Result : Q92IB8
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Putative ankyrin repeat protein RC0502 |
| NCBI Accession ID | AE006914.1 |
| Organism | Rickettsia conorii (strain ATCC VR-613 / Malish 7) |
| Left | 495771 |
| Right | 495983 |
| Strand | - |
| Nucleotide Sequence | TTGGATGTTAATACTAAAGATGGAAAGGGACGTATACCTATACATTATGCAACTTATTCTAAACAGCACGAAATAACTCAAATTTTAATTTTATTACAACCCGGCAGTGAAATTGATACAGTAGACAATTATGGCGGCACACCTTTTTTCTATTTGCTACTAAAGCATGAATCAGGTCAAAATAAAACGTTACTGGACTTCTTTTTACGTTAA |
| Sequence | MDVNTKDGKGRIPIHYATYSKQHEITQILILLQPGSEIDTVDNYGGTPFFYLLLKHESGQNKTLLDFFLR |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of pfam13857. Profile Description: Ankyrin repeats (many copies). |
| Pubmed ID | 11557893 |
| Domain | CDD:404699 |
| Functional Category | Others |
| Uniprot ID | Q92IB8 |
| ORF Length (Amino Acid) | 70 |
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| Conservation Analysis |
No. of Species: 3
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 495771 | 495983 | - | NC_003103.1 | Rickettsia conorii str. Malish 7 |
| 2 | 501348 | 501554 | - | NC_016639.1 | Rickettsia slovaca 13-B |
| 3 | 685492 | 685731 | + | NZ_AP019563.1 | Rickettsia asiatica |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_003103.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF04392.14 | 0.67 | 2 | 2291.0 | opposite-strand | ABC transporter substrate binding protein |
| 2 | PF02653.18 | 0.67 | 2 | 1447.0 | opposite-strand | Branched-chain amino acid transport system / permease component |
| 3 | PF00005.29 | 0.67 | 2 | 728.0 | opposite-strand | ABC transporter |
| 4 | PF02600.18 | 1.0 | 3 | 876 | same-strand | Disulfide bond formation protein DsbB |
| 5 | PF01921.20 | 1.0 | 3 | 1574 | opposite-strand | tRNA synthetases class I (K) |
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