Result : Q92JL5
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Uncharacterized protein RC0052 |
| NCBI Accession ID | AE006914.1 |
| Organism | Rickettsia conorii (strain ATCC VR-613 / Malish 7) |
| Left | 46518 |
| Right | 46715 |
| Strand | - |
| Nucleotide Sequence | ATGTTATCGAGAGATAGTAGTCAATTAACTTCGTTTAATAATAAAGATTCGCATGATATAATAGAAGTGAGTCAAACATTAAATGCATTAATAAGCATAATAGCTAAACATGACCACGATATAGCTCGACATGCGCAAGCAATTGCAGACATAAAAAAATGTTACAATCTGCAAATGTTGGGTATACTGCAGATATAA |
| Sequence | MLSRDSSQLTSFNNKDSHDIIEVSQTLNALISIIAKHDHDIARHAQAIADIKKCYNLQMLGILQI |
| Source of smORF | Swiss-Prot |
| Function | |
| Pubmed ID | 11557893 |
| Domain | |
| Functional Category | Others |
| Uniprot ID | Q92JL5 |
| ORF Length (Amino Acid) | 65 |
++ More..
| Conservation Analysis |
No. of Species: 3
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 46518 | 46715 | - | NC_003103.1 | Rickettsia conorii str. Malish 7 |
| 2 | 49184 | 49381 | - | NC_010263.3 | Rickettsia rickettsii str. Iowa |
| 3 | 49655 | 49834 | - | NC_016639.1 | Rickettsia slovaca 13-B |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_003103.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF10871.10 | 1.0 | 3 | 1319 | same-strand | Protein of unknown function (DUF2748) |
++ More..