036523.1 Peptacetobacter hiranonis
381 2065764 2066009 - NC_014209.1 Thermoanaerobacter mathranii subsp. mathranii str. A3
382 2176179 2176424 - NC_013921.1 Thermoanaerobacter italicus Ab9
383 672163 672405 + NZ_CP034791.1 Caldicellulosiruptor changbaiensis
384 3004072 3004311 - NZ_CP014223.1 Anaerotignum propionicum DSM 1682
385 3713520 3713762 - NZ_LR027880.1 Roseburia intestinalis L1-82
386 1382099 1382341 + NC_009437.1 Caldicellulosiruptor saccharolyticus DSM 8903
387 253510 253758 - NC_016048.1 Oscillibacter valericigenes Sjm18-20
388 394652 394894 + NC_014614.1 Acetoanaerobium sticklandii
389 2137606 2137854 - NZ_CP012395.1 Clostridium autoethanogenum DSM 10061
390 4504836 4505084 - NC_014328.1 Clostridium ljungdahlii DSM 13528
391 2946075 2946323 - NZ_CP014170.1 Clostridium tyrobutyricum
392 2095834 2096079 - NZ_CP009170.1 Thermoanaerobacter kivui
393 76655 76930 + NZ_CP024955.1 Kyrpidia spormannii
394 355910 356149 + NC_016627.1 Acetivibrio clariflavus DSM 19732
395 364290 364532 + NZ_CP044496.1 Lactobacillus acetotolerans
396 2126251 2126490 - NZ_CP017702.1 Companilactobacillus farciminis KCTC 3681 = DSM 20184
397 610451 610693 + NZ_CP048436.1 Flavonifractor plautii
398 386068 386307 + NZ_CP027228.1 Mogibacterium diversum
399 1037513 1037755 - NZ_CP012034.1 Companilactobacillus ginsenosidimutans
400 368500 368742 + NZ_CP059829.1 Lactobacillus ultunensis
401 77504 77743 + NZ_CP021850.1 Pseudoclostridium thermosuccinogenes
402 108494 108733 + NZ_CP025197.1 Acetivibrio saccincola
403 246158 246400 + NZ_CP031835.1 Lactobacillus amylolyticus
404 266975 267217 + NC_021181.2 Lactobacillus acidophilus La-14
405 2861000 2861242 - NC_009922.1 Alkaliphilus oremlandii OhILAs
406 397971 398237 + NZ_CP045007.1 Latilactobacillus graminis
407 1742433 1742672 - NZ_CP049366.1 Companilactobacillus pabuli
408 423289 423528 + NZ_CP017996.1 Companilactobacillus crustorum
409 2535322 2535624 - NZ_CP011391.1 Faecalibaculum rodentium
410 2051845 2052084 - NZ_CP040736.1 Companilactobacillus futsaii
411 2335137 2335382 - NZ_LT906477.1 Clostridium cochlearium
412 3445237 3445476 - NC_016894.1 Acetobacterium woodii DSM 1030
413 1576637 1576879 - NZ_CP015444.1 Lactobacillus helveticus
414 126412 126675 + NC_021184.1 Desulfoscipio gibsoniae DSM 7213
415 283113 283352 + NC_020134.1 Thermoclostridium stercorarium subsp. stercorarium DSM 8532
416 1517188 1517457 - NC_008525.1 Pediococcus pentosaceus ATCC 25745
417 1054005 1054265 - NZ_CP071376.1 Clostridium gasigenes
418 1179971 1180237 - NZ_CP026116.1 Latilactobacillus curvatus JCM 1096 = DSM 20019
419 176294 176536 - NZ_CP019323.1 Companilactobacillus allii
420 309480 309722 + NZ_CP059276.1 Lactobacillus taiwanensis
421 457345 457611 - NZ_CP046037.1 Latilactobacillus sakei
422 2023622 2023864 - NZ_CP068564.1 Keratinibaculum paraultunense
423 2492552 2492791 - NC_018664.1 Gottschalkia acidurici 9a
424 310236 310478 + NZ_AP018549.1 Lactobacillus paragasseri
425 1409262 1409504 - NZ_CP029544.1 Lactobacillus helsingborgensis
426 2448469 2448735 - NZ_AP024085.1 Faecalibacillus intestinalis
427 1498697 1498939 - NZ_CP029477.1 Lactobacillus kullabergensis
428 1438426 1438668 - NZ_CP029256.1 Christensenella minuta
429 330430 330672 + NZ_CP061341.1 Lactobacillus kefiranofaciens
430 4575231 4575509 - NC_014393.1 Clostridium cellulovorans 743B
431 120935 121183 + NC_014220.1 Syntrophothermus lipocalidus DSM 12680
432 307288 307530 + NC_008530.1 Lactobacillus gasseri ATCC 33323 = JCM 1131
433 572475 572732 + NZ_LT635480.1 Ndongobacter massiliensis
434 94181 94423 + NC_008346.1 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311
435 884473 884712 - NZ_CP032364.1 Lachnoanaerobaculum umeaense
436 1309495 1309737 - NZ_CP029476.1 Lactobacillus apis
437 382549 382794 + NZ_CP025286.1 Ethanoligenens harbinense YUAN-3
438 1113040 1113285 + NZ_CP030777.1 Faecalibacterium prausnitzii
439 848932 849171 + NC_015520.1 Mahella australiensis 50-1 BON
440 2340481 2340726 - NC_003869.1 Caldanaerobacter subterraneus subsp. tengcongensis MB4
441 1303317 1303586 - NZ_AP013035.1 Thermosulfidibacter takaii ABI70S6
442 1373741 1374031 + NZ_CP028105.1 Fusobacterium ulcerans
443 1042524 1042814 + NZ_CP028103.1 Fusobacterium varium ATCC 27725
444 497253 497543 - NZ_CP028102.1 Fusobacterium mortiferum ATCC 9817
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NC_002570.2
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF02559.18 0.64 282 2662 same-strand CarD-like/TRCF domain
2 PF03461.17 0.64 282 2662 same-strand TRCF domain
3 PF17757.3 0.63 281 2659.0 same-strand UvrB interaction domain
4 PF00271.33 0.63 280 2662 same-strand Helicase conserved C-terminal domain
5 PF00270.31 0.64 282 2662 same-strand DEAD/DEAH box helicase
6 PF04851.17 0.64 282 2662 same-strand Type III restriction enzyme, res subunit
7 PF01943.19 0.65 290 1465.5 same-strand Polysaccharide biosynthesis protein
8 PF14667.8 0.67 299 1466 same-strand Polysaccharide biosynthesis C-terminal domain
9 PF03819.19 0.65 286 351 same-strand MazG nucleotide pyrophosphohydrolase domain
10 PF04977.17 0.91 403 801.5 same-strand Septum formation initiator
11 PF00575.25 0.7 308 1230.5 same-strand S1 RNA binding domain
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