ProsmORF-pred
Result : Q8D3B8
Protein Information
Information Type Description
Protein name 50S ribosomal protein L35
NCBI Accession ID BA000021.3
Organism Wigglesworthia glossinidia brevipalpis
Left 88380
Right 88580
Strand +
Nucleotide Sequence GTGTTAAAAATAAAGAATATTCGTAGCGTGTGCAAAAGATTTAAAAAAACGGCTTCATGTAATAAATTTAAATATAAAAAATCAAATCTGAGGCATATTTTAACAAAAAAATCTACTAAACGTAAAAGAAAATTAAGAATAAAATCTTTTGCAACAAAAGGTGATAAAAAACTAATATTAAGATGTTTACCATACAAATAA
Sequence MLKIKNIRSVCKRFKKTASCNKFKYKKSNLRHILTKKSTKRKRKLRIKSFATKGDKKLILRCLPYK
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl00392. Profile Description: Ribosomal protein L35. This ribosomal protein is found in bacteria and organelles only. It is not closely related to any eukaryotic or archaeal ribosomal protein. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Pubmed ID 12219091
Domain CDD:412354
Functional Category Ribosomal_protein
Uniprot ID Q8D3B8
ORF Length (Amino Acid) 66
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 420
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 90328 90525 + NC_016893.1 Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)
2 2381381 2381578 - NZ_CP006569.1 Sodalis praecaptivus
3 1806920 1807117 + NZ_CP015581.1 Tatumella citrea
4 3121427 3121624 - NC_005126.1 Photorhabdus laumondii subsp. laumondii TTO1
5 2230736 2230933 + NZ_CP038498.1 Pectobacterium punjabense
6 3823926 3824123 + NZ_CP047495.1 Pectobacterium brasiliense
7 2556888 2557085 - NZ_CP051652.1 Pectobacterium carotovorum
8 2651297 2651494 - NZ_CP034938.1 Pectobacterium odoriferum
9 1040739 1040936 + NZ_CP017482.1 Pectobacterium polaris
10 1786854 1787051 + NZ_LN907827.1 Erwinia gerundensis
11 1716111 1716308 + NC_013961.1 Erwinia amylovora CFBP1430
12 2088455 2088652 - NC_010694.1 Erwinia tasmaniensis Et1/99
13 1813429 1813626 + NZ_CP023567.1 Erwinia pyrifoliae
14 2298830 2299027 - NZ_CP045720.1 Pantoea eucalypti
15 2293662 2293859 - NZ_CP038853.1 Pantoea vagans
16 1952834 1953031 - NZ_CP060401.1 Xenorhabdus nematophila
17 2132079 2132276 + NC_014306.1 Erwinia billingiae Eb661
18 1498468 1498665 + NZ_FO704551.1 Xenorhabdus poinarii G6
19 1764824 1765021 + NZ_FO704550.1 Xenorhabdus doucetiae
20 1967411 1967608 + NZ_CP072455.1 Xenorhabdus budapestensis
21 2693417 2693614 - NZ_LR134201.1 Cedecea lapagei
22 2098806 2099003 + NC_012962.1 Photorhabdus asymbiotica
23 4171566 4171763 + NZ_CP011104.1 Photorhabdus thracensis
24 2510637 2510834 - NZ_CP025799.1 Dickeya zeae
25 1443413 1443610 - NZ_CP016176.1 Xenorhabdus hominickii
26 1761848 1762045 + NZ_CP034148.1 Pantoea agglomerans
27 2515112 2515309 - NC_013892.1 Xenorhabdus bovienii SS-2004
28 1637740 1637937 + NZ_CP029185.2 Limnobaculum parvum
29 1717203 1717400 + NZ_LR134531.1 Pragia fontium
30 1648330 1648527 + NZ_CP034752.1 Jinshanibacter zhutongyuii
31 1761080 1761277 + NZ_LS483470.1 Leminorella richardii
32 2599346 2599543 - NZ_LS483422.1 Providencia heimbachae
33 2631981 2632178 - NZ_AP023184.1 Buttiauxella agrestis
34 2347425 2347622 + NZ_CP009125.1 Pectobacterium atrosepticum
35 1732862 1733059 - NZ_CP015749.1 Pectobacterium parmentieri
36 4020613 4020810 + NZ_CP015750.1 Pectobacterium wasabiae CFBP 3304
37 561810 562007 - NZ_CP040863.1 Rodentibacter heylii
38 2171394 2171591 + NZ_CP050150.1 Hafnia alvei
39 3118852 3119049 + NZ_CP026364.1 Proteus hauseri
40 1601618 1601815 + NZ_CP047349.1 Proteus terrae subsp. cibarius
41 3410189 3410386 - NZ_CP023536.1 Providencia alcalifaciens
42 2679315 2679512 - NZ_CP048796.1 Providencia vermicola
43 2491329 2491526 + NZ_CP029736.1 Providencia rettgeri
44 1065422 1065619 + NZ_CP031123.2 Providencia huaxiensis
45 2298327 2298524 + NZ_CP065044.1 Pectobacterium aroidearum
46 2930817 2931014 - NZ_CP023525.1 Cedecea neteri
47 3852904 3853101 - NZ_CP019706.1 Pantoea alhagi
48 2019843 2020040 + NZ_CP061511.1 Mixta calida
49 2070909 2071106 + NZ_CP026377.1 Mixta gaviniae
50 1212126 1212323 + NZ_CP028271.1 Mixta intestinalis
51 3623271 3623468 - NZ_CP023706.1 Edwardsiella tarda
52 1947087 1947284 - NZ_CP016043.1 Edwardsiella hoshinae
53 1818250 1818447 + NC_012779.2 Edwardsiella ictaluri 93-146
54 3870959 3871156 - NZ_CP006664.1 Edwardsiella anguillarum ET080813
55 791092 791289 - NC_021883.1 Mannheimia haemolytica USMARC_2286
56 1913067 1913264 - NZ_CP014137.1 Brenneria goodwinii
57 2616436 2616633 - NC_017554.1 Pantoea ananatis PA13
58 145462 145659 + NZ_CP049115.1 Pantoea stewartii
59 2025506 2025703 + NZ_CP042220.2 Dickeya poaceiphila
60 787146 787343 + NZ_CP023529.1 Lelliottia amnigena
61 2502899 2503096 - NZ_LT615367.1 Dickeya aquatica
62 2100531 2100728 + NZ_CP045845.1 Kluyvera intermedia
63 2235725 2235922 + NC_012912.1 Dickeya chrysanthemi Ech1591
64 171681 171878 + NZ_CP009460.1 Dickeya fangzhongdai
65 3480462 3480659 + NZ_CP040428.1 Jejubacter calystegiae
66 2593297 2593494 - NC_014500.1 Dickeya dadantii 3937
67 1100842 1101039 + NC_010554.1 Proteus mirabilis HI4320
68 1545941 1546138 - NZ_CP027107.1 Cronobacter sakazakii
69 2330588 2330785 - NZ_CP013940.1 Cronobacter malonaticus LMG 23826
70 1834396 1834593 + NZ_CP012257.1 Cronobacter universalis NCTC 9529
71 1840924 1841121 + NZ_CP012264.1 Cronobacter condimenti 1330
72 2167938 2168135 - NZ_CP012268.1 Cronobacter muytjensii ATCC 51329
73 1955157 1955354 + NZ_CP061527.1 Shigella dysenteriae
74 1866760 1866957 + NZ_CP012266.1 Cronobacter dublinensis subsp. dublinensis LMG 23823
75 2029538 2029735 + NZ_LR134340.1 Escherichia marmotae
76 4388366 4388563 + NZ_AP019007.1 Enterobacter oligotrophicus
77 3826610 3826807 + NZ_CP053416.1 Salmonella bongori
78 335778 335975 + NZ_CP057657.1 Escherichia fergusonii
79 1547009 1547206 + NC_004337.2 Shigella flexneri 2a str. 301
80 1799802 1799999 - NC_000913.3 Escherichia coli str. K-12 substr. MG1655
81 1734189 1734386 - NZ_AP014857.1 Escherichia albertii
82 2647682 2647879 - NZ_CP035129.1 Kosakonia cowanii
83 2544718 2544915 - NZ_CP012871.1 [Enterobacter] lignolyticus
84 1925322 1925519 + NZ_CP027986.1 Enterobacter sichuanensis
85 1666433 1666630 - NC_009792.1 Citrobacter koseri ATCC BAA-895
86 1860535 1860732 + NZ_CP017184.1 Enterobacter roggenkampii
87 2790649 2790846 - NZ_CP013990.1 Leclercia adecarboxylata
88 633653 633850 - NZ_CP025034.2 Enterobacter sp. SGAir0187
89 1920363 1920560 + NZ_CP009756.1 Enterobacter cloacae
90 1414763 1414960 + NC_003197.2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
91 1023817 1024014 - NZ_CP016337.1 Kosakonia sacchari
92 2101706 2101903 + NZ_CP063425.1 Kosakonia pseudosacchari
93 975196 975393 - NZ_CP045300.1 Kosakonia arachidis
94 2141685 2141882 + NZ_CP043318.1 Enterobacter chengduensis
95 3049591 3049788 - NZ_LR134475.1 Klebsiella aerogenes
96 2077196 2077393 + NZ_CP065838.1 Klebsiella quasipneumoniae
97 2190916 2191113 + NZ_CP041247.1 Raoultella electrica
98 3160025 3160222 - NC_016845.1 Klebsiella pneumoniae subsp. pneumoniae HS11286
99 1434507 1434704 + NC_013716.1 Citrobacter rodentium ICC168
100 3915125 3915322 - NZ_CP020388.1 Pluralibacter gergoviae
101 3126125 3126322 - NZ_CP014007.2 Kosakonia oryzae
102 2686332 2686529 + NZ_CP051548.1 Phytobacter diazotrophicus
103 4998492 4998689 - NZ_CP026047.1 Raoultella planticola
104 2399652 2399849 - NC_002695.2 Escherichia coli O157:H7 str. Sakai
105 1423745 1423942 + NZ_CP011602.1 Phytobacter ursingii
106 2129050 2129247 + NZ_CP054254.1 Klebsiella variicola
107 2271115 2271312 + NZ_CP046672.1 Raoultella ornithinolytica
108 2278704 2278901 + NZ_CP050508.1 Raoultella terrigena
109 2058348 2058545 + NZ_CP015113.1 Kosakonia radicincitans
110 2438850 2439047 + NZ_CP060111.1 Klebsiella michiganensis
111 2491027 2491224 + NZ_CP036175.1 Klebsiella huaxiensis
112 2519523 2519720 - NZ_CP031560.1 Dickeya dianthicola
113 1492024 1492221 - NZ_CP009610.1 Haemophilus influenzae
114 1436945 1437142 + NZ_LS483458.1 Haemophilus haemolyticus
115 1578548 1578745 - NZ_LS483429.1 Haemophilus aegyptius
116 1892060 1892257 + NZ_AP022508.1 Enterobacter bugandensis
117 1886755 1886952 + NC_015968.1 Enterobacter soli
118 670145 670342 + NZ_CP038469.1 Citrobacter tructae
119 1130254 1130451 + NZ_CP017279.1 Enterobacter ludwigii
120 1579816 1580013 - NZ_CP045769.1 Enterobacter cancerogenus
121 252765 252962 - NZ_CP044098.1 Citrobacter portucalensis
122 4817536 4817733 + NZ_CP033744.1 Citrobacter freundii
123 3572120 3572317 + NZ_LT556085.1 Citrobacter amalonaticus
124 3427488 3427685 - NZ_CP045205.1 Citrobacter telavivensis
125 1610375 1610572 + NZ_LT906463.1 Haemophilus pittmaniae
126 1234001 1234198 + NZ_CP015425.1 [Haemophilus] ducreyi
127 1366941 1367138 - NZ_CP016604.1 Otariodibacter oris
128 1202708 1202905 - NZ_CP016605.1 Bisgaardia hudsonensis
129 774113 774310 - NZ_CP006944.1 Mannheimia varigena USDA-ARS-USMARC-1312
130 1981910 1982107 - NZ_CP015029.1 Frederiksenia canicola
131 1820891 1821088 + NZ_CP046531.1 Mannheimia ovis
132 1888492 1888689 + NZ_CP055305.1 Mannheimia pernigra
133 1773058 1773255 - NZ_LR134167.1 Avibacterium volantium
134 1424416 1424613 - NZ_CP029206.1 Actinobacillus porcitonsillarum
135 1898176 1898373 - NC_011852.1 Glaesserella parasuis SH0165
136 2110077 2110274 - NZ_CP028926.1 Pasteurella multocida
137 758241 758438 + NZ_LT906448.1 Pasteurella dagmatis
138 250078 250275 + NZ_CP030753.1 Actinobacillus pleuropneumoniae
139 660395 660592 + NZ_CP006954.1 Bibersteinia trehalosi USDA-ARS-USMARC-188
140 2030785 2030982 - NZ_CP034035.1 Brenneria rubrifaciens
141 476234 476431 + NZ_CP016180.1 Pasteurella skyensis
142 2507604 2507801 - NZ_CP034036.1 Brenneria nigrifluens DSM 30175 = ATCC 13028
143 1958933 1959130 + NZ_CP061280.1 Mannheimia bovis
144 2430534 2430731 - NC_012880.1 Musicola paradisiaca Ech703
145 679141 679338 + NZ_CP015031.1 Basfia succiniciproducens
146 1038996 1039193 + NC_006300.1 [Mannheimia] succiniciproducens MBEL55E
147 4762785 4762982 - NZ_CP015137.1 Dickeya solani IPO 2222
148 1959148 1959345 + NZ_CP054058.1 Scandinavium goeteborgense
149 3652858 3653055 + NZ_CP042941.1 Atlantibacter hermannii
150 3193609 3193806 - NZ_CP023009.1 Lonsdalea britannica
151 378480 378677 + NZ_CP007715.1 Actinobacillus equuli subsp. equuli
152 368780 368977 + NZ_CP009159.1 Actinobacillus suis ATCC 33415
153 1125851 1126048 + NZ_CP018804.1 Histophilus somni
154 1951290 1951487 - NZ_CP065534.1 Lonsdalea populi
155 1648178 1648375 + NC_017910.1 Shimwellia blattae DSM 4481 = NBRC 105725
156 1552298 1552495 + NZ_LR134327.1 Aggregatibacter aphrophilus ATCC 33389
157 1832313 1832510 - NZ_LR134510.1 Actinobacillus delphinicola
158 1372751 1372948 + NZ_LS483443.1 Aggregatibacter segnis ATCC 33393
159 249418 249615 + NZ_CP009781.1 Yersinia aldovae 670-83
160 2335260 2335457 + NZ_LR134494.1 Serratia quinivorans
161 2241662 2241859 + NC_015567.1 Serratia plymuthica AS9
162 571393 571590 - NZ_CP011078.1 Yersinia ruckeri
163 1900691 1900888 + NZ_LR134373.1 Yersinia pseudotuberculosis
164 1644862 1645059 + NZ_CP032487.1 Yersinia hibernica
165 4341193 4341390 - NZ_CP007230.1 Yersinia similis
166 4496166 4496363 + NZ_CP011254.1 Serratia fonticola
167 833179 833376 - NZ_CP009787.1 Yersinia rohdei
168 3310990 3311187 + NZ_CP054043.1 Yersinia mollaretii ATCC 43969
169 2137100 2137297 + NZ_CP043727.1 Yersinia canariae
170 2519676 2519873 - NZ_CP011118.1 Yersinia enterocolitica
171 2467199 2467396 - NZ_CP046293.1 Yersinia intermedia
172 1813170 1813367 - NZ_CP067057.1 Rahnella aceris
173 3613254 3613451 + NZ_CP065640.1 Serratia rubidaea
174 2828448 2828645 - NZ_CP071320.1 Serratia ureilytica
175 1582807 1583004 + NZ_CP016948.1 Serratia surfactantfaciens
176 2319903 2320100 + NZ_LT906479.1 Serratia ficaria
177 2280306 2280503 + NZ_CP038662.1 Serratia nematodiphila
178 2261665 2261862 + NZ_CP048784.1 Serratia liquefaciens
179 3850293 3850490 - NZ_CP007044.2 Chania multitudinisentens RB-25
180 1550362 1550559 + NZ_CP007445.1 Gilliamella apicola
181 5159206 5159403 + NZ_CP014136.1 Gibbsiella quercinecans
182 855914 856111 + NZ_CP009056.1 Frischella perrara
183 1500123 1500320 - NC_006512.1 Idiomarina loihiensis L2TR
184 3652404 3652601 - NZ_CP041660.1 Catenovulum sediminis
185 1759472 1759669 + NZ_CP008849.1 Alteromonas australica
186 2086139 2086336 - NZ_CP031416.1 Gallaecimonas mangrovi
187 2545384 2545578 - NZ_CP046378.1 Shewanella algae
188 2545120 2545317 - NZ_CP036536.1 Salinimonas lutimaris
189 1620260 1620457 + NZ_CP046670.1 Alteromonas mediterranea
190 1751115 1751312 - NZ_CP014322.1 Alteromonas addita
191 2393658 2393855 - NC_015554.1 Alteromonas naphthalenivorans
192 2634467 2634661 - NC_014012.1 Shewanella violacea DSS12
193 1194725 1194919 - NZ_CP014782.1 Shewanella psychrophila
194 2066115 2066312 + NC_014541.1 Ferrimonas balearica DSM 9799
195 2696532 2696726 - NC_016901.1 Shewanella baltica OS678
196 1445894 1446091 + NZ_CP029347.1 Saliniradius amylolyticus
197 1633065 1633262 + NZ_CP031769.1 Salinimonas sediminis
198 2032125 2032319 + NZ_CP069213.1 Shewanella litorisediminis
199 2162135 2162329 + NC_008700.1 Shewanella amazonensis SB2B
200 1667869 1668063 + NZ_CP020373.1 Shewanella khirikhana
201 1435461 1435658 + NZ_CP040449.1 Aeromonas simiae
202 2246421 2246615 + NZ_CP041036.1 Shewanella polaris
203 2009519 2009713 + NC_007954.1 Shewanella denitrificans OS217
204 2398917 2399111 - NC_008345.1 Shewanella frigidimarina NCIMB 400
205 2218471 2218665 - NZ_CP037951.1 Parashewanella tropica
206 3036751 3036945 - NC_010506.1 Shewanella woodyi ATCC 51908
207 1785426 1785620 + NZ_CP061941.1 Marinomonas algicola
208 2668614 2668808 + NZ_CP034015.1 Shewanella livingstonensis
209 1586765 1586959 + NC_015559.1 Marinomonas posidonica IVIA-Po-181
210 3741402 3741596 + NZ_CP070273.1 Marinomonas foliarum
211 1347770 1347967 + NZ_CP051180.1 Ferrimonas lipolytica
212 2391291 2391485 - NZ_CP022358.1 Shewanella bicestrii
213 1685301 1685495 + NZ_CP054301.1 Marinomonas primoryensis
214 287271 287468 - NZ_CP052766.1 Alteromonas pelagimontana
215 2652459 2652653 + NZ_CP037952.1 Parashewanella spongiae
216 2588716 2588910 + NC_011566.1 Shewanella piezotolerans WP3
217 2570237 2570431 + NC_009831.1 Shewanella sediminis HAW-EB3
218 1840783 1840980 + NC_016041.1 Glaciecola nitratireducens FR1064
219 818860 819057 + NZ_CP010975.1 Kangiella geojedonensis
220 2330922 2331119 + NZ_CP050851.1 Aeromonas hydrophila
221 4633753 4633947 + NZ_CP036200.1 Shewanella maritima
222 763173 763367 - NZ_CP041783.1 Shewanella donghaensis
223 2429089 2429283 + NZ_CP020472.1 Shewanella japonica
224 2740031 2740225 - NC_009901.1 Shewanella pealeana ATCC 700345
225 2439942 2440136 + NC_010334.1 Shewanella halifaxensis HAW-EB4
226 2699665 2699862 - NC_008709.1 Psychromonas ingrahamii 37
227 831538 831735 + NZ_CP012418.1 Kangiella sediminilitoris
228 1717855 1718052 - NZ_CP025120.1 Kangiella profundi
229 1858802 1858999 - NC_013166.1 Kangiella koreensis DSM 16069
230 1412388 1412585 - NZ_CP029556.1 Lysobacter oculi
231 2343689 2343883 - NC_009092.1 Shewanella loihica PV-4
232 1891385 1891582 - NZ_CP035033.1 Hydrogenovibrio thermophilus
233 2105283 2105477 + NZ_CP022272.1 Shewanella marisflavi
234 1924375 1924575 - NZ_CP013187.1 Pseudoalteromonas phenolica
235 666565 666762 + NZ_AP020335.1 Hydrogenovibrio marinus
236 1614035 1614232 - NC_015581.1 Thiomicrospira cyclica ALM1
237 1826224 1826421 - NZ_CP007030.1 Thiomicrospira aerophila AL3
238 870465 870662 + NZ_CP044060.1 Aeromonas veronii
239 1068971 1069168 + NZ_CP065745.1 Aeromonas allosaccharophila
240 2945035 2945229 - NZ_AP014545.1 Amphritea japonica ATCC BAA-1530
241 1031490 1031684 - NZ_LS483250.1 Moritella yayanosii
242 1712500 1712697 + NZ_AP014936.1 Sulfurifustis variabilis
243 3843727 3843921 - NZ_CP015839.1 Marinobacterium aestuarii
244 1323394 1323594 - NZ_CP031961.1 Pseudoalteromonas tunicata
245 905030 905227 + NZ_CP054020.1 Thiomicrorhabdus xiamenensis
246 631681 631878 + NZ_AP018722.1 Thiomicrorhabdus aquaedulcis
247 2766033 2766227 - NC_015276.1 Marinomonas mediterranea MMB-1
248 1392982 1393182 + NZ_CP011039.1 Pseudoalteromonas spongiae UST010723-006
249 2174335 2174535 + NZ_CP009888.1 Pseudoalteromonas piratica
250 2499272 2499469 - NZ_CP028897.1 Dongshaea marina
251 3516212 3516412 - NZ_CP072425.1 Pseudoalteromonas viridis
252 2545483 2545677 - NZ_CP061081.1 Marinomonas arctica
253 1022241 1022438 + NZ_CP033040.1 Thiomicrorhabdus indica
254 1382568 1382762 + NZ_CP044399.1 Moritella marina ATCC 15381
255 892994 893191 + NZ_AP021888.1 Thiosulfativibrio zosterae
256 2493986 2494180 - NZ_CP043869.1 Neptunomonas concharum
257 1580280 1580477 + NZ_CP017415.1 Acidihalobacter yilgarnenesis
258 1965537 1965734 - NZ_AP021889.1 Thiosulfatimonas sediminis
259 1466418 1466618 + NC_007481.1 Pseudoalteromonas translucida
260 1620039 1620239 + NZ_CP011041.1 Pseudoalteromonas tetraodonis
261 1563869 1564069 + NZ_CP011030.1 Pseudoalteromonas issachenkonii
262 1646669 1646869 + NZ_CP011036.1 Pseudoalteromonas nigrifaciens
263 1653052 1653252 + NZ_CP033065.1 Pseudoalteromonas agarivorans
264 1998299 1998499 - NZ_CP023464.1 Pseudoalteromonas atlantica
265 1736371 1736571 + NZ_CP011028.1 Pseudoalteromonas espejiana DSM 9414
266 2760517 2760711 + NZ_CP042382.1 Pistricoccus aurantiacus
267 3256889 3257083 + NZ_CP007142.1 Gynuella sunshinyii YC6258
268 2393867 2394061 - NZ_CP013106.1 Halomonas huangheensis
269 1925893 1926093 - NZ_CP032090.1 Pseudoalteromonas donghaensis
270 1586613 1586807 + NZ_CP040991.1 Vibrio furnissii
271 986322 986516 - NZ_CP014034.2 Vibrio fluvialis
272 3503942 3504136 + NZ_CP059082.1 Halomonas titanicae
273 1155425 1155619 - NZ_AP014636.1 Vibrio tritonius
274 1731990 1732187 - NZ_CP040602.1 Thiomicrorhabdus sediminis
275 731689 731886 + NC_002977.6 Methylococcus capsulatus str. Bath
276 3773563 3773757 - NZ_CP023559.1 Salinicola tamaricis
277 1250802 1250999 + NC_007484.1 Nitrosococcus oceani ATCC 19707
278 1871810 1872007 - NZ_CP072844.1 Psychrosphaera aestuarii
279 526308 526505 + NC_012108.1 Desulfobacterium autotrophicum HRM2
280 3463089 3463283 - NZ_CP018139.1 Halomonas aestuarii
281 1855257 1855451 - NZ_CP043420.1 Kushneria phosphatilytica
282 2008367 2008561 - NZ_CP021435.1 Halomonas beimenensis
283 545290 545487 + NC_018645.1 Desulfobacula toluolica Tol2
284 2791642 2791839 - NZ_CP053627.1 Xylella taiwanensis
285 619166 619363 - NZ_CP043929.1 Methylomonas rhizoryzae
286 432731 432925 + NZ_CP014226.1 Halomonas chromatireducens
287 1660953 1661153 + NZ_CP027523.1 Pseudoalteromonas carrageenovora
288 3957601 3957801 - NZ_CP019628.1 Pseudoalteromonas aliena
289 2161387 2161587 - NZ_CP011025.1 Pseudoalteromonas arctica A 37-1-2
290 2435140 2435334 - NZ_CP065435.1 Halomonas sp. SS10-MC5
291 1668787 1668984 + NC_007498.2 Syntrophotalea carbinolica DSM 2380
292 1434146 1434340 + NZ_AP012273.1 Thiolapillus brandeum
293 1413899 1414099 + NZ_CP072793.1 Thiothrix unzii
294 133189 133386 + NC_004545.1 Buchnera aphidicola str. Bp (Baizongia pistaciae)
295 3711211 3711408 - NZ_CP060731.1 Pseudoxanthomonas mexicana
296 1567805 1567999 + NZ_CP031415.1 Saccharospirillum mangrovi
297 1633154 1633348 + NZ_CP035467.1 Methylotuvimicrobium buryatense
298 1809095 1809292 - NZ_AP018560.1 Aerosticca soli
299 1895358 1895555 - NC_012691.1 Tolumonas auensis DSM 9187
300 853746 853940 - NZ_CP022684.1 Ketobacter alkanivorans
301 2402793 2402981 + NZ_CP026328.2 Acidithiobacillus caldus
302 1736535 1736732 - NZ_AP018725.1 Sulfuriflexus mobilis
303 1779185 1779379 + NZ_CP048602.1 Halomonas piezotolerans
304 1824595 1824789 + NZ_AP022843.1 Halomonas hydrothermalis
305 1882557 1882751 + NZ_CP065135.1 Halomonas venusta
306 308920 309120 - NZ_CP072133.1 Pseudoalteromonas xiamenensis
307 1506054 1506251 - NZ_AP014879.1 Sulfuricaulis limicola
308 1999744 1999941 - NZ_CP012621.1 Zobellella denitrificans
309 2048655 2048849 + NC_007963.1 Chromohalobacter salexigens DSM 3043
310 3262605 3262799 - NZ_CP021323.1 Kushneria konosiri
311 3640942 3641136 + NZ_CP021358.1 Kushneria marisflavi
312 1184157 1184357 + NZ_AP018933.1 Zymobacter palmae
313 1762438 1762632 + NC_014532.2 Halomonas elongata DSM 2581
314 1810395 1810583 + NZ_CP017689.1 Thalassotalea crassostreae
315 1004128 1004322 + NC_016112.1 Methylotuvimicrobium alcaliphilum 20Z
316 2318083 2318280 - NZ_AP017928.1 Methylocaldum marinum
317 2098968 2099162 - NC_009922.1 Alkaliphilus oremlandii OhILAs
318 1891710 1891907 - NC_015572.1 Methylomonas methanica MC09
319 1385487 1385684 - NC_016630.1 Filifactor alocis ATCC 35896
320 2618871 2619068 - NC_017033.1 Frateuria aurantia DSM 6220
321 2940753 2940950 + NZ_CP017480.1 Luteibacter rhizovicinus DSM 16549
322 2300653 2300847 - NC_020888.1 Thalassolituus oleivorans MIL-1
323 3605300 3605494 + NZ_CP048812.1 Halomonas socia
324 1003621 1003818 + NZ_CP064030.1 Dyella caseinilytica
325 2168680 2168877 - NZ_CP014841.1 Dyella thiooxydans
326 1839630 1839827 - NC_015672.1 Flexistipes sinusarabici DSM 4947
327 1402277 1402474 + NZ_CP041046.1 Luteibacter pinisoli
328 1556355 1556552 + NC_011901.1 Thioalkalivibrio sulfidiphilus HL-EbGr7
329 1560141 1560338 + NC_017583.1 Spirochaeta thermophila DSM 6578
330 1251381 1251578 + NZ_CP029843.1 Lysobacter maris
331 1215653 1215850 + NZ_CP046570.1 Xanthomonas albilineans
332 1604616 1604813 + NZ_CP012900.1 Stenotrophomonas acidaminiphila
333 27751 27945 - NZ_CP021377.1 Oceanisphaera profunda
334 1138744 1138944 - NC_015500.1 Treponema brennaborense DSM 12168
335 1042224 1042421 + NZ_CP041242.1 Lysobacter alkalisoli
336 537142 537339 + NZ_CP015519.1 Syntrophotalea acetylenivorans
337 1791016 1791213 + NC_010337.2 Heliomicrobium modesticaldum Ice1
338 5116918 5117115 - NZ_CP014476.1 Methylomonas denitrificans
339 2403488 2403685 + NZ_CP042218.1 Luteimonas granuli
340 3572350 3572544 - NC_018691.1 Alcanivorax dieselolei B5
341 1282322 1282519 + NC_014614.1 Acetoanaerobium sticklandii
342 2594866 2595063 - NZ_CP045875.1 Heliorestis convoluta
343 3056681 3056878 - NZ_LS483377.1 Stenotrophomonas maltophilia
344 735164 735358 + NZ_CP021376.1 Oceanisphaera avium
345 1377270 1377467 - NC_014758.1 Calditerrivibrio nitroreducens DSM 19672
346 3170603 3170800 - NZ_CP037883.1 Stenotrophomonas indicatrix
347 2244482 2244679 - NC_004556.1 Xylella fastidiosa Temecula1
348 2822094 2822291 - NZ_CP023406.1 Luteimonas chenhongjianii
349 2223799 2223996 - NC_014844.1 Pseudodesulfovibrio aespoeensis Aspo-2
350 2823969 2824166 + NZ_CP060711.1 Thermomonas brevis
351 1704457 1704654 - NC_018012.1 Thiocystis violascens DSM 198
352 2771441 2771641 + NC_014364.1 Sediminispirochaeta smaragdinae DSM 11293
353 3670410 3670607 - NZ_CP015249.1 Dokdonella koreensis DS-123
354 3110410 3110607 - NZ_CP048044.1 Xanthomonas citri
355 5616901 5617083 - NZ_CP018632.1 Granulosicoccus antarcticus IMCC3135
356 3907182 3907379 - NZ_CP011131.1 Lysobacter gummosus
357 3061151 3061348 - NZ_CP046603.1 Lysobacter soli
358 3724591 3724788 - NZ_CP046400.1 Pseudodesulfovibrio cashew
359 1968738 1968935 + NZ_CP011129.1 Lysobacter antibioticus
360 1799850 1800050 + NZ_CP054142.1 Treponema parvum
361 1591398 1591595 - NZ_CP016878.1 Xanthomonas hortorum
362 2969589 2969786 - NZ_LT853882.1 Xanthomonas fragariae
363 1556875 1557072 + NZ_CP007810.1 Xanthomonas oryzae pv. oryzicola
364 2163211 2163408 + NZ_CP033326.1 Xanthomonas cucurbitae
365 1983243 1983440 + NZ_CP028127.1 Xanthomonas vasicola pv. vasculorum
366 4190247 4190444 + NZ_CP043476.1 Xanthomonas hyacinthi
367 1968007 1968204 + NZ_CP058243.1 Xanthomonas campestris pv. raphani
368 2995883 2996080 - NZ_CP072268.1 Xanthomonas euvesicatoria pv. alfalfae
369 911755 911952 - NZ_CP018725.1 Xanthomonas vesicatoria ATCC 35937
370 4696386 4696577 - NC_007645.1 Hahella chejuensis KCTC 2396
371 1857945 1858142 + NZ_CP023465.1 Lysobacter capsici
372 3918903 3919100 + NZ_LT907975.1 Pseudodesulfovibrio profundus
373 2064728 2064925 + NC_013943.1 Denitrovibrio acetiphilus DSM 12809
374 1841181 1841378 + NZ_AP014940.1 Lysobacter enzymogenes
375 1285840 1286037 - NZ_CP011412.1 Sedimenticola thiotaurini
376 177340 177537 + NZ_CP071517.1 Lysobacter arenosi
377 2109578 2109772 - NC_008260.1 Alcanivorax borkumensis SK2
378 914337 914537 - NC_015714.1 Treponema paraluiscuniculi Cuniculi A
379 2180807 2181004 - NZ_CP051183.1 Bermanella marisrubri
380 1130890 1131087 + NC_016147.2 Pseudoxanthomonas spadix BD-a59
381 1581910 1582107 + NC_007517.1 Geobacter metallireducens GS-15
382 1363865 1364062 + NZ_CP035704.1 Pseudolysobacter antarcticus
383 1541152 1541352 - NC_015577.1 Treponema azotonutricium ZAS-9
384 2345227 2345424 + NC_011768.1 Desulfatibacillum aliphaticivorans
385 1591668 1591865 - NC_006138.1 Desulfotalea psychrophila LSv54
386 644290 644487 + NC_015520.1 Mahella australiensis 50-1 BON
387 2307456 2307650 - NZ_CP004387.1 Alcanivorax pacificus W11-5
388 916097 916294 - NZ_CP036150.1 Oceanispirochaeta crateris
389 3453179 3453382 - NZ_CP027860.1 Ahniella affigens
390 731095 731283 + NZ_LR134365.1 Cardiobacterium hominis
391 1011107 1011295 + NZ_CP068345.1 Succinivibrio dextrinosolvens
392 4853156 4853347 - NZ_CP021425.1 Oleiphilus messinensis
393 187867 188064 - NZ_CP011060.1 Borrelia hermsii CC1
394 3649195 3649392 - NC_009943.1 Desulfococcus oleovorans Hxd3
395 2344947 2345144 - NZ_LR134376.1 Aeromonas encheleia
396 1188308 1188505 + NZ_CP051883.1 Aeromonas salmonicida
397 2480305 2480502 - NZ_AP022188.1 Aeromonas media
398 1783750 1783944 - NZ_CP013189.1 Pseudohongiella spirulinae
399 2576117 2576308 - NC_013216.1 Desulfofarcimen acetoxidans DSM 771
400 187590 187787 - NC_008710.1 Borrelia turicatae 91E135
401 459106 459303 - NZ_CP060820.1 Lysobacter solisilvae (ex Woo and Kim 2020)
402 187514 187711 - NZ_CP007022.1 Borrelia parkeri HR1
403 1204705 1204902 + NZ_CP007031.1 Marichromatium purpuratum 984
404 200088 200285 - NC_011244.1 Borrelia recurrentis A1
405 188739 188927 - NC_015921.1 Borreliella bissettii DN127
406 1649982 1650173 + NC_017464.1 Ignavibacterium album JCM 16511
407 3041095 3041289 - NC_003910.7 Colwellia psychrerythraea 34H
408 2062506 2062703 - NC_014315.1 Nitrosococcus watsonii C-113
409 1722512 1722703 + NC_009633.1 Alkaliphilus metalliredigens QYMF
410 175070 175267 - NZ_CP030241.1 Moraxella bovis
411 314083 314280 - NZ_CP065728.1 Moraxella nonliquefaciens
412 1935740 1935931 - NZ_CP017715.1 Marinobacter salinus
413 3081999 3082190 - NZ_CP020931.1 Marinobacter salarius
414 1103242 1103433 + NC_017506.1 Marinobacter adhaerens HP15
415 2299284 2299478 - NZ_CP031518.1 Treponema ruminis
416 893027 893224 + NZ_CP007452.1 Peptoclostridium acidaminophilum DSM 3953
417 1641151 1641348 - NC_014654.1 Halanaerobium hydrogeniformans
418 190248 190436 - NZ_CP015796.1 Borreliella mayonii
419 188777 188965 - NZ_CP028861.1 Borreliella garinii
420 188293 188481 - NZ_CP044535.1 Borrelia maritima
421 1323506 1323703 - NC_023035.1 Salinispira pacifica
++ More..
Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_CP006569.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF00587.27 0.88 370 646.0 same-strand tRNA synthetase class II core domain (G, H, P, S and T)
2 PF03129.22 0.88 370 646 same-strand Anticodon binding domain
3 PF07973.16 0.88 369 646 same-strand Threonyl and Alanyl tRNA synthetase second additional domain
4 PF00707.24 0.99 416 97.0 same-strand Translation initiation factor IF-3, C-terminal domain
5 PF00453.20 1.0 420 39 same-strand Ribosomal protein L20
6 PF01409.22 0.73 308 699.0 same-strand tRNA synthetases class II core domain (F)
7 PF17759.3 0.73 306 1713 same-strand Phenylalanyl tRNA synthetase beta chain CLM domain
8 PF03483.19 0.73 306 1713 same-strand B3/4 domain
9 PF03147.16 0.73 306 1713 same-strand Ferredoxin-fold anticodon binding domain
10 PF03484.17 0.73 306 1713 same-strand tRNA synthetase B5 domain
11 PF01588.22 0.73 306 1713.0 same-strand Putative tRNA binding domain
12 PF00216.23 0.69 290 4107 same-strand Bacterial DNA-binding protein
13 PF02912.20 0.73 306 698 same-strand Aminoacyl tRNA synthetase class II, N-terminal domain
14 PF02824.23 0.86 363 647 same-strand TGS domain
++ More..