Result : Q8R5X6
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 10 kDa chaperonin (GroES protein) (Protein Cpn10) |
| NCBI Accession ID | AE009951.2 |
| Organism | Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355) |
| Left | 1332198 |
| Right | 1332470 |
| Strand | - |
| Nucleotide Sequence | ATGAATATCAAACCTATTGGAGAAAGAGTTCTGTTAAAACCAATAAAAAAAGAAGAAAAGACTAAGAGTGGTATATTACTTAGCTCAAAATCATCTAATACAGATACACAAAATCAAGCGGAAGTTATTGCTTTGGGAAAAGGAGAAAAATTAGAAGGAATTAAAGTTGGAGATAAGGTTATTTTCAATAAGTTTTCTGGAAATGAAATAGAAGATGGGGATGTAAAATATTTGATAGTTAATGCAGAAGATATTTTAGCTATTATTGGATAA |
| Sequence | MNIKPIGERVLLKPIKKEEKTKSGILLSSKSSNTDTQNQAEVIALGKGEKLEGIKVGDKVIFNKFSGNEIEDGDVKYLIVNAEDILAIIG |
| Source of smORF | Swiss-Prot |
| Function | Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. {ECO:0000255|HAMAP-Rule:MF_00580}. |
| Pubmed ID | 11889109 |
| Domain | CDD:415587 |
| Functional Category | Others |
| Uniprot ID | Q8R5X6 |
| ORF Length (Amino Acid) | 90 |
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| Conservation Analysis |
No. of Species: 16
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1701050 | 1701322 | + | NZ_CP068114.1 | Fusobacterium canifelinum |
| 2 | 1462498 | 1462770 | - | NZ_CP013336.1 | Fusobacterium hwasookii ChDC F206 |
| 3 | 1589069 | 1589341 | + | NZ_LN831027.1 | Fusobacterium nucleatum subsp. polymorphum |
| 4 | 193802 | 194074 | - | NZ_CP024699.1 | Fusobacterium pseudoperiodonticum |
| 5 | 181993 | 182262 | - | NZ_CP028102.1 | Fusobacterium mortiferum ATCC 9817 |
| 6 | 128276 | 128545 | - | NZ_CP028105.1 | Fusobacterium ulcerans |
| 7 | 93544 | 93813 | - | NZ_CP028103.1 | Fusobacterium varium ATCC 27725 |
| 8 | 1026259 | 1026522 | + | NZ_AP019829.2 | Leptotrichia wadei |
| 9 | 1594880 | 1595143 | - | NZ_AP019845.1 | Leptotrichia trevisanii |
| 10 | 838468 | 838731 | + | NZ_AP019846.1 | Leptotrichia hongkongensis |
| 11 | 31827 | 32096 | - | NZ_AP014509.1 | Thermotoga caldifontis AZM44c09 |
| 12 | 838757 | 839020 | - | NZ_AP019827.1 | Leptotrichia shahii |
| 13 | 1752351 | 1752620 | - | NC_015707.1 | Pseudothermotoga thermarum DSM 5069 |
| 14 | 335935 | 336204 | - | NC_009828.1 | Pseudothermotoga lettingae TMO |
| 15 | 330419 | 330688 | - | NC_022792.1 | Pseudothermotoga elfii DSM 9442 = NBRC 107921 |
| 16 | 26125 | 26394 | - | NC_022795.1 | Pseudothermotoga hypogea DSM 11164 = NBRC 106472 |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP068114.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00118.26 | 1.0 | 16 | 17.5 | same-strand | TCP-1/cpn60 chaperonin family |
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