Result : Q9HXZ6
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Cell division protein FtsB |
| NCBI Accession ID | AE004091.2 |
| Organism | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) |
| Left | 4068328 |
| Right | 4068612 |
| Strand | - |
| Nucleotide Sequence | TTGAGGTTACGTAGCCCCTACTGGCTGTTCGTGGTGCTGATCCTGGCGCTGGCGGGCCTGCAATATCGCCTGTGGGTCGGCGATGGCAGCCTGGCGCAGGTGCGCGACCTGCAGAAGCAGATCGCCGACCAGCATGGCGAGAACGAGCGCCTGCTGGAGCGCAACCGGATTCTCGAAGCCGAAGTCGCCGAGCTGAAGAAAGGCACCGAGACCGTCGAGGAGCGTGCGCGGCACGAGCTCGGCATGGTCAAGGACGGCGAAACCCTCTACCAGCTCGCCAAGTGA |
| Sequence | MRLRSPYWLFVVLILALAGLQYRLWVGDGSLAQVRDLQKQIADQHGENERLLERNRILEAEVAELKKGTETVEERARHELGMVKDGETLYQLAK |
| Source of smORF | Swiss-Prot |
| Function | Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. {ECO:0000255|HAMAP-Rule:MF_00599}. |
| Pubmed ID | 10984043 |
| Domain | CDD:416267 |
| Functional Category | Others |
| Uniprot ID | Q9HXZ6 |
| ORF Length (Amino Acid) | 94 |
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| Conservation Analysis |
No. of Species: 86
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 4068328 | 4068612 | - | NC_002516.2 | Pseudomonas aeruginosa PAO1 |
| 2 | 1302743 | 1302994 | + | NZ_CP047698.1 | Pseudomonas knackmussii |
| 3 | 5377196 | 5377480 | - | NZ_CP048833.1 | Pseudomonas multiresinivorans |
| 4 | 4706872 | 4707108 | - | NZ_AP022642.1 | Pseudomonas otitidis |
| 5 | 4722905 | 4723165 | - | NZ_CP043311.1 | Pseudomonas lalkuanensis |
| 6 | 1783269 | 1783547 | + | NZ_CP013124.1 | Pseudomonas mendocina S5.2 |
| 7 | 3646014 | 3646292 | - | NZ_CP068551.1 | Pseudomonas khazarica |
| 8 | 2009186 | 2009464 | + | NZ_CP060009.1 | Pseudomonas sediminis |
| 9 | 5252832 | 5253125 | - | NZ_CP014158.1 | Pseudomonas citronellolis |
| 10 | 4952400 | 4952678 | - | NZ_CP056030.1 | Pseudomonas eucalypticola |
| 11 | 3324050 | 3324301 | - | NZ_CP011835.1 | Azotobacter chroococcum |
| 12 | 3376673 | 3376951 | - | NZ_LR215729.2 | Pseudomonas marincola |
| 13 | 4898022 | 4898306 | - | NZ_AP014862.1 | Pseudomonas furukawaii |
| 14 | 1495554 | 1495832 | + | NZ_CP018420.1 | Pseudomonas veronii |
| 15 | 1413089 | 1413367 | + | NZ_CP023272.1 | Pseudomonas lurida |
| 16 | 1402470 | 1402748 | + | NZ_CP029608.1 | Pseudomonas kribbensis |
| 17 | 3558374 | 3558652 | + | NZ_CP014205.2 | Pseudomonas glycinae |
| 18 | 1360678 | 1360956 | + | NZ_CP062253.1 | Pseudomonas gozinkensis |
| 19 | 1327413 | 1327691 | + | NZ_CP062252.1 | Pseudomonas allokribbensis |
| 20 | 1456422 | 1456700 | + | NZ_CP071706.1 | Pseudomonas donghuensis |
| 21 | 4478170 | 4478451 | - | NC_008027.1 | Pseudomonas entomophila L48 |
| 22 | 4428753 | 4429034 | - | NZ_CP024159.1 | Pseudomonas mosselii |
| 23 | 3646433 | 3646714 | - | NZ_CP009365.1 | Pseudomonas soli |
| 24 | 1378957 | 1379235 | + | NZ_LS999205.1 | Pseudomonas protegens CHA0 |
| 25 | 4527029 | 4527307 | - | NZ_CP046621.1 | Pseudomonas alkylphenolica |
| 26 | 1402873 | 1403112 | + | NZ_CP027723.1 | Pseudomonas orientalis |
| 27 | 4792768 | 4793046 | - | NZ_CP070503.1 | Pseudomonas atacamensis |
| 28 | 1343779 | 1344060 | + | NZ_CP022562.1 | Pseudomonas monteilii |
| 29 | 1628308 | 1628586 | + | NZ_CP054205.1 | Pseudomonas rhodesiae |
| 30 | 4051861 | 4052112 | + | NZ_CP045302.1 | Azotobacter salinestris |
| 31 | 1307698 | 1307976 | + | NZ_CP035088.1 | Pseudomonas viciae |
| 32 | 2874377 | 2874655 | - | NZ_CP048810.1 | Pseudomonas bijieensis |
| 33 | 1314686 | 1314964 | + | NZ_CP034725.1 | Pseudomonas brassicacearum |
| 34 | 2550938 | 2551216 | - | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 35 | 1105893 | 1106171 | + | NZ_CP014870.1 | Pseudomonas silesiensis |
| 36 | 111275 | 111553 | + | NZ_CP009533.1 | Pseudomonas rhizosphaerae |
| 37 | 4898190 | 4898468 | + | NZ_CP014262.1 | Pseudomonas corrugata |
| 38 | 1317908 | 1318186 | + | NZ_CP061079.1 | Pseudomonas chlororaphis |
| 39 | 3357370 | 3357648 | - | NZ_CP012676.1 | Pseudomonas versuta |
| 40 | 4718436 | 4718717 | - | NC_021505.1 | Pseudomonas putida NBRC 14164 |
| 41 | 1556970 | 1557209 | + | NZ_CP042804.1 | Pseudomonas amygdali pv. tabaci str. ATCC 11528 |
| 42 | 1618982 | 1619221 | + | NZ_CP027756.1 | Pseudomonas synxantha |
| 43 | 1696885 | 1697124 | + | NZ_CP067022.1 | Pseudomonas cannabina pv. alisalensis |
| 44 | 1407621 | 1407899 | + | NZ_CP010896.1 | Pseudomonas simiae |
| 45 | 4768266 | 4768544 | - | NZ_CP049044.1 | Pseudomonas psychrophila |
| 46 | 1678463 | 1678702 | + | NZ_CP068034.2 | Pseudomonas syringae |
| 47 | 3667475 | 3667753 | - | NZ_CP062158.2 | Pseudomonas lundensis |
| 48 | 1360334 | 1360612 | + | NZ_CP051487.1 | Pseudomonas umsongensis |
| 49 | 490648 | 490926 | - | NZ_CP070505.1 | Pseudomonas toyotomiensis |
| 50 | 4810381 | 4810662 | + | NZ_CP031146.1 | Pseudomonas plecoglossicida |
| 51 | 1420436 | 1420714 | + | NZ_CP007039.1 | Pseudomonas cichorii JBC1 |
| 52 | 1718879 | 1719118 | + | NC_004578.1 | Pseudomonas syringae pv. tomato str. DC3000 |
| 53 | 5183406 | 5183684 | - | NZ_CP012400.2 | Pseudomonas yamanorum |
| 54 | 3921044 | 3921331 | - | NC_012560.1 | Azotobacter vinelandii DJ |
| 55 | 603909 | 604160 | + | NZ_CP043869.1 | Neptunomonas concharum |
| 56 | 2510035 | 2510268 | - | NZ_CP029822.1 | Entomomonas moraniae |
| 57 | 1597705 | 1597947 | + | NC_007912.1 | Saccharophagus degradans 2-40 |
| 58 | 744764 | 745048 | + | NZ_CP012362.1 | Oblitimonas alkaliphila |
| 59 | 799433 | 799717 | + | NZ_CP060084.1 | Teredinibacter haidensis |
| 60 | 2531271 | 2531516 | + | NZ_CP060092.1 | Teredinibacter purpureus |
| 61 | 1634438 | 1634686 | - | NZ_LR134374.1 | Legionella spiritensis |
| 62 | 25137 | 25409 | - | NZ_LR134433.1 | Legionella adelaidensis |
| 63 | 4326414 | 4326695 | + | NC_018012.1 | Thiocystis violascens DSM 198 |
| 64 | 3451860 | 3452120 | - | NZ_CP022358.1 | Shewanella bicestrii |
| 65 | 157376 | 157663 | - | NZ_CP019343.1 | Oceanicoccus sagamiensis |
| 66 | 3807126 | 3807398 | - | NC_016901.1 | Shewanella baltica OS678 |
| 67 | 1228225 | 1228485 | - | NZ_CP036200.1 | Shewanella maritima |
| 68 | 1441441 | 1441677 | + | NC_009901.1 | Shewanella pealeana ATCC 700345 |
| 69 | 1321190 | 1321453 | + | NZ_CP037952.1 | Parashewanella spongiae |
| 70 | 1096230 | 1096493 | - | NC_018868.3 | Simiduia agarivorans SA1 = DSM 21679 |
| 71 | 1378624 | 1378881 | + | NC_011566.1 | Shewanella piezotolerans WP3 |
| 72 | 1905683 | 1905934 | + | NC_007645.1 | Hahella chejuensis KCTC 2396 |
| 73 | 4136551 | 4136805 | - | NZ_CP021425.1 | Oleiphilus messinensis |
| 74 | 1546171 | 1546428 | - | NZ_AP014879.1 | Sulfuricaulis limicola |
| 75 | 455079 | 455360 | + | NC_013851.1 | Allochromatium vinosum DSM 180 |
| 76 | 2672754 | 2673035 | - | NZ_CP039268.1 | Thermochromatium tepidum ATCC 43061 |
| 77 | 1038818 | 1039057 | - | NZ_CP022684.1 | Ketobacter alkanivorans |
| 78 | 1660813 | 1661085 | + | NZ_CP046378.1 | Shewanella algae |
| 79 | 687872 | 688129 | + | NZ_CP015839.1 | Marinobacterium aestuarii |
| 80 | 1552359 | 1552601 | + | NZ_CP013189.1 | Pseudohongiella spirulinae |
| 81 | 1681415 | 1681657 | + | NZ_CP036422.1 | Halioglobus maricola |
| 82 | 2997172 | 2997417 | - | NZ_CP037951.1 | Parashewanella tropica |
| 83 | 1808723 | 1808986 | - | NZ_AP012273.1 | Thiolapillus brandeum |
| 84 | 4664495 | 4664755 | - | NZ_CP014782.1 | Shewanella psychrophila |
| 85 | 1860195 | 1860455 | - | NZ_AP018725.1 | Sulfuriflexus mobilis |
| 86 | 2045577 | 2045858 | - | NC_007947.1 | Methylobacillus flagellatus KT |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP043311.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF08240.14 | 0.62 | 53 | 1802 | same-strand | Alcohol dehydrogenase GroES-like domain |
| 2 | PF00107.28 | 0.62 | 53 | 1802 | same-strand | Zinc-binding dehydrogenase |
| 3 | PF13602.8 | 0.6 | 52 | 1794.0 | same-strand | Zinc-binding dehydrogenase |
| 4 | PF03466.22 | 0.6 | 52 | 810.5 | opposite-strand | LysR substrate binding domain |
| 5 | PF00126.29 | 0.6 | 52 | 810.5 | opposite-strand | Bacterial regulatory helix-turn-helix protein, lysR family |
| 6 | PF01128.21 | 0.92 | 79 | -3 | same-strand | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
| 7 | PF00113.24 | 0.95 | 82 | 172.0 | same-strand | Enolase, C-terminal TIM barrel domain |
| 8 | PF03952.18 | 0.95 | 82 | 172.0 | same-strand | Enolase, N-terminal domain |
| 9 | PF00793.22 | 0.8 | 69 | 1615 | same-strand | DAHP synthetase I family |
| 10 | PF06418.16 | 0.94 | 81 | 2461 | same-strand | CTP synthase N-terminus |
| 11 | PF00117.30 | 0.94 | 81 | 2461 | same-strand | Glutamine amidotransferase class-I |
| 12 | PF01171.22 | 0.71 | 61 | 4362 | same-strand | PP-loop family |
| 13 | PF09179.13 | 0.73 | 63 | 4367 | same-strand | TilS substrate binding domain |
| 14 | PF03255.16 | 0.7 | 60 | 5790.0 | same-strand | Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit |
| 15 | PF02542.18 | 0.74 | 64 | 3799.5 | same-strand | YgbB family |
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