Result : Q8VUS8
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Quinohemoprotein amine dehydrogenase subunit gamma (QH-AmDH) (EC 1.4.99.-) (Quinohemoprotein amine dehydrogenase 9 kDa subunit) (Quinohemoprotein amine dehydrogenase catalytic subunit) |
| NCBI Accession ID | |
| Organism | Paracoccus denitrificans |
| Left | |
| Right | |
| Strand | |
| Nucleotide Sequence | |
| Sequence | MNALVGCTTSFDPGWEVDAFGAVSNLCQPMEADLYGCADPCWWPAQVADTLNTYPNWSAGADDVMQDWRKLQSVFPETKGSS |
| Source of smORF | Swiss-Prot |
| Function | Catalyzes the oxidative deamination of a wide range of aliphatic and aromatic amines. |
| Pubmed ID | 11717396 |
| Domain | CDD:415286 |
| Functional Category | Others |
| Uniprot ID | Q8VUS8 |
| ORF Length (Amino Acid) | 82 |
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| Conservation Analysis |
No. of Species: 57
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 67813 | 68061 | - | NZ_CP024423.1 | Paracoccus yeei |
| 2 | 30857 | 31105 | - | NZ_CP045074.1 | Paracoccus kondratievae |
| 3 | 741854 | 742096 | - | NZ_CP025430.1 | Paracoccus zhejiangensis |
| 4 | 77136 | 77378 | - | NZ_CP020613.1 | Paracoccus contaminans |
| 5 | 68705 | 68947 | - | NZ_CP065435.1 | Halomonas sp. SS10-MC5 |
| 6 | 1799443 | 1799679 | + | NZ_AP018907.1 | Blastochloris tepida |
| 7 | 4105426 | 4105662 | + | NZ_CP059560.1 | Aromatoleum petrolei |
| 8 | 199728 | 199952 | - | NZ_CP059560.1 | Aromatoleum petrolei |
| 9 | 512028 | 512264 | - | NZ_CP059467.1 | Aromatoleum bremense |
| 10 | 3699648 | 3699890 | + | NZ_CP014646.1 | Thauera humireducens |
| 11 | 4569351 | 4569587 | + | NZ_CP018632.1 | Granulosicoccus antarcticus IMCC3135 |
| 12 | 1420980 | 1421222 | + | NZ_CP016210.1 | Azoarcus olearius |
| 13 | 122618 | 122854 | - | NZ_CP029352.1 | Azospirillum thermophilum |
| 14 | 2647387 | 2647635 | - | NC_015259.1 | Polymorphum gilvum SL003B-26A1 |
| 15 | 3072360 | 3072596 | + | NC_006513.1 | Aromatoleum aromaticum EbN1 |
| 16 | 1305523 | 1305759 | - | NC_006513.1 | Aromatoleum aromaticum EbN1 |
| 17 | 2947545 | 2947784 | - | NZ_CP068551.1 | Pseudomonas khazarica |
| 18 | 1351879 | 1352118 | + | NZ_CP028339.1 | Thauera aromatica K172 |
| 19 | 4473247 | 4473483 | - | NZ_CP037867.1 | Hydrogenophaga pseudoflava |
| 20 | 2752676 | 2752915 | + | NZ_AP022642.1 | Pseudomonas otitidis |
| 21 | 2733895 | 2734134 | + | NZ_AP014862.1 | Pseudomonas furukawaii |
| 22 | 9840 | 10079 | + | NZ_CP012362.1 | Oblitimonas alkaliphila |
| 23 | 52155 | 52397 | + | NZ_CP062806.1 | Cupriavidus basilensis |
| 24 | 2089531 | 2089764 | - | NZ_CP040517.1 | Luteithermobacter gelatinilyticus |
| 25 | 3190689 | 3190928 | - | NZ_CP022562.1 | Pseudomonas monteilii |
| 26 | 2501661 | 2501900 | + | NZ_CP043311.1 | Pseudomonas lalkuanensis |
| 27 | 3206709 | 3206948 | - | NZ_CP047698.1 | Pseudomonas knackmussii |
| 28 | 3141001 | 3141240 | - | NC_008027.1 | Pseudomonas entomophila L48 |
| 29 | 2679985 | 2680224 | + | NZ_CP024159.1 | Pseudomonas mosselii |
| 30 | 3617737 | 3617970 | - | NZ_CP041025.1 | Paremcibacter congregatus |
| 31 | 3199829 | 3200065 | - | NZ_CP041025.1 | Paremcibacter congregatus |
| 32 | 2400399 | 2400638 | - | NZ_CP009365.1 | Pseudomonas soli |
| 33 | 2974720 | 2974959 | - | NZ_CP046621.1 | Pseudomonas alkylphenolica |
| 34 | 841184 | 841423 | - | NZ_CP031146.1 | Pseudomonas plecoglossicida |
| 35 | 2728580 | 2728819 | + | NC_021505.1 | Pseudomonas putida NBRC 14164 |
| 36 | 2488481 | 2488720 | + | NZ_CP015839.1 | Marinobacterium aestuarii |
| 37 | 3169202 | 3169441 | - | NZ_CP015839.1 | Marinobacterium aestuarii |
| 38 | 1285761 | 1286000 | + | NZ_CP043869.1 | Neptunomonas concharum |
| 39 | 1267239 | 1267481 | + | NZ_CP043869.1 | Neptunomonas concharum |
| 40 | 4720571 | 4720810 | - | NZ_LS999205.1 | Pseudomonas protegens CHA0 |
| 41 | 2548386 | 2548625 | + | NZ_CP048833.1 | Pseudomonas multiresinivorans |
| 42 | 3296897 | 3297136 | + | NZ_CP014158.1 | Pseudomonas citronellolis |
| 43 | 2730691 | 2730933 | - | NZ_AP014545.1 | Amphritea japonica ATCC BAA-1530 |
| 44 | 2741282 | 2741524 | - | NZ_AP014545.1 | Amphritea japonica ATCC BAA-1530 |
| 45 | 4669752 | 4669991 | - | NZ_CP061079.1 | Pseudomonas chlororaphis |
| 46 | 728005 | 728244 | + | NZ_CP053840.1 | Arcobacter venerupis |
| 47 | 733511 | 733747 | + | NZ_CP053840.1 | Arcobacter venerupis |
| 48 | 4943879 | 4944118 | - | NZ_CP051487.1 | Pseudomonas umsongensis |
| 49 | 2297001 | 2297240 | + | NZ_CP018839.1 | Thauera chlorobenzoica |
| 50 | 4600421 | 4600660 | - | NZ_CP014870.1 | Pseudomonas silesiensis |
| 51 | 4281446 | 4281685 | - | NZ_CP029608.1 | Pseudomonas kribbensis |
| 52 | 4495166 | 4495405 | - | NZ_CP062253.1 | Pseudomonas gozinkensis |
| 53 | 4535676 | 4535915 | - | NZ_CP062252.1 | Pseudomonas allokribbensis |
| 54 | 1633710 | 1633949 | - | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 55 | 621906 | 622145 | + | NZ_CP032097.1 | Arcobacter ellisii |
| 56 | 451120 | 451356 | + | NC_017187.1 | Aliarcobacter butzleri ED-1 |
| 57 | 1343789 | 1344025 | + | NZ_CP053835.1 | Arcobacter defluvii |
| 58 | 605452 | 605688 | + | NZ_CP053835.1 | Arcobacter defluvii |
| 59 | 6910 | 7149 | + | NZ_CP041161.1 | Leisingera aquaemixtae |
| 60 | 604588 | 604824 | + | NZ_CP032100.1 | Arcobacter suis CECT 7833 |
| 61 | 1839670 | 1839906 | - | NZ_CP041070.1 | Arcobacter anaerophilus |
| 62 | 3247349 | 3247588 | - | NC_023135.1 | Leisingera methylohalidivorans DSM 14336 |
| 63 | 1805494 | 1805730 | - | NZ_CP032098.1 | Malaciobacter molluscorum LMG 25693 |
| 64 | 670350 | 670568 | - | NZ_CP022746.1 | Sphingobium xenophagum |
| 65 | 3072885 | 3073112 | - | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP024423.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF04055.23 | 0.96 | 55 | 86.0 | same-strand | Radical SAM superfamily |
| 2 | PF09098.12 | 0.98 | 56 | 1557 | same-strand | Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding |
| 3 | PF09100.12 | 1.0 | 57 | 1556.5 | same-strand | Quinohemoprotein amine dehydrogenase, alpha subunit domain IV |
| 4 | PF14930.8 | 0.98 | 56 | 1557 | same-strand | Quinohemoprotein amine dehydrogenase, alpha subunit domain II |
| 5 | PF09099.12 | 0.91 | 52 | 1564 | same-strand | Quinohemoprotein amine dehydrogenase, alpha subunit domain III |
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