* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP065993.1
| Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
|
1
|
PF00072.26
|
0.75
|
3
|
2181
|
same-strand
|
Response regulator receiver domain
|
|
2
|
PF02518.28
|
0.75
|
3
|
598
|
same-strand
|
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
|
|
3
|
PF00588.21
|
0.75
|
3
|
1039
|
opposite-strand
|
SpoU rRNA Methylase family
|
|
4
|
PF08032.14
|
0.75
|
3
|
1039
|
opposite-strand
|
RNA 2'-O ribose methyltransferase substrate binding
|
++ More..