Result : Q92P51
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Acyl carrier protein AcpXL |
| NCBI Accession ID | AL591688.1 |
| Organism | Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) |
| Left | 2101762 |
| Right | 2102049 |
| Strand | - |
| Nucleotide Sequence | ATGCGCGTGACAGCTACATTCGACAAGGTTGCCGATATTATCGCGGAAACGAGCGAGATCGATCGCGAGACGATCAAGCCGGAAAGCCACACGATCGATGATCTCGGCATCGACAGCCTCGACTTTCTCGACATCGTTTTTGCGATCGACAAGGAATTCGGCATCAAGATTCCGCTGGAGCAGTGGACTCAGGAAGTCAACGAAGGCAAGGTCTCGACCGAGGAGTACTTCGTGCTGAAGAACCTTTGTGCCAAGATCGACGAGCTGCGGGCCGCAAAAGCGGGTTGA |
| Sequence | MRVTATFDKVADIIAETSEIDRETIKPESHTIDDLGIDSLDFLDIVFAIDKEFGIKIPLEQWTQEVNEGKVSTEEYFVLKNLCAKIDELRAAKAG |
| Source of smORF | Swiss-Prot |
| Function | Carrier of the growing fatty acid chain in fatty acid biosynthesis. Is involved in the transfer of long hydroxylated fatty acids to lipid A (By similarity). {ECO:0000250}. |
| Pubmed ID | 11481430 11474104 |
| Domain | CDD:415812 |
| Functional Category | Others |
| Uniprot ID | Q92P51 |
| ORF Length (Amino Acid) | 95 |
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| Conservation Analysis |
No. of Species: 116
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 2101422 | 2101709 | - | NC_020528.1 | Sinorhizobium meliloti 2011 |
| 2 | 2340533 | 2340820 | - | NZ_CP041238.1 | Ensifer mexicanus |
| 3 | 1874733 | 1875017 | - | NZ_CP023067.1 | Ensifer sojae CCBAU 05684 |
| 4 | 1851025 | 1851309 | - | NZ_CP034909.1 | Ensifer alkalisoli |
| 5 | 2175560 | 2175838 | - | NZ_CP013107.1 | Sinorhizobium americanum |
| 6 | 2061778 | 2062056 | - | NZ_CP029451.1 | Sinorhizobium fredii CCBAU 25509 |
| 7 | 1823733 | 1824017 | - | NZ_CP015880.1 | Ensifer adhaerens |
| 8 | 2235332 | 2235610 | - | NZ_CP006877.1 | Rhizobium gallicum bv. gallicum R602sp |
| 9 | 4497541 | 4497819 | - | NZ_CP071454.1 | Rhizobium lentis |
| 10 | 2342625 | 2342909 | + | NZ_CP049250.1 | Rhizobium rhizoryzae |
| 11 | 1184118 | 1184402 | - | NZ_CP053856.1 | Rhizobium pusense |
| 12 | 1200369 | 1200653 | - | NZ_CP061003.1 | Agrobacterium tumefaciens |
| 13 | 541697 | 541981 | + | NZ_CP048632.1 | Rhizobium oryzihabitans |
| 14 | 2445702 | 2445986 | - | NZ_CP032694.1 | Rhizobium jaguaris |
| 15 | 2637844 | 2638122 | + | NZ_CP049241.1 | Rhizobium pseudoryzae |
| 16 | 2542896 | 2543174 | - | NZ_CP071612.1 | Rhizobium bangladeshense |
| 17 | 1974727 | 1975011 | - | NZ_HG938353.1 | Neorhizobium galegae bv. orientalis str. HAMBI 540 |
| 18 | 2589221 | 2589499 | - | NZ_CP013500.1 | Rhizobium esperanzae |
| 19 | 2049666 | 2049944 | - | NZ_LR723670.1 | Pseudorhizobium flavum |
| 20 | 1924808 | 1925086 | - | NZ_FO082820.1 | Pseudorhizobium banfieldiae |
| 21 | 2604906 | 2605184 | - | NZ_CP013532.1 | Rhizobium phaseoli |
| 22 | 1864847 | 1865125 | + | NZ_CP054027.1 | Rhizobium hidalgonense |
| 23 | 2180041 | 2180319 | - | NZ_CP034998.1 | Rhizobium acidisoli |
| 24 | 2495846 | 2496124 | - | NZ_CP020906.1 | Rhizobium etli |
| 25 | 2634384 | 2634662 | - | NZ_CP071604.1 | Rhizobium binae |
| 26 | 1429521 | 1429799 | + | NZ_CP059896.1 | Ciceribacter thiooxidans |
| 27 | 2133908 | 2134186 | - | NC_020059.1 | Rhizobium tropici CIAT 899 |
| 28 | 1972625 | 1972909 | - | NZ_CP032509.1 | Georhizobium profundi |
| 29 | 4921017 | 4921295 | + | NZ_CP054021.1 | Rhizobium indicum |
| 30 | 2901303 | 2901581 | - | NZ_CP071678.1 | Rhizobium ruizarguesonis |
| 31 | 827885 | 828166 | - | NC_010103.1 | Brucella canis ATCC 23365 |
| 32 | 829521 | 829802 | - | NC_004310.3 | Brucella suis 1330 |
| 33 | 854720 | 855001 | - | NC_009505.1 | Brucella ovis ATCC 25840 |
| 34 | 833683 | 833964 | - | NC_013119.1 | Brucella microti CCM 4915 |
| 35 | 1155837 | 1156118 | + | NC_003317.1 | Brucella melitensis bv. 1 str. 16M |
| 36 | 1156968 | 1157249 | + | NC_022905.1 | Brucella ceti TE10759-12 |
| 37 | 847500 | 847781 | - | NC_007618.1 | Brucella abortus 2308 |
| 38 | 1880235 | 1880516 | + | NZ_LT605585.1 | Brucella inopinata |
| 39 | 1011631 | 1011912 | - | NZ_CP064063.1 | Brucella anthropi |
| 40 | 3550394 | 3550675 | + | NZ_CP018171.1 | Mesorhizobium oceanicum |
| 41 | 3739125 | 3739412 | - | NZ_CP010803.1 | Martelella endophytica |
| 42 | 557751 | 558032 | - | NZ_CP054836.1 | Oricola thermophila |
| 43 | 3430661 | 3430945 | + | NZ_CP072611.1 | Aureimonas populi |
| 44 | 878132 | 878413 | - | NZ_CP022604.1 | [Ochrobactrum] quorumnocens |
| 45 | 3010109 | 3010390 | + | NZ_CP020330.1 | Martelella mediterranea DSM 17316 |
| 46 | 1190729 | 1191010 | - | NZ_CP017940.1 | Phyllobacterium zundukense |
| 47 | 2525009 | 2525290 | + | NZ_CP036532.1 | Roseitalea porphyridii |
| 48 | 1166228 | 1166512 | + | NZ_LR134529.1 | Bartonella vinsonii |
| 49 | 1135572 | 1135856 | + | NZ_CP010401.1 | Bartonella ancashensis |
| 50 | 1414059 | 1414343 | + | NC_010161.1 | Bartonella tribocorum CIP 105476 |
| 51 | 1306317 | 1306601 | + | NC_012846.1 | Bartonella grahamii as4aup |
| 52 | 1625293 | 1625577 | + | NZ_CP031843.2 | Bartonella kosoyi |
| 53 | 752973 | 753257 | - | NZ_LR134527.1 | Bartonella elizabethae |
| 54 | 1134099 | 1134383 | + | NZ_CP031844.2 | Bartonella krasnovii |
| 55 | 931020 | 931304 | + | NC_014932.1 | Bartonella clarridgeiae 73 |
| 56 | 2039203 | 2039478 | + | NZ_CP019044.1 | Salaquimonas pukyongi |
| 57 | 847813 | 848097 | - | NZ_HG965802.1 | Bartonella henselae |
| 58 | 4566303 | 4566584 | + | NZ_CP015318.1 | Mesorhizobium amorphae CCNWGS0123 |
| 59 | 1644378 | 1644662 | - | NZ_CP058235.1 | Bartonella alsatica |
| 60 | 3754847 | 3755128 | - | NC_019973.1 | Mesorhizobium australicum WSM2073 |
| 61 | 3497868 | 3498149 | + | NZ_CP015064.1 | Mesorhizobium ciceri biovar biserrulae |
| 62 | 3567984 | 3568277 | - | NZ_CP033361.1 | Mesorhizobium erdmanii |
| 63 | 7050359 | 7050652 | + | NZ_CP050296.1 | Mesorhizobium huakuii |
| 64 | 4067366 | 4067647 | - | NZ_CP033507.1 | Mesorhizobium jarvisii |
| 65 | 987369 | 987650 | + | NC_002678.2 | Mesorhizobium japonicum MAFF 303099 |
| 66 | 4005048 | 4005329 | - | NC_015675.1 | Mesorhizobium opportunistum WSM2075 |
| 67 | 898193 | 898477 | + | NZ_AP019773.1 | Bartonella quintana |
| 68 | 2730798 | 2731079 | + | NC_009937.1 | Azorhizobium caulinodans ORS 571 |
| 69 | 2190684 | 2190944 | - | NZ_CP058907.1 | Rhodopseudomonas palustris |
| 70 | 636143 | 636427 | - | NC_008783.1 | Bartonella bacilliformis KC583 |
| 71 | 3570711 | 3571004 | - | NZ_CP042968.1 | Bradyrhizobium paxllaeri |
| 72 | 5919810 | 5920097 | + | NZ_CP022221.1 | Bradyrhizobium zhanjiangense |
| 73 | 824539 | 824820 | + | NZ_CP048630.1 | Ancylobacter pratisalsi |
| 74 | 978520 | 978801 | - | NC_014217.1 | Starkeya novella DSM 506 |
| 75 | 725211 | 725495 | - | NC_020300.1 | Bartonella australis Aust/NH1 |
| 76 | 3962989 | 3963276 | - | NZ_CP058354.1 | Bradyrhizobium japonicum |
| 77 | 4340568 | 4340855 | - | NZ_CP030050.1 | Bradyrhizobium arachidis |
| 78 | 792707 | 792973 | - | NZ_CP043538.1 | Methylobacterium mesophilicum SR1.6/6 |
| 79 | 5025221 | 5025508 | + | NZ_CP030051.1 | Bradyrhizobium guangdongense |
| 80 | 4160403 | 4160690 | - | NZ_CP032617.1 | Bradyrhizobium diazoefficiens |
| 81 | 4429274 | 4429561 | + | NZ_CP030053.1 | Bradyrhizobium guangzhouense |
| 82 | 3406524 | 3406805 | - | NC_020453.1 | Bradyrhizobium oligotrophicum S58 |
| 83 | 2599503 | 2599790 | - | NZ_CP029426.1 | Bradyrhizobium amphicarpaeae |
| 84 | 2409274 | 2409561 | - | NZ_CP022219.1 | Bradyrhizobium guangxiense |
| 85 | 608053 | 608340 | + | NZ_CP044543.1 | Bradyrhizobium betae |
| 86 | 4529789 | 4530076 | + | NC_017082.1 | Bradyrhizobium cosmicum |
| 87 | 7218438 | 7218725 | + | NZ_CP029425.1 | Bradyrhizobium ottawaense |
| 88 | 4827064 | 4827351 | + | NZ_LS398110.1 | Bradyrhizobium vignae |
| 89 | 1710379 | 1710660 | - | NC_007964.1 | Nitrobacter hamburgensis X14 |
| 90 | 6545026 | 6545337 | - | NZ_CP029550.1 | Methylobacterium durans |
| 91 | 4166130 | 4166414 | - | NZ_CP021112.1 | Pseudorhodoplanes sinuspersici |
| 92 | 5337119 | 5337385 | + | NC_010505.1 | Methylobacterium radiotolerans JCM 2831 |
| 93 | 1970417 | 1970704 | - | NC_011894.1 | Methylobacterium nodulans ORS 2060 |
| 94 | 1158329 | 1158610 | - | NZ_CP012946.1 | Blastochloris viridis |
| 95 | 4766991 | 4767257 | + | NZ_CP015367.1 | Methylobacterium phyllosphaerae |
| 96 | 5724245 | 5724511 | + | NZ_CP003811.1 | Methylobacterium oryzae CBMB20 |
| 97 | 1370921 | 1371202 | - | NC_007406.1 | Nitrobacter winogradskyi Nb-255 |
| 98 | 1686666 | 1686947 | - | NC_015684.1 | Afipia carboxidovorans OM5 |
| 99 | 3222303 | 3222596 | - | NZ_CP016428.1 | Bradyrhizobium icense |
| 100 | 2707685 | 2707972 | + | NZ_CP029553.1 | Methylobacterium terrae |
| 101 | 6584932 | 6585219 | + | NZ_CP050066.1 | Bradyrhizobium symbiodeficiens |
| 102 | 5007067 | 5007363 | - | NZ_CP039546.1 | Methylorubrum populi |
| 103 | 2131676 | 2131957 | + | NZ_AP018907.1 | Blastochloris tepida |
| 104 | 3721731 | 3721991 | + | NZ_AP014946.1 | Variibacter gotjawalensis |
| 105 | 1429512 | 1429793 | + | NZ_CP042582.1 | Hypericibacter adhaerens |
| 106 | 1366870 | 1367151 | + | NZ_CP042906.1 | Hypericibacter terrae |
| 107 | 1109710 | 1110000 | - | NZ_CP010522.1 | Liberibacter crescens |
| 108 | 940892 | 941173 | - | NZ_CP044117.1 | Roseomonas mucosa |
| 109 | 526965 | 527246 | - | NZ_CP039690.1 | Phreatobacter stygius |
| 110 | 2836288 | 2836569 | + | NZ_CP016616.1 | Microvirga ossetica |
| 111 | 912064 | 912345 | + | NZ_CP017147.1 | Bosea vaviloviae |
| 112 | 396910 | 397194 | + | NZ_CP045423.1 | Microvirga thermotolerans |
| 113 | 2251513 | 2251794 | - | NZ_CP027668.1 | Phreatobacter cathodiphilus |
| 114 | 577635 | 577919 | + | NZ_AP019700.1 | Stella humosa |
| 115 | 1539908 | 1540189 | - | NC_022997.1 | Hyphomicrobium nitrativorans NL23 |
| 116 | 592921 | 593202 | - | NC_014313.1 | Hyphomicrobium denitrificans ATCC 51888 |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_020528.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF03279.15 | 0.83 | 96 | 3732.0 | same-strand | Bacterial lipid A biosynthesis acyltransferase |
| 2 | PF00107.28 | 0.75 | 87 | 3083 | same-strand | Zinc-binding dehydrogenase |
| 3 | PF08240.14 | 0.75 | 87 | 3083 | same-strand | Alcohol dehydrogenase GroES-like domain |
| 4 | PF13602.8 | 0.75 | 87 | 3083 | same-strand | Zinc-binding dehydrogenase |
| 5 | PF00109.28 | 0.99 | 115 | 777 | same-strand | Beta-ketoacyl synthase, N-terminal domain |
| 6 | PF02801.24 | 0.97 | 112 | 1733.0 | same-strand | Beta-ketoacyl synthase, C-terminal domain |
| 7 | PF07977.15 | 0.69 | 80 | 39.5 | same-strand | FabA-like domain |
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