* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_003103.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF01168.22
|
1.0
|
2
|
2162.5
|
opposite-strand
|
Alanine racemase, N-terminal domain
|
2
|
PF00842.23
|
1.0
|
2
|
2162.5
|
opposite-strand
|
Alanine racemase, C-terminal domain
|
3
|
PF02405.18
|
1.0
|
2
|
1226.5
|
opposite-strand
|
Permease MlaE
|
4
|
PF00005.29
|
1.0
|
2
|
318.5
|
opposite-strand
|
ABC transporter
|
5
|
PF17629.4
|
1.0
|
2
|
68.5
|
opposite-strand
|
Family of unknown function (DUF5510)
|
++ More..