Result : A9GWV1
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 50S ribosomal protein L32 |
| NCBI Accession ID | AM746676.1 |
| Organism | Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain So ce56)) |
| Left | 5314990 |
| Right | 5315184 |
| Strand | - |
| Nucleotide Sequence | GTGGCCGTCCCCAAGAGGAAAACCACCCCCAGCAAGCGCGACATGCGGCGCGCCAACCACGACAAGGTGACCCCCGTCCAGCTCGTCTCTTGCGAGAACTGCGGGGAAGCCCGGCTCCCGCACCGCGCCTGTGGCGCCTGCGGGCACTACAACGGGCGCAAGGCGAAGGCGACCAAGGCGACCGCGGCCTCATGA |
| Sequence | MAVPKRKTTPSKRDMRRANHDKVTPVQLVSCENCGEARLPHRACGACGHYNGRKAKATKATAAS |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl09115. Profile Description: Ribosomal L32p protein family. This protein describes bacterial ribosomal protein L32. The noise cutoff is set low enough to include the equivalent protein from mitochondria and chloroplasts. No related proteins from the Archaea nor from the eukaryotic cytosol are detected by this model. This model is a fragment model; the putative L32 of some species shows similarity only toward the N-terminus. [Protein synthesis, Ribosomal proteins: synthesis and modification] |
| Pubmed ID | 17965706 |
| Domain | CDD:415589 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | A9GWV1 |
| ORF Length (Amino Acid) | 64 |
++ More..
| Conservation Analysis |
No. of Species: 221
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 5314990 | 5315184 | - | NC_010162.1 | Sorangium cellulosum So ce56 |
| 2 | 3444015 | 3444206 | - | NZ_CP016211.1 | Minicystis rosea |
| 3 | 5499283 | 5499480 | + | NZ_CP012159.1 | Chondromyces crocatus |
| 4 | 10899374 | 10899562 | + | NZ_CP012333.1 | Labilithrix luteola |
| 5 | 1951888 | 1952067 | - | NZ_CP045434.1 | Sphingomonas ginsengisoli An et al. 2013 |
| 6 | 938269 | 938448 | + | NZ_CP041659.1 | Sphingomonas xanthus |
| 7 | 4476197 | 4476394 | + | NZ_CP011125.1 | Sandaracinus amylolyticus |
| 8 | 617435 | 617614 | - | NZ_CP060718.1 | Sphingomonas lutea |
| 9 | 2544446 | 2544625 | - | NZ_CP060717.1 | Sphingomonas rhizophila |
| 10 | 2503337 | 2503513 | + | NZ_CP020083.1 | Blastomonas fulva |
| 11 | 837141 | 837320 | + | NZ_CP060780.1 | Sphingomonas daechungensis |
| 12 | 72063 | 72242 | + | NZ_CP060782.1 | Sphingomonas sediminicola |
| 13 | 699778 | 699957 | - | NZ_CP022745.1 | Sphingobium xenophagum |
| 14 | 1601762 | 1601941 | - | NZ_CP053015.1 | Sphingomonas lacunae |
| 15 | 1498170 | 1498349 | + | NZ_CP014168.1 | Sphingomonas panacis |
| 16 | 89918 | 90097 | + | NZ_CP042306.1 | Sphingomonas panacisoli |
| 17 | 2557118 | 2557300 | + | NC_007626.1 | Magnetospirillum magneticum AMB-1 |
| 18 | 4578120 | 4578299 | - | NZ_CP061038.1 | Sphingomonas alpina |
| 19 | 5366660 | 5366839 | + | NZ_CP006644.1 | Sphingomonas sanxanigenens DSM 19645 = NX02 |
| 20 | 2910463 | 2910642 | - | NZ_CP035765.1 | Sphingomonas paucimobilis |
| 21 | 3849881 | 3850060 | - | NZ_CP009571.1 | Sphingomonas taxi |
| 22 | 1204701 | 1204889 | - | NC_023065.1 | Magnetospirillum gryphiswaldense MSR-1 v2 |
| 23 | 1950491 | 1950670 | - | NC_006526.2 | Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 |
| 24 | 3915249 | 3915428 | + | NC_009511.1 | Sphingomonas wittichii RW1 |
| 25 | 1542477 | 1542656 | - | NZ_CP018221.1 | Tardibacter chloracetimidivorans |
| 26 | 1741032 | 1741214 | + | NZ_CP014525.1 | Haematospirillum jordaniae |
| 27 | 2516040 | 2516219 | - | NC_007794.1 | Novosphingobium aromaticivorans DSM 12444 |
| 28 | 4376911 | 4377090 | + | NZ_CP010836.1 | Sphingomonas hengshuiensis |
| 29 | 1387710 | 1387889 | + | NZ_CP009122.1 | Sphingopyxis fribergensis |
| 30 | 3052309 | 3052488 | - | NZ_CP009429.1 | Sphingopyxis macrogoltabida |
| 31 | 1473583 | 1473762 | - | NC_008048.1 | Sphingopyxis alaskensis RB2256 |
| 32 | 3717708 | 3717887 | + | NZ_AP017655.1 | Sphingobium cloacae |
| 33 | 4600859 | 4601038 | - | NZ_CP023449.1 | Rhizorhabdus dicambivorans |
| 34 | 2422914 | 2423093 | + | NZ_CP023705.1 | Sphingomonas melonis |
| 35 | 588105 | 588284 | + | NZ_CP009291.1 | Novosphingobium pentaromativorans US6-1 |
| 36 | 2100356 | 2100535 | + | NZ_CP020538.1 | Sphingobium herbicidovorans |
| 37 | 2777768 | 2777947 | - | NC_009633.1 | Alkaliphilus metalliredigens QYMF |
| 38 | 4796897 | 4797082 | + | NZ_CP030265.1 | Skermanella pratensis |
| 39 | 2232636 | 2232818 | + | NZ_CP042906.1 | Hypericibacter terrae |
| 40 | 2515516 | 2515695 | - | NZ_CP060035.1 | Sphingobium fuliginis |
| 41 | 3218329 | 3218508 | + | NC_014006.1 | Sphingobium japonicum UT26S |
| 42 | 2948786 | 2948965 | - | NZ_CP042345.1 | Novosphingobium ginsenosidimutans |
| 43 | 1269641 | 1269823 | + | NZ_CP025286.1 | Ethanoligenens harbinense YUAN-3 |
| 44 | 82873 | 83049 | - | NZ_CP016033.1 | Erythrobacter neustonensis |
| 45 | 1574868 | 1575050 | - | NZ_CP030126.1 | Indioceanicola profundi |
| 46 | 2534925 | 2535104 | - | NC_009943.1 | Desulfococcus oleovorans Hxd3 |
| 47 | 1292070 | 1292249 | + | NZ_CP060052.1 | Croceicoccus marinus |
| 48 | 1329320 | 1329502 | - | NZ_CP037948.1 | Qipengyuania sediminis |
| 49 | 7703036 | 7703236 | + | NZ_CP042425.1 | Limnoglobus roseus |
| 50 | 1723039 | 1723245 | - | NZ_CP034588.1 | Silicimonas algicola |
| 51 | 1836028 | 1836207 | + | NZ_CP016591.1 | Tsuneonella dongtanensis |
| 52 | 759043 | 759231 | - | NZ_CP025612.1 | Niveispirillum cyanobacteriorum |
| 53 | 2226730 | 2226912 | + | NZ_AP019700.1 | Stella humosa |
| 54 | 3020453 | 3020635 | - | NZ_CP042582.1 | Hypericibacter adhaerens |
| 55 | 1716330 | 1716509 | - | NC_018664.1 | Gottschalkia acidurici 9a |
| 56 | 133703 | 133906 | - | NZ_CP032485.1 | Neokomagataea tanensis |
| 57 | 969534 | 969737 | + | NZ_CP014681.1 | Kozakia baliensis |
| 58 | 964064 | 964240 | + | NZ_CP036523.1 | Peptacetobacter hiranonis |
| 59 | 1742962 | 1743165 | - | NZ_CP042808.1 | Acetobacter oryzoeni |
| 60 | 641168 | 641371 | - | NC_021991.1 | Acetobacter pasteurianus 386B |
| 61 | 1395646 | 1395849 | - | NZ_CP015164.1 | Acetobacter ascendens |
| 62 | 1965937 | 1966140 | - | NZ_CP022374.1 | Acetobacter oryzifermentans |
| 63 | 2001719 | 2001904 | - | NC_017956.1 | Tistrella mobilis KA081020-065 |
| 64 | 1206868 | 1207050 | - | NZ_LT632322.1 | Murdochiella vaginalis |
| 65 | 1177006 | 1177209 | + | NZ_AP014690.1 | Asaia bogorensis NBRC 16594 |
| 66 | 1136158 | 1136340 | - | NC_017059.1 | Pararhodospirillum photometricum DSM 122 |
| 67 | 2471858 | 2472061 | - | NZ_CP053708.1 | Lichenicola cladoniae |
| 68 | 739028 | 739213 | + | NC_017161.1 | Hydrogenobacter thermophilus TK-6 |
| 69 | 4250446 | 4250622 | - | NZ_AP018449.1 | Methylomusa anaerophila |
| 70 | 3720902 | 3721084 | - | NZ_CP061799.1 | Desulfonema limicola |
| 71 | 851166 | 851348 | + | NZ_CP018799.1 | Mariprofundus aestuarium |
| 72 | 344230 | 344433 | - | NC_015186.1 | Acidiphilium multivorum AIU301 |
| 73 | 402507 | 402686 | + | NZ_CP015519.1 | Syntrophotalea acetylenivorans |
| 74 | 1384765 | 1384971 | - | NZ_CP061202.1 | Rhodobacter capsulatus |
| 75 | 2674036 | 2674242 | + | NZ_CP004393.1 | Celeribacter indicus |
| 76 | 2979542 | 2979745 | + | NZ_LN606600.1 | Acetobacter senegalensis |
| 77 | 1353164 | 1353367 | + | NZ_CP062147.1 | Komagataeibacter hansenii |
| 78 | 1457822 | 1458007 | + | NZ_CP007514.1 | Rubrobacter radiotolerans |
| 79 | 1216211 | 1216414 | - | NZ_CP036404.1 | Komagataeibacter saccharivorans |
| 80 | 895185 | 895364 | - | NZ_CP022889.1 | Tsuneonella mangrovi |
| 81 | 896379 | 896558 | + | NZ_CP030777.1 | Faecalibacterium prausnitzii |
| 82 | 1504173 | 1504355 | - | NZ_CP018800.1 | Mariprofundus ferrinatatus |
| 83 | 1146914 | 1147090 | - | NC_016630.1 | Filifactor alocis ATCC 35896 |
| 84 | 721994 | 722170 | - | NC_016630.1 | Filifactor alocis ATCC 35896 |
| 85 | 1557793 | 1557969 | + | NC_009922.1 | Alkaliphilus oremlandii OhILAs |
| 86 | 2214549 | 2214731 | - | NZ_CP011310.1 | Aurantiacibacter atlanticus |
| 87 | 1061168 | 1061371 | - | NC_016027.1 | Komagataeibacter medellinensis NBRC 3288 |
| 88 | 875448 | 875651 | - | NZ_CP019875.1 | Komagataeibacter nataicola |
| 89 | 2298754 | 2298957 | - | NZ_CP050139.1 | Komagataeibacter rhaeticus |
| 90 | 2535783 | 2535959 | - | NC_015275.1 | Cellulosilyticum lentocellum DSM 5427 |
| 91 | 2190921 | 2191100 | - | NZ_CP010802.1 | Desulfuromonas soudanensis |
| 92 | 261459 | 261665 | - | NZ_CP020470.1 | Rhodobacter blasticus |
| 93 | 1419168 | 1419353 | - | NZ_CP026328.2 | Acidithiobacillus caldus |
| 94 | 981282 | 981461 | - | NZ_CP011452.2 | Croceibacterium atlanticum |
| 95 | 2361632 | 2361835 | + | NZ_CP029176.1 | Acidibrevibacterium fodinaquatile |
| 96 | 3382287 | 3382469 | + | NZ_AP021874.1 | Desulfosarcina alkanivorans |
| 97 | 1681429 | 1681605 | + | NC_007498.2 | Syntrophotalea carbinolica DSM 2380 |
| 98 | 3375831 | 3376034 | - | NZ_CP043043.1 | Gluconobacter thailandicus |
| 99 | 1845472 | 1845651 | - | NC_016803.1 | Pseudodesulfovibrio mercurii |
| 100 | 1775742 | 1775924 | + | NZ_CP009788.1 | Geobacter pickeringii |
| 101 | 1901972 | 1902148 | + | NZ_CP036259.1 | Sporomusa termitida |
| 102 | 5672539 | 5672721 | - | NZ_AP021876.1 | Desulfosarcina ovata subsp. sediminis |
| 103 | 3192208 | 3192414 | - | NZ_CP014327.1 | Halocynthiibacter arcticus |
| 104 | 1900192 | 1900371 | - | NC_015437.1 | Selenomonas sputigena ATCC 35185 |
| 105 | 75057 | 75236 | - | NZ_CP034179.1 | Caenibius tardaugens NBRC 16725 |
| 106 | 2641561 | 2641740 | - | NC_014365.1 | Desulfarculus baarsii DSM 2075 |
| 107 | 1977511 | 1977708 | + | NZ_CP051131.1 | Parasphingopyxis algicola |
| 108 | 2052681 | 2052863 | - | NZ_CP016545.1 | Paraurantiacibacter namhicola |
| 109 | 2774579 | 2774764 | + | NZ_AP018795.1 | Acidithiobacillus ferridurans |
| 110 | 1661322 | 1661507 | + | NC_011761.1 | Acidithiobacillus ferrooxidans ATCC 23270 |
| 111 | 553396 | 553602 | - | NZ_CP022196.1 | Celeribacter ethanolicus |
| 112 | 2951180 | 2951356 | - | NZ_CP014150.1 | Paeniclostridium sordellii |
| 113 | 442707 | 442886 | - | NZ_CP053921.1 | Erythrobacter mangrovi |
| 114 | 1816550 | 1816729 | + | NZ_CP046400.1 | Pseudodesulfovibrio cashew |
| 115 | 1555259 | 1555438 | - | NZ_CP011805.1 | Pelagerythrobacter marensis |
| 116 | 1670019 | 1670201 | + | NZ_CP010311.1 | Geoalkalibacter subterraneus |
| 117 | 2856026 | 2856217 | + | NC_008639.1 | Chlorobium phaeobacteroides DSM 266 |
| 118 | 1257525 | 1257704 | + | NZ_AP019004.1 | Phascolarctobacterium faecium |
| 119 | 6878882 | 6879076 | + | NZ_CP053452.2 | Frigoriglobus tundricola |
| 120 | 5381 | 5569 | - | NZ_CP012033.1 | Levilactobacillus koreensis |
| 121 | 2780422 | 2780598 | - | NZ_CP019870.1 | Clostridioides difficile |
| 122 | 1219759 | 1219935 | + | NC_018025.1 | Desulfomonile tiedjei DSM 6799 |
| 123 | 128608 | 128811 | - | NZ_CP038141.1 | Swingsia samuiensis |
| 124 | 3034510 | 3034689 | - | NC_014844.1 | Pseudodesulfovibrio aespoeensis Aspo-2 |
| 125 | 1455052 | 1455237 | + | NC_015942.1 | Acidithiobacillus ferrivorans SS3 |
| 126 | 984332 | 984517 | + | NZ_CP045571.1 | Acidithiobacillus thiooxidans ATCC 19377 |
| 127 | 655988 | 656170 | + | NC_014958.1 | Deinococcus maricopensis DSM 21211 |
| 128 | 5370848 | 5371042 | - | NZ_CP036273.1 | Urbifossiella limnaea |
| 129 | 6400738 | 6400911 | - | NC_017672.3 | Paenibacillus mucilaginosus K02 |
| 130 | 182741 | 182935 | - | NZ_CP034413.2 | Dysosmobacter welbionis |
| 131 | 2763060 | 2763239 | + | NZ_LT907975.1 | Pseudodesulfovibrio profundus |
| 132 | 1798827 | 1799009 | + | NC_007517.1 | Geobacter metallireducens GS-15 |
| 133 | 720351 | 720530 | - | NC_012881.1 | Maridesulfovibrio salexigens DSM 2638 |
| 134 | 1243941 | 1244126 | + | NZ_CP029353.1 | Azospirillum thermophilum |
| 135 | 1800247 | 1800453 | + | NZ_CP003984.1 | Planktomarina temperata RCA23 |
| 136 | 621077 | 621259 | + | NZ_CP045563.1 | Fructilactobacillus sanfranciscensis |
| 137 | 197494 | 197685 | - | NC_011060.1 | Pelodictyon phaeoclathratiforme BU-1 |
| 138 | 644575 | 644769 | + | NC_016024.1 | Chloracidobacterium thermophilum B |
| 139 | 1313964 | 1314170 | + | NZ_CP042261.1 | Qingshengfaniella alkalisoli |
| 140 | 1394513 | 1394719 | - | NZ_CP021404.1 | Pacificitalea manganoxidans |
| 141 | 652334 | 652516 | + | NC_015388.1 | Desulfobacca acetoxidans DSM 11109 |
| 142 | 7257131 | 7257313 | - | NZ_CP061800.1 | Desulfonema magnum |
| 143 | 1586935 | 1587129 | + | NC_006177.1 | Symbiobacterium thermophilum IAM 14863 |
| 144 | 2144480 | 2144671 | - | NZ_AP018437.1 | Pelolinea submarina |
| 145 | 1276465 | 1276644 | + | NZ_CP015963.1 | Altererythrobacter ishigakiensis |
| 146 | 8510211 | 8510405 | - | NZ_LR593886.1 | Gemmata massiliana |
| 147 | 3248592 | 3248771 | - | NC_011891.1 | Anaeromyxobacter dehalogenans 2CP-1 |
| 148 | 2049283 | 2049465 | - | NZ_CP011389.1 | Deinococcus soli (ex Cha et al. 2016) |
| 149 | 245826 | 246008 | - | NZ_CP013910.1 | Deinococcus actinosclerus |
| 150 | 2588071 | 2588244 | + | NZ_CP013023.1 | Paenibacillus bovis |
| 151 | 13862 | 14044 | + | NC_008025.1 | Deinococcus geothermalis DSM 11300 |
| 152 | 4827568 | 4827741 | - | NZ_CP026520.1 | Paenibacillus chitinolyticus |
| 153 | 1375769 | 1375948 | + | NZ_CP045851.1 | Actinomarinicola tropica |
| 154 | 790989 | 791171 | + | NZ_CP045508.1 | Desulfolutivibrio sulfoxidireducens |
| 155 | 4111825 | 4112007 | + | NZ_AP021875.1 | Desulfosarcina widdelii |
| 156 | 1208599 | 1208778 | - | NC_015318.1 | Hippea maritima DSM 10411 |
| 157 | 2313017 | 2313196 | - | NZ_AP019389.1 | Qipengyuania flava |
| 158 | 2535175 | 2535354 | - | NZ_CP031357.1 | Erythrobacter aureus |
| 159 | 2605547 | 2605738 | + | NZ_CP017305.1 | Chlorobaculum limnaeum |
| 160 | 151834 | 152025 | - | NC_011027.1 | Chlorobaculum parvum NCIB 8327 |
| 161 | 3629802 | 3629984 | + | NZ_CP045504.1 | Desulfovibrio sulfodismutans DSM 3696 |
| 162 | 2459327 | 2459506 | + | NZ_CP024920.1 | Qipengyuania seohaensis |
| 163 | 1593344 | 1593523 | - | NZ_CP012669.1 | Altererythrobacter epoxidivorans |
| 164 | 1397863 | 1398042 | + | NZ_CP014230.1 | Desulfomicrobium orale DSM 12838 |
| 165 | 189735 | 189926 | - | NC_010803.1 | Chlorobium limicola DSM 245 |
| 166 | 1843396 | 1843578 | + | NZ_CP029494.1 | Deinococcus irradiatisoli |
| 167 | 1343755 | 1343928 | + | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 168 | 7979694 | 7979867 | - | NC_022657.1 | Actinoplanes friuliensis DSM 7358 |
| 169 | 949528 | 949707 | + | NZ_LT635479.1 | Lachnoclostridium phocaeense |
| 170 | 1704635 | 1704817 | + | NC_008554.1 | Syntrophobacter fumaroxidans MPOB |
| 171 | 1475489 | 1475668 | + | NZ_CP039543.1 | Desulfovibrio marinus |
| 172 | 3399830 | 3400015 | + | NZ_CP041636.1 | Ferrovibrio terrae |
| 173 | 2393360 | 2393542 | - | NC_014833.1 | Ruminococcus albus 7 = DSM 20455 |
| 174 | 621022 | 621201 | - | NC_014836.1 | Desulfurispirillum indicum S5 |
| 175 | 616419 | 616601 | - | NZ_CP026538.1 | Desulfovibrio carbinolicus |
| 176 | 4516654 | 4516836 | + | NC_012796.1 | Desulfovibrio magneticus RS-1 |
| 177 | 1709030 | 1709215 | + | NC_016751.1 | Marinitoga piezophila KA3 |
| 178 | 7178444 | 7178617 | - | NZ_CP023865.1 | Actinoplanes teichomyceticus ATCC 31121 |
| 179 | 1628353 | 1628535 | - | NC_014632.1 | Ilyobacter polytropus DSM 2926 |
| 180 | 147710 | 147901 | - | NC_007512.1 | Pelodictyon luteolum DSM 273 |
| 181 | 1239944 | 1240135 | + | NZ_CP014159.1 | Aerococcus christensenii |
| 182 | 239050 | 239232 | + | NZ_CP042909.1 | Thermosulfurimonas marina |
| 183 | 790698 | 790880 | + | NZ_CP028102.1 | Fusobacterium mortiferum ATCC 9817 |
| 184 | 92695 | 92874 | - | NC_013173.1 | Desulfomicrobium baculatum DSM 4028 |
| 185 | 5101111 | 5101296 | + | NZ_CP041146.1 | Nocardioides humi |
| 186 | 1411746 | 1411919 | + | NC_014391.1 | Micromonospora aurantiaca ATCC 27029 |
| 187 | 4077467 | 4077640 | - | NZ_CP024035.1 | Priestia aryabhattai |
| 188 | 1402114 | 1402299 | + | NC_008148.1 | Rubrobacter xylanophilus DSM 9941 |
| 189 | 1445305 | 1445478 | + | NC_009380.1 | Salinispora tropica CNB-440 |
| 190 | 1379887 | 1380069 | + | NZ_AP017470.1 | Thermotomaculum hydrothermale |
| 191 | 1127558 | 1127731 | - | NZ_CP061725.1 | Micromonospora craniellae |
| 192 | 431289 | 431483 | - | NZ_CP006712.1 | Bifidobacterium breve JCM 7017 |
| 193 | 2233413 | 2233607 | - | NZ_CP062938.1 | Bifidobacterium eulemuris |
| 194 | 588049 | 588243 | + | NZ_CP062948.1 | Bifidobacterium lemurum |
| 195 | 433463 | 433657 | - | NZ_CP026999.1 | Bifidobacterium longum |
| 196 | 7661405 | 7661578 | - | NC_017093.1 | Actinoplanes missouriensis 431 |
| 197 | 660117 | 660299 | - | NZ_CP028103.1 | Fusobacterium varium ATCC 27725 |
| 198 | 1873578 | 1873760 | + | NZ_CP028105.1 | Fusobacterium ulcerans |
| 199 | 970144 | 970329 | + | NZ_CP020330.1 | Martelella mediterranea DSM 17316 |
| 200 | 1959833 | 1960015 | - | NZ_CP047045.1 | Terricaulis silvestris |
| 201 | 2614224 | 2614418 | - | NC_016629.1 | Desulfocurvibacter africanus subsp. africanus str. Walvis Bay |
| 202 | 264938 | 265132 | - | NZ_AP012325.1 | Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043 |
| 203 | 311649 | 311843 | - | NZ_CP025199.1 | Bifidobacterium pseudocatenulatum |
| 204 | 3572256 | 3572441 | - | NZ_CP022295.1 | Nocardioides aromaticivorans |
| 205 | 3726314 | 3726499 | - | NZ_CP009896.1 | Pimelobacter simplex |
| 206 | 3201795 | 3201980 | - | NZ_CP059164.1 | Nocardioides ungokensis |
| 207 | 569376 | 569561 | + | NZ_CP041091.1 | Nocardioides sambongensis |
| 208 | 1460217 | 1460399 | + | NZ_CP016353.1 | Prauserella marina |
| 209 | 210808 | 210993 | - | NZ_CP038436.1 | Nocardioides seonyuensis |
| 210 | 3812757 | 3812942 | + | NZ_CP038267.1 | Nocardioides euryhalodurans |
| 211 | 819894 | 820076 | + | NZ_CP071057.1 | Marinicauda algicola |
| 212 | 9086164 | 9086337 | + | NZ_AP022870.1 | Phytohabitans flavus |
| 213 | 192715 | 192888 | + | NZ_CP045309.1 | Micromonospora terminaliae |
| 214 | 282346 | 282531 | + | NZ_CP044344.1 | Nocardioides cynanchi |
| 215 | 1099545 | 1099730 | + | NZ_CP049257.1 | Nocardioides anomalus |
| 216 | 2371068 | 2371250 | + | NZ_AP017378.1 | Desulfovibrio ferrophilus |
| 217 | 1858983 | 1859156 | + | NZ_CP058322.1 | Micromonospora carbonacea |
| 218 | 5229953 | 5230126 | + | NZ_AP022871.1 | Phytohabitans suffuscus |
| 219 | 1374517 | 1374711 | - | NZ_CP044548.2 | Janibacter melonis |
| 220 | 4681865 | 4682038 | + | NZ_CP009922.3 | Streptomyces xiamenensis |
| 221 | 4780467 | 4780640 | + | NZ_CP054938.1 | Streptomyces harbinensis |
| 222 | 1615903 | 1616091 | + | NZ_CP048877.1 | Thermosulfuriphilus ammonigenes |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_007626.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF08541.12 | 0.68 | 150 | 1101.0 | same-strand | 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal |
| 2 | PF08545.12 | 0.68 | 150 | 1101.0 | same-strand | 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III |
| 3 | PF02620.19 | 0.64 | 142 | 55 | same-strand | Large ribosomal RNA subunit accumulation protein YceD |
| 4 | PF02504.17 | 0.71 | 156 | 32.0 | same-strand | Fatty acid synthesis protein |
++ More..