Result : Q8RHW1
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 30S ribosomal protein S20 |
| NCBI Accession ID | AE009951.2 |
| Organism | Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355) |
| Left | 367295 |
| Right | 367567 |
| Strand | + |
| Nucleotide Sequence | ATGGCAAATTCAAAATCAGCTAAAAAGAGAATATTAGTAGCAGAAAGAAATAGAGTTAGAAATCAAGCAGTTAAAACAAGAGTTAAAACTATGGCTAAAAAAGTTTTATCTACAATAGAAGTGAAAGATGTTGAAGCTGCAAAGGTAGCATTATCAGTTGCATATAAAGAATTTGATAAGGCTGTAAGTAAAGGAATTTTAAAGAAAAATACTGCTTCTAGAAAGAAAGCTAGATTAGCAGCAAAAGTTAATTCTTTAGTAAGTTCTCTTTAA |
| Sequence | MANSKSAKKRILVAERNRVRNQAVKTRVKTMAKKVLSTIEVKDVEAAKVALSVAYKEFDKAVSKGILKKNTASRKKARLAAKVNSLVSSL |
| Source of smORF | Swiss-Prot |
| Function | Binds directly to 16S ribosomal RNA. {ECO:0000255|HAMAP-Rule:MF_00500}. |
| Pubmed ID | 11889109 |
| Domain | CDD:412349 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | Q8RHW1 |
| ORF Length (Amino Acid) | 90 |
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| Conservation Analysis |
No. of Species: 83
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 573593 | 573865 | - | NZ_CP068114.1 | Fusobacterium canifelinum |
| 2 | 491196 | 491468 | - | NZ_LN831027.1 | Fusobacterium nucleatum subsp. polymorphum |
| 3 | 1940508 | 1940780 | - | NZ_CP024699.1 | Fusobacterium pseudoperiodonticum |
| 4 | 211014 | 211286 | + | NZ_CP013336.1 | Fusobacterium hwasookii ChDC F206 |
| 5 | 3172225 | 3172485 | - | NZ_CP028103.1 | Fusobacterium varium ATCC 27725 |
| 6 | 2552665 | 2552925 | + | NZ_CP028105.1 | Fusobacterium ulcerans |
| 7 | 1515637 | 1515897 | - | NZ_CP028102.1 | Fusobacterium mortiferum ATCC 9817 |
| 8 | 847511 | 847771 | + | NZ_CP028106.1 | Fusobacterium gonidiaformans ATCC 25563 |
| 9 | 945975 | 946235 | + | NZ_CP028107.1 | Fusobacterium necrophorum subsp. funduliforme |
| 10 | 1009971 | 1010237 | + | NZ_AP019822.1 | Pseudoleptotrichia goodfellowii |
| 11 | 1474051 | 1474311 | + | NC_014632.1 | Ilyobacter polytropus DSM 2926 |
| 12 | 528488 | 528754 | - | NZ_AP019827.1 | Leptotrichia shahii |
| 13 | 601532 | 601798 | - | NC_013515.1 | Streptobacillus moniliformis DSM 12112 |
| 14 | 1887370 | 1887636 | - | NC_013192.1 | Leptotrichia buccalis C-1013-b |
| 15 | 2059456 | 2059722 | + | NZ_AP019845.1 | Leptotrichia trevisanii |
| 16 | 1541914 | 1542180 | + | NZ_AP019846.1 | Leptotrichia hongkongensis |
| 17 | 1682639 | 1682905 | + | NZ_AP019829.2 | Leptotrichia wadei |
| 18 | 945760 | 946041 | - | NC_003869.1 | Caldanaerobacter subterraneus subsp. tengcongensis MB4 |
| 19 | 735899 | 736177 | - | NC_013522.1 | Thermanaerovibrio acidaminovorans DSM 6589 |
| 20 | 3315510 | 3315773 | - | NZ_CP070062.1 | Coprococcus comes |
| 21 | 1111331 | 1111594 | - | NZ_LN879430.1 | Herbinix luporum |
| 22 | 3454838 | 3455107 | + | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 23 | 1063696 | 1063980 | - | NC_015958.1 | Thermoanaerobacter wiegelii Rt8.B1 |
| 24 | 955400 | 955681 | - | NC_014209.1 | Thermoanaerobacter mathranii subsp. mathranii str. A3 |
| 25 | 938107 | 938388 | - | NC_013921.1 | Thermoanaerobacter italicus Ab9 |
| 26 | 3070690 | 3070953 | + | NZ_CP036170.1 | [Clostridium] scindens ATCC 35704 |
| 27 | 3384197 | 3384460 | - | NZ_CP048000.1 | Anaerocolumna sedimenticola |
| 28 | 3125387 | 3125653 | - | NZ_CP012395.1 | Clostridium autoethanogenum DSM 10061 |
| 29 | 875801 | 876067 | - | NC_014328.1 | Clostridium ljungdahlii DSM 13528 |
| 30 | 3359032 | 3359298 | + | NZ_CP011663.1 | Clostridium sporogenes |
| 31 | 2067748 | 2068014 | + | NZ_CP041666.1 | Radiobacillus deserti |
| 32 | 2402608 | 2402874 | + | NZ_CP014170.1 | Clostridium tyrobutyricum |
| 33 | 1418990 | 1419256 | - | NC_015687.1 | Clostridium acetobutylicum DSM 1731 |
| 34 | 3126925 | 3127191 | + | NZ_CP028842.1 | Clostridium botulinum |
| 35 | 3083177 | 3083440 | + | NZ_AP023367.1 | Anaerocolumna cellulosilytica |
| 36 | 1228713 | 1228994 | + | NZ_AP013035.1 | Thermosulfidibacter takaii ABI70S6 |
| 37 | 2338140 | 2338403 | - | NC_015275.1 | Cellulosilyticum lentocellum DSM 5427 |
| 38 | 348241 | 348513 | - | NC_007503.1 | Carboxydothermus hydrogenoformans Z-2901 |
| 39 | 855604 | 855867 | + | NZ_CP027002.1 | [Ruminococcus] gnavus ATCC 29149 |
| 40 | 1093862 | 1094128 | - | NZ_LS483427.1 | Arcanobacterium haemolyticum |
| 41 | 1195561 | 1195824 | - | NC_022571.1 | Clostridium saccharobutylicum DSM 13864 |
| 42 | 1326017 | 1326283 | - | NZ_CP061539.1 | Rothia terrae |
| 43 | 2744211 | 2744474 | + | NZ_CP030280.1 | Blautia argi |
| 44 | 1246787 | 1247053 | - | NC_010718.1 | Natranaerobius thermophilus JW/NM-WN-LF |
| 45 | 1144337 | 1144603 | + | NZ_CP070228.1 | Arcanobacterium phocisimile |
| 46 | 1243220 | 1243483 | - | NZ_CP056080.1 | Rothia nasimurium |
| 47 | 1262442 | 1262705 | - | NZ_CP061538.1 | Rothia amarae |
| 48 | 775890 | 776153 | - | NZ_CP022413.2 | Blautia hansenii DSM 20583 |
| 49 | 1466505 | 1466774 | + | NZ_AP023212.1 | Hydrogenimonas urashimensis |
| 50 | 2992676 | 2992939 | + | NZ_LR027880.1 | Roseburia intestinalis L1-82 |
| 51 | 1734855 | 1735127 | + | NZ_CP035492.1 | Paenibacillus protaetiae |
| 52 | 1228996 | 1229259 | - | NZ_LR699011.1 | Roseburia hominis |
| 53 | 1560839 | 1561102 | - | NZ_CP036345.1 | Anaerostipes caccae L1-92 |
| 54 | 3827086 | 3827352 | + | NZ_CP017703.1 | Aeribacillus pallidus |
| 55 | 4014116 | 4014388 | + | NC_014664.1 | Rhodomicrobium vannielii ATCC 17100 |
| 56 | 2102622 | 2102882 | + | NZ_CP054051.1 | Aliarcobacter cibarius |
| 57 | 1981373 | 1981636 | + | NZ_CP014204.2 | Clostridium baratii |
| 58 | 14730 | 15002 | + | NZ_AP022847.1 | Nitrosophilus alvini |
| 59 | 1513327 | 1513587 | + | NZ_CP035504.1 | Kocuria indica |
| 60 | 2463673 | 2463936 | + | NC_014387.1 | Butyrivibrio proteoclasticus B316 |
| 61 | 797337 | 797609 | - | NZ_CP014991.1 | Helicobacter himalayensis |
| 62 | 2078795 | 2079058 | + | NZ_CP040058.1 | Anaerostipes rhamnosivorans |
| 63 | 1667289 | 1667549 | + | NZ_CP034412.1 | Glutamicibacter creatinolyticus |
| 64 | 75769 | 76038 | + | NC_017379.1 | Helicobacter pylori Puno135 |
| 65 | 1330132 | 1330401 | - | NC_008229.1 | Helicobacter acinonychis str. Sheeba |
| 66 | 2275195 | 2275467 | - | NZ_CP012196.1 | Campylobacter gracilis |
| 67 | 3382844 | 3383098 | + | NC_018025.1 | Desulfomonile tiedjei DSM 6799 |
| 68 | 3643894 | 3644178 | + | NC_011831.1 | Chloroflexus aggregans DSM 9485 |
| 69 | 2956820 | 2957086 | + | NZ_CP014176.1 | Clostridium argentinense |
| 70 | 1230053 | 1230313 | + | NZ_LR134375.1 | Veillonella dispar |
| 71 | 1274965 | 1275225 | + | NZ_LR778174.1 | Veillonella parvula |
| 72 | 875896 | 876156 | - | NZ_LT906470.1 | Veillonella rodentium |
| 73 | 664699 | 664974 | - | NC_014810.2 | Helicobacter felis ATCC 49179 |
| 74 | 1084458 | 1084730 | + | NZ_LN907858.1 | Helicobacter typhlonius |
| 75 | 1171942 | 1172202 | + | NZ_AP022321.1 | Veillonella nakazawae |
| 76 | 945424 | 945687 | - | NC_014376.1 | [Clostridium] saccharolyticum WM1 |
| 77 | 758353 | 758625 | - | NC_017735.1 | Helicobacter cetorum MIT 99-5656 |
| 78 | 358424 | 358687 | + | NZ_LT990039.1 | Massilistercora timonensis |
| 79 | 1640163 | 1640423 | - | NZ_CP039126.1 | Blautia producta |
| 80 | 3472917 | 3473180 | - | NZ_LR130778.1 | Petrocella atlantisensis |
| 81 | 1076005 | 1076265 | - | NZ_CP013745.1 | Arthrobacter alpinus |
| 82 | 1196327 | 1196590 | + | NZ_LT635479.1 | Lachnoclostridium phocaeense |
| 83 | 2245421 | 2245684 | - | NZ_CP022464.2 | Enterocloster bolteae |
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