Result : Q8G767
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (Asp/Glu-ADT subunit C) (EC 6.3.5.-) |
| NCBI Accession ID | |
| Organism | Bifidobacterium longum (strain NCC 2705) |
| Left | |
| Right | |
| Strand | |
| Nucleotide Sequence | |
| Sequence | MPTFSREEIVHLGDLARIALTDEEITRLQGELNVIADSINKVQEVASDDVPPTANPVPLEAYLRPDVAETPLTQEEALAGGPKTEAGMFVAPRILGSEE |
| Source of smORF | Swiss-Prot |
| Function | Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln). {ECO:0000255|HAMAP-Rule:MF_00122}. |
| Pubmed ID | 12381787 |
| Domain | CDD:412411 |
| Functional Category | Others |
| Uniprot ID | Q8G767 |
| ORF Length (Amino Acid) | 99 |
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| Conservation Analysis |
No. of Species: 49
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 289542 | 289841 | + | NZ_CP026999.1 | Bifidobacterium longum |
| 2 | 323415 | 323714 | + | NZ_CP006712.1 | Bifidobacterium breve JCM 7017 |
| 3 | 364319 | 364618 | + | NZ_AP012331.1 | Bifidobacterium scardovii JCM 12489 = DSM 13734 |
| 4 | 1504842 | 1505138 | + | NZ_CP062948.1 | Bifidobacterium lemurum |
| 5 | 122126 | 122425 | + | NZ_AP012322.1 | Bifidobacterium angulatum DSM 20098 = JCM 7096 |
| 6 | 1381215 | 1381511 | - | NZ_CP062938.1 | Bifidobacterium eulemuris |
| 7 | 1825329 | 1825625 | - | NZ_AP012325.1 | Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043 |
| 8 | 2257273 | 2257569 | - | NZ_AP012326.1 | Bifidobacterium dentium JCM 1195 = DSM 20436 |
| 9 | 1913877 | 1914173 | - | NZ_CP025199.1 | Bifidobacterium pseudocatenulatum |
| 10 | 1935055 | 1935351 | - | NZ_CP028341.1 | Bifidobacterium adolescentis |
| 11 | 4670 | 4966 | + | NZ_CP011786.1 | Bifidobacterium actinocoloniiforme DSM 22766 |
| 12 | 1927161 | 1927457 | - | NC_018720.1 | Bifidobacterium asteroides PRL2011 |
| 13 | 1553256 | 1553552 | - | NZ_CP006018.1 | Bifidobacterium indicum LMG 11587 = DSM 20214 |
| 14 | 1590583 | 1590879 | - | NZ_CP007287.1 | Bifidobacterium coryneforme |
| 15 | 405782 | 406078 | - | NZ_CP018044.1 | Bifidobacterium choerinum |
| 16 | 1757422 | 1757718 | - | NZ_CP022544.1 | Bifidobacterium pseudolongum |
| 17 | 441383 | 441676 | + | NZ_AP012334.1 | Scardovia inopinata JCM 12537 |
| 18 | 1261629 | 1261922 | - | NZ_AP012333.1 | Parascardovia denticolens DSM 10105 = JCM 12538 |
| 19 | 2111053 | 2111349 | + | NZ_CP023563.1 | Brachybacterium vulturis |
| 20 | 1626361 | 1626657 | + | NZ_CP023564.1 | Brachybacterium ginsengisoli |
| 21 | 406659 | 406955 | - | NZ_CP022316.1 | Brachybacterium avium |
| 22 | 1872638 | 1872937 | + | NZ_CP016174.1 | Amycolatopsis orientalis |
| 23 | 8407161 | 8407460 | - | NZ_CP007155.1 | Kutzneria albida DSM 43870 |
| 24 | 1515649 | 1515945 | - | NZ_CP031356.1 | Brachybacterium saurashtrense |
| 25 | 1793407 | 1793706 | + | NC_022116.1 | Amycolatopsis mediterranei RB |
| 26 | 7039732 | 7040031 | - | NC_021252.1 | Amycolatopsis keratiniphila |
| 27 | 1482044 | 1482340 | - | NZ_CP012117.1 | Dermabacter vaginalis |
| 28 | 1635361 | 1635660 | + | NZ_CP008953.1 | Amycolatopsis japonica |
| 29 | 72871 | 73176 | + | NZ_CP035810.1 | Brevibacterium luteolum |
| 30 | 4339808 | 4340104 | - | NZ_CP015163.1 | Amycolatopsis albispora |
| 31 | 7734509 | 7734808 | - | NC_017093.1 | Actinoplanes missouriensis 431 |
| 32 | 2997842 | 2998144 | + | NZ_CP053564.1 | Pseudonocardia broussonetiae |
| 33 | 916967 | 917209 | - | NC_009664.2 | Kineococcus radiotolerans SRS30216 = ATCC BAA-149 |
| 34 | 5663635 | 5663958 | - | NZ_AP018920.1 | Pseudonocardia autotrophica |
| 35 | 985278 | 985574 | + | NZ_CP051884.1 | Cellulomonas taurus |
| 36 | 3053701 | 3054000 | - | NZ_CP017146.1 | Marisediminicola antarctica |
| 37 | 997474 | 997773 | + | NZ_CP071883.1 | Curtobacterium flaccumfaciens pv. flaccumfaciens |
| 38 | 3381350 | 3381646 | - | NZ_CP041694.1 | Cellulosimicrobium cellulans |
| 39 | 2655862 | 2656158 | - | NC_014830.1 | Intrasporangium calvum DSM 43043 |
| 40 | 441526 | 441801 | + | NZ_CP041091.1 | Nocardioides sambongensis |
| 41 | 2687250 | 2687546 | - | NZ_CP045529.1 | Luteimicrobium xylanilyticum |
| 42 | 1845528 | 1845827 | - | NZ_CP026949.1 | Mycetocola zhujimingii |
| 43 | 1369568 | 1369843 | + | NZ_CP035037.1 | Leucobacter muris |
| 44 | 1295875 | 1296135 | + | NZ_CP038256.1 | Microbacterium sediminis |
| 45 | 398294 | 398569 | - | NZ_CP035806.1 | Leucobacter triazinivorans |
| 46 | 1466413 | 1466673 | + | NZ_CP044231.1 | Microbacterium caowuchunii |
| 47 | 1720074 | 1720349 | - | NZ_CP031423.1 | Microbacterium lemovicicum |
| 48 | 2289028 | 2289303 | - | NZ_CP049934.1 | Leucobacter insecticola |
| 49 | 129028 | 129303 | + | NZ_CP060716.1 | Leucobacter denitrificans |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP026999.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01425.23 | 1.0 | 49 | 2 | same-strand | Amidase |
| 2 | PF02934.17 | 1.0 | 49 | 1539 | same-strand | GatB/GatE catalytic domain |
| 3 | PF02637.20 | 1.0 | 49 | 1539 | same-strand | GatB domain |
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