Result : Q8Z6K1
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Major outer membrane lipoprotein Lpp 2 (Braun lipoprotein 2) (BLP 2) (Murein lipoprotein 2) |
| NCBI Accession ID | AL513382.1 |
| Organism | Salmonella typhi |
| Left | 1667153 |
| Right | 1667392 |
| Strand | + |
| Nucleotide Sequence | ATGAACCGCACTAACAAACTGATCTTAGGTGCAGTAGTTCTGGGTTCCACGTTACTGGCAGGTTGTTCCAGCAACGCTAAAATCGATCAGTTGTCTTCCGATGTACAGACGCTGAGCGCTAAAGTTGATCAACTGAGTAATGACGTAAATGCAATGCGTTCCGACGTTCAGGCTGCTAAAGACGACGCAGCTCGCGCTAACCAACGTCTGGACAACAAAGTATTCCGCATCTGTAAATGA |
| Sequence | MNRTNKLILGAVVLGSTLLAGCSSNAKIDQLSSDVQTLSAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNKVFRICK |
| Source of smORF | Swiss-Prot |
| Function | A highly abundant outer membrane lipoprotein that controls the distance between the inner and outer membranes. The only protein known to be covalently linked to the peptidoglycan network (PGN). Also non-covalently binds the PGN. The link between the cell outer membrane and PGN contributes to maintenance of the structural and functional integrity of the cell envelope, and maintains the correct distance between the PGN and the outer membrane. {ECO:0000255|HAMAP-Rule:MF_00843}. |
| Pubmed ID | 11677608 12644504 |
| Domain | CDD:420014 |
| Functional Category | Others |
| Uniprot ID | Q8Z6K1 |
| ORF Length (Amino Acid) | 79 |
++ More..
| Conservation Analysis |
No. of Species: 148
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1459048 | 1459287 | - | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 2 | 1459370 | 1459606 | - | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 3 | 3682694 | 3682930 | - | NZ_CP042941.1 | Atlantibacter hermannii |
| 4 | 3857106 | 3857342 | - | NZ_CP053416.1 | Salmonella bongori |
| 5 | 1957812 | 1958048 | - | NZ_AP022508.1 | Enterobacter bugandensis |
| 6 | 1984762 | 1984998 | - | NZ_CP027986.1 | Enterobacter sichuanensis |
| 7 | 1635445 | 1635681 | + | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 8 | 1904363 | 1904599 | - | NZ_CP017184.1 | Enterobacter roggenkampii |
| 9 | 2756976 | 2757212 | + | NZ_CP013990.1 | Leclercia adecarboxylata |
| 10 | 1930533 | 1930769 | - | NC_015968.1 | Enterobacter soli |
| 11 | 566813 | 567049 | + | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 12 | 1978390 | 1978626 | - | NZ_CP009756.1 | Enterobacter cloacae |
| 13 | 1188353 | 1188589 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 14 | 1485188 | 1485424 | + | NZ_CP045769.1 | Enterobacter cancerogenus |
| 15 | 3616109 | 3616345 | - | NZ_LT556085.1 | Citrobacter amalonaticus |
| 16 | 2194228 | 2194464 | - | NZ_CP043318.1 | Enterobacter chengduensis |
| 17 | 2220483 | 2220719 | - | NZ_CP041247.1 | Raoultella electrica |
| 18 | 1474167 | 1474403 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 19 | 3382065 | 3382301 | + | NZ_CP045205.1 | Citrobacter telavivensis |
| 20 | 4964631 | 4964867 | + | NZ_CP026047.1 | Raoultella planticola |
| 21 | 2304933 | 2305169 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 22 | 2315021 | 2315257 | - | NZ_CP050508.1 | Raoultella terrigena |
| 23 | 3824179 | 3824415 | + | NZ_CP019706.1 | Pantoea alhagi |
| 24 | 2048657 | 2048893 | - | NZ_CP061511.1 | Mixta calida |
| 25 | 2099708 | 2099944 | - | NZ_CP026377.1 | Mixta gaviniae |
| 26 | 1240712 | 1240948 | - | NZ_CP028271.1 | Mixta intestinalis |
| 27 | 2506473 | 2506709 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 28 | 3525804 | 3526040 | - | NZ_CP040428.1 | Jejubacter calystegiae |
| 29 | 3014524 | 3014760 | + | NZ_LR134475.1 | Klebsiella aerogenes |
| 30 | 2125735 | 2125971 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 31 | 3108660 | 3108896 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 32 | 3877894 | 3878130 | + | NZ_CP020388.1 | Pluralibacter gergoviae |
| 33 | 2781895 | 2782131 | + | NZ_CP071320.1 | Serratia ureilytica |
| 34 | 1628578 | 1628814 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 35 | 2326076 | 2326312 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 36 | 1588556 | 1588792 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 37 | 2793209 | 2793445 | + | NZ_CP038498.1 | Pectobacterium punjabense |
| 38 | 4412213 | 4412449 | + | NZ_CP047495.1 | Pectobacterium brasiliense |
| 39 | 1871438 | 1871674 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 40 | 1966826 | 1967062 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 41 | 2989286 | 2989522 | + | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 42 | 2921633 | 2921869 | + | NZ_CP065044.1 | Pectobacterium aroidearum |
| 43 | 2091480 | 2091716 | - | NZ_CP034938.1 | Pectobacterium odoriferum |
| 44 | 1745084 | 1745320 | + | NZ_CP017482.1 | Pectobacterium polaris |
| 45 | 1107226 | 1107462 | - | NZ_CP015749.1 | Pectobacterium parmentieri |
| 46 | 4728484 | 4728720 | + | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 47 | 1286697 | 1286933 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 48 | 720285 | 720521 | - | NZ_CP038469.1 | Citrobacter tructae |
| 49 | 197328 | 197564 | + | NZ_CP044098.1 | Citrobacter portucalensis |
| 50 | 4867455 | 4867691 | - | NZ_CP033744.1 | Citrobacter freundii |
| 51 | 2474772 | 2475008 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 52 | 2524087 | 2524323 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 53 | 1751622 | 1751858 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 54 | 1509026 | 1509262 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 55 | 2293687 | 2293923 | + | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 56 | 1874973 | 1875209 | - | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 57 | 1875882 | 1876118 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 58 | 2135098 | 2135334 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 59 | 1900364 | 1900600 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 60 | 4439400 | 4439636 | - | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 61 | 2160126 | 2160362 | - | NC_014306.1 | Erwinia billingiae Eb661 |
| 62 | 987500 | 987736 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 63 | 2137994 | 2138230 | - | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 64 | 934251 | 934487 | + | NZ_CP045300.1 | Kosakonia arachidis |
| 65 | 2320692 | 2320928 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 66 | 3033891 | 3034127 | + | NZ_CP014007.2 | Kosakonia oryzae |
| 67 | 2719623 | 2719859 | - | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 68 | 2287841 | 2288077 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 69 | 1456870 | 1457106 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 70 | 2177619 | 2177855 | - | NZ_CP054254.1 | Klebsiella variicola |
| 71 | 5208143 | 5208379 | - | NZ_CP014136.1 | Gibbsiella quercinecans |
| 72 | 2100892 | 2101128 | - | NZ_CP015113.1 | Kosakonia radicincitans |
| 73 | 845092 | 845328 | - | NZ_CP023529.1 | Lelliottia amnigena |
| 74 | 173015 | 173251 | - | NZ_CP049115.1 | Pantoea stewartii |
| 75 | 2589156 | 2589392 | + | NC_017554.1 | Pantoea ananatis PA13 |
| 76 | 2612919 | 2613155 | + | NZ_CP035129.1 | Kosakonia cowanii |
| 77 | 2159709 | 2159945 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 78 | 2348761 | 2348997 | + | NZ_CP006569.1 | Sodalis praecaptivus |
| 79 | 2588481 | 2588717 | + | NZ_AP023184.1 | Buttiauxella agrestis |
| 80 | 1996793 | 1997029 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 81 | 3729373 | 3729609 | - | NZ_CP065640.1 | Serratia rubidaea |
| 82 | 2372856 | 2373092 | - | NZ_LT906479.1 | Serratia ficaria |
| 83 | 1814835 | 1815071 | - | NZ_LN907827.1 | Erwinia gerundensis |
| 84 | 1604290 | 1604526 | - | NZ_CP065534.1 | Lonsdalea populi |
| 85 | 2756851 | 2757087 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 86 | 1822614 | 1822850 | - | NZ_CP015581.1 | Tatumella citrea |
| 87 | 2266140 | 2266376 | + | NZ_CP038853.1 | Pantoea vagans |
| 88 | 1864391 | 1864627 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 89 | 2061442 | 2061678 | - | NZ_LR134340.1 | Escherichia marmotae |
| 90 | 1738999 | 1739235 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 91 | 1757421 | 1757657 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 92 | 1692068 | 1692304 | + | NZ_AP014857.1 | Escherichia albertii |
| 93 | 2357270 | 2357506 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 94 | 1789334 | 1789570 | - | NZ_CP034148.1 | Pantoea agglomerans |
| 95 | 2271312 | 2271548 | + | NZ_CP045720.1 | Pantoea eucalypti |
| 96 | 524137 | 524373 | + | NZ_CP011078.1 | Yersinia ruckeri |
| 97 | 1746036 | 1746272 | - | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 98 | 2059327 | 2059563 | + | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 99 | 1841919 | 1842155 | - | NZ_CP023567.1 | Erwinia pyrifoliae |
| 100 | 789318 | 789554 | + | NZ_CP009787.1 | Yersinia rohdei |
| 101 | 291746 | 291982 | - | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 102 | 3649354 | 3649590 | + | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 103 | 2179426 | 2179662 | - | NZ_CP043727.1 | Yersinia canariae |
| 104 | 2476586 | 2476822 | + | NZ_CP011118.1 | Yersinia enterocolitica |
| 105 | 1687754 | 1687990 | - | NZ_CP032487.1 | Yersinia hibernica |
| 106 | 2424293 | 2424529 | + | NZ_CP046293.1 | Yersinia intermedia |
| 107 | 2380462 | 2380698 | - | NZ_LR134494.1 | Serratia quinivorans |
| 108 | 3799343 | 3799579 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 109 | 4541432 | 4541668 | - | NZ_CP011254.1 | Serratia fonticola |
| 110 | 2652916 | 2653152 | + | NZ_LR134201.1 | Cedecea lapagei |
| 111 | 2885831 | 2886067 | + | NZ_CP023525.1 | Cedecea neteri |
| 112 | 4303665 | 4303901 | + | NZ_CP007230.1 | Yersinia similis |
| 113 | 70080 | 70316 | + | NZ_CP023706.1 | Edwardsiella tarda |
| 114 | 1986503 | 1986739 | + | NZ_CP016043.1 | Edwardsiella hoshinae |
| 115 | 3907916 | 3908152 | + | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 116 | 400716 | 400952 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 117 | 1939150 | 1939386 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 118 | 4237424 | 4237660 | - | NZ_CP011104.1 | Photorhabdus thracensis |
| 119 | 1782158 | 1782394 | - | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 120 | 1769915 | 1770151 | + | NZ_CP067057.1 | Rahnella aceris |
| 121 | 2135001 | 2135237 | - | NZ_CP050150.1 | Hafnia alvei |
| 122 | 3059515 | 3059751 | + | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 123 | 2151148 | 2151384 | - | NC_012962.1 | Photorhabdus asymbiotica |
| 124 | 2002357 | 2002593 | - | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 125 | 1751238 | 1751474 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 126 | 2761029 | 2761265 | + | NZ_LT615367.1 | Dickeya aquatica |
| 127 | 2814573 | 2814809 | + | NZ_CP025799.1 | Dickeya zeae |
| 128 | 1946998 | 1947234 | - | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 129 | 2842071 | 2842307 | + | NZ_CP031560.1 | Dickeya dianthicola |
| 130 | 141100 | 141336 | + | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 131 | 2900378 | 2900614 | + | NC_014500.1 | Dickeya dadantii 3937 |
| 132 | 4814629 | 4814865 | - | NZ_CP009460.1 | Dickeya fangzhongdai |
| 133 | 1528742 | 1528978 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 134 | 1916768 | 1917004 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 135 | 1963797 | 1964033 | - | NC_012880.1 | Musicola paradisiaca Ech703 |
| 136 | 1409201 | 1409437 | + | NZ_CP016176.1 | Xenorhabdus hominickii |
| 137 | 3372184 | 3372420 | + | NZ_CP023536.1 | Providencia alcalifaciens |
| 138 | 2560476 | 2560712 | + | NZ_LS483422.1 | Providencia heimbachae |
| 139 | 2530870 | 2531106 | - | NZ_CP029736.1 | Providencia rettgeri |
| 140 | 1138157 | 1138393 | - | NZ_CP031123.2 | Providencia huaxiensis |
| 141 | 2477817 | 2478053 | + | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 142 | 1867637 | 1867873 | - | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 143 | 3162884 | 3163087 | - | NZ_CP026364.1 | Proteus hauseri |
| 144 | 1645720 | 1645959 | - | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 145 | 1488740 | 1488979 | + | NC_010554.1 | Proteus mirabilis HI4320 |
| 146 | 1887825 | 1888037 | + | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 147 | 1974795 | 1975007 | - | NZ_LR134531.1 | Pragia fontium |
| 148 | 1974991 | 1975203 | + | NZ_LS483470.1 | Leminorella richardii |
| 149 | 1844660 | 1844872 | + | NZ_CP029185.2 | Limnobaculum parvum |
| 150 | 2632880 | 2633116 | + | NZ_CP048796.1 | Providencia vermicola |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP042941.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01458.19 | 0.86 | 128 | 2908 | opposite-strand | SUF system FeS cluster assembly, SufBD |
| 2 | PF00266.21 | 0.86 | 128 | 1666 | opposite-strand | Aminotransferase class-V |
| 3 | PF02657.17 | 0.86 | 128 | 1225.0 | opposite-strand | Fe-S metabolism associated domain |
| 4 | PF17969.3 | 0.97 | 144 | 110.0 | opposite-strand | L,D-transpeptidase C-terminal domain |
| 5 | PF03734.16 | 0.97 | 144 | 110.0 | opposite-strand | L,D-transpeptidase catalytic domain |
| 6 | PF00224.23 | 0.99 | 147 | 311 | same-strand | Pyruvate kinase, barrel domain |
| 7 | PF02887.18 | 0.99 | 147 | 311 | same-strand | Pyruvate kinase, alpha/beta domain |
| 8 | PF00005.29 | 0.82 | 122 | 4163 | opposite-strand | ABC transporter |
++ More..