ProsmORF-pred
Result : Q93PP8
Protein Information
Information Type Description
Protein name Rubredoxin-2 (Rd-2)
NCBI Accession ID AF321851.1
Organism Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949 / MB)
Left 832
Right 1020
Strand +
Nucleotide Sequence ATGGCTGAACCGCAAGACATGTGGCGTTGCCAGATGGTAAACTGTGGCTATGTGTATGATCCCGACCGTGGCGACAAGCGCCGCAAGGTTCCTGCGGGAACCAAGTTCGAAGATCTGCCCGAAGACTGGCGTTGTCCGGTCTGTGGCGCGGGTAAAAAAAGTTTTCGCCGCCTGAGCGATGAAGCATAA
Sequence MAEPQDMWRCQMVNCGYVYDPDRGDKRRKVPAGTKFEDLPEDWRCPVCGAGKKSFRRLSDEA
Source of smORF Swiss-Prot
Function Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule.
Pubmed ID 11454214 9662435
Domain CDD:412217
Functional Category Metal-binding
Uniprot ID Q93PP8
ORF Length (Amino Acid) 62
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Conservation Analysis
Conservation Analysis
No. of Species: 168
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 1067397 1067585 + NZ_CP014229.1 Desulfovibrio fairfieldensis
2 2030218 2030376 - NC_016629.1 Desulfocurvibacter africanus subsp. africanus str. Walvis Bay
3 1958633 1958794 - NC_016629.1 Desulfocurvibacter africanus subsp. africanus str. Walvis Bay
4 2218146 2218361 + NC_012796.1 Desulfovibrio magneticus RS-1
5 4060648 4060806 + NC_012796.1 Desulfovibrio magneticus RS-1
6 2087947 2088162 + NZ_CP026538.1 Desulfovibrio carbinolicus
7 916151 916309 - NZ_CP026538.1 Desulfovibrio carbinolicus
8 1180386 1180601 - NZ_CP045504.1 Desulfovibrio sulfodismutans DSM 3696
9 1901521 1901679 + NZ_CP045504.1 Desulfovibrio sulfodismutans DSM 3696
10 1840721 1840924 - NZ_CP014230.1 Desulfomicrobium orale DSM 12838
11 2720478 2720639 + NZ_CP014230.1 Desulfomicrobium orale DSM 12838
12 5346491 5346670 - NZ_AP021875.1 Desulfosarcina widdelii
13 5346226 5346387 - NZ_AP021875.1 Desulfosarcina widdelii
14 876342 876527 + NC_020127.1 Lawsonia intracellularis N343
15 1953896 1954111 + NZ_CP045508.1 Desulfolutivibrio sulfoxidireducens
16 1954255 1954440 + NZ_CP045508.1 Desulfolutivibrio sulfoxidireducens
17 3331253 3331411 - NZ_CP045508.1 Desulfolutivibrio sulfoxidireducens
18 3942234 3942392 - NC_008554.1 Syntrophobacter fumaroxidans MPOB
19 3626074 3626235 - NC_008554.1 Syntrophobacter fumaroxidans MPOB
20 5957006 5957185 - NZ_AP021876.1 Desulfosarcina ovata subsp. sediminis
21 5956686 5956847 - NZ_AP021876.1 Desulfosarcina ovata subsp. sediminis
22 1954754 1954915 - NC_016803.1 Pseudodesulfovibrio mercurii
23 1113921 1114091 - NC_016803.1 Pseudodesulfovibrio mercurii
24 94655 94834 - NC_012881.1 Maridesulfovibrio salexigens DSM 2638
25 3574067 3574246 + NZ_AP021874.1 Desulfosarcina alkanivorans
26 3574412 3574573 + NZ_AP021874.1 Desulfosarcina alkanivorans
27 2305494 2305655 - NZ_CP039543.1 Desulfovibrio marinus
28 748925 749134 - NC_020304.1 Desulfocapsa sulfexigens DSM 10523
29 1688974 1689132 + NC_020304.1 Desulfocapsa sulfexigens DSM 10523
30 2455713 2455871 + NC_020304.1 Desulfocapsa sulfexigens DSM 10523
31 2413203 2413394 + NC_015388.1 Desulfobacca acetoxidans DSM 11109
32 298205 298384 + NC_018645.1 Desulfobacula toluolica Tol2
33 2049342 2049500 - NC_018645.1 Desulfobacula toluolica Tol2
34 3181151 3181309 - NZ_AP017378.1 Desulfovibrio ferrophilus
35 1098548 1098706 + NZ_AP017378.1 Desulfovibrio ferrophilus
36 3903327 3903482 + NZ_LT907975.1 Pseudodesulfovibrio profundus
37 2656403 2656564 + NZ_LT907975.1 Pseudodesulfovibrio profundus
38 3742778 3742933 - NZ_CP046400.1 Pseudodesulfovibrio cashew
39 1696817 1696978 + NZ_CP046400.1 Pseudodesulfovibrio cashew
40 4485730 4485909 - NZ_CP061799.1 Desulfonema limicola
41 2888278 2888439 + NZ_CP061799.1 Desulfonema limicola
42 1605864 1606022 - NZ_CP061799.1 Desulfonema limicola
43 151349 151555 - NZ_AP014945.1 Caldimicrobium thiodismutans
44 1395363 1395524 - NZ_AP014945.1 Caldimicrobium thiodismutans
45 893151 893312 + NC_014844.1 Pseudodesulfovibrio aespoeensis Aspo-2
46 2824946 2825101 + NC_014844.1 Pseudodesulfovibrio aespoeensis Aspo-2
47 3187578 3187757 + NC_009943.1 Desulfococcus oleovorans Hxd3
48 3193884 3194045 + NC_009943.1 Desulfococcus oleovorans Hxd3
49 209756 209932 + NC_016584.1 Desulfosporosinus orientis DSM 765
50 434642 434845 - NZ_CP048877.1 Thermosulfuriphilus ammonigenes
51 4970881 4971057 + NC_018025.1 Desulfomonile tiedjei DSM 6799
52 405079 405231 - NZ_CP022121.1 Dehalobacterium formicoaceticum
53 1252712 1252909 + NZ_CP008796.1 Thermodesulfobacterium commune DSM 2178
54 889775 889939 + NZ_CP008796.1 Thermodesulfobacterium commune DSM 2178
55 1122886 1123047 - NZ_CP008796.1 Thermodesulfobacterium commune DSM 2178
56 211082 211258 + NC_018515.1 Desulfosporosinus meridiei DSM 13257
57 1266834 1267034 + NZ_CP042909.1 Thermosulfurimonas marina
58 1616387 1616551 + NZ_CP042909.1 Thermosulfurimonas marina
59 243985 244161 + NC_018068.1 Desulfosporosinus acidiphilus SJ4
60 428499 428660 + NC_018068.1 Desulfosporosinus acidiphilus SJ4
61 603616 603774 - NC_011832.1 Methanosphaerula palustris E1-9c
62 2252915 2253118 + NC_015681.1 Thermodesulfatator indicus DSM 15286
63 2098952 2099113 - NC_015681.1 Thermodesulfatator indicus DSM 15286
64 1012892 1013053 + NC_015681.1 Thermodesulfatator indicus DSM 15286
65 2870688 2870879 - NC_013216.1 Desulfofarcimen acetoxidans DSM 771
66 2463862 2464017 - NC_013216.1 Desulfofarcimen acetoxidans DSM 771
67 1622025 1622177 - NC_013216.1 Desulfofarcimen acetoxidans DSM 771
68 1825338 1825502 + NC_013216.1 Desulfofarcimen acetoxidans DSM 771
69 570707 570865 + NZ_CP017237.1 Moorella thermoacetica
70 1268338 1268499 - NZ_CP017237.1 Moorella thermoacetica
71 1036968 1037126 + NC_002932.3 Chlorobaculum tepidum TLS
72 1921796 1921957 + NC_002932.3 Chlorobaculum tepidum TLS
73 103547 103708 + NC_000916.1 Methanothermobacter thermautotrophicus str. Delta H
74 103374 103535 + NC_000916.1 Methanothermobacter thermautotrophicus str. Delta H
75 2019493 2019657 - NC_021169.1 Archaeoglobus sulfaticallidus PM70-1
76 1246578 1246736 - NZ_CP017305.1 Chlorobaculum limnaeum
77 2408415 2408576 + NZ_CP017305.1 Chlorobaculum limnaeum
78 122482 122640 + NC_018227.2 Methanoculleus bourgensis MS2
79 414136 414297 + NC_014378.1 Acetohalobium arabaticum DSM 5501
80 180980 181141 - NC_013223.1 Desulfohalobium retbaense DSM 5692
81 439224 439382 - NC_015555.1 Thermoanaerobacterium xylanolyticum LX-11
82 2139745 2139903 + NZ_CP047602.1 Thermoanaerobacterium aotearoense
83 1713068 1713229 + NC_013849.1 Ferroglobus placidus DSM 10642
84 2452320 2452481 - NC_011899.1 Halothermothrix orenii H 168
85 535169 535327 - NC_014410.1 Thermoanaerobacterium thermosaccharolyticum DSM 571
86 548421 548582 + NC_014408.1 Methanothermobacter marburgensis str. Marburg
87 548248 548409 + NC_014408.1 Methanothermobacter marburgensis str. Marburg
88 1683898 1684062 - NC_009828.1 Pseudothermotoga lettingae TMO
89 1718953 1719117 - NC_022792.1 Pseudothermotoga elfii DSM 9442 = NBRC 107921
90 554254 554415 - NZ_CP029462.1 Megasphaera stantonii
91 2325382 2325540 - NC_013173.1 Desulfomicrobium baculatum DSM 4028
92 2878850 2879011 + NC_013173.1 Desulfomicrobium baculatum DSM 4028
93 1910952 1911113 + NZ_CP015520.1 Thermococcus piezophilus
94 700801 700965 + NZ_AP014510.1 Thermotoga profunda AZM34c06
95 872403 872561 - NC_017096.1 Caldisericum exile AZM16c01
96 299991 300152 - NZ_CP015106.1 Thermococcus radiotolerans
97 1257034 1257198 + NZ_CP006577.1 Archaeoglobus fulgidus DSM 8774
98 827911 828072 + NZ_CP006577.1 Archaeoglobus fulgidus DSM 8774
99 1431866 1432024 + NZ_CP009498.1 Endomicrobium proavitum
100 1312497 1312667 + NC_015574.1 Methanobacterium paludis
101 1315322 1315483 - NC_015574.1 Methanobacterium paludis
102 134323 134481 - NC_011661.1 Dictyoglomus turgidum DSM 6724
103 2076820 2076978 + NC_003869.1 Caldanaerobacter subterraneus subsp. tengcongensis MB4
104 1442285 1442446 + NZ_CP011267.1 Geoglobus ahangari
105 860505 860666 + NC_000868.1 Pyrococcus abyssi GE5
106 1825085 1825243 - NC_011297.1 Dictyoglomus thermophilum H-6-12
107 1789039 1789203 - NC_010003.1 Petrotoga mobilis SJ95
108 757509 757667 + NZ_CP014265.1 Methanobrevibacter olleyae
109 622698 622868 - NC_010482.1 Candidatus Korarchaeum cryptofilum OPF8
110 2136469 2136627 - NC_009437.1 Caldicellulosiruptor saccharolyticus DSM 8903
111 1492176 1492337 + NZ_LT900021.1 Thermococcus henrietii
112 3832334 3832489 - NC_014501.1 Gloeothece verrucosa PCC 7822
113 1227527 1227688 - NZ_CP040846.1 Thermococcus indicus
114 44757 44915 - NC_014632.1 Ilyobacter polytropus DSM 2926
115 44559 44717 - NC_014632.1 Ilyobacter polytropus DSM 2926
116 1450324 1450485 + NC_014632.1 Ilyobacter polytropus DSM 2926
117 44941 45099 - NC_014632.1 Ilyobacter polytropus DSM 2926
118 1193902 1194066 - NZ_CP023154.1 Pyrococcus furiosus DSM 3638
119 401340 401501 + NZ_CP006965.1 Thermococcus paralvinellae
120 1199732 1199893 + NZ_LR881183.1 Thermococcus camini
121 1084957 1085115 - NZ_CP040098.1 Desulfoglaeba alkanexedens ALDC
122 3109369 3109527 + NC_011768.1 Desulfatibacillum aliphaticivorans
123 801560 801721 + NC_011529.1 Thermococcus onnurineus NA1
124 1220504 1220662 - NZ_CP028105.1 Fusobacterium ulcerans
125 1228565 1228726 + NZ_LT607756.1 Methanobacterium congolense
126 1103556 1103714 - NC_011027.1 Chlorobaculum parvum NCIB 8327
127 2099488 2099649 + NC_011027.1 Chlorobaculum parvum NCIB 8327
128 4505412 4505570 - NZ_CP061336.1 Ruminiclostridium herbifermentans
129 358128 358286 + NZ_AP019781.1 Methanoculleus chikugoensis
130 2265979 2266176 - NZ_AP019781.1 Methanoculleus chikugoensis
131 1308195 1308353 - NC_014657.1 Caldicellulosiruptor owensensis OL
132 872732 872890 - NC_015949.1 Caldicellulosiruptor lactoaceticus 6A
133 1325343 1325501 + NC_014652.1 Caldicellulosiruptor hydrothermalis 108
134 1482956 1483114 - NC_014721.1 Caldicellulosiruptor kristjanssonii I77R1B
135 1440879 1441037 + NC_014720.1 Caldicellulosiruptor kronotskyensis 2002
136 1527722 1527880 - NC_012034.1 Caldicellulosiruptor bescii DSM 6725
137 564623 564787 + NZ_CP028106.1 Fusobacterium gonidiaformans ATCC 25563
138 1171244 1171402 + NZ_AP022873.1 Dissulfurispira thermophila
139 1279870 1280028 + NZ_CP034791.1 Caldicellulosiruptor changbaiensis
140 2139870 2140028 - NZ_AP019004.1 Phascolarctobacterium faecium
141 3448823 3448981 + NZ_CP010802.1 Desulfuromonas soudanensis
142 2705619 2705783 + NC_013665.1 Methanocella paludicola SANAE
143 2646733 2646891 + NZ_AP018449.1 Methylomusa anaerophila
144 5778182 5778340 - NZ_CP061800.1 Desulfonema magnum
145 1628445 1628606 + NZ_CP008887.1 Thermococcus eurythermalis
146 1478517 1478678 + NC_017527.1 Methanosaeta harundinacea 6Ac
147 1216949 1217107 + NZ_CP007389.1 Thermosipho melanesiensis
148 437768 437926 + NZ_CP007389.1 Thermosipho melanesiensis
149 1501269 1501430 + NZ_CP015102.1 Thermococcus pacificus
150 1701957 1702118 - NZ_CP010835.1 Pyrococcus kukulkanii
151 1714753 1714914 + NZ_CP015103.1 Thermococcus siculi
152 451084 451245 + NC_006624.1 Thermococcus kodakarensis KOD1
153 338972 339133 - NZ_CP014750.1 Thermococcus peptonophilus
154 591560 591721 + NZ_CP007264.1 Thermococcus nautili
155 510221 510382 + NZ_CP014854.1 Thermococcus celer Vu 13 = JCM 8558
156 185165 185323 - NC_009515.1 Methanobrevibacter smithii ATCC 35061
157 2075828 2075992 - NZ_CP025286.1 Ethanoligenens harbinense YUAN-3
158 1078802 1078960 - NC_002967.9 Treponema denticola ATCC 35405
159 1324175 1324339 - NZ_AP014509.1 Thermotoga caldifontis AZM44c09
160 57605 57766 - NZ_AP014509.1 Thermotoga caldifontis AZM44c09
161 646060 646224 + NZ_CP028107.1 Fusobacterium necrophorum subsp. funduliforme
162 541086 541250 - NC_015682.1 Thermodesulfobacterium geofontis OPF15
163 4582273 4582434 + NC_012108.1 Desulfobacterium autotrophicum HRM2
164 76467 76625 + NZ_CP009228.1 Treponema putidum
165 462529 462690 + NC_013642.1 Thermotoga naphthophila RKU-10
166 258852 259013 - NC_009486.1 Thermotoga petrophila RKU-1
167 256259 256420 - NC_023151.1 Thermotoga maritima MSB8
168 299047 299208 + NC_014804.1 Thermococcus barophilus MP
169 3194202 3194360 + NZ_CP009788.1 Geobacter pickeringii
170 1739561 1739728 + NC_013740.1 Acidaminococcus fermentans DSM 20731
171 1530397 1530558 - NZ_AP018712.1 Tepiditoga spiralis
172 70506 70670 - NC_015707.1 Pseudothermotoga thermarum DSM 5069
173 90769 90930 + NZ_AP019779.1 Methanobrevibacter arboriphilus
174 2534992 2535150 - NC_011146.1 Citrifermentans bemidjiense Bem
175 766867 767028 - NZ_CP011803.1 Clostridium carboxidivorans P7
176 1410145 1410321 + NC_008698.1 Thermofilum pendens Hrk 5
177 495988 496149 + NC_017095.1 Fervidobacterium pennivorans DSM 9078
178 681556 681717 + NZ_CP014855.1 Thermococcus gorgonarius
179 1764161 1764319 + NZ_CP035130.1 Gudongella oleilytica
180 1111734 1111895 + NC_022084.1 Thermococcus litoralis DSM 5473
181 2268660 2268821 - NC_012785.1 Kosmotoga olearia TBF 19.5.1
182 3569267 3569425 + NC_007517.1 Geobacter metallireducens GS-15
183 3217787 3217948 - NZ_CP019791.1 Anaerohalosphaera lusitana
184 126621 126782 - NZ_LR134524.1 Peptoniphilus harei
185 1131879 1132043 + NC_017455.1 Halanaerobium praevalens DSM 2228
186 1903856 1904017 + NZ_CP017269.1 Geosporobacter ferrireducens
187 1134126 1134284 - NC_017934.1 Mesotoga prima MesG1.Ag.4.2
188 2342052 2342210 - NZ_AP023213.1 Citrifermentans bremense
189 2790245 2790403 - NC_020134.1 Thermoclostridium stercorarium subsp. stercorarium DSM 8532
190 489009 489167 - NC_008609.1 Pelobacter propionicus DSM 2379
191 105800 105958 + NC_008609.1 Pelobacter propionicus DSM 2379
192 859983 860144 - NC_015680.1 Pyrococcus yayanosii CH1
193 2516661 2516819 - NC_015520.1 Mahella australiensis 50-1 BON
194 1002515 1002679 + NZ_CP021255.1 Desulfobulbus oralis
195 234372 234530 + NC_009051.1 Methanoculleus marisnigri JR1
196 3472668 3472826 - NZ_CP036259.1 Sporomusa termitida
197 959646 959801 - NC_013385.1 Ammonifex degensii KC4
198 13230 13391 + NC_014634.1 Ilyobacter polytropus DSM 2926
199 522287 522445 - NZ_AP023049.1 Alistipes indistinctus
200 215027 215185 - NC_014377.1 Thermosediminibacter oceani DSM 16646
201 388148 388306 - NC_015519.1 Tepidanaerobacter acetatoxydans Re1
202 2788490 2788654 - NZ_CP046996.1 Dehalobacter restrictus
203 5768566 5768775 + NZ_CP053564.1 Pseudonocardia broussonetiae
204 3015117 3015275 + NC_014365.1 Desulfarculus baarsii DSM 2075
205 2275429 2275590 - NC_014365.1 Desulfarculus baarsii DSM 2075
206 2460548 2460709 - NZ_CP045875.1 Heliorestis convoluta
207 10818152 10818325 - NZ_CP012159.1 Chondromyces crocatus
208 1417129 1417293 - NC_014654.1 Halanaerobium hydrogeniformans
209 1854211 1854372 + NZ_CP068564.1 Keratinibaculum paraultunense
210 161240 161395 - NC_008942.1 Methanocorpusculum labreanum Z
211 9875807 9875971 - NZ_CP022163.1 Melittangium boletus DSM 14713
212 1113414 1113572 - NC_011979.1 Geobacter daltonii FRC-32
213 3185760 3185915 - NC_009253.1 Desulfotomaculum reducens MI-1
214 533109 533270 + NC_013741.1 Archaeoglobus profundus DSM 5631
215 1859512 1859676 - NZ_CP030944.1 Arcobacter aquimarinus
216 1616602 1616763 + NZ_LN999010.1 Thermococcus chitonophagus
217 1825581 1825742 - NC_015437.1 Selenomonas sputigena ATCC 35185
218 581279 581437 + NZ_CP018258.1 Dehalogenimonas formicexedens
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