Result : Q8EUW1
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Nucleoid-associated protein MYPE8070 |
| NCBI Accession ID | BA000026.2 |
| Organism | Mycoplasma penetrans (strain HF-2) |
| Left | 1084442 |
| Right | 1084726 |
| Strand | - |
| Nucleotide Sequence | ATGAATATGCAAAAAATGTTGCAACAAGCAAAAGCTTTACAAAGCAAAATGGAAAAGAAGATAAAAGAGTTTGAACAAGAAGAGTTTGAATTTGTTTATCAAAAATCTATTACTATTCAAATTAAAGGAAATTATGAAATTATCAAAATGGATATTAATAAAGAATTAATAGATCCTGAAGATAAAACGATGTTAGAGGAAATGATTTCAGAAGCTATTAATGAAGCAATTTCTGCAATTACTGAAGAAAAAGAAAAGATTACTAAAGGTGCAATGCCATTTTAA |
| Sequence | MNMQKMLQQAKALQSKMEKKIKEFEQEEFEFVYQKSITIQIKGNYEIIKMDINKELIDPEDKTMLEEMISEAINEAISAITEEKEKITKGAMPF |
| Source of smORF | Swiss-Prot |
| Function | Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. {ECO:0000255|HAMAP-Rule:MF_00274}. |
| Pubmed ID | 12466555 |
| Domain | CDD:412410 |
| Functional Category | DNA-binding |
| Uniprot ID | Q8EUW1 |
| ORF Length (Amino Acid) | 94 |
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| Conservation Analysis |
No. of Species: 2
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1084442 | 1084726 | - | NC_004432.1 | Mycoplasma penetrans HF-2 |
| 2 | 869427 | 869720 | - | NZ_LR215023.1 | Mycoplasma iowae |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_004432.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF02132.17 | 1.0 | 2 | 3.0 | same-strand | RecR protein |
| 2 | PF13662.8 | 1.0 | 2 | 3.0 | same-strand | Toprim domain |
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