Result : A9GR94
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 50S ribosomal protein L33 1 |
| NCBI Accession ID | AM746676.1 |
| Organism | Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain So ce56)) |
| Left | 582802 |
| Right | 582972 |
| Strand | + |
| Nucleotide Sequence | GTGGGCGAGCAGGCCGGTGGGTGGCGTGCGGCGCGCATCGCCGTCTCACTGGCCTGCCGCGAGTGCAAGTCGCGGAACTACAAGACCACGAAGGCGCCGGACCAGGTGGTGTCGCTCAAGAAGTTCTGCAAGCAGTGCAAGAAGCACACGGTTCACGACGAGACGAAGTGA |
| Sequence | MGEQAGGWRAARIAVSLACRECKSRNYKTTKAPDQVVSLKKFCKQCKKHTVHDETK |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl00383. Profile Description: Ribosomal protein L33. This model describes bacterial ribosomal protein L33 and its chloroplast and mitochondrial equivalents. [Protein synthesis, Ribosomal proteins: synthesis and modification] |
| Pubmed ID | 17965706 |
| Domain | CDD:412348 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | A9GR94 |
| ORF Length (Amino Acid) | 56 |
++ More..
| Conservation Analysis |
No. of Species: 241
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 582802 | 582972 | + | NC_010162.1 | Sorangium cellulosum So ce56 |
| 2 | 3431584 | 3431730 | + | NZ_CP008876.1 | Terribacillus goriensis |
| 3 | 182306 | 182455 | + | NC_019978.1 | Halobacteroides halobius DSM 5150 |
| 4 | 540326 | 540475 | + | NZ_CP046996.1 | Dehalobacter restrictus |
| 5 | 120580 | 120729 | + | NC_011899.1 | Halothermothrix orenii H 168 |
| 6 | 53596 | 53745 | - | NZ_CP036523.1 | Peptacetobacter hiranonis |
| 7 | 629809 | 629961 | - | NZ_CP012333.1 | Labilithrix luteola |
| 8 | 1385907 | 1386056 | + | NZ_CP059066.1 | Koleobacter methoxysyntrophicus |
| 9 | 1386083 | 1386232 | + | NC_010337.2 | Heliomicrobium modesticaldum Ice1 |
| 10 | 1533256 | 1533405 | - | NZ_LT906446.1 | Megamonas hypermegale |
| 11 | 2513119 | 2513268 | - | NZ_CP017237.1 | Moorella thermoacetica |
| 12 | 202030 | 202179 | + | NZ_CP061835.1 | Weissella viridescens |
| 13 | 3972609 | 3972758 | - | NZ_CP019870.1 | Clostridioides difficile |
| 14 | 4905968 | 4906117 | - | NZ_CP042430.1 | Baekduia soli |
| 15 | 312973 | 313116 | + | NC_013740.1 | Acidaminococcus fermentans DSM 20731 |
| 16 | 2918756 | 2918905 | + | NZ_CP045798.1 | Thermoanaerosceptrum fracticalcis |
| 17 | 1394477 | 1394641 | + | NC_013739.1 | Conexibacter woesei DSM 14684 |
| 18 | 825744 | 825893 | + | NC_009943.1 | Desulfococcus oleovorans Hxd3 |
| 19 | 65194 | 65343 | + | NZ_CP014150.1 | Paeniclostridium sordellii |
| 20 | 783037 | 783186 | + | NZ_CP030777.1 | Faecalibacterium prausnitzii |
| 21 | 286357 | 286506 | + | NZ_CP007032.1 | Desulfitobacterium metallireducens DSM 15288 |
| 22 | 2329863 | 2330012 | - | NC_014614.1 | Acetoanaerobium sticklandii |
| 23 | 1412753 | 1412902 | - | NZ_CP029256.1 | Christensenella minuta |
| 24 | 398649 | 398798 | + | NC_014964.1 | Thermoanaerobacter brockii subsp. finnii Ako-1 |
| 25 | 1980079 | 1980228 | - | NZ_CP009170.1 | Thermoanaerobacter kivui |
| 26 | 2030760 | 2030909 | - | NC_013921.1 | Thermoanaerobacter italicus Ab9 |
| 27 | 2310388 | 2310537 | - | NC_015958.1 | Thermoanaerobacter wiegelii Rt8.B1 |
| 28 | 2224201 | 2224350 | + | NZ_AP018449.1 | Methylomusa anaerophila |
| 29 | 4542731 | 4542880 | - | NC_010001.1 | Lachnoclostridium phytofermentans ISDg |
| 30 | 2701297 | 2701446 | - | NZ_CP014223.1 | Anaerotignum propionicum DSM 1682 |
| 31 | 2094795 | 2094932 | - | NZ_CP012395.1 | Clostridium autoethanogenum DSM 10061 |
| 32 | 4462025 | 4462162 | - | NC_014328.1 | Clostridium ljungdahlii DSM 13528 |
| 33 | 2623848 | 2623997 | - | NC_018870.1 | Thermacetogenium phaeum DSM 12270 |
| 34 | 337420 | 337569 | + | NC_015555.1 | Thermoanaerobacterium xylanolyticum LX-11 |
| 35 | 2843243 | 2843404 | - | NZ_CP048649.1 | Aminipila butyrica |
| 36 | 390141 | 390290 | + | NC_015172.1 | Syntrophobotulus glycolicus DSM 8271 |
| 37 | 3840488 | 3840637 | - | NZ_CP009687.1 | Clostridium aceticum |
| 38 | 2188463 | 2188612 | - | NC_020134.1 | Thermoclostridium stercorarium subsp. stercorarium DSM 8532 |
| 39 | 1308524 | 1308682 | + | NZ_CP007028.1 | Thermocrinis ruber |
| 40 | 1675146 | 1675295 | + | NZ_CP029462.1 | Megasphaera stantonii |
| 41 | 125626 | 125775 | + | NZ_CP007452.1 | Peptoclostridium acidaminophilum DSM 3953 |
| 42 | 1655917 | 1656057 | + | NZ_LT635475.1 | Ezakiella massiliensis |
| 43 | 996844 | 996993 | - | NZ_CP071376.1 | Clostridium gasigenes |
| 44 | 493704 | 493877 | + | NZ_CP020921.1 | Thermodesulfobium acidiphilum |
| 45 | 4081515 | 4081664 | - | NC_018645.1 | Desulfobacula toluolica Tol2 |
| 46 | 1059268 | 1059411 | + | NZ_CP034791.1 | Caldicellulosiruptor changbaiensis |
| 47 | 1907052 | 1907201 | - | NZ_CP065993.1 | Leuconostoc pseudomesenteroides |
| 48 | 2273475 | 2273624 | - | NZ_CP047602.1 | Thermoanaerobacterium aotearoense |
| 49 | 413590 | 413739 | + | NC_014410.1 | Thermoanaerobacterium thermosaccharolyticum DSM 571 |
| 50 | 1031679 | 1031828 | + | NZ_CP061800.1 | Desulfonema magnum |
| 51 | 1231796 | 1231939 | + | NC_014652.1 | Caldicellulosiruptor hydrothermalis 108 |
| 52 | 1350126 | 1350269 | + | NC_014720.1 | Caldicellulosiruptor kronotskyensis 2002 |
| 53 | 1621656 | 1621799 | - | NC_012034.1 | Caldicellulosiruptor bescii DSM 6725 |
| 54 | 542533 | 542682 | + | NC_009922.1 | Alkaliphilus oremlandii OhILAs |
| 55 | 537481 | 537654 | + | NC_015499.1 | Thermodesulfobium narugense DSM 14796 |
| 56 | 4200982 | 4201131 | - | NZ_CP020559.1 | Clostridium formicaceticum |
| 57 | 4577857 | 4578006 | - | NZ_CP015756.1 | Clostridium estertheticum subsp. estertheticum |
| 58 | 3554879 | 3555028 | - | NZ_CP030775.1 | Clostridium butyricum |
| 59 | 174445 | 174594 | + | NZ_CP043998.1 | Clostridium diolis |
| 60 | 109230 | 109376 | + | NZ_CP064875.1 | Bacillus toyonensis |
| 61 | 202534 | 202683 | + | NC_022571.1 | Clostridium saccharobutylicum DSM 13864 |
| 62 | 1481302 | 1481445 | - | NC_016630.1 | Filifactor alocis ATCC 35896 |
| 63 | 110092 | 110238 | + | NZ_CP024109.1 | Bacillus cytotoxicus |
| 64 | 2431684 | 2431833 | - | NZ_AP021875.1 | Desulfosarcina widdelii |
| 65 | 177470 | 177619 | + | NC_020291.1 | Clostridium saccharoperbutylacetonicum N1-4(HMT) |
| 66 | 6963317 | 6963466 | + | NZ_AP021876.1 | Desulfosarcina ovata subsp. sediminis |
| 67 | 1057684 | 1057833 | + | NZ_AP019004.1 | Phascolarctobacterium faecium |
| 68 | 2342340 | 2342483 | - | NC_009437.1 | Caldicellulosiruptor saccharolyticus DSM 8903 |
| 69 | 1251976 | 1252125 | + | NC_016894.1 | Acetobacterium woodii DSM 1030 |
| 70 | 3340096 | 3340245 | - | NC_014624.2 | Eubacterium callanderi |
| 71 | 4029781 | 4029930 | + | NZ_CP029487.1 | Eubacterium maltosivorans |
| 72 | 1843534 | 1843683 | + | NZ_CP019962.1 | Eubacterium limosum |
| 73 | 604064 | 604213 | - | NC_013894.1 | Thermocrinis albus DSM 14484 |
| 74 | 806664 | 806801 | - | NC_017161.1 | Hydrogenobacter thermophilus TK-6 |
| 75 | 631764 | 631913 | + | NZ_CP014176.1 | Clostridium argentinense |
| 76 | 235019 | 235156 | + | NZ_CP016786.1 | Clostridium isatidis |
| 77 | 528847 | 528996 | - | NZ_CP009240.1 | Megasphaera elsdenii 14-14 |
| 78 | 1640104 | 1640253 | - | NC_012438.1 | Sulfurihydrogenibium azorense Az-Fu1 |
| 79 | 971796 | 971945 | + | NZ_CP032364.1 | Lachnoanaerobaculum umeaense |
| 80 | 808477 | 808626 | + | NZ_CP031115.1 | Rubrobacter indicoceani |
| 81 | 2991642 | 2991791 | - | NC_008261.1 | Clostridium perfringens ATCC 13124 |
| 82 | 5010255 | 5010401 | - | NZ_CP040336.1 | Bacillus luti |
| 83 | 103778 | 103924 | + | NC_007530.2 | Bacillus anthracis str. 'Ames Ancestor' |
| 84 | 4518751 | 4518900 | - | NC_014393.1 | Clostridium cellulovorans 743B |
| 85 | 109139 | 109285 | + | NZ_CP032365.1 | Bacillus wiedmannii |
| 86 | 436440 | 436610 | + | NZ_CP022544.1 | Bifidobacterium pseudolongum |
| 87 | 1942269 | 1942436 | - | NZ_CP006712.1 | Bifidobacterium breve JCM 7017 |
| 88 | 2021301 | 2021468 | - | NZ_CP026999.1 | Bifidobacterium longum |
| 89 | 359502 | 359672 | + | NZ_AP012325.1 | Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043 |
| 90 | 406281 | 406451 | + | NZ_CP025199.1 | Bifidobacterium pseudocatenulatum |
| 91 | 391930 | 392100 | + | NZ_CP028341.1 | Bifidobacterium adolescentis |
| 92 | 502410 | 502580 | + | NZ_AP012326.1 | Bifidobacterium dentium JCM 1195 = DSM 20436 |
| 93 | 583287 | 583457 | + | NZ_AP012331.1 | Bifidobacterium scardovii JCM 12489 = DSM 13734 |
| 94 | 1358160 | 1358312 | + | NC_000918.1 | Aquifex aeolicus VF5 |
| 95 | 78312 | 78461 | - | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 96 | 5099146 | 5099295 | - | NZ_AP023367.1 | Anaerocolumna cellulosilytica |
| 97 | 894437 | 894586 | - | NZ_CP048000.1 | Anaerocolumna sedimenticola |
| 98 | 2184089 | 2184226 | - | NC_008148.1 | Rubrobacter xylanophilus DSM 9941 |
| 99 | 4594643 | 4594792 | - | NC_009633.1 | Alkaliphilus metalliredigens QYMF |
| 100 | 216054 | 216203 | + | NC_009253.1 | Desulfotomaculum reducens MI-1 |
| 101 | 1598435 | 1598584 | - | NC_015389.1 | Coriobacterium glomerans PW2 |
| 102 | 109421 | 109567 | + | NC_011725.1 | Bacillus cereus B4264 |
| 103 | 1378171 | 1378320 | + | NC_010814.1 | Geobacter lovleyi SZ |
| 104 | 354798 | 354965 | + | NZ_AP012322.1 | Bifidobacterium angulatum DSM 20098 = JCM 7096 |
| 105 | 4750816 | 4750980 | - | NC_013757.1 | Geodermatophilus obscurus DSM 43160 |
| 106 | 215829 | 215978 | + | NZ_LR699011.1 | Roseburia hominis |
| 107 | 586730 | 586888 | + | NZ_AP019551.1 | Athalassotoga saccharophila |
| 108 | 1800956 | 1801105 | - | NC_013939.1 | Deferribacter desulfuricans SSM1 |
| 109 | 287933 | 288076 | + | NC_015589.1 | Desulfotomaculum ruminis DSM 2154 |
| 110 | 2394223 | 2394372 | - | NZ_AP021874.1 | Desulfosarcina alkanivorans |
| 111 | 1474548 | 1474697 | - | NZ_AP013035.1 | Thermosulfidibacter takaii ABI70S6 |
| 112 | 69781 | 69930 | + | NZ_CP027228.1 | Mogibacterium diversum |
| 113 | 1426354 | 1426494 | - | NZ_CP009302.1 | Berryella intestinalis |
| 114 | 1115550 | 1115720 | + | NZ_CP018044.1 | Bifidobacterium choerinum |
| 115 | 2283383 | 2283532 | - | NZ_LT906477.1 | Clostridium cochlearium |
| 116 | 400364 | 400513 | + | NZ_CP047141.1 | Ligilactobacillus animalis |
| 117 | 353647 | 353796 | + | NC_011898.1 | Ruminiclostridium cellulolyticum H10 |
| 118 | 2507540 | 2507680 | - | NC_013204.1 | Eggerthella lenta DSM 2243 |
| 119 | 421510 | 421659 | + | NC_018017.1 | Desulfitobacterium dehalogenans ATCC 51507 |
| 120 | 445302 | 445451 | + | NC_011830.1 | Desulfitobacterium hafniense DCB-2 |
| 121 | 1876540 | 1876689 | - | NC_022567.1 | Adlercreutzia equolifaciens DSM 19450 |
| 122 | 2979659 | 2979808 | - | NZ_CP045875.1 | Heliorestis convoluta |
| 123 | 1160443 | 1160592 | + | NZ_LT635772.1 | Anaerococcus mediterraneensis |
| 124 | 70764 | 70913 | + | NZ_LT635455.1 | Olsenella timonensis |
| 125 | 2679510 | 2679659 | - | NZ_HG917868.1 | Clostridium bornimense |
| 126 | 1317436 | 1317585 | - | NC_013203.1 | Lancefieldella parvulum DSM 20469 |
| 127 | 207094 | 207234 | + | NZ_AP019367.1 | Parolsenella catena |
| 128 | 5769275 | 5769424 | - | NZ_CP022464.2 | Enterocloster bolteae |
| 129 | 2111951 | 2112100 | - | NC_014377.1 | Thermosediminibacter oceani DSM 16646 |
| 130 | 1630473 | 1630622 | - | NZ_LR134304.1 | Staphylococcus schweitzeri |
| 131 | 445156 | 445305 | + | NC_019903.1 | Desulfitobacterium dichloroeliminans LMG P-21439 |
| 132 | 3145653 | 3145802 | - | NC_002939.5 | Geobacter sulfurreducens PCA |
| 133 | 3975715 | 3975864 | - | NZ_CP011663.1 | Clostridium sporogenes |
| 134 | 4243541 | 4243690 | - | NZ_CP061336.1 | Ruminiclostridium herbifermentans |
| 135 | 221421 | 221570 | + | NC_016584.1 | Desulfosporosinus orientis DSM 765 |
| 136 | 4011697 | 4011846 | - | NZ_CP019659.1 | Paenibacillus larvae subsp. larvae |
| 137 | 5809032 | 5809181 | - | NZ_CP022753.1 | Nocardiopsis gilva YIM 90087 |
| 138 | 1698610 | 1698759 | - | NZ_LT906470.1 | Veillonella rodentium |
| 139 | 1695318 | 1695467 | - | NZ_LR134375.1 | Veillonella dispar |
| 140 | 1757056 | 1757205 | - | NZ_LR778174.1 | Veillonella parvula |
| 141 | 1640024 | 1640173 | - | NZ_AP022321.1 | Veillonella nakazawae |
| 142 | 1176475 | 1176618 | + | NZ_CP017703.1 | Aeribacillus pallidus |
| 143 | 1770290 | 1770427 | + | NZ_CP021434.1 | Tumebacillus avium |
| 144 | 1860557 | 1860706 | - | NC_014363.1 | Olsenella uli DSM 7084 |
| 145 | 2505609 | 2505779 | + | NZ_CP060713.1 | Nocardioides mesophilus |
| 146 | 873030 | 873179 | + | NC_015437.1 | Selenomonas sputigena ATCC 35185 |
| 147 | 1682789 | 1682929 | - | NZ_CP011402.1 | Denitrobacterium detoxificans |
| 148 | 318710 | 318880 | + | NZ_AP012334.1 | Scardovia inopinata JCM 12537 |
| 149 | 119822 | 119965 | + | NZ_CP042593.1 | Bacillus dafuensis |
| 150 | 1153863 | 1154012 | + | NZ_CP022121.1 | Dehalobacterium formicoaceticum |
| 151 | 450374 | 450523 | - | NZ_CP014022.1 | Staphylococcus lugdunensis |
| 152 | 2258745 | 2258915 | + | NZ_CP033719.1 | Propionibacterium acidifaciens |
| 153 | 709595 | 709765 | + | NZ_CP011502.1 | Aeromicrobium erythreum |
| 154 | 38606 | 38755 | + | NZ_CP036259.1 | Sporomusa termitida |
| 155 | 3023835 | 3023984 | + | NC_017310.1 | Desulfovibrio vulgaris RCH1 |
| 156 | 1676049 | 1676198 | - | NC_015388.1 | Desulfobacca acetoxidans DSM 11109 |
| 157 | 511237 | 511377 | + | NZ_LT821227.1 | Phoenicibacter congonensis |
| 158 | 1212724 | 1212891 | - | NZ_CP062938.1 | Bifidobacterium eulemuris |
| 159 | 1648695 | 1648862 | + | NZ_CP062948.1 | Bifidobacterium lemurum |
| 160 | 1163653 | 1163802 | - | NC_020127.1 | Lawsonia intracellularis N343 |
| 161 | 895475 | 895615 | + | NZ_LR134379.1 | Slackia heliotrinireducens |
| 162 | 2391403 | 2391540 | - | NC_018664.1 | Gottschalkia acidurici 9a |
| 163 | 864124 | 864273 | + | NC_014972.1 | Desulfobulbus propionicus DSM 2032 |
| 164 | 1124957 | 1125106 | + | NZ_CP053187.1 | Turicibacter sanguinis |
| 165 | 1531653 | 1531823 | - | NZ_AP012333.1 | Parascardovia denticolens DSM 10105 = JCM 12538 |
| 166 | 222665 | 222814 | + | NC_018515.1 | Desulfosporosinus meridiei DSM 13257 |
| 167 | 2538613 | 2538783 | - | NZ_CP044344.1 | Nocardioides cynanchi |
| 168 | 123464 | 123607 | + | NC_022524.1 | Bacillus infantis NRRL B-14911 |
| 169 | 2038376 | 2038525 | - | NZ_CP007514.1 | Rubrobacter radiotolerans |
| 170 | 1902230 | 1902379 | + | NC_008554.1 | Syntrophobacter fumaroxidans MPOB |
| 171 | 8264779 | 8264946 | + | NZ_AP022870.1 | Phytohabitans flavus |
| 172 | 4352056 | 4352223 | + | NZ_AP022871.1 | Phytohabitans suffuscus |
| 173 | 1843697 | 1843846 | - | NZ_CP035130.1 | Gudongella oleilytica |
| 174 | 6713468 | 6713638 | - | NC_013947.1 | Stackebrandtia nassauensis DSM 44728 |
| 175 | 1774320 | 1774463 | - | NZ_CP041305.1 | Cytobacillus ciccensis |
| 176 | 2211163 | 2211333 | - | NZ_LR134442.1 | Propionibacterium australiense |
| 177 | 308698 | 308865 | + | NC_008578.1 | Acidothermus cellulolyticus 11B |
| 178 | 250061 | 250210 | + | NZ_CP032416.1 | Clostridium fermenticellae |
| 179 | 926705 | 926875 | + | NZ_CP039291.1 | Cellulomonas shaoxiangyii |
| 180 | 1817345 | 1817515 | - | NZ_LR134477.1 | Actinomyces viscosus |
| 181 | 111031 | 111180 | + | NZ_CP024035.1 | Priestia aryabhattai |
| 182 | 403861 | 404031 | + | NZ_LT985188.1 | Micropruina glycogenica |
| 183 | 404041 | 404205 | + | NC_014165.1 | Thermobispora bispora DSM 43833 |
| 184 | 5970215 | 5970382 | - | NZ_AP023355.1 | Actinocatenispora thailandica |
| 185 | 3115536 | 3115706 | - | NZ_CP026952.1 | Aeromicrobium chenweiae |
| 186 | 2999736 | 2999906 | - | NC_014151.1 | Cellulomonas flavigena DSM 20109 |
| 187 | 6619109 | 6619276 | - | NZ_CP058322.1 | Micromonospora carbonacea |
| 188 | 323406 | 323576 | + | NZ_CP066060.1 | Actinomyces oris |
| 189 | 1479048 | 1479197 | + | NZ_CP070511.1 | Parageobacillus toebii |
| 190 | 989400 | 989549 | - | NZ_CP009761.1 | Parvimonas micra |
| 191 | 963845 | 964015 | - | NZ_CP066049.1 | Actinomyces naeslundii |
| 192 | 734177 | 734326 | - | NZ_CP009709.1 | Weizmannia coagulans DSM 1 = ATCC 7050 |
| 193 | 6204928 | 6205095 | - | NC_014391.1 | Micromonospora aurantiaca ATCC 27029 |
| 194 | 634213 | 634380 | + | NC_017093.1 | Actinoplanes missouriensis 431 |
| 195 | 510370 | 510528 | + | NZ_CP034234.1 | Erysipelothrix piscisicarius |
| 196 | 668565 | 668702 | - | NZ_CP048877.1 | Thermosulfuriphilus ammonigenes |
| 197 | 2089167 | 2089316 | - | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 198 | 1515747 | 1515896 | + | NZ_CP067016.1 | Anaerococcus obesiensis |
| 199 | 900826 | 900975 | + | NZ_CP066014.1 | Anaerococcus vaginalis |
| 200 | 123765 | 123914 | + | NC_004193.1 | Oceanobacillus iheyensis HTE831 |
| 201 | 1958185 | 1958334 | - | NZ_CP068564.1 | Keratinibaculum paraultunense |
| 202 | 153203 | 153355 | + | NZ_CP039457.1 | Streptococcus pasteurianus |
| 203 | 946210 | 946362 | + | NZ_CP054015.1 | Streptococcus gallolyticus |
| 204 | 415806 | 415955 | + | NZ_AP017378.1 | Desulfovibrio ferrophilus |
| 205 | 1509311 | 1509463 | - | NZ_CP039712.1 | Vagococcus zengguangii |
| 206 | 1071014 | 1071166 | - | NC_017096.1 | Caldisericum exile AZM16c01 |
| 207 | 558404 | 558553 | + | NZ_AP022613.1 | Mycobacterium conspicuum |
| 208 | 3073121 | 3073270 | - | NZ_AP022575.1 | Mycobacterium shinjukuense |
| 209 | 366897 | 367034 | - | NZ_CP060715.1 | Erysipelothrix inopinata |
| 210 | 120387 | 120530 | + | NZ_CP012024.1 | Bacillus smithii |
| 211 | 1063653 | 1063802 | + | NZ_CP035108.1 | Geovibrio thiophilus |
| 212 | 133127 | 133276 | + | NZ_CP041666.1 | Radiobacillus deserti |
| 213 | 162247 | 162417 | - | NC_015682.1 | Thermodesulfobacterium geofontis OPF15 |
| 214 | 1044287 | 1044451 | + | NC_013131.1 | Catenulispora acidiphila DSM 44928 |
| 215 | 370009 | 370158 | - | NZ_CP046314.1 | Gemella morbillorum |
| 216 | 1399590 | 1399739 | - | NZ_LR134484.1 | Gemella haemolysans |
| 217 | 1494288 | 1494437 | + | NZ_CP026538.1 | Desulfovibrio carbinolicus |
| 218 | 3537562 | 3537711 | - | NC_012796.1 | Desulfovibrio magneticus RS-1 |
| 219 | 3115072 | 3115221 | + | NZ_CP017704.1 | Peribacillus simplex NBRC 15720 = DSM 1321 |
| 220 | 1464071 | 1464220 | - | NZ_LN898144.1 | Paucilactobacillus oligofermentans DSM 15707 = LMG 22743 |
| 221 | 1422189 | 1422356 | - | NZ_CP006018.1 | Bifidobacterium indicum LMG 11587 = DSM 20214 |
| 222 | 1459326 | 1459493 | - | NZ_CP007287.1 | Bifidobacterium coryneforme |
| 223 | 241871 | 242020 | - | NZ_CP014230.1 | Desulfomicrobium orale DSM 12838 |
| 224 | 4032702 | 4032851 | - | NC_011979.1 | Geobacter daltonii FRC-32 |
| 225 | 3072041 | 3072190 | - | NZ_AP022587.1 | Mycobacterium stomatepiae |
| 226 | 119261 | 119410 | + | NC_013791.2 | Alkalihalobacillus pseudofirmus OF4 |
| 227 | 1673276 | 1673425 | - | NZ_CP015519.1 | Syntrophotalea acetylenivorans |
| 228 | 1584979 | 1585128 | - | NC_014758.1 | Calditerrivibrio nitroreducens DSM 19672 |
| 229 | 1691099 | 1691266 | + | NZ_CP011786.1 | Bifidobacterium actinocoloniiforme DSM 22766 |
| 230 | 1752401 | 1752568 | - | NC_018720.1 | Bifidobacterium asteroides PRL2011 |
| 231 | 5117570 | 5117719 | + | NZ_CP042806.1 | Terriglobus albidus |
| 232 | 2563046 | 2563189 | + | NZ_CP048436.1 | Flavonifractor plautii |
| 233 | 1872491 | 1872640 | - | NZ_CP030926.1 | Peribacillus butanolivorans |
| 234 | 3385520 | 3385657 | + | NC_012483.1 | Acidobacterium capsulatum ATCC 51196 |
| 235 | 2486120 | 2486269 | - | NZ_CP023704.1 | Caldibacillus thermoamylovorans |
| 236 | 4857910 | 4858077 | - | NZ_CP045309.1 | Micromonospora terminaliae |
| 237 | 4189636 | 4189803 | + | NZ_CP061725.1 | Micromonospora craniellae |
| 238 | 624825 | 624992 | + | NZ_CP023865.1 | Actinoplanes teichomyceticus ATCC 31121 |
| 239 | 478334 | 478471 | + | NC_015672.1 | Flexistipes sinusarabici DSM 4947 |
| 240 | 4166630 | 4166779 | - | NC_014963.1 | Terriglobus saanensis SP1PR4 |
| 241 | 2191504 | 2191653 | - | NC_003869.1 | Caldanaerobacter subterraneus subsp. tengcongensis MB4 |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_010162.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00584.22 | 0.79 | 190 | 50.5 | same-strand | SecE/Sec61-gamma subunits of protein translocation complex |
| 2 | PF02357.21 | 0.8 | 194 | 344.0 | same-strand | Transcription termination factor nusG |
| 3 | PF03946.16 | 0.77 | 186 | 964.0 | same-strand | Ribosomal protein L11, N-terminal domain |
| 4 | PF00298.21 | 0.77 | 186 | 964.0 | same-strand | Ribosomal protein L11, RNA binding domain |
| 5 | PF00687.23 | 0.74 | 179 | 1432 | same-strand | Ribosomal protein L1p/L10e family |
| 6 | PF00466.22 | 0.67 | 162 | 2325.5 | same-strand | Ribosomal protein L10 |
++ More..