ProsmORF-pred
Result : Q8D2V0
Protein Information
Information Type Description
Protein name UPF0434 protein WIGBR2520
NCBI Accession ID BA000021.3
Organism Wigglesworthia glossinidia brevipalpis
Left 295563
Right 295733
Strand -
Nucleotide Sequence ATGGATAAAAAATTGTTAAATATAATTGCTTGTCCAATCTGTAATAAAAAATTAAATTTTGATTTGATTAGAAAAGAACTTATTTGTGAATTTGATTCAGTAGCTTTTCCAATAAAAGATGGAATTCCAATTTTGCTTAGGGATTCCAGTTATCCTATTAAAAAAAGGTAA
Sequence MDKKLLNIIACPICNKKLNFDLIRKELICEFDSVAFPIKDGIPILLRDSSYPIKKR
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl01066. Profile Description: Trm112p-like protein. The function of this family is uncertain. The bacterial members are about 60-70 amino acids in length and the eukaryotic examples are about 120 amino acids in length. The C-terminus contains the strongest conservation. Trm112p is required for tRNA methylation in S. cerevisiae and is found in complexes with 2 tRNA methylases (TRM9 and TRM11) also with putative methyltransferase YDR140W. The zinc-finger protein Ynr046w is plurifunctional and a component of the eRF1 methyltransferase in yeast. The crystal structure of Ynr046w has been determined to 1.7 A resolution. It comprises a zinc-binding domain built from both the N- and C-terminal sequences and an inserted domain, absent from bacterial and archaeal orthologs of the protein, composed of three alpha-helices.
Pubmed ID 12219091
Domain CDD:412721
Functional Category Others
Uniprot ID Q8D2V0
ORF Length (Amino Acid) 56
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 199
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 546362 546526 + NC_016893.1 Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)
2 550594 550773 - NZ_CP037953.1 Permianibacter aggregans
3 2921670 2921852 - NZ_CP054058.1 Scandinavium goeteborgense
4 3379203 3379385 - NZ_CP065838.1 Klebsiella quasipneumoniae
5 1889273 1889455 + NC_016845.1 Klebsiella pneumoniae subsp. pneumoniae HS11286
6 3855203 3855385 - NZ_CP036175.1 Klebsiella huaxiensis
7 1681166 1681348 + NZ_CP063425.1 Kosakonia pseudosacchari
8 2570145 2570327 - NC_017910.1 Shimwellia blattae DSM 4481 = NBRC 105725
9 1556528 1556710 + NC_015968.1 Enterobacter soli
10 1572681 1572860 + NZ_CP005974.1 Photobacterium gaetbulicola Gung47
11 3010738 3010920 - NZ_CP035129.1 Kosakonia cowanii
12 2179059 2179238 + NZ_CP029736.1 Providencia rettgeri
13 735658 735837 + NZ_CP031123.2 Providencia huaxiensis
14 1608032 1608214 + NZ_AP022508.1 Enterobacter bugandensis
15 1694977 1695159 + NZ_CP012871.1 [Enterobacter] lignolyticus
16 1588817 1588999 + NZ_CP027986.1 Enterobacter sichuanensis
17 1571975 1572157 + NZ_CP017184.1 Enterobacter roggenkampii
18 958172 958354 - NZ_CP025034.2 Enterobacter sp. SGAir0187
19 777128 777310 + NZ_CP017279.1 Enterobacter ludwigii
20 1865081 1865263 - NZ_CP045769.1 Enterobacter cancerogenus
21 1805178 1805360 + NZ_CP043318.1 Enterobacter chengduensis
22 2884508 2884690 + NZ_CP020388.1 Pluralibacter gergoviae
23 2694344 2694526 - NZ_CP051652.1 Pectobacterium carotovorum
24 419556 419726 + NC_002971.4 Coxiella burnetii RSA 493
25 3767633 3767815 - NZ_CP050508.1 Raoultella terrigena
26 1546011 1546193 + NZ_CP012264.1 Cronobacter condimenti 1330
27 3239524 3239706 + NZ_CP065640.1 Serratia rubidaea
28 1847857 1848039 - NZ_CP027107.1 Cronobacter sakazakii
29 1992799 1992981 - NC_009792.1 Citrobacter koseri ATCC BAA-895
30 3511092 3511274 + NZ_CP053416.1 Salmonella bongori
31 637239 637421 - NZ_CP044098.1 Citrobacter portucalensis
32 2167732 2167914 + NZ_CP025799.1 Dickeya zeae
33 4015354 4015536 + NZ_CP011254.1 Serratia fonticola
34 993375 993557 + NZ_AP014857.1 Escherichia albertii
35 3190185 3190367 - NZ_CP013990.1 Leclercia adecarboxylata
36 3632708 3632890 - NZ_CP054254.1 Klebsiella variicola
37 1795558 1795737 - NZ_CP016176.1 Xenorhabdus hominickii
38 137772 137948 - NZ_CP006664.1 Edwardsiella anguillarum ET080813
39 2597383 2597565 - NZ_CP013940.1 Cronobacter malonaticus LMG 23826
40 4478888 4479070 + NZ_CP033744.1 Citrobacter freundii
41 1865061 1865219 + NZ_CP046378.1 Shewanella algae
42 1438240 1438422 + NZ_CP029185.2 Limnobaculum parvum
43 3036704 3036886 - NZ_CP006569.1 Sodalis praecaptivus
44 4301649 4301831 + NZ_CP049115.1 Pantoea stewartii
45 4135224 4135406 + NZ_AP019007.1 Enterobacter oligotrophicus
46 1831586 1831723 + NZ_CP022358.1 Shewanella bicestrii
47 3983925 3984107 - NZ_CP051548.1 Phytobacter diazotrophicus
48 2748658 2748840 - NZ_CP011602.1 Phytobacter ursingii
49 3415998 3416180 - NZ_LR134475.1 Klebsiella aerogenes
50 1617600 1617782 + NZ_CP009756.1 Enterobacter cloacae
51 4024974 4025156 - NZ_CP060111.1 Klebsiella michiganensis
52 2446257 2446445 - NC_012691.1 Tolumonas auensis DSM 9187
53 2928416 2928598 - NZ_AP023184.1 Buttiauxella agrestis
54 3843485 3843667 + NZ_CP015750.1 Pectobacterium wasabiae CFBP 3304
55 1470936 1471118 + NZ_CP061527.1 Shigella dysenteriae
56 954458 954640 + NC_004337.2 Shigella flexneri 2a str. 301
57 970673 970855 + NC_000913.3 Escherichia coli str. K-12 substr. MG1655
58 4249093 4249275 - NZ_CP007044.2 Chania multitudinisentens RB-25
59 1100316 1100498 + NC_002695.2 Escherichia coli O157:H7 str. Sakai
60 1377071 1377253 + NZ_CP034148.1 Pantoea agglomerans
61 2747127 2747309 - NZ_CP045720.1 Pantoea eucalypti
62 1829950 1830132 + NC_015567.1 Serratia plymuthica AS9
63 1708439 1708621 + NZ_CP015113.1 Kosakonia radicincitans
64 1546603 1546785 + NZ_CP012257.1 Cronobacter universalis NCTC 9529
65 1644571 1644753 + NZ_LR134340.1 Escherichia marmotae
66 3229988 3230170 + NZ_LT556085.1 Citrobacter amalonaticus
67 3861626 3861808 - NZ_CP045205.1 Citrobacter telavivensis
68 3015361 3015543 - NC_017554.1 Pantoea ananatis PA13
69 1296249 1296431 - NZ_CP045300.1 Kosakonia arachidis
70 3482261 3482443 - NZ_CP014007.2 Kosakonia oryzae
71 44686 44868 + NZ_CP057657.1 Escherichia fergusonii
72 1448565 1448744 + NZ_CP046268.1 Vibrio spartinae
73 2463356 2463547 - NZ_CP043929.1 Methylomonas rhizoryzae
74 1857606 1857788 + NZ_LT906479.1 Serratia ficaria
75 498832 499014 + NZ_CP023529.1 Lelliottia amnigena
76 4375549 4375731 + NZ_CP015137.1 Dickeya solani IPO 2222
77 2224232 2224414 + NC_014500.1 Dickeya dadantii 3937
78 586521 586703 - NZ_CP009460.1 Dickeya fangzhongdai
79 1532169 1532348 - NZ_CP035688.1 Vibrio metoecus
80 1875668 1875847 - NZ_AP014524.1 Vibrio cholerae MS6
81 2831379 2831561 - NZ_CP034938.1 Pectobacterium odoriferum
82 1874859 1875047 - NZ_CP040449.1 Aeromonas simiae
83 3077500 3077676 + NZ_CP023706.1 Edwardsiella tarda
84 2100241 2100423 - NZ_CP047475.1 Vibrio astriarenae
85 2976835 2977017 - NZ_CP045845.1 Kluyvera intermedia
86 2375563 2375736 + NC_011566.1 Shewanella piezotolerans WP3
87 2322528 2322710 - NZ_CP042220.2 Dickeya poaceiphila
88 826828 827007 - NC_013892.1 Xenorhabdus bovienii SS-2004
89 1951264 1951443 + NC_005126.1 Photorhabdus laumondii subsp. laumondii TTO1
90 1592495 1592674 + NZ_CP040990.1 Vibrio furnissii
91 1738408 1738590 - NZ_CP038469.1 Citrobacter tructae
92 1767376 1767558 + NZ_CP048784.1 Serratia liquefaciens
93 3479368 3479550 - NZ_CP041247.1 Raoultella electrica
94 2161679 2161861 + NZ_CP065044.1 Pectobacterium aroidearum
95 2608316 2608456 - NC_007954.1 Shewanella denitrificans OS217
96 2847796 2847942 - NC_008345.1 Shewanella frigidimarina NCIMB 400
97 2488387 2488569 - NZ_CP012268.1 Cronobacter muytjensii ATCC 51329
98 3649344 3649526 - NZ_CP046672.1 Raoultella ornithinolytica
99 2155987 2156169 + NZ_CP031560.1 Dickeya dianthicola
100 3232088 3232270 - NZ_CP071320.1 Serratia ureilytica
101 1581584 1581766 + NZ_CP061511.1 Mixta calida
102 3123122 3123301 - NZ_CP048796.1 Providencia vermicola
103 1074488 1074670 + NC_003197.2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
104 2049221 2049403 - NZ_CP065534.1 Lonsdalea populi
105 2252294 2252473 - NZ_CP060401.1 Xenorhabdus nematophila
106 3595455 3595637 + NZ_CP026047.1 Raoultella planticola
107 1939055 1939234 - NZ_CP045350.1 Vibrio aquimaris
108 2252494 2252670 + NC_010506.1 Shewanella woodyi ATCC 51908
109 39665 39847 - NZ_CP019706.1 Pantoea alhagi
110 895815 895997 + NZ_CP017482.1 Pectobacterium polaris
111 2726802 2726984 - NZ_CP034036.1 Brenneria nigrifluens DSM 30175 = ATCC 13028
112 3256265 3256444 - NC_012962.1 Photorhabdus asymbiotica
113 3672683 3672862 + NZ_CP011104.1 Photorhabdus thracensis
114 2466931 2467113 - NZ_LR134531.1 Pragia fontium
115 2083525 2083704 - NZ_CP009354.1 Vibrio tubiashii ATCC 19109
116 1084715 1084897 + NC_013716.1 Citrobacter rodentium ICC168
117 3296846 3297028 - NZ_CP023009.1 Lonsdalea britannica
118 2159750 2159932 - NZ_CP034035.1 Brenneria rubrifaciens
119 1818515 1818697 + NZ_CP038662.1 Serratia nematodiphila
120 2092390 2092572 + NZ_CP038498.1 Pectobacterium punjabense
121 3689525 3689707 + NZ_CP047495.1 Pectobacterium brasiliense
122 1396312 1396488 + NZ_CP016043.1 Edwardsiella hoshinae
123 3698744 3698923 - NZ_CP023536.1 Providencia alcalifaciens
124 1124503 1124685 + NZ_CP016948.1 Serratia surfactantfaciens
125 1649502 1649681 - NZ_CP014035.2 Vibrio fluvialis
126 3057973 3058155 - NZ_LR134201.1 Cedecea lapagei
127 2325231 2325410 - NZ_CP044069.1 Vibrio vulnificus
128 2155015 2155188 + NC_009901.1 Shewanella pealeana ATCC 700345
129 2207076 2207258 + NZ_CP009125.1 Pectobacterium atrosepticum
130 2140413 2140595 + NZ_LT615367.1 Dickeya aquatica
131 2117610 2117789 - NZ_FO704551.1 Xenorhabdus poinarii G6
132 2306836 2307015 - NZ_AP014635.1 Vibrio tritonius
133 1125411 1125590 + NZ_AP019651.1 Vibrio taketomensis
134 1684658 1684837 - NZ_AP019657.1 Vibrio ponticus
135 1576965 1577144 + NZ_FO704550.1 Xenorhabdus doucetiae
136 1678819 1678995 + NZ_CP050150.1 Hafnia alvei
137 2063621 2063803 - NZ_CP014137.1 Brenneria goodwinii
138 38682 38861 + NZ_CP046793.1 Vibrio metschnikovii
139 3680715 3680897 + NZ_CP011078.1 Yersinia ruckeri
140 2951870 2952013 - NZ_CP020472.1 Shewanella japonica
141 1021517 1021696 + NZ_CP022741.1 Vibrio qinghaiensis
142 2630233 2630412 - NC_013456.1 Vibrio antiquarius
143 818496 818678 + NZ_CP028271.1 Mixta intestinalis
144 2774905 2775087 + NC_007645.1 Hahella chejuensis KCTC 2396
145 1699874 1700053 - NZ_CP033078.1 Vibrio zhugei
146 832637 832819 + NZ_CP011412.1 Sedimenticola thiotaurini
147 2915677 2915847 - NZ_LR134376.1 Aeromonas encheleia
148 3122353 3122499 - NZ_CP034015.1 Shewanella livingstonensis
149 1767961 1768140 - NZ_CP016414.1 Vibrio scophthalmi
150 993398 993577 + NZ_CP030788.1 Vibrio campbellii
151 2038292 2038471 - NZ_CP018312.1 Vibrio rotiferianus
152 789562 789741 - NZ_CP019959.1 Vibrio owensii
153 1279244 1279423 + NZ_CP009467.1 Vibrio harveyi
154 1178760 1178939 - NZ_CP025792.1 Vibrio jasicida 090810c
155 2703065 2703211 - NZ_CP041036.1 Shewanella polaris
156 1933018 1933200 - NZ_CP015749.1 Pectobacterium parmentieri
157 1860069 1860248 - NZ_CP009977.1 Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
158 2860944 2861123 - NZ_CP072455.1 Xenorhabdus budapestensis
159 1283197 1283376 + NZ_CP047349.1 Proteus terrae subsp. cibarius
160 2885653 2885832 + NZ_CP026364.1 Proteus hauseri
161 792440 792619 + NC_010554.1 Proteus mirabilis HI4320
162 1190165 1190308 - NZ_CP041783.1 Shewanella donghaensis
163 1019634 1019813 + NZ_CP032093.1 Vibrio alfacsensis
164 1409374 1409556 + NZ_LN907827.1 Erwinia gerundensis
165 1386851 1387036 + NZ_CP028901.1 Algicoccus marinus
166 1692350 1692535 + NZ_CP041730.1 Chitinimonas arctica
167 3371735 3371917 + NZ_CP042941.1 Atlantibacter hermannii
168 1534941 1535123 - NZ_CP040021.1 Salinivibrio kushneri
169 3413044 3413184 - NC_009831.1 Shewanella sediminis HAW-EB3
170 1208180 1208353 + NZ_CP022355.1 Paraphotobacterium marinum
171 940177 940359 + NZ_AP019312.1 Chromobacterium haemolyticum
172 1358608 1358793 - NZ_CP045302.1 Azotobacter salinestris
173 1772311 1772454 + NZ_CP037951.1 Parashewanella tropica
174 99774 99956 - NZ_LR134418.1 Legionella adelaidensis
175 320145 320327 - NZ_CP029495.1 Chromobacterium phragmitis
176 1632514 1632696 - NZ_CP017707.1 Chromobacterium vaccinii
177 2234318 2234500 + NC_008344.1 Nitrosomonas eutropha C91
178 471127 471294 - NZ_CP021377.1 Oceanisphaera profunda
179 1459209 1459394 + NC_012560.1 Azotobacter vinelandii DJ
180 2596706 2596873 - NZ_CP012621.1 Zobellella denitrificans
181 1284741 1284920 + NZ_AP018724.1 Sulfurivermis fontis
182 1317975 1318160 + NZ_CP011835.1 Azotobacter chroococcum
183 1076330 1076506 - NC_017161.1 Hydrogenobacter thermophilus TK-6
184 3642952 3643134 - NC_005085.1 Chromobacterium violaceum ATCC 12472
185 2348395 2348577 + NC_004757.1 Nitrosomonas europaea ATCC 19718
186 1132450 1132629 + NC_008709.1 Psychromonas ingrahamii 37
187 2401436 2401618 - NZ_CP043473.1 Chromobacterium paludis
188 1189655 1189840 - NC_007614.1 Nitrosospira multiformis ATCC 25196
189 2123652 2123831 - NZ_LT906451.1 Legionella lansingensis
190 943288 943467 + NZ_LN681225.1 Legionella hackeliae
191 843416 843595 + NZ_CP025491.2 Legionella sainthelensi
192 2821246 2821425 + NZ_CP021106.3 Nitrosospira lacus
193 2391364 2391543 - NZ_CP011451.1 Nitrosomonas communis
194 1273697 1273876 - NZ_LR134374.1 Legionella spiritensis
195 802160 802339 + NZ_CP038254.1 Legionella israelensis
196 1035563 1035742 + NZ_LN614830.1 Tatlockia micdadei
197 728570 728749 + NZ_CP012371.1 Nitrosospira briensis C-128
198 1161673 1161855 + NZ_CP013341.1 Nitrosomonas ureae
199 1447170 1447340 - NC_009719.1 Parvibaculum lavamentivorans DS-1
200 1407897 1408076 + NZ_LT906442.1 Legionella waltersii
++ More..
Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_CP037953.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF00664.25 0.79 158 1673 same-strand ABC transporter transmembrane region
2 PF00005.29 0.8 160 1848 same-strand ABC transporter
3 PF02348.21 0.87 174 -3 same-strand Cytidylyltransferase
4 PF02606.16 0.9 179 347.5 same-strand Tetraacyldisaccharide-1-P 4'-kinase
5 PF03772.18 0.78 156 3561 same-strand Competence protein
6 PF00753.29 0.76 152 3547.5 same-strand Metallo-beta-lactamase superfamily
++ More..