Result : Q92HE5

Protein Information

• Protein name: UPF0416 protein RC0826
• NCBI Accession ID: AE006914.1
• Organism: Rickettsia conorii (strain ATCC VR-613 / Malish 7)
• Left: 779765
• Right: 780058
• Strand: +
• Nucleotide Sequence: ATGCGAATATTTGTAAAAGCAGCAATATCAACGGCTGCATGGAGATTTTATGCTCATCCTACAGTTGCTATGGGGATTTGTGTTGGAACAGCTCTTGCATATTCGCCGGAGAACACATTTGAGTTATTAAAAAATACGACTTATACAGGAATAGAAGCAGCAAAATTTGCTTATGAAAATACAGCAGGAATAGTAAACGGAATAGCCGGCTTAGCTCATCTTGTGTATGATAACTTACCAAGCTACAGCGAAACTCCTCAAGTGGATCTAGTCGGTAGCATAGAAATTTCATGA
• Sequence: MRIFVKAAISTAAWRFYAHPTVAMGICVGTALAYSPENTFELLKNTTYTGIEAAKFAYENTAGIVNGIAGLAHLVYDNLPSYSETPQVDLVGSIEIS
• Source of smORF: Swiss-Prot
• Pubmed ID: 11557893
• Functional Category: Others
• Uniprot ID: Q92HE5
• ORF Length (Amino Acid): 97

Conservation Analysis

No. of Species: 5

Sr.No.	Left Position	Right Position	Strand	NCBI Accession id	Species Name
1	779765	780058	+	NC_003103.1	Rickettsia conorii str. Malish 7
2	787332	787643	+	NC_016639.1	Rickettsia slovaca 13-B
3	782445	782756	+	NZ_AP019864.1	Rickettsia heilongjiangensis
4	786730	786987	+	NC_010263.3	Rickettsia rickettsii str. Iowa
5	1001904	1002188	-	NC_007940.1	Rickettsia bellii RML369-C

Neighborhood Conservation Analysis

^* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
^* 'Small ORF' represents the entry/query analyzed.
^* Image generated using 'gggenes'(R-Package).

Neighborhood Representative Chosen(Species): NC_003103.1

Sr.No.	Domain	Co-occurrence Frequency	No. of species in which domain occurs with smORF	Median distance b/w smORF and domain bearing ORFs	Orientation relative to smORF	PFAM Information
1	PF02082.22	0.8	4	2751.0	same-strand	Iron-dependent Transcriptional regulator
2	PF01728.21	0.8	4	2001.0	opposite-strand	FtsJ-like methyltransferase
3	PF00579.27	1.0	5	611	opposite-strand	tRNA synthetases class I (W and Y)