Result : Q8D2Q8
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 30S ribosomal protein S20 |
| NCBI Accession ID | BA000021.3 |
| Organism | Wigglesworthia glossinidia brevipalpis |
| Left | 348688 |
| Right | 348954 |
| Strand | + |
| Nucleotide Sequence | TTGGCTAATATAAAATCTTCTAAAAAAAGATCAATTCAATCAGAAAAAAAACGCAAATATAATTCTAGCAAAAAATCTATGATAAGAAGTTTTATTAAAAAAGTAAAAAATTCTATCTTAAAAAAAGAAAAAGACACAATAAATAATTCATTTATAGAGATGCAATCTATTTTAGACAGATATGCAAAAAAAAATTTAATACACAAAAATAAAGCATCTAGGCTTAAGTCAAGATTATCAAAAAAAATTAAATTTATTTTTAAATAA |
| Sequence | MANIKSSKKRSIQSEKKRKYNSSKKSMIRSFIKKVKNSILKKEKDTINNSFIEMQSILDRYAKKNLIHKNKASRLKSRLSKKIKFIFK |
| Source of smORF | Swiss-Prot |
| Function | Binds directly to 16S ribosomal RNA. {ECO:0000255|HAMAP-Rule:MF_00500}. |
| Pubmed ID | 12219091 |
| Domain | CDD:412349 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | Q8D2Q8 |
| ORF Length (Amino Acid) | 88 |
++ More..
| Conservation Analysis |
No. of Species: 257
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 2641651 | 2641914 | - | NZ_CP011254.1 | Serratia fonticola |
| 2 | 492414 | 492686 | - | NC_016893.1 | Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) |
| 3 | 4371602 | 4371865 | + | NZ_CP071320.1 | Serratia ureilytica |
| 4 | 17577 | 17840 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 5 | 694129 | 694392 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 6 | 4222130 | 4222390 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 7 | 2883738 | 2883998 | + | NZ_CP071325.1 | Photobacterium ganghwense |
| 8 | 3954641 | 3954904 | + | NZ_CP011118.1 | Yersinia enterocolitica |
| 9 | 658757 | 659020 | - | NC_012880.1 | Musicola paradisiaca Ech703 |
| 10 | 2923763 | 2924023 | + | NZ_CP070624.1 | Photobacterium damselae subsp. damselae |
| 11 | 2860370 | 2860633 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 12 | 2217474 | 2217737 | - | NZ_CP065640.1 | Serratia rubidaea |
| 13 | 5277235 | 5277498 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 14 | 775439 | 775702 | - | NZ_LT906479.1 | Serratia ficaria |
| 15 | 719965 | 720225 | + | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 16 | 670379 | 670642 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 17 | 775310 | 775570 | + | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 18 | 623450 | 623713 | - | NC_012962.1 | Photorhabdus asymbiotica |
| 19 | 1256698 | 1256958 | + | NZ_CP011104.1 | Photorhabdus thracensis |
| 20 | 756111 | 756374 | - | NZ_LN907827.1 | Erwinia gerundensis |
| 21 | 3223740 | 3224003 | - | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 22 | 692408 | 692671 | - | NZ_CP017184.1 | Enterobacter roggenkampii |
| 23 | 3833412 | 3833675 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 24 | 3898521 | 3898784 | + | NZ_CP006569.1 | Sodalis praecaptivus |
| 25 | 707910 | 708173 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 26 | 740511 | 740771 | - | NZ_CP048796.1 | Providencia vermicola |
| 27 | 3613683 | 3613943 | + | NZ_CP005974.1 | Photobacterium gaetbulicola Gung47 |
| 28 | 2742307 | 2742567 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 29 | 782073 | 782333 | - | NZ_LS483422.1 | Providencia heimbachae |
| 30 | 3943104 | 3943367 | + | NZ_CP035129.1 | Kosakonia cowanii |
| 31 | 436001 | 436264 | + | NZ_LR134167.1 | Avibacterium volantium |
| 32 | 4119350 | 4119613 | - | NZ_CP023529.1 | Lelliottia amnigena |
| 33 | 700440 | 700703 | - | NZ_AP022508.1 | Enterobacter bugandensis |
| 34 | 672832 | 673095 | - | NZ_CP027986.1 | Enterobacter sichuanensis |
| 35 | 673442 | 673705 | - | NC_015968.1 | Enterobacter soli |
| 36 | 1832157 | 1832420 | + | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 37 | 718161 | 718424 | - | NZ_CP009756.1 | Enterobacter cloacae |
| 38 | 2849989 | 2850252 | + | NZ_CP045769.1 | Enterobacter cancerogenus |
| 39 | 2330264 | 2330527 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 40 | 743276 | 743539 | - | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 41 | 817637 | 817900 | - | NZ_CP043318.1 | Enterobacter chengduensis |
| 42 | 706359 | 706622 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 43 | 5128195 | 5128458 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 44 | 63699 | 63962 | - | NZ_CP006944.1 | Mannheimia varigena USDA-ARS-USMARC-1312 |
| 45 | 1041508 | 1041771 | + | NZ_CP042941.1 | Atlantibacter hermannii |
| 46 | 3489195 | 3489458 | + | NZ_CP015581.1 | Tatumella citrea |
| 47 | 3444073 | 3444336 | + | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 48 | 2811168 | 2811431 | + | NZ_LS483470.1 | Leminorella richardii |
| 49 | 3204376 | 3204639 | + | NZ_CP034035.1 | Brenneria rubrifaciens |
| 50 | 3621767 | 3622030 | - | NZ_CP009787.1 | Yersinia rohdei |
| 51 | 3414390 | 3414653 | - | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 52 | 1979881 | 1980144 | - | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 53 | 3851693 | 3851956 | + | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 54 | 766374 | 766637 | - | NZ_CP043727.1 | Yersinia canariae |
| 55 | 757198 | 757461 | - | NZ_CP032487.1 | Yersinia hibernica |
| 56 | 2364191 | 2364454 | - | NZ_CP007230.1 | Yersinia similis |
| 57 | 3934292 | 3934555 | + | NZ_CP046293.1 | Yersinia intermedia |
| 58 | 2515265 | 2515525 | + | NZ_LS483250.1 | Moritella yayanosii |
| 59 | 2607422 | 2607682 | - | NZ_CP016176.1 | Xenorhabdus hominickii |
| 60 | 198354 | 198617 | - | NZ_CP016604.1 | Otariodibacter oris |
| 61 | 3414420 | 3414680 | + | NZ_CP044399.1 | Moritella marina ATCC 15381 |
| 62 | 3816432 | 3816695 | + | NZ_CP050150.1 | Hafnia alvei |
| 63 | 4041190 | 4041450 | + | NC_008709.1 | Psychromonas ingrahamii 37 |
| 64 | 3577163 | 3577426 | - | NZ_CP049115.1 | Pantoea stewartii |
| 65 | 3823795 | 3824058 | + | NC_017554.1 | Pantoea ananatis PA13 |
| 66 | 509252 | 509515 | - | NZ_CP061280.1 | Mannheimia bovis |
| 67 | 102118 | 102378 | + | NZ_CP029736.1 | Providencia rettgeri |
| 68 | 103334 | 103594 | - | NZ_CP031123.2 | Providencia huaxiensis |
| 69 | 363464 | 363727 | + | NZ_CP046531.1 | Mannheimia ovis |
| 70 | 390818 | 391081 | + | NZ_CP055305.1 | Mannheimia pernigra |
| 71 | 878463 | 878726 | - | NZ_LR134531.1 | Pragia fontium |
| 72 | 2243032 | 2243292 | - | NZ_CP041660.1 | Catenovulum sediminis |
| 73 | 3538098 | 3538361 | - | NZ_CP009460.1 | Dickeya fangzhongdai |
| 74 | 1369886 | 1370149 | + | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 75 | 641852 | 642115 | - | NZ_CP034148.1 | Pantoea agglomerans |
| 76 | 3463704 | 3463967 | + | NZ_CP045720.1 | Pantoea eucalypti |
| 77 | 3402966 | 3403229 | + | NZ_CP038853.1 | Pantoea vagans |
| 78 | 1693222 | 1693482 | + | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 79 | 630889 | 631152 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 80 | 4018107 | 4018370 | + | NZ_CP025799.1 | Dickeya zeae |
| 81 | 622204 | 622467 | - | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 82 | 4460432 | 4460692 | + | NZ_CP028897.1 | Dongshaea marina |
| 83 | 4203325 | 4203588 | + | NZ_CP031560.1 | Dickeya dianthicola |
| 84 | 4191818 | 4192081 | + | NC_014500.1 | Dickeya dadantii 3937 |
| 85 | 325554 | 325814 | + | NZ_CP023536.1 | Providencia alcalifaciens |
| 86 | 1936581 | 1936844 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 87 | 790606 | 790869 | - | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 88 | 3038313 | 3038576 | + | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 89 | 3186069 | 3186332 | + | NZ_CP023567.1 | Erwinia pyrifoliae |
| 90 | 806546 | 806809 | - | NC_014306.1 | Erwinia billingiae Eb661 |
| 91 | 3888448 | 3888711 | + | NZ_LT615367.1 | Dickeya aquatica |
| 92 | 4097623 | 4097886 | + | NZ_CP013990.1 | Leclercia adecarboxylata |
| 93 | 1989628 | 1989891 | - | NZ_CP040428.1 | Jejubacter calystegiae |
| 94 | 31536 | 31799 | - | NZ_LS483429.1 | Haemophilus aegyptius |
| 95 | 2383639 | 2383899 | + | NZ_CP072844.1 | Psychrosphaera aestuarii |
| 96 | 1699818 | 1700078 | + | NZ_CP021376.1 | Oceanisphaera avium |
| 97 | 1046878 | 1047141 | + | NZ_CP023706.1 | Edwardsiella tarda |
| 98 | 3073228 | 3073491 | + | NZ_CP016043.1 | Edwardsiella hoshinae |
| 99 | 5114987 | 5115250 | + | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 100 | 3840944 | 3841207 | + | NZ_CP011602.1 | Phytobacter ursingii |
| 101 | 426240 | 426503 | - | NZ_CP029206.1 | Actinobacillus porcitonsillarum |
| 102 | 3925121 | 3925384 | + | NZ_CP045845.1 | Kluyvera intermedia |
| 103 | 2656687 | 2656950 | + | NZ_CP038469.1 | Citrobacter tructae |
| 104 | 1593903 | 1594166 | + | NZ_CP044098.1 | Citrobacter portucalensis |
| 105 | 3462090 | 3462353 | - | NZ_CP033744.1 | Citrobacter freundii |
| 106 | 2238490 | 2238753 | - | NZ_LT556085.1 | Citrobacter amalonaticus |
| 107 | 4486434 | 4486697 | + | NZ_CP041247.1 | Raoultella electrica |
| 108 | 4886673 | 4886936 | + | NZ_CP045205.1 | Citrobacter telavivensis |
| 109 | 2515393 | 2515656 | - | NZ_CP026047.1 | Raoultella planticola |
| 110 | 4715748 | 4716011 | + | NZ_CP046672.1 | Raoultella ornithinolytica |
| 111 | 4825443 | 4825706 | + | NZ_CP050508.1 | Raoultella terrigena |
| 112 | 5190791 | 5191054 | + | NZ_CP060111.1 | Klebsiella michiganensis |
| 113 | 5089105 | 5089368 | + | NZ_CP036175.1 | Klebsiella huaxiensis |
| 114 | 1535774 | 1536037 | - | NZ_LT906448.1 | Pasteurella dagmatis |
| 115 | 2345633 | 2345893 | - | NZ_CP021377.1 | Oceanisphaera profunda |
| 116 | 2312755 | 2313018 | - | NZ_CP047495.1 | Pectobacterium brasiliense |
| 117 | 3042790 | 3043053 | + | NZ_CP017482.1 | Pectobacterium polaris |
| 118 | 3574804 | 3575067 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 119 | 3549802 | 3550065 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 120 | 20815 | 21078 | - | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 121 | 23627 | 23890 | - | NZ_AP014857.1 | Escherichia albertii |
| 122 | 25221 | 25484 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 123 | 726175 | 726438 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 124 | 4044118 | 4044381 | + | NZ_CP038498.1 | Pectobacterium punjabense |
| 125 | 787539 | 787802 | - | NZ_CP065044.1 | Pectobacterium aroidearum |
| 126 | 4893054 | 4893317 | - | NZ_CP015749.1 | Pectobacterium parmentieri |
| 127 | 968373 | 968636 | + | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 128 | 4454539 | 4454802 | + | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 129 | 768277 | 768540 | - | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 130 | 26742 | 27005 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 131 | 4726527 | 4726790 | + | NZ_CP054254.1 | Klebsiella variicola |
| 132 | 3901425 | 3901688 | + | NZ_LR134201.1 | Cedecea lapagei |
| 133 | 4178601 | 4178864 | + | NZ_CP023525.1 | Cedecea neteri |
| 134 | 4078905 | 4079165 | + | NZ_CP072425.1 | Pseudoalteromonas viridis |
| 135 | 2715549 | 2715812 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 136 | 3454872 | 3455135 | + | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 137 | 723650 | 723913 | - | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 138 | 3911233 | 3911496 | + | NZ_CP054058.1 | Scandinavium goeteborgense |
| 139 | 3153962 | 3154222 | + | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 140 | 1051794 | 1052057 | + | NZ_LR134327.1 | Aggregatibacter aphrophilus ATCC 33389 |
| 141 | 1821598 | 1821861 | - | NZ_CP020388.1 | Pluralibacter gergoviae |
| 142 | 604313 | 604573 | - | NZ_CP031416.1 | Gallaecimonas mangrovi |
| 143 | 2757332 | 2757595 | + | NZ_CP007445.1 | Gilliamella apicola |
| 144 | 643016 | 643279 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 145 | 4238004 | 4238267 | + | NZ_CP034938.1 | Pectobacterium odoriferum |
| 146 | 1333391 | 1333654 | + | NC_011852.1 | Glaesserella parasuis SH0165 |
| 147 | 1722741 | 1723004 | - | NZ_CP018804.1 | Histophilus somni |
| 148 | 662875 | 663138 | - | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 149 | 2370499 | 2370762 | - | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 150 | 451231 | 451494 | - | NZ_CP065534.1 | Lonsdalea populi |
| 151 | 580821 | 581084 | + | NZ_CP023009.1 | Lonsdalea britannica |
| 152 | 2204351 | 2204611 | - | NZ_CP026364.1 | Proteus hauseri |
| 153 | 24170 | 24430 | - | NC_010554.1 | Proteus mirabilis HI4320 |
| 154 | 4671734 | 4671997 | - | NZ_CP028271.1 | Mixta intestinalis |
| 155 | 897142 | 897402 | - | NZ_CP022355.1 | Paraphotobacterium marinum |
| 156 | 4565947 | 4566210 | + | NZ_CP014007.2 | Kosakonia oryzae |
| 157 | 2517607 | 2517867 | + | NZ_CP033065.1 | Pseudoalteromonas agarivorans |
| 158 | 1055442 | 1055702 | - | NZ_CP023464.1 | Pseudoalteromonas atlantica |
| 159 | 2649655 | 2649915 | + | NZ_CP011028.1 | Pseudoalteromonas espejiana DSM 9414 |
| 160 | 2814699 | 2814959 | + | NZ_CP029185.2 | Limnobaculum parvum |
| 161 | 806721 | 806984 | + | NZ_CP019706.1 | Pantoea alhagi |
| 162 | 765911 | 766174 | - | NZ_CP061511.1 | Mixta calida |
| 163 | 882234 | 882497 | - | NZ_CP026377.1 | Mixta gaviniae |
| 164 | 2345066 | 2345329 | + | NZ_CP045300.1 | Kosakonia arachidis |
| 165 | 3171772 | 3172032 | - | NZ_CP072133.1 | Pseudoalteromonas xiamenensis |
| 166 | 895737 | 896000 | - | NZ_CP015425.1 | [Haemophilus] ducreyi |
| 167 | 644828 | 645091 | - | NZ_LR134340.1 | Escherichia marmotae |
| 168 | 4209280 | 4209543 | + | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 169 | 664434 | 664697 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 170 | 617464 | 617727 | - | NZ_CP028926.1 | Pasteurella multocida |
| 171 | 2760489 | 2760749 | + | NZ_CP017689.1 | Thalassotalea crassostreae |
| 172 | 2585072 | 2585335 | + | NZ_CP009056.1 | Frischella perrara |
| 173 | 216710 | 216973 | + | NZ_CP015029.1 | Frederiksenia canicola |
| 174 | 731636 | 731899 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 175 | 3320945 | 3321208 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 176 | 2651303 | 2651566 | - | NZ_CP053416.1 | Salmonella bongori |
| 177 | 3139203 | 3139466 | + | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 178 | 52280 | 52543 | - | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 179 | 4403903 | 4404166 | + | NZ_LR134475.1 | Klebsiella aerogenes |
| 180 | 612654 | 612914 | - | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 181 | 740517 | 740780 | - | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 182 | 965730 | 965993 | - | NC_015554.1 | Alteromonas naphthalenivorans |
| 183 | 639870 | 640130 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 184 | 678111 | 678371 | - | NZ_LR134494.1 | Serratia quinivorans |
| 185 | 1069662 | 1069922 | - | NZ_CP011041.1 | Pseudoalteromonas tetraodonis |
| 186 | 1055824 | 1056084 | - | NZ_CP011030.1 | Pseudoalteromonas issachenkonii |
| 187 | 909936 | 910196 | - | NZ_CP011039.1 | Pseudoalteromonas spongiae UST010723-006 |
| 188 | 1628994 | 1629254 | - | NZ_CP009888.1 | Pseudoalteromonas piratica |
| 189 | 2080799 | 2081059 | + | NZ_CP031961.1 | Pseudoalteromonas tunicata |
| 190 | 1212378 | 1212638 | + | NC_006512.1 | Idiomarina loihiensis L2TR |
| 191 | 2109293 | 2109556 | - | NZ_CP006954.1 | Bibersteinia trehalosi USDA-ARS-USMARC-188 |
| 192 | 522004 | 522267 | - | NZ_CP015113.1 | Kosakonia radicincitans |
| 193 | 4504967 | 4505227 | + | NZ_CP019628.1 | Pseudoalteromonas aliena |
| 194 | 2646932 | 2647192 | + | NZ_CP027523.1 | Pseudoalteromonas carrageenovora |
| 195 | 3947827 | 3948093 | + | NC_011566.1 | Shewanella piezotolerans WP3 |
| 196 | 943127 | 943387 | - | NC_007481.1 | Pseudoalteromonas translucida |
| 197 | 1007171 | 1007431 | - | NZ_CP011036.1 | Pseudoalteromonas nigrifaciens |
| 198 | 2803083 | 2803343 | + | NZ_CP011025.1 | Pseudoalteromonas arctica A 37-1-2 |
| 199 | 3138214 | 3138477 | + | NZ_CP014322.1 | Alteromonas addita |
| 200 | 1163557 | 1163823 | - | NZ_CP022358.1 | Shewanella bicestrii |
| 201 | 2577864 | 2578127 | + | NC_021883.1 | Mannheimia haemolytica USMARC_2286 |
| 202 | 1366924 | 1367190 | - | NC_016901.1 | Shewanella baltica OS678 |
| 203 | 850107 | 850367 | - | NC_014541.1 | Ferrimonas balearica DSM 9799 |
| 204 | 3538956 | 3539219 | - | NZ_CP052766.1 | Alteromonas pelagimontana |
| 205 | 2983972 | 2984232 | + | NZ_CP031769.1 | Salinimonas sediminis |
| 206 | 2367584 | 2367847 | + | NZ_CP029347.1 | Saliniradius amylolyticus |
| 207 | 1419732 | 1419992 | - | NZ_CP036536.1 | Salinimonas lutimaris |
| 208 | 2882797 | 2883060 | + | NZ_CP067057.1 | Rahnella aceris |
| 209 | 1396523 | 1396783 | + | NZ_CP034759.1 | Litorilituus sediminis |
| 210 | 2431438 | 2431698 | + | NZ_CP032090.1 | Pseudoalteromonas donghaensis |
| 211 | 86494 | 86754 | - | NZ_CP051180.1 | Ferrimonas lipolytica |
| 212 | 636120 | 636383 | - | NZ_LR134376.1 | Aeromonas encheleia |
| 213 | 2782859 | 2783122 | + | NZ_CP051883.1 | Aeromonas salmonicida |
| 214 | 1167365 | 1167631 | - | NC_014012.1 | Shewanella violacea DSS12 |
| 215 | 10419 | 10682 | - | NZ_CP016180.1 | Pasteurella skyensis |
| 216 | 1417753 | 1418019 | - | NC_009831.1 | Shewanella sediminis HAW-EB3 |
| 217 | 341307 | 341570 | - | NZ_LT906463.1 | Haemophilus pittmaniae |
| 218 | 3241217 | 3241480 | + | NC_012691.1 | Tolumonas auensis DSM 9187 |
| 219 | 30272 | 30535 | - | NZ_CP009610.1 | Haemophilus influenzae |
| 220 | 716566 | 716829 | - | NZ_LS483458.1 | Haemophilus haemolyticus |
| 221 | 110128 | 110391 | + | NZ_LS483443.1 | Aggregatibacter segnis ATCC 33393 |
| 222 | 3851284 | 3851547 | - | NZ_CP044060.1 | Aeromonas veronii |
| 223 | 4100734 | 4100997 | - | NZ_CP065745.1 | Aeromonas allosaccharophila |
| 224 | 4131196 | 4131459 | + | NZ_AP022188.1 | Aeromonas media |
| 225 | 717250 | 717513 | - | NZ_CP050851.1 | Aeromonas hydrophila |
| 226 | 3846045 | 3846311 | + | NZ_CP034015.1 | Shewanella livingstonensis |
| 227 | 1859364 | 1859627 | + | NZ_CP016605.1 | Bisgaardia hudsonensis |
| 228 | 19770 | 20033 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 229 | 581465 | 581725 | - | NZ_CP012621.1 | Zobellella denitrificans |
| 230 | 3135340 | 3135606 | + | NZ_CP022272.1 | Shewanella marisflavi |
| 231 | 1263964 | 1264230 | - | NC_009092.1 | Shewanella loihica PV-4 |
| 232 | 2059104 | 2059367 | - | NZ_CP040863.1 | Rodentibacter heylii |
| 233 | 1826631 | 1826894 | + | NZ_CP030753.1 | Actinobacillus pleuropneumoniae |
| 234 | 1923735 | 1923998 | - | NZ_CP007715.1 | Actinobacillus equuli subsp. equuli |
| 235 | 1918446 | 1918709 | - | NZ_CP009159.1 | Actinobacillus suis ATCC 33415 |
| 236 | 2820619 | 2820882 | + | NZ_CP008849.1 | Alteromonas australica |
| 237 | 3349466 | 3349729 | + | NZ_CP040449.1 | Aeromonas simiae |
| 238 | 2829795 | 2830058 | + | NZ_CP046670.1 | Alteromonas mediterranea |
| 239 | 2341680 | 2341940 | + | NZ_CP040021.1 | Salinivibrio kushneri |
| 240 | 1886887 | 1887147 | - | NZ_CP014056.2 | Grimontia hollisae |
| 241 | 1633070 | 1633336 | - | NC_010506.1 | Shewanella woodyi ATCC 51908 |
| 242 | 1345551 | 1345814 | - | NC_020541.1 | Rhodanobacter denitrificans |
| 243 | 1362443 | 1362706 | + | NZ_CP015031.1 | Basfia succiniciproducens |
| 244 | 1750086 | 1750349 | + | NC_006300.1 | [Mannheimia] succiniciproducens MBEL55E |
| 245 | 2263160 | 2263420 | + | NZ_CP033078.1 | Vibrio zhugei |
| 246 | 2850960 | 2851220 | + | NZ_AP014635.1 | Vibrio tritonius |
| 247 | 1154344 | 1154604 | - | NC_016041.1 | Glaciecola nitratireducens FR1064 |
| 248 | 2461104 | 2461364 | - | NZ_CP046793.1 | Vibrio metschnikovii |
| 249 | 1307577 | 1307843 | - | NC_009901.1 | Shewanella pealeana ATCC 700345 |
| 250 | 1370832 | 1371098 | - | NC_010334.1 | Shewanella halifaxensis HAW-EB4 |
| 251 | 1893282 | 1893545 | + | NZ_AP018560.1 | Aerosticca soli |
| 252 | 1310295 | 1310561 | - | NZ_CP037951.1 | Parashewanella tropica |
| 253 | 306419 | 306682 | + | NZ_CP017480.1 | Luteibacter rhizovicinus DSM 16549 |
| 254 | 1303649 | 1303912 | + | NZ_CP014841.1 | Dyella thiooxydans |
| 255 | 1495430 | 1495693 | - | NZ_CP064030.1 | Dyella caseinilytica |
| 256 | 2787272 | 2787535 | + | NC_017033.1 | Frateuria aurantia DSM 6220 |
| 257 | 524841 | 525104 | + | NZ_CP037953.1 | Permianibacter aggregans |
| 258 | 3322750 | 3323013 | + | NZ_CP041046.1 | Luteibacter pinisoli |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP011254.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF06965.14 | 0.62 | 159 | 1057 | opposite-strand | Na+/H+ antiporter 1 |
| 2 | PF06574.14 | 0.92 | 237 | 414.0 | opposite-strand | FAD synthetase |
| 3 | PF01687.19 | 0.93 | 238 | 414 | opposite-strand | Riboflavin kinase |
| 4 | PF00133.24 | 0.92 | 237 | 1385.0 | opposite-strand | tRNA synthetases class I (I, L, M and V) |
| 5 | PF08264.15 | 0.92 | 236 | 1385 | opposite-strand | Anticodon-binding domain of tRNA ligase |
| 6 | PF06827.16 | 0.9 | 232 | 1385 | opposite-strand | Zinc finger found in FPG and IleRS |
| 7 | PF01252.20 | 0.9 | 231 | 4207.5 | opposite-strand | Signal peptidase (SPase) II |
++ More..