Result : Q8NMQ1
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | ATP-dependent Clp protease adapter protein ClpS |
| NCBI Accession ID | BA000036.3 |
| Organism | Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) |
| Left | 2662881 |
| Right | 2663183 |
| Strand | - |
| Nucleotide Sequence | ATGTCGTCACCTTCTGCACCGCTTGCCACGCCAGATGTTGAGCTTGATGTGCACACGTTGTCGAGCGAAAACCTGCCTTGGTTGTGCATCGTGTGGGATGATCCGGTCAATTTGATGAGCTATGTCACCTACGTTTTTCAGACTGTGTTGGGCTTCAGTAAGAAGAGGGCCACTGAGCTGATGATGCAGGTGCACACCGAAGGTAAAGCCGTGGTGAGTTCTGGCGAGAAGGACAAAGTGGAGGGTGATGTGAAGAAACTCCACACCGCAGGGCTGTGGGCGACAATGCAGCAGGCAGGGTAG |
| Sequence | MSSPSAPLATPDVELDVHTLSSENLPWLCIVWDDPVNLMSYVTYVFQTVLGFSKKRATELMMQVHTEGKAVVSSGEKDKVEGDVKKLHTAGLWATMQQAG |
| Source of smORF | Swiss-Prot |
| Function | Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation. {ECO:0000255|HAMAP-Rule:MF_00302}. |
| Pubmed ID | 12743753 12948626 |
| Domain | CDD:412656 |
| Functional Category | Others |
| Uniprot ID | Q8NMQ1 |
| ORF Length (Amino Acid) | 100 |
++ More..
| Conservation Analysis |
No. of Species: 233
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 2828937 | 2829239 | - | NZ_AP017369.1 | Corynebacterium suranareeae |
| 2 | 2356498 | 2356800 | - | NZ_CP009220.1 | Corynebacterium deserti GIMN1.010 |
| 3 | 2425139 | 2425441 | - | NZ_CP015622.1 | Corynebacterium crudilactis |
| 4 | 2277594 | 2277848 | - | NC_020506.1 | Corynebacterium callunae DSM 20147 |
| 5 | 2562956 | 2563216 | - | NC_004369.1 | Corynebacterium efficiens YS-314 |
| 6 | 1884218 | 1884466 | - | NZ_CP011546.1 | Corynebacterium uterequi |
| 7 | 2121149 | 2121457 | - | NZ_CP011541.1 | Corynebacterium epidermidicanis |
| 8 | 43030 | 43332 | + | NZ_CP069485.1 | Corynebacterium glucuronolyticum |
| 9 | 2039947 | 2040234 | - | NZ_CP026947.1 | Corynebacterium yudongzhengii |
| 10 | 1262145 | 1262393 | + | NZ_CP038157.1 | Corynebacterium sanguinis |
| 11 | 917999 | 918247 | - | NZ_LT906443.1 | Corynebacterium ulcerans |
| 12 | 1813126 | 1813374 | - | NZ_CP009215.1 | Corynebacterium ureicelerivorans |
| 13 | 1863530 | 1863778 | - | NZ_LN831026.1 | Corynebacterium diphtheriae |
| 14 | 2321973 | 2322272 | - | NC_021915.1 | Corynebacterium maris DSM 45190 |
| 15 | 2137979 | 2138293 | - | NZ_CP007790.1 | Corynebacterium marinum DSM 44953 |
| 16 | 2219615 | 2219923 | - | NZ_CP033896.1 | Corynebacterium choanae |
| 17 | 1820451 | 1820699 | - | NC_017301.2 | Corynebacterium pseudotuberculosis C231 |
| 18 | 2093422 | 2093709 | - | NZ_LT906467.1 | Corynebacterium imitans |
| 19 | 329613 | 329885 | + | NZ_LT906473.1 | Corynebacterium cystitidis |
| 20 | 2071647 | 2071946 | - | NZ_CP019688.1 | Corynebacterium glaucum |
| 21 | 1898617 | 1898865 | - | NZ_LR738855.1 | Corynebacterium rouxii |
| 22 | 2217592 | 2217897 | - | NZ_CP011545.1 | Corynebacterium testudinoris |
| 23 | 2171030 | 2171302 | - | NZ_CP009247.1 | Corynebacterium frankenforstense DSM 45800 |
| 24 | 1764862 | 1765149 | + | NZ_CP068161.1 | Corynebacterium propinquum |
| 25 | 526907 | 527194 | + | NZ_CP035299.1 | Corynebacterium pelargi |
| 26 | 492913 | 493200 | + | NZ_CP033898.1 | Corynebacterium pseudopelargi |
| 27 | 2350767 | 2351027 | - | NZ_CP004353.1 | Corynebacterium vitaeruminis DSM 20294 |
| 28 | 2070523 | 2070828 | - | NZ_LS483459.1 | Corynebacterium jeikeium |
| 29 | 2768735 | 2768983 | - | NZ_CP011542.1 | Corynebacterium mustelae |
| 30 | 639760 | 640008 | + | NZ_CP067012.1 | Corynebacterium kefirresidentii |
| 31 | 1861763 | 1862005 | - | NZ_CP026948.1 | Corynebacterium liangguodongii |
| 32 | 2193109 | 2193357 | - | NZ_CP006764.1 | Corynebacterium doosanense CAU 212 = DSM 45436 |
| 33 | 1809079 | 1809339 | - | NZ_CP033897.1 | Corynebacterium gerontici |
| 34 | 1028178 | 1028483 | - | NZ_LT906481.1 | Corynebacterium urealyticum |
| 35 | 2550313 | 2550600 | - | NC_020302.1 | Corynebacterium halotolerans YIM 70093 = DSM 44683 |
| 36 | 1952495 | 1952782 | - | NZ_CP011311.1 | Corynebacterium camporealensis |
| 37 | 2290476 | 2290763 | - | NC_012590.1 | Corynebacterium aurimucosum ATCC 700975 |
| 38 | 2284461 | 2284748 | - | NZ_CP010827.1 | Corynebacterium singulare |
| 39 | 524814 | 525086 | + | NZ_LS483460.1 | Corynebacterium minutissimum |
| 40 | 2182244 | 2182531 | - | NZ_CP009246.1 | Corynebacterium flavescens |
| 41 | 648551 | 648838 | + | NZ_CP011312.1 | Corynebacterium kutscheri |
| 42 | 517711 | 518016 | + | NC_015673.1 | Corynebacterium resistens DSM 45100 |
| 43 | 2002710 | 2002997 | - | NZ_CP039247.1 | Corynebacterium endometrii |
| 44 | 2293072 | 2293359 | - | NZ_LR698967.1 | Corynebacterium ammoniagenes |
| 45 | 758315 | 758620 | + | NC_021663.1 | Corynebacterium terpenotabidum Y-11 |
| 46 | 2291112 | 2291399 | - | NZ_CP009251.1 | Corynebacterium stationis |
| 47 | 2039702 | 2039989 | + | NZ_CP014635.1 | Corynebacterium simulans |
| 48 | 346088 | 346375 | - | NZ_LS483464.1 | Corynebacterium renale |
| 49 | 1346132 | 1346437 | - | NZ_CP042429.1 | Corynebacterium nuruki S6-4 |
| 50 | 629291 | 629551 | + | NZ_CP009249.1 | Corynebacterium phocae |
| 51 | 1867920 | 1868207 | - | NZ_CP008944.1 | Corynebacterium atypicum |
| 52 | 1673124 | 1673423 | - | NC_012704.1 | Corynebacterium kroppenstedtii DSM 44385 |
| 53 | 589175 | 589480 | + | NZ_CP046883.1 | Corynebacterium anserum |
| 54 | 2313735 | 2313989 | - | NZ_CP009245.1 | Corynebacterium aquilae DSM 44791 |
| 55 | 2661584 | 2661856 | - | NZ_CP006842.1 | Corynebacterium glyciniphilum AJ 3170 |
| 56 | 1374154 | 1374399 | - | NZ_CP032788.1 | Corynebacterium xerosis |
| 57 | 636524 | 636817 | + | NZ_CP009248.1 | Corynebacterium sphenisci DSM 44792 |
| 58 | 4004258 | 4004569 | - | NZ_AP023172.1 | Rhodococcus qingshengii |
| 59 | 5659041 | 5659346 | - | NZ_CP018082.1 | Nocardia mangyaensis |
| 60 | 730634 | 730894 | + | NZ_CP006841.1 | Corynebacterium lactis RW2-5 |
| 61 | 2368373 | 2368618 | + | NZ_CP068168.1 | Corynebacterium amycolatum |
| 62 | 2120455 | 2120760 | + | NZ_LR134352.1 | Nocardia asteroides |
| 63 | 1514847 | 1515143 | + | NC_014168.1 | Segniliparus rotundus DSM 44985 |
| 64 | 6561693 | 6561992 | - | NZ_AP023396.1 | Nocardia wallacei |
| 65 | 2110207 | 2110509 | + | NZ_CP027793.1 | Rhodococcus hoagii |
| 66 | 1204982 | 1205245 | + | NC_006361.1 | Nocardia farcinica IFM 10152 |
| 67 | 301754 | 302017 | - | NZ_CP026746.1 | Nocardia cyriacigeorgica |
| 68 | 1562902 | 1563195 | + | NZ_AP017900.1 | Nocardia seriolae |
| 69 | 1819372 | 1819674 | - | NZ_AP022569.1 | Mycobacterium cookii |
| 70 | 5076483 | 5076728 | - | NZ_CP022088.2 | Nocardia brasiliensis |
| 71 | 2109699 | 2110007 | + | NC_016906.1 | Gordonia polyisoprenivorans VH2 |
| 72 | 1226540 | 1226821 | + | NZ_CP048813.1 | Rhodococcus triatomae |
| 73 | 4805877 | 4806122 | + | NZ_AP022577.1 | Mycolicibacterium aubagnense |
| 74 | 2363793 | 2364038 | - | NZ_AP022616.1 | Mycolicibacterium phocaicum |
| 75 | 7748849 | 7749151 | + | NZ_CP015163.1 | Amycolatopsis albispora |
| 76 | 1327862 | 1328161 | + | NZ_CP022521.1 | Actinoalloteichus hoggarensis |
| 77 | 1378532 | 1378831 | + | NZ_CP016076.1 | Actinoalloteichus fjordicus |
| 78 | 1138187 | 1138480 | + | NZ_CP015453.1 | Dietzia psychralcaliphila |
| 79 | 1116050 | 1116352 | + | NZ_AP022612.1 | Mycolicibacterium confluentis |
| 80 | 1413688 | 1413933 | + | NZ_CP062008.1 | Mycolicibacterium mucogenicum DSM 44124 |
| 81 | 1195822 | 1196115 | + | NZ_CP015449.1 | Dietzia lutea |
| 82 | 4218451 | 4218753 | - | NZ_AP022610.1 | Mycolicibacterium madagascariense |
| 83 | 4272709 | 4272969 | - | NZ_CP011491.1 | Mycolicibacterium vaccae 95051 |
| 84 | 3886453 | 3886755 | + | NZ_AP022599.1 | Mycolicibacterium pulveris |
| 85 | 5009161 | 5009463 | - | NZ_LN831039.1 | Mycolicibacterium smegmatis |
| 86 | 3377335 | 3377637 | + | NZ_CP012150.1 | Mycobacterium goodii |
| 87 | 5618927 | 5619229 | + | NZ_AP022608.1 | Mycolicibacterium gadium |
| 88 | 1754112 | 1754414 | + | NZ_AP024310.1 | Mycobacterium heckeshornense |
| 89 | 2755234 | 2755536 | - | NZ_AP022601.1 | Mycobacterium gallinarum |
| 90 | 2833888 | 2834190 | - | NZ_LR026975.1 | Mycolicibacterium hassiacum DSM 44199 |
| 91 | 4741311 | 4741604 | + | NZ_CP061007.1 | Saccharopolyspora spinosa |
| 92 | 3327128 | 3327430 | - | NZ_LT906483.1 | Mycolicibacterium thermoresistibile |
| 93 | 1324094 | 1324387 | + | NC_009142.1 | Saccharopolyspora erythraea NRRL 2338 |
| 94 | 2264682 | 2264984 | + | NZ_AP022560.1 | Mycolicibacterium moriokaense |
| 95 | 1204182 | 1204481 | - | NZ_CP016793.1 | Lentzea guizhouensis |
| 96 | 612555 | 612860 | + | NZ_AP022575.1 | Mycobacterium shinjukuense |
| 97 | 4008959 | 4009264 | - | NZ_AP022561.1 | Mycolicibacterium aichiense |
| 98 | 7294852 | 7295160 | - | NC_021252.1 | Amycolatopsis keratiniphila |
| 99 | 1289783 | 1290091 | + | NZ_CP008953.1 | Amycolatopsis japonica |
| 100 | 1653172 | 1653480 | + | NZ_CP016174.1 | Amycolatopsis orientalis |
| 101 | 2545156 | 2545410 | + | NZ_AP022574.1 | Mycolicibacterium psychrotolerans |
| 102 | 5208553 | 5208855 | - | NZ_CP043474.1 | Mycobacterium grossiae |
| 103 | 868152 | 868436 | + | NZ_AP022609.1 | Mycolicibacter hiberniae |
| 104 | 1237649 | 1237942 | - | NZ_LS483468.1 | Rhodococcus coprophilus |
| 105 | 4600906 | 4601160 | - | NC_008726.1 | Mycolicibacterium vanbaalenii PYR-1 |
| 106 | 4607288 | 4607587 | - | NZ_AP022570.1 | Mycolicibacterium poriferae |
| 107 | 2984097 | 2984402 | + | NZ_AP022595.1 | Mycolicibacterium sarraceniae |
| 108 | 3056239 | 3056541 | + | NZ_AP022606.1 | Mycobacterium branderi |
| 109 | 3193801 | 3194103 | + | NZ_AP022579.1 | Mycolicibacterium boenickei |
| 110 | 400659 | 400961 | - | NZ_AP022583.1 | Mycobacterium noviomagense |
| 111 | 2805906 | 2806202 | - | NZ_AP022590.1 | Mycobacterium mantenii |
| 112 | 5306121 | 5306414 | - | NZ_CP031142.1 | Saccharopolyspora pogona |
| 113 | 2355970 | 2356275 | - | NZ_AP022620.1 | Mycolicibacterium anyangense |
| 114 | 1667058 | 1667354 | + | NC_016946.1 | Mycobacterium intracellulare ATCC 13950 |
| 115 | 1421863 | 1422159 | + | NC_016948.1 | Mycobacterium paraintracellulare |
| 116 | 1268502 | 1268801 | + | NZ_CP034550.1 | Saccharothrix syringae |
| 117 | 661984 | 662289 | - | NZ_AP022596.1 | Mycolicibacterium helvum |
| 118 | 3539307 | 3539624 | + | NZ_AP022615.1 | Mycobacterium heidelbergense |
| 119 | 1413018 | 1413326 | + | NZ_CP009360.4 | Mycobacterium avium subsp. hominissuis |
| 120 | 3136960 | 3137244 | + | NZ_AP022589.1 | Mycolicibacter minnesotensis |
| 121 | 5185719 | 5186009 | - | NZ_CP022753.1 | Nocardiopsis gilva YIM 90087 |
| 122 | 1341034 | 1341318 | + | NZ_LT906469.1 | Mycolicibacter terrae |
| 123 | 1357934 | 1358236 | + | NZ_LR134355.1 | Mycolicibacterium chitae |
| 124 | 3818136 | 3818432 | - | NZ_AP022618.1 | Mycolicibacterium insubricum |
| 125 | 2087698 | 2088000 | + | NZ_CP020809.1 | Mycobacterium dioxanotrophicus |
| 126 | 2973686 | 2973970 | - | NZ_CP011883.2 | Mycobacterium haemophilum DSM 44634 |
| 127 | 3589568 | 3589873 | - | NZ_CP022685.1 | Streptomyces formicae |
| 128 | 6309497 | 6309802 | + | NZ_CP023699.1 | Streptomyces kanamyceticus |
| 129 | 1225640 | 1225939 | + | NC_019673.1 | Saccharothrix espanaensis DSM 44229 |
| 130 | 3124095 | 3124394 | + | NZ_AP022598.1 | Mycolicibacterium parafortuitum |
| 131 | 5521195 | 5521479 | - | NZ_CP016353.1 | Prauserella marina |
| 132 | 4295850 | 4296149 | - | NZ_LR134356.1 | Mycolicibacterium aurum |
| 133 | 2647006 | 2647302 | - | NZ_AP022582.1 | Mycobacterium seoulense |
| 134 | 2532474 | 2532770 | - | NZ_AP022619.1 | Mycobacterium paraseoulense |
| 135 | 1397752 | 1398048 | + | NZ_CP023147.1 | Mycobacterium marseillense |
| 136 | 8512760 | 8513059 | - | NC_022116.1 | Amycolatopsis mediterranei RB |
| 137 | 1428627 | 1428929 | + | NZ_AP018165.1 | [Mycobacterium] stephanolepidis |
| 138 | 1456207 | 1456509 | + | NZ_CP007220.1 | Mycobacteroides chelonae CCUG 47445 |
| 139 | 1341127 | 1341429 | + | NZ_CP024633.1 | Mycobacteroides salmoniphilum |
| 140 | 367821 | 368129 | - | NZ_CP053564.1 | Pseudonocardia broussonetiae |
| 141 | 1328711 | 1329013 | + | NZ_CP010271.1 | Mycobacteroides saopaulense |
| 142 | 1472217 | 1472519 | + | NZ_CP014955.1 | Mycobacteroides abscessus |
| 143 | 1601698 | 1602000 | + | NZ_CP011530.1 | Mycobacteroides immunogenum |
| 144 | 1212476 | 1212745 | + | NZ_CP015961.1 | Dietzia timorensis |
| 145 | 52793 | 53089 | + | NZ_AP022603.1 | Mycolicibacterium fallax |
| 146 | 456579 | 456836 | + | NZ_AP022586.1 | Mycolicibacterium litorale |
| 147 | 3045147 | 3045434 | - | NC_012669.1 | Beutenbergia cavernae DSM 12333 |
| 148 | 1580920 | 1581183 | + | NC_015312.1 | Pseudonocardia dioxanivorans CB1190 |
| 149 | 1036626 | 1036910 | + | NZ_CP023865.1 | Actinoplanes teichomyceticus ATCC 31121 |
| 150 | 1841533 | 1841802 | + | NC_013595.1 | Streptosporangium roseum DSM 43021 |
| 151 | 3530020 | 3530325 | - | NZ_CP029642.1 | Arthrobacter dokdonellae |
| 152 | 1006669 | 1006959 | + | NC_017093.1 | Actinoplanes missouriensis 431 |
| 153 | 2408153 | 2408449 | + | NZ_CP015079.1 | Nocardioides dokdonensis FR1436 |
| 154 | 1837817 | 1838110 | + | NZ_CP045572.1 | Nonomuraea nitratireducens |
| 155 | 1469236 | 1469529 | + | NC_014151.1 | Cellulomonas flavigena DSM 20109 |
| 156 | 1659434 | 1659724 | + | NZ_CP058322.1 | Micromonospora carbonacea |
| 157 | 1245271 | 1245561 | + | NC_009380.1 | Salinispora tropica CNB-440 |
| 158 | 2972408 | 2972713 | - | NZ_CP023695.1 | Streptomyces alboniger |
| 159 | 1901242 | 1901508 | - | NC_008578.1 | Acidothermus cellulolyticus 11B |
| 160 | 2791569 | 2791862 | - | NC_013521.1 | Sanguibacter keddieii DSM 10542 |
| 161 | 3679958 | 3680266 | - | NZ_CP023694.1 | Streptomyces coeruleorubidus |
| 162 | 5852687 | 5852995 | + | NZ_CP032427.1 | Streptomyces griseorubiginosus |
| 163 | 2555030 | 2555320 | - | NZ_AP022871.1 | Phytohabitans suffuscus |
| 164 | 443478 | 443786 | + | NZ_LT985188.1 | Micropruina glycogenica |
| 165 | 2760688 | 2760957 | + | NZ_CP028130.1 | Rathayibacter iranicus |
| 166 | 1173712 | 1174002 | + | NC_014391.1 | Micromonospora aurantiaca ATCC 27029 |
| 167 | 4318457 | 4318765 | + | NZ_CP022744.1 | Streptomyces lincolnensis |
| 168 | 2725968 | 2726258 | - | NZ_CP015866.1 | Streptomyces parvulus |
| 169 | 13239 | 13529 | + | NZ_CP045309.1 | Micromonospora terminaliae |
| 170 | 2695655 | 2695912 | - | NZ_CP028129.1 | Rathayibacter rathayi |
| 171 | 6267288 | 6267596 | + | NC_003155.5 | Streptomyces avermitilis MA-4680 = NBRC 14893 |
| 172 | 5734363 | 5734611 | + | NZ_CP045643.1 | Streptomyces fagopyri |
| 173 | 2783484 | 2783741 | - | NZ_CP029043.1 | Streptomyces nigra |
| 174 | 4327003 | 4327311 | - | NZ_CP034463.1 | Streptomyces aquilus |
| 175 | 3413021 | 3413329 | - | NZ_CP021978.1 | Streptomyces hawaiiensis |
| 176 | 6590741 | 6590983 | - | NZ_AP022870.1 | Phytohabitans flavus |
| 177 | 3434790 | 3435086 | - | NZ_CP059164.1 | Nocardioides ungokensis |
| 178 | 4673712 | 4674023 | - | NZ_CP018863.1 | Arthrobacter crystallopoietes |
| 179 | 3116932 | 3117222 | - | NZ_CP012382.1 | Streptomyces ambofaciens ATCC 23877 |
| 180 | 1400119 | 1400427 | + | NZ_CP063373.1 | Streptomyces ferrugineus |
| 181 | 102636 | 102923 | + | NZ_CP047180.1 | Rathayibacter festucae |
| 182 | 5528254 | 5528562 | + | NZ_CP030073.1 | Streptomyces cadmiisoli |
| 183 | 3147245 | 3147553 | - | NZ_CP063374.1 | Streptomyces chromofuscus |
| 184 | 1137349 | 1137669 | + | NC_013530.1 | Xylanimonas cellulosilytica DSM 15894 |
| 185 | 3075974 | 3076264 | - | NZ_CP010849.1 | Streptomyces cyaneogriseus subsp. noncyanogenus |
| 186 | 5120927 | 5121217 | + | NZ_LN831790.1 | Streptomyces leeuwenhoekii |
| 187 | 5939363 | 5939671 | + | NZ_AP023440.1 | Streptomyces glomeroaurantiacus |
| 188 | 4840919 | 4841227 | + | NZ_CP022310.1 | Streptomyces calvus |
| 189 | 3518495 | 3518803 | - | NZ_CP071839.1 | Streptomyces cyanogenus |
| 190 | 3531425 | 3531715 | + | NZ_CP045851.1 | Actinomarinicola tropica |
| 191 | 128182 | 128436 | + | NZ_CP047186.1 | Rathayibacter tanaceti |
| 192 | 6045875 | 6046183 | + | NZ_CP017248.1 | Streptomyces fodineus |
| 193 | 75365 | 75658 | + | NZ_CP044344.1 | Nocardioides cynanchi |
| 194 | 2784675 | 2784983 | - | NZ_AP023439.1 | Streptomyces tuirus |
| 195 | 3489139 | 3489447 | - | NZ_CP015098.1 | Streptomyces qaidamensis |
| 196 | 5386299 | 5386607 | + | NZ_CP034687.1 | Streptomyces griseoviridis |
| 197 | 1389258 | 1389542 | + | NC_022657.1 | Actinoplanes friuliensis DSM 7358 |
| 198 | 3927682 | 3927990 | - | NZ_CP047020.1 | Streptomyces broussonetiae |
| 199 | 6111145 | 6111432 | + | NZ_CP043661.1 | Kribbella qitaiheensis |
| 200 | 2417241 | 2417546 | - | NZ_CP013745.1 | Arthrobacter alpinus |
| 201 | 3052529 | 3052837 | - | NZ_CP023703.1 | Streptomyces galilaeus |
| 202 | 1678920 | 1679213 | - | NZ_LT593929.1 | Propionibacterium freudenreichii |
| 203 | 176964 | 177254 | + | NZ_CP015515.1 | Rathayibacter tritici |
| 204 | 2262870 | 2263175 | - | NZ_CP017316.1 | Streptomyces rubrolavendulae |
| 205 | 2406901 | 2407206 | - | NZ_CP023696.1 | Streptomyces fradiae ATCC 10745 = DSM 40063 |
| 206 | 5384651 | 5384959 | + | NZ_CP051006.1 | Streptomyces griseofuscus |
| 207 | 2366101 | 2366343 | - | NZ_CP041091.1 | Nocardioides sambongensis |
| 208 | 1601814 | 1602089 | + | NC_008278.1 | Frankia alni ACN14a |
| 209 | 2944920 | 2945210 | - | NZ_CP023407.1 | Streptomyces fungicidicus |
| 210 | 3512652 | 3512960 | - | NC_021985.1 | Streptomyces collinus Tu 365 |
| 211 | 4087739 | 4087987 | - | NZ_CP070326.1 | Streptomyces noursei |
| 212 | 1315231 | 1315479 | - | NZ_CP014209.1 | Isoptericola dokdonensis DS-3 |
| 213 | 9707850 | 9708158 | - | NZ_CP016279.1 | Streptomyces griseochromogenes |
| 214 | 4420036 | 4420311 | - | NC_013510.1 | Thermomonospora curvata DSM 43183 |
| 215 | 7207069 | 7207359 | - | NC_014666.1 | Frankia inefficax |
| 216 | 211300 | 211560 | + | NZ_CP035495.1 | Xylanimonas allomyrinae |
| 217 | 1535115 | 1535423 | + | NZ_CP022295.1 | Nocardioides aromaticivorans |
| 218 | 1657834 | 1658142 | + | NZ_CP009896.1 | Pimelobacter simplex |
| 219 | 1861435 | 1861680 | + | NC_013235.1 | Nakamurella multipartita DSM 44233 |
| 220 | 8023712 | 8023999 | + | NC_016582.1 | Streptomyces bingchenggensis BCW-1 |
| 221 | 2382482 | 2382796 | + | NZ_CP011112.1 | Luteipulveratus mongoliensis |
| 222 | 532833 | 533081 | - | NZ_CP022316.1 | Brachybacterium avium |
| 223 | 5092873 | 5093121 | + | NZ_CP048882.1 | Streptomyces bathyalis |
| 224 | 198714 | 199004 | + | NC_013124.1 | Acidimicrobium ferrooxidans DSM 10331 |
| 225 | 149717 | 149992 | + | NZ_CP042260.1 | Glutamicibacter halophytocola |
| 226 | 3548576 | 3548869 | + | NZ_CP038267.1 | Nocardioides euryhalodurans |
| 227 | 1436300 | 1436575 | + | NC_014550.1 | Glutamicibacter arilaitensis Re117 |
| 228 | 5353388 | 5353693 | + | NZ_CP032698.1 | Streptomyces hundungensis |
| 229 | 2934885 | 2935190 | - | NZ_CP023693.1 | Streptomyces cinereoruber |
| 230 | 4308295 | 4308537 | + | NC_020520.1 | Ilumatobacter coccineus YM16-304 |
| 231 | 5988318 | 5988623 | - | NZ_CP030862.1 | Streptomyces globosus |
| 232 | 2444627 | 2444911 | - | NC_015671.1 | Cellulomonas gilvus ATCC 13127 |
| 233 | 2238839 | 2239144 | + | NZ_CP036250.1 | Egicoccus halophilus |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_AP017369.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF09438.12 | 0.93 | 217 | 13 | same-strand | Domain of unknown function (DUF2017) |
| 2 | PF17767.3 | 0.94 | 220 | 118.5 | opposite-strand | Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain |
++ More..