* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_003103.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF03797.21
|
1.0
|
2
|
4661.5
|
opposite-strand
|
Autotransporter beta-domain
|
2
|
PF01406.21
|
1.0
|
2
|
3048.5
|
same-strand
|
tRNA synthetases class I (C) catalytic domain
|
3
|
PF09190.13
|
1.0
|
2
|
3048.5
|
same-strand
|
DALR domain
|
4
|
PF00318.22
|
1.0
|
2
|
1914.5
|
same-strand
|
Ribosomal protein S2
|
5
|
PF00889.21
|
1.0
|
2
|
790.0
|
same-strand
|
Elongation factor TS
|
6
|
PF04413.18
|
1.0
|
2
|
542.5
|
opposite-strand
|
3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
|
7
|
PF04028.15
|
1.0
|
2
|
1933.5
|
opposite-strand
|
Domain of unknown function (DUF374)
|
8
|
PF00155.23
|
1.0
|
2
|
2740.5
|
opposite-strand
|
Aminotransferase class I and II
|
++ More..