* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF05166.15
|
1.0
|
2
|
1476
|
opposite-strand
|
YcgL domain
|
2
|
PF01557.20
|
1.0
|
2
|
745
|
opposite-strand
|
Fumarylacetoacetate (FAA) hydrolase family
|
3
|
PF03692.17
|
1.0
|
2
|
207
|
opposite-strand
|
Putative zinc- or iron-chelating domain
|
4
|
PF00717.25
|
1.0
|
2
|
1003
|
opposite-strand
|
Peptidase S24-like
|
5
|
PF00817.22
|
1.0
|
2
|
1422
|
opposite-strand
|
impB/mucB/samB family
|
6
|
PF13438.8
|
1.0
|
2
|
1422
|
opposite-strand
|
Domain of unknown function (DUF4113)
|
7
|
PF11799.10
|
1.0
|
2
|
1422
|
opposite-strand
|
impB/mucB/samB family C-terminal domain
|
8
|
PF11798.10
|
1.0
|
2
|
1422
|
opposite-strand
|
IMS family HHH motif
|
9
|
PF02600.18
|
1.0
|
2
|
2736
|
same-strand
|
Disulfide bond formation protein DsbB
|
10
|
PF06450.14
|
1.0
|
2
|
3412
|
same-strand
|
Bacterial Na+/H+ antiporter B (NhaB)
|
++ More..