Result : A9CHM9
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Aminoacyl carrier protein |
| NCBI Accession ID | AE007869.2 |
| Organism | Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58)) |
| Left | 2542120 |
| Right | 2542371 |
| Strand | + |
| Nucleotide Sequence | ATGAATGCGACTATTCGTGAAATACTGGCAAAATTCGGCCAGCTTCCCACCCCCGTCGATACGATTGCAGATGAAGCAGATCTTTATGCGGCAGGCCTCTCTTCCTTCGCATCCGTACAACTGATGTTGGGTATCGAAGAAGCATTCGATATCGAATTCCCCGATAACCTGTTGAACCGCAAGTCTTTCGCCAGCATCAAGGCCATTGAAGACACCGTTAAGCTCATTCTGGATGGTAAAGAGGCTGCCTGA |
| Sequence | MNATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKLILDGKEAA |
| Source of smORF | Swiss-Prot |
| Function | Aminoacyl carrier protein. Can be charged with L-alanine, L-glycine or L-serine, via the formation of a thioester bond between the amino acid and the 4'-phosphopantetheinyl prosthetic group, catalyzed by the Atu2573 ligase. {ECO:0000269|Pubmed:20663952}. |
| Pubmed ID | 11743193 11743194 20663952 |
| Domain | CDD:415812 |
| Functional Category | Others |
| Uniprot ID | A9CHM9 |
| ORF Length (Amino Acid) | 83 |
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| Conservation Analysis |
No. of Species: 47
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 2194975 | 2195226 | + | NZ_CP053856.1 | Rhizobium pusense |
| 2 | 2303537 | 2303788 | + | NZ_CP061003.1 | Agrobacterium tumefaciens |
| 3 | 2536595 | 2536846 | - | NZ_CP048632.1 | Rhizobium oryzihabitans |
| 4 | 4368622 | 4368873 | - | NZ_CP032694.1 | Rhizobium jaguaris |
| 5 | 4268202 | 4268453 | + | NZ_CP071612.1 | Rhizobium bangladeshense |
| 6 | 4421912 | 4422163 | + | NZ_CP071604.1 | Rhizobium binae |
| 7 | 4197751 | 4198002 | + | NZ_CP020906.1 | Rhizobium etli |
| 8 | 4371839 | 4372090 | + | NZ_CP013500.1 | Rhizobium esperanzae |
| 9 | 3975963 | 3976214 | - | NZ_CP006877.1 | Rhizobium gallicum bv. gallicum R602sp |
| 10 | 1714573 | 1714824 | + | NZ_CP071454.1 | Rhizobium lentis |
| 11 | 3979550 | 3979801 | - | NZ_CP034998.1 | Rhizobium acidisoli |
| 12 | 3622402 | 3622653 | - | NC_020059.1 | Rhizobium tropici CIAT 899 |
| 13 | 4433061 | 4433312 | + | NZ_CP013532.1 | Rhizobium phaseoli |
| 14 | 138404 | 138655 | + | NZ_CP054027.1 | Rhizobium hidalgonense |
| 15 | 265935 | 266186 | + | NZ_CP006879.1 | Rhizobium gallicum bv. gallicum R602sp |
| 16 | 552706 | 552957 | - | NZ_CP034999.1 | Rhizobium acidisoli |
| 17 | 2850881 | 2851132 | + | NZ_CP054021.1 | Rhizobium indicum |
| 18 | 4865819 | 4866070 | - | NZ_CP071678.1 | Rhizobium ruizarguesonis |
| 19 | 357164 | 357415 | - | NZ_CP059896.1 | Ciceribacter thiooxidans |
| 20 | 1873784 | 1874035 | + | NZ_CP064063.1 | Brucella anthropi |
| 21 | 276215 | 276466 | + | NZ_CP071608.1 | Rhizobium binae |
| 22 | 1501583 | 1501834 | + | NZ_CP049241.1 | Rhizobium pseudoryzae |
| 23 | 4032708 | 4032959 | + | NZ_HG938353.1 | Neorhizobium galegae bv. orientalis str. HAMBI 540 |
| 24 | 3524084 | 3524323 | - | NZ_CP046908.1 | Stappia indica |
| 25 | 8416 | 8664 | - | NZ_CP049248.1 | Rhizobium rhizoryzae |
| 26 | 8692 | 8943 | - | NZ_CP054624.1 | Cupriavidus gilardii |
| 27 | 44234 | 44482 | + | NZ_CP029834.1 | Azospirillum ramasamyi |
| 28 | 137208 | 137459 | + | NZ_CP053708.1 | Lichenicola cladoniae |
| 29 | 1200972 | 1201223 | + | NZ_CP066075.1 | Paraburkholderia ginsengisoli |
| 30 | 364119 | 364367 | + | NZ_CP054620.1 | Azospirillum oryzae |
| 31 | 1114435 | 1114686 | + | NZ_CP039690.1 | Phreatobacter stygius |
| 32 | 1460588 | 1460839 | - | NZ_CP027668.1 | Phreatobacter cathodiphilus |
| 33 | 415726 | 415953 | - | NZ_CP012406.1 | Azospirillum thiophilum |
| 34 | 2141489 | 2141740 | - | NC_007951.1 | Paraburkholderia xenovorans LB400 |
| 35 | 3667759 | 3668010 | + | NZ_CP022989.1 | Paraburkholderia aromaticivorans |
| 36 | 2513361 | 2513606 | - | NZ_CP047650.1 | Xylophilus rhododendri |
| 37 | 4524465 | 4524683 | - | NZ_AP023172.1 | Rhodococcus qingshengii |
| 38 | 10755 | 11006 | + | NZ_CP062804.1 | Cupriavidus basilensis |
| 39 | 4634957 | 4635199 | - | NZ_CP024645.1 | Rhizobacter gummiphilus |
| 40 | 935166 | 935411 | - | NZ_CP042430.1 | Baekduia soli |
| 41 | 2052483 | 2052710 | - | NZ_CP029553.1 | Methylobacterium terrae |
| 42 | 184849 | 185103 | + | NC_010505.1 | Methylobacterium radiotolerans JCM 2831 |
| 43 | 5515936 | 5516190 | + | NZ_CP015367.1 | Methylobacterium phyllosphaerae |
| 44 | 184668 | 184922 | + | NZ_CP003811.1 | Methylobacterium oryzae CBMB20 |
| 45 | 1226277 | 1226528 | - | NZ_CP013403.1 | Burkholderia metallica |
| 46 | 1206048 | 1206299 | - | NZ_CP013461.1 | Burkholderia stagnalis |
| 47 | 1306836 | 1307087 | - | NZ_CP013400.1 | Burkholderia seminalis |
| 48 | 1397463 | 1397714 | - | NZ_CP013452.1 | Burkholderia cenocepacia |
| 49 | 1253674 | 1253925 | + | NZ_CP045236.1 | Burkholderia cepacia |
| 50 | 389265 | 389558 | + | NZ_CP029352.1 | Azospirillum thermophilum |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP053856.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF08893.12 | 1.0 | 47 | 2104.0 | same-strand | Domain of unknown function (DUF1839) |
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