ProsmORF-pred
Result : Q8D203
Protein Information
Information Type Description
Protein name 30S ribosomal protein S17
NCBI Accession ID BA000021.3
Organism Wigglesworthia glossinidia brevipalpis
Left 630537
Right 630815
Strand +
Nucleotide Sequence ATGAAGAAAAAAAAGGTAGAAATAATAATGGGTAAAAAAAAATTACAAATCTTAAAAGGAAGTGTGATAAAAAATAAAATGCAAAAATCAATTGTTGTATCAGTAGAAAGATTTGTAAAACATCCAATTTATAAAAAATTTATGAAGAAAACAACTAAATTGCATGTTCACGATGAAAATAACTCAAGCAAAGTAGGTGATGTTGTAGAAATACAAGAATGTAGACCTATTTCTAAAACAAAATCTTGGAAACTAATAAACATTAAAAAAAATAATTAA
Sequence MKKKKVEIIMGKKKLQILKGSVIKNKMQKSIVVSVERFVKHPIYKKFMKKTTKLHVHDENNSSKVGDVVEIQECRPISKTKSWKLINIKKNN
Source of smORF Swiss-Prot
Function One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. {ECO:0000255|HAMAP-Rule:MF_01345}.
Pubmed ID 12219091
Domain CDD:412327
Functional Category Ribosomal_protein
Uniprot ID Q8D203
ORF Length (Amino Acid) 92
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 516
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 711619 711873 - NZ_CP040428.1 Jejubacter calystegiae
2 1252559 1252813 - NZ_CP026047.1 Raoultella planticola
3 463950 464204 + NZ_CP046672.1 Raoultella ornithinolytica
4 483382 483636 + NZ_CP006569.1 Sodalis praecaptivus
5 455212 455466 + NC_012880.1 Musicola paradisiaca Ech703
6 380534 380788 + NC_012912.1 Dickeya chrysanthemi Ech1591
7 313675 313929 + NC_017910.1 Shimwellia blattae DSM 4481 = NBRC 105725
8 3799760 3800014 + NZ_CP027107.1 Cronobacter sakazakii
9 227017 227271 + NZ_CP013940.1 Cronobacter malonaticus LMG 23826
10 3886663 3886917 - NZ_CP012257.1 Cronobacter universalis NCTC 9529
11 3964018 3964272 - NZ_CP012264.1 Cronobacter condimenti 1330
12 80998 81252 + NZ_CP012268.1 Cronobacter muytjensii ATCC 51329
13 376517 376771 + NZ_CP061527.1 Shigella dysenteriae
14 4053907 4054161 - NZ_CP012266.1 Cronobacter dublinensis subsp. dublinensis LMG 23823
15 3951503 3951757 - NZ_LR134340.1 Escherichia marmotae
16 2369605 2369859 - NZ_CP057657.1 Escherichia fergusonii
17 3432697 3432951 - NC_004337.2 Shigella flexneri 2a str. 301
18 3448314 3448568 - NC_000913.3 Escherichia coli str. K-12 substr. MG1655
19 3424321 3424575 - NZ_AP014857.1 Escherichia albertii
20 4175962 4176216 - NZ_CP012871.1 [Enterobacter] lignolyticus
21 3318965 3319219 + NZ_CP009460.1 Dickeya fangzhongdai
22 981421 981675 + NZ_CP051548.1 Phytobacter diazotrophicus
23 4183454 4183708 - NC_002695.2 Escherichia coli O157:H7 str. Sakai
24 5142351 5142605 + NZ_CP011602.1 Phytobacter ursingii
25 319369 319623 + NZ_CP065534.1 Lonsdalea populi
26 746752 747006 - NZ_CP023009.1 Lonsdalea britannica
27 477261 477515 + NZ_CP042220.2 Dickeya poaceiphila
28 4043193 4043447 - NZ_LT615367.1 Dickeya aquatica
29 4186994 4187248 - NZ_CP025799.1 Dickeya zeae
30 4386900 4387154 - NC_014500.1 Dickeya dadantii 3937
31 424304 424558 + NZ_LN907827.1 Erwinia gerundensis
32 1115185 1115439 - NZ_CP065640.1 Serratia rubidaea
33 4232125 4232358 - NZ_CP038498.1 Pectobacterium punjabense
34 408424 408678 + NZ_CP035129.1 Kosakonia cowanii
35 4346682 4346936 - NC_009792.1 Citrobacter koseri ATCC BAA-895
36 3830669 3830923 + NZ_CP038469.1 Citrobacter tructae
37 2692899 2693153 - NZ_CP016337.1 Kosakonia sacchari
38 4442960 4443214 - NZ_CP063425.1 Kosakonia pseudosacchari
39 2832283 2832537 + NZ_CP044098.1 Citrobacter portucalensis
40 2250336 2250590 - NZ_CP033744.1 Citrobacter freundii
41 3561706 3561960 + NZ_CP045300.1 Kosakonia arachidis
42 454045 454299 + NZ_CP014007.2 Kosakonia oryzae
43 4869941 4870195 - NZ_CP015113.1 Kosakonia radicincitans
44 3612026 3612280 - NZ_CP034148.1 Pantoea agglomerans
45 459284 459538 + NZ_CP045720.1 Pantoea eucalypti
46 469420 469674 + NZ_CP038853.1 Pantoea vagans
47 1185517 1185771 - NZ_CP019706.1 Pantoea alhagi
48 405668 405922 + NZ_CP061511.1 Mixta calida
49 480285 480539 + NZ_CP026377.1 Mixta gaviniae
50 2445926 2446180 - NZ_CP049115.1 Pantoea stewartii
51 459806 460060 + NC_017554.1 Pantoea ananatis PA13
52 4229250 4229504 + NZ_CP028271.1 Mixta intestinalis
53 1441712 1441966 - NZ_CP053416.1 Salmonella bongori
54 3591581 3591835 - NC_003197.2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
55 303683 303907 + NZ_CP031416.1 Gallaecimonas mangrovi
56 4737648 4737881 + NZ_CP015749.1 Pectobacterium parmentieri
57 1133750 1133983 - NZ_CP015750.1 Pectobacterium wasabiae CFBP 3304
58 489416 489670 + NZ_CP034036.1 Brenneria nigrifluens DSM 30175 = ATCC 13028
59 4032816 4033070 + NZ_CP067057.1 Rahnella aceris
60 153085 153339 + NZ_CP034035.1 Brenneria rubrifaciens
61 4423783 4424037 - NZ_CP031560.1 Dickeya dianthicola
62 1643606 1643860 - NZ_CP015137.1 Dickeya solani IPO 2222
63 522407 522661 + NZ_CP065044.1 Pectobacterium aroidearum
64 4801192 4801446 + NZ_CP014137.1 Brenneria goodwinii
65 425611 425865 + NZ_CP041247.1 Raoultella electrica
66 427178 427432 + NZ_CP050508.1 Raoultella terrigena
67 3478111 3478365 - NC_012779.2 Edwardsiella ictaluri 93-146
68 1416608 1416862 - NZ_CP006664.1 Edwardsiella anguillarum ET080813
69 4402026 4402280 - NZ_CP009125.1 Pectobacterium atrosepticum
70 2014518 2014772 + NZ_CP023706.1 Edwardsiella tarda
71 287479 287733 + NZ_CP016043.1 Edwardsiella hoshinae
72 200975 201229 - NC_016893.1 Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)
73 396039 396293 + NZ_AP023184.1 Buttiauxella agrestis
74 240969 241223 + NZ_LR134201.1 Cedecea lapagei
75 236447 236701 + NZ_CP023525.1 Cedecea neteri
76 2118496 2118750 + NZ_CP042941.1 Atlantibacter hermannii
77 1657566 1657820 + NZ_LT556085.1 Citrobacter amalonaticus
78 428843 429097 + NZ_LR134475.1 Klebsiella aerogenes
79 4761886 4762140 + NC_013716.1 Citrobacter rodentium ICC168
80 1182466 1182720 + NZ_CP020388.1 Pluralibacter gergoviae
81 24745 24999 - NZ_CP045205.1 Citrobacter telavivensis
82 434573 434827 + NZ_CP054254.1 Klebsiella variicola
83 507724 507978 + NZ_CP060111.1 Klebsiella michiganensis
84 2993417 2993671 - NZ_CP023529.1 Lelliottia amnigena
85 2139579 2139833 + NZ_CP047495.1 Pectobacterium brasiliense
86 481358 481612 + NZ_CP051652.1 Pectobacterium carotovorum
87 3205369 3205623 - NZ_CP017482.1 Pectobacterium polaris
88 4392564 4392818 - NZ_CP034938.1 Pectobacterium odoriferum
89 4054685 4054939 + NZ_CP045769.1 Enterobacter cancerogenus
90 313607 313855 + NC_014541.1 Ferrimonas balearica DSM 9799
91 3824111 3824371 - NZ_CP012621.1 Zobellella denitrificans
92 3481489 3481743 - NC_013961.1 Erwinia amylovora CFBP1430
93 3528128 3528382 - NC_010694.1 Erwinia tasmaniensis Et1/99
94 317101 317355 + NZ_CP023567.1 Erwinia pyrifoliae
95 4806427 4806681 - NZ_LT906479.1 Serratia ficaria
96 108233 108487 + NZ_CP015581.1 Tatumella citrea
97 1314985 1315239 - NZ_CP011254.1 Serratia fonticola
98 3007617 3007871 + NZ_CP009781.1 Yersinia aldovae 670-83
99 340384 340638 + NZ_CP071320.1 Serratia ureilytica
100 4070248 4070502 - NZ_CP016948.1 Serratia surfactantfaciens
101 4842150 4842404 - NZ_CP038662.1 Serratia nematodiphila
102 4254949 4255203 - NZ_CP050150.1 Hafnia alvei
103 373429 373683 + NZ_LS483470.1 Leminorella richardii
104 1568210 1568464 + NZ_CP054043.1 Yersinia mollaretii ATCC 43969
105 311928 312182 + NZ_LR134373.1 Yersinia pseudotuberculosis
106 4364331 4364585 - NZ_CP043727.1 Yersinia canariae
107 336561 336815 + NZ_CP011118.1 Yersinia enterocolitica
108 4378437 4378691 - NZ_CP032487.1 Yersinia hibernica
109 1264054 1264308 - NZ_CP007230.1 Yersinia similis
110 140990 141244 + NZ_CP046293.1 Yersinia intermedia
111 4892898 4893152 - NZ_CP048784.1 Serratia liquefaciens
112 1386366 1386620 + NZ_CP007044.2 Chania multitudinisentens RB-25
113 3112144 3112398 - NZ_AP014635.1 Vibrio tritonius
114 461719 461973 + NZ_CP045845.1 Kluyvera intermedia
115 309090 309344 + NZ_LR134531.1 Pragia fontium
116 524521 524757 - NC_004545.1 Buchnera aphidicola str. Bp (Baizongia pistaciae)
117 2024879 2025133 - NZ_AP019007.1 Enterobacter oligotrophicus
118 4199040 4199294 - NZ_AP022508.1 Enterobacter bugandensis
119 4273027 4273281 - NZ_CP027986.1 Enterobacter sichuanensis
120 4291963 4292217 - NZ_CP017184.1 Enterobacter roggenkampii
121 449850 450104 + NZ_CP013990.1 Leclercia adecarboxylata
122 4306430 4306684 - NC_015968.1 Enterobacter soli
123 3007607 3007861 + NZ_CP025034.2 Enterobacter sp. SGAir0187
124 4395977 4396231 - NZ_CP009756.1 Enterobacter cloacae
125 2854524 2854778 - NZ_CP017279.1 Enterobacter ludwigii
126 4628080 4628334 - NZ_CP043318.1 Enterobacter chengduensis
127 2903296 2903550 + NZ_CP014136.1 Gibbsiella quercinecans
128 3330533 3330787 - NZ_CP029185.2 Limnobaculum parvum
129 4143397 4143651 - NZ_CP034752.1 Jinshanibacter zhutongyuii
130 3588769 3589017 - NZ_CP040449.1 Aeromonas simiae
131 2217958 2218215 + NZ_CP072133.1 Pseudoalteromonas xiamenensis
132 425038 425292 + NZ_CP065838.1 Klebsiella quasipneumoniae
133 4865940 4866194 - NC_016845.1 Klebsiella pneumoniae subsp. pneumoniae HS11286
134 392369 392623 + NZ_CP054058.1 Scandinavium goeteborgense
135 546873 547127 + NZ_CP036175.1 Klebsiella huaxiensis
136 2055862 2056086 - NZ_CP006944.1 Mannheimia varigena USDA-ARS-USMARC-1312
137 538907 539131 + NZ_CP061280.1 Mannheimia bovis
138 248606 248863 + NZ_CP032090.1 Pseudoalteromonas donghaensis
139 2545533 2545787 - NZ_CP033078.1 Vibrio zhugei
140 2042712 2042972 + NZ_CP021377.1 Oceanisphaera profunda
141 2473666 2473926 + NZ_CP021376.1 Oceanisphaera avium
142 19496 19756 + NZ_CP016180.1 Pasteurella skyensis
143 4586403 4586657 - NC_014306.1 Erwinia billingiae Eb661
144 3819381 3819629 + NZ_CP051883.1 Aeromonas salmonicida
145 237460 237711 + NZ_CP028897.1 Dongshaea marina
146 1967197 1967454 - NZ_CP016604.1 Otariodibacter oris
147 905374 905628 + NZ_CP015425.1 [Haemophilus] ducreyi
148 167485 167742 + NZ_CP011041.1 Pseudoalteromonas tetraodonis
149 172430 172687 + NZ_CP011030.1 Pseudoalteromonas issachenkonii
150 2323683 2323934 + NZ_CP041660.1 Catenovulum sediminis
151 1194109 1194363 + NZ_CP023536.1 Providencia alcalifaciens
152 3564409 3564663 - NZ_CP031123.2 Providencia huaxiensis
153 205575 205832 - NZ_CP009610.1 Haemophilus influenzae
154 301204 301461 - NZ_LS483458.1 Haemophilus haemolyticus
155 215869 216126 - NZ_LS483429.1 Haemophilus aegyptius
156 1823628 1823885 + NZ_CP040863.1 Rodentibacter heylii
157 616988 617224 + NZ_LS483443.1 Aggregatibacter segnis ATCC 33393
158 1192202 1192438 - NZ_LR134327.1 Aggregatibacter aphrophilus ATCC 33389
159 409986 410243 - NZ_LT906463.1 Haemophilus pittmaniae
160 180757 181014 + NZ_CP033065.1 Pseudoalteromonas agarivorans
161 183715 183972 + NZ_CP023464.1 Pseudoalteromonas atlantica
162 2096121 2096357 - NZ_CP016605.1 Bisgaardia hudsonensis
163 3540664 3540921 - NZ_CP011025.1 Pseudoalteromonas arctica A 37-1-2
164 2069721 2069978 + NZ_CP019628.1 Pseudoalteromonas aliena
165 2171621 2171875 + NZ_CP046793.1 Vibrio metschnikovii
166 4295753 4296001 - NZ_LR134376.1 Aeromonas encheleia
167 2985914 2986162 - NZ_CP044060.1 Aeromonas veronii
168 4452718 4452966 - NZ_AP022188.1 Aeromonas media
169 331938 332186 + NZ_CP050851.1 Aeromonas hydrophila
170 1088752 1088988 + NZ_CP028926.1 Pasteurella multocida
171 3426054 3426311 - NZ_CP027523.1 Pseudoalteromonas carrageenovora
172 179519 179776 + NZ_CP011028.1 Pseudoalteromonas espejiana DSM 9414
173 4102234 4102488 - NZ_LS483422.1 Providencia heimbachae
174 3486224 3486478 - NZ_FO704551.1 Xenorhabdus poinarii G6
175 275911 276165 + NZ_FO704550.1 Xenorhabdus doucetiae
176 130642 130875 - NZ_LR134167.1 Avibacterium volantium
177 2719013 2719249 - NZ_CP029347.1 Saliniradius amylolyticus
178 368262 368495 + NC_011312.1 Aliivibrio salmonicida LFI1238
179 4062326 4062580 - NC_013892.1 Xenorhabdus bovienii SS-2004
180 4096649 4096903 - NZ_CP048796.1 Providencia vermicola
181 974249 974503 + NZ_CP029736.1 Providencia rettgeri
182 2014294 2014530 + NZ_LT906448.1 Pasteurella dagmatis
183 3161093 3161347 - NZ_CP016176.1 Xenorhabdus hominickii
184 3165562 3165816 - NZ_CP060401.1 Xenorhabdus nematophila
185 4192195 4192449 - NZ_CP072455.1 Xenorhabdus budapestensis
186 1681748 1682002 - NZ_CP011104.1 Photorhabdus thracensis
187 5493585 5493818 - NC_005126.1 Photorhabdus laumondii subsp. laumondii TTO1
188 157268 157528 + NZ_CP007445.1 Gilliamella apicola
189 1021712 1021969 + NZ_LR134510.1 Actinobacillus delphinicola
190 290861 291118 + NZ_CP031769.1 Salinimonas sediminis
191 3242227 3242475 - NZ_CP065745.1 Aeromonas allosaccharophila
192 1708389 1708643 + NZ_CP026364.1 Proteus hauseri
193 139030 139284 + NZ_CP047349.1 Proteus terrae subsp. cibarius
194 303461 303718 + NZ_CP046670.1 Alteromonas mediterranea
195 697911 698165 + NZ_CP029206.1 Actinobacillus porcitonsillarum
196 168422 168676 + NZ_CP006954.1 Bibersteinia trehalosi USDA-ARS-USMARC-188
197 253947 254189 + NZ_CP011039.1 Pseudoalteromonas spongiae UST010723-006
198 965624 965869 + NZ_CP009888.1 Pseudoalteromonas piratica
199 3587099 3587353 + NC_010554.1 Proteus mirabilis HI4320
200 4338216 4338467 - NC_008709.1 Psychromonas ingrahamii 37
201 3434556 3434810 + NZ_CP031961.1 Pseudoalteromonas tunicata
202 3096483 3096737 + NZ_CP014035.2 Vibrio fluvialis
203 2939414 2939647 - NZ_LT960611.1 Vibrio tapetis subsp. tapetis
204 1593856 1594110 + NC_011852.1 Glaesserella parasuis SH0165
205 2043076 2043330 + NZ_CP030753.1 Actinobacillus pleuropneumoniae
206 4872507 4872761 - NC_012962.1 Photorhabdus asymbiotica
207 2277872 2278126 - NZ_CP035688.1 Vibrio metoecus
208 2620118 2620372 - NZ_AP014524.1 Vibrio cholerae MS6
209 588405 588662 + NZ_CP015029.1 Frederiksenia canicola
210 1917662 1917916 - NZ_CP007715.1 Actinobacillus equuli subsp. equuli
211 1912364 1912618 - NZ_CP009159.1 Actinobacillus suis ATCC 33415
212 971762 972016 - NZ_CP014056.2 Grimontia hollisae
213 454469 454726 + NZ_CP008849.1 Alteromonas australica
214 121096 121350 - NZ_CP040990.1 Vibrio furnissii
215 1512225 1512482 + NZ_CP072425.1 Pseudoalteromonas viridis
216 1659998 1660231 - NZ_CP052766.1 Alteromonas pelagimontana
217 226768 226995 + NZ_CP069213.1 Shewanella litorisediminis
218 4415757 4415984 + NZ_CP020373.1 Shewanella khirikhana
219 3586786 3587043 - NZ_CP013187.1 Pseudoalteromonas phenolica
220 1603939 1604175 - NZ_CP015031.1 Basfia succiniciproducens
221 2001572 2001808 - NC_006300.1 [Mannheimia] succiniciproducens MBEL55E
222 256610 256837 + NC_008700.1 Shewanella amazonensis SB2B
223 409147 409401 + NZ_CP044069.1 Vibrio vulnificus
224 160952 161209 + NC_007481.1 Pseudoalteromonas translucida
225 161824 162081 + NZ_CP011036.1 Pseudoalteromonas nigrifaciens
226 418220 418453 + NZ_CP014322.1 Alteromonas addita
227 3728281 3728514 - NC_015554.1 Alteromonas naphthalenivorans
228 2461839 2462093 - NZ_CP022741.1 Vibrio qinghaiensis
229 172628 172855 + NZ_CP022272.1 Shewanella marisflavi
230 183936 184163 + NC_009092.1 Shewanella loihica PV-4
231 1967703 1967963 + NZ_CP018139.1 Halomonas aestuarii
232 2096029 2096256 + NC_011566.1 Shewanella piezotolerans WP3
233 5651560 5651787 - NC_010506.1 Shewanella woodyi ATCC 51908
234 6340485 6340730 - NC_007645.1 Hahella chejuensis KCTC 2396
235 610925 611179 + NZ_CP005974.1 Photobacterium gaetbulicola Gung47
236 808875 809162 + NZ_CP043042.1 Marinobacter fonticola
237 87979 88233 + NZ_CP018804.1 Histophilus somni
238 2126524 2126781 - NZ_CP012418.1 Kangiella sediminilitoris
239 4013519 4013767 - NZ_CP037951.1 Parashewanella tropica
240 132649 132909 + NZ_CP014226.1 Halomonas chromatireducens
241 457391 457645 - NZ_CP022355.1 Paraphotobacterium marinum
242 407785 408012 + NZ_CP014782.1 Shewanella psychrophila
243 419480 419737 + NZ_CP049916.1 Acinetobacter lanii
244 390818 391084 + NC_017506.1 Marinobacter adhaerens HP15
245 4750024 4750251 - NC_014012.1 Shewanella violacea DSS12
246 4677479 4677706 - NZ_CP046378.1 Shewanella algae
247 3845958 3846215 - NZ_CP036536.1 Salinimonas lutimaris
248 347502 347756 + NZ_CP047475.1 Vibrio astriarenae
249 5279907 5280134 - NC_009831.1 Shewanella sediminis HAW-EB3
250 3789258 3789545 - NZ_CP020931.1 Marinobacter salarius
251 411981 412238 + NZ_CP044483.1 Acinetobacter schindleri
252 2362078 2362335 - NZ_CP045650.1 Acinetobacter wanghuae
253 255418 255672 + NZ_CP009354.1 Vibrio tubiashii ATCC 19109
254 2619015 2619242 + NZ_CP036200.1 Shewanella maritima
255 334331 334585 - NZ_CP046531.1 Mannheimia ovis
256 362833 363087 - NZ_CP055305.1 Mannheimia pernigra
257 369693 369959 + NZ_CP051183.1 Bermanella marisrubri
258 497989 498246 + NZ_CP035934.2 Acinetobacter cumulans
259 252801 253028 + NC_016901.1 Shewanella baltica OS678
260 4148806 4149063 - NZ_AP014630.1 Acinetobacter guillouiae
261 2673762 2674049 - NZ_CP017715.1 Marinobacter salinus
262 3931766 3932026 - NZ_CP065435.1 Halomonas sp. SS10-MC5
263 242059 242286 + NZ_CP022358.1 Shewanella bicestrii
264 270362 270616 + NZ_CP071325.1 Photobacterium ganghwense
265 2117807 2118064 - NZ_CP010975.1 Kangiella geojedonensis
266 472117 472374 + NZ_CP016895.1 Acinetobacter larvae
267 196727 196984 - NZ_CP071766.1 Acinetobacter towneri
268 620908 621132 + NZ_CP031093.1 Hydrocarboniclastica marina
269 215138 215365 + NC_009901.1 Shewanella pealeana ATCC 700345
270 476009 476266 + NZ_CP049801.1 Acinetobacter shaoyimingii
271 1174769 1175029 - NZ_CP023559.1 Salinicola tamaricis
272 3144640 3144897 - NZ_CP032134.1 Acinetobacter chinensis
273 111652 111909 - NZ_CP072844.1 Psychrosphaera aestuarii
274 209901 210161 + NZ_AP022843.1 Halomonas hydrothermalis
275 209362 209622 + NZ_CP065135.1 Halomonas venusta
276 5020143 5020370 - NC_010334.1 Shewanella halifaxensis HAW-EB4
277 127698 127946 + NC_012691.1 Tolumonas auensis DSM 9187
278 422085 422336 + NC_016041.1 Glaciecola nitratireducens FR1064
279 201027 201254 + NC_007954.1 Shewanella denitrificans OS217
280 215470 215730 + NZ_CP048602.1 Halomonas piezotolerans
281 306683 306937 + NZ_CP040021.1 Salinivibrio kushneri
282 492893 493150 - NZ_CP012808.1 Acinetobacter equi
283 414436 414693 + NZ_CP025120.1 Kangiella profundi
284 4742036 4742263 - NZ_CP020472.1 Shewanella japonica
285 2476727 2476984 + NZ_CP040105.1 Acinetobacter nosocomialis M2
286 2394061 2394318 + NZ_CP070518.1 Acinetobacter calcoaceticus
287 442171 442428 + NZ_CP015121.1 Acinetobacter baumannii
288 476389 476646 + NZ_CP065820.1 Acinetobacter seifertii
289 458573 458830 + NC_014259.1 Acinetobacter oleivorans DR1
290 5172388 5172633 - NZ_CP020038.1 Agarilytica rhodophyticola
291 289131 289391 + NC_014532.2 Halomonas elongata DSM 2581
292 427472 427699 + NZ_CP034015.1 Shewanella livingstonensis
293 468487 468744 + NC_013166.1 Kangiella koreensis DSM 16069
294 5303364 5303591 - NZ_CP037952.1 Parashewanella spongiae
295 4434559 4434786 - NZ_CP041036.1 Shewanella polaris
296 175274 175501 + NC_008345.1 Shewanella frigidimarina NCIMB 400
297 2726803 2727060 - NC_016603.1 Acinetobacter pittii PHEA-2
298 447188 447445 + NZ_CP053391.1 Acinetobacter lactucae
299 547480 547740 + NZ_CP031415.1 Saccharospirillum mangrovi
300 580194 580454 + NZ_CP068345.1 Succinivibrio dextrinosolvens
301 983531 983791 - NZ_CP048812.1 Halomonas socia
302 6025592 6025852 - NZ_CP007142.1 Gynuella sunshinyii YC6258
303 581201 581434 + NZ_AP021888.1 Thiosulfativibrio zosterae
304 331084 331344 + NZ_AP018933.1 Zymobacter palmae
305 761489 761755 - NZ_CP021323.1 Kushneria konosiri
306 2537746 2538012 + NZ_CP021358.1 Kushneria marisflavi
307 726678 726914 + NZ_CP011494.1 Marinobacter psychrophilus
308 548745 549002 + NZ_CP029397.2 Acinetobacter defluvii
309 3639204 3639464 - NZ_CP021435.1 Halomonas beimenensis
310 454670 454927 + NZ_CP024632.1 Acinetobacter junii
311 1496103 1496378 - NZ_CP011390.1 Flavisolibacter tropicus
312 408145 408402 + NZ_CP030880.1 Acinetobacter haemolyticus
313 3535303 3535560 + NZ_CP041970.1 Acinetobacter dispersus
314 1813953 1814186 - NZ_CP026328.2 Acidithiobacillus caldus
315 3130059 3130316 - NC_005966.1 Acinetobacter baylyi ADP1
316 519649 519909 - NZ_CP042382.1 Pistricoccus aurantiacus
317 4576406 4576672 + NC_018012.1 Thiocystis violascens DSM 198
318 2467080 2467340 + NC_013960.1 Nitrosococcus halophilus Nc 4
319 1586071 1586337 - NZ_CP039268.1 Thermochromatium tepidum ATCC 43061
320 4762659 4762925 - NC_002516.2 Pseudomonas aeruginosa PAO1
321 2205171 2205422 + NZ_CP020465.1 Cognaticolwellia beringensis
322 3858898 3859161 - NC_016112.1 Methylotuvimicrobium alcaliphilum 20Z
323 641208 641447 + NZ_AP018724.1 Sulfurivermis fontis
324 2048074 2048337 - NC_006512.1 Idiomarina loihiensis L2TR
325 2896433 2896657 + NZ_CP029822.1 Entomomonas moraniae
326 458353 458586 + NZ_CP033040.1 Thiomicrorhabdus indica
327 4174948 4175172 + NZ_CP009533.1 Pseudomonas rhizosphaerae
328 1895990 1896250 + NZ_CP038033.1 Nitrosococcus wardiae
329 5811314 5811556 - NC_016609.1 Niastella koreensis GR20-10
330 1991796 1992056 - NZ_CP034759.1 Litorilituus sediminis
331 771588 771854 + NZ_LR215729.2 Pseudomonas marincola
332 510652 510903 + NZ_CP010427.1 Allofrancisella guangzhouensis
333 383383 383616 + NZ_AP020335.1 Hydrogenovibrio marinus
334 2907769 2908035 - NZ_CP031146.1 Pseudomonas plecoglossicida
335 520745 521011 + NC_008027.1 Pseudomonas entomophila L48
336 715735 716001 + NZ_AP022642.1 Pseudomonas otitidis
337 832931 833194 + NZ_CP035467.1 Methylotuvimicrobium buryatense
338 5314857 5315123 - NZ_CP007039.1 Pseudomonas cichorii JBC1
339 5319746 5320012 - NZ_CP068034.2 Pseudomonas syringae
340 513613 513879 + NZ_CP067022.1 Pseudomonas cannabina pv. alisalensis
341 5397932 5398198 - NZ_CP042804.1 Pseudomonas amygdali pv. tabaci str. ATCC 11528
342 696227 696493 + NC_004578.1 Pseudomonas syringae pv. tomato str. DC3000
343 5179748 5180014 - NZ_CP024159.1 Pseudomonas mosselii
344 612713 612979 + NZ_CP022562.1 Pseudomonas monteilii
345 5659217 5659483 + NZ_CP009365.1 Pseudomonas soli
346 491426 491674 + NZ_CP017689.1 Thalassotalea crassostreae
347 580795 581061 + NC_021505.1 Pseudomonas putida NBRC 14164
348 5056718 5056984 + NZ_CP012676.1 Pseudomonas versuta
349 5853165 5853431 - NZ_CP027756.1 Pseudomonas synxantha
350 4131481 4131726 + NZ_CP044399.1 Moritella marina ATCC 15381
351 922684 922944 - NC_008789.1 Halorhodospira halophila SL1
352 5319284 5319550 - NZ_CP054205.1 Pseudomonas rhodesiae
353 5250141 5250407 - NZ_CP027723.1 Pseudomonas orientalis
354 5440731 5440997 - NZ_CP023272.1 Pseudomonas lurida
355 5478670 5478936 - NZ_CP010896.1 Pseudomonas simiae
356 6011721 6011987 - NZ_CP035088.1 Pseudomonas viciae
357 6208344 6208610 - NZ_CP051487.1 Pseudomonas umsongensis
358 4619614 4619880 + NZ_CP005960.1 Pseudomonas mandelii JR-1
359 6137251 6137517 - NZ_CP014870.1 Pseudomonas silesiensis
360 6184556 6184822 - NZ_CP018420.1 Pseudomonas veronii
361 439951 440217 + NZ_CP012400.2 Pseudomonas yamanorum
362 2868095 2868340 - NZ_LS483250.1 Moritella yayanosii
363 1042421 1042693 + NZ_CP060009.1 Pseudomonas sediminis
364 1468963 1469235 - NZ_CP070505.1 Pseudomonas toyotomiensis
365 627162 627428 + NZ_CP062158.2 Pseudomonas lundensis
366 1242021 1242287 + NZ_CP049044.1 Pseudomonas psychrophila
367 804109 804375 + NZ_CP070503.1 Pseudomonas atacamensis
368 2869861 2870127 - NZ_CP014262.1 Pseudomonas corrugata
369 5640692 5640958 - NZ_CP029608.1 Pseudomonas kribbensis
370 6005792 6006058 - NZ_CP014205.2 Pseudomonas glycinae
371 5847341 5847607 - NZ_CP062253.1 Pseudomonas gozinkensis
372 5856841 5857107 - NZ_CP062252.1 Pseudomonas allokribbensis
373 4900966 4901232 + NZ_CP048810.1 Pseudomonas bijieensis
374 6059328 6059594 - NZ_CP034725.1 Pseudomonas brassicacearum
375 6118815 6119081 - NZ_CP061079.1 Pseudomonas chlororaphis
376 6150887 6151153 - NZ_LS999205.1 Pseudomonas protegens CHA0
377 3956459 3956725 - NZ_CP011835.1 Azotobacter chroococcum
378 3419852 3420118 + NZ_CP045302.1 Azotobacter salinestris
379 611544 611810 + NC_012560.1 Azotobacter vinelandii DJ
380 1249408 1249656 + NC_007912.1 Saccharophagus degradans 2-40
381 1928765 1929028 - NZ_CP045871.1 Litoricola lipolytica
382 5194599 5194865 - NZ_CP071706.1 Pseudomonas donghuensis
383 2059382 2059609 - NC_002932.3 Chlorobaculum tepidum TLS
384 5765223 5765489 - NZ_CP056030.1 Pseudomonas eucalypticola
385 599032 599295 + NZ_CP014864.1 Microbulbifer thermotolerans
386 272680 272913 + NC_023029.1 Francisella orientalis LADL--07-285A
387 233936 234169 + NZ_CP022375.1 Francisella opportunistica
388 878843 879094 - NC_003910.7 Colwellia psychrerythraea 34H
389 629452 629718 + NZ_CP043311.1 Pseudomonas lalkuanensis
390 626955 627221 + NZ_AP014862.1 Pseudomonas furukawaii
391 691960 692226 + NZ_CP046621.1 Pseudomonas alkylphenolica
392 3513558 3513821 - NZ_CP019650.1 Microbulbifer agarilyticus
393 742389 742661 + NZ_CP013124.1 Pseudomonas mendocina S5.2
394 4573542 4573814 - NZ_CP068551.1 Pseudomonas khazarica
395 970200 970427 + NC_013501.1 Rhodothermus marinus DSM 4252
396 1959551 1959805 - NZ_CP009170.1 Thermoanaerobacter kivui
397 1551942 1552193 - NZ_CP038241.1 Allofrancisella inopinata
398 1939321 1939575 - NC_014209.1 Thermoanaerobacter mathranii subsp. mathranii str. A3
399 2006648 2006902 - NC_013921.1 Thermoanaerobacter italicus Ab9
400 1673314 1673550 + NZ_CP031252.1 Neisseria elongata
401 2012963 2013229 - NC_018868.3 Simiduia agarivorans SA1 = DSM 21679
402 2675072 2675338 - NC_013851.1 Allochromatium vinosum DSM 180
403 2623129 2623392 + NZ_CP060711.1 Thermomonas brevis
404 258287 258535 + NZ_CP060084.1 Teredinibacter haidensis
405 1577403 1577666 + NZ_CP014143.1 Microbulbifer aggregans
406 4413410 4413676 - NZ_CP060092.1 Teredinibacter purpureus
407 3442295 3442558 - NZ_CP047491.1 Microbulbifer hydrolyticus
408 440063 440323 + NZ_CP054020.1 Thiomicrorhabdus xiamenensis
409 449929 450162 + NZ_CP035033.1 Hydrogenovibrio thermophilus
410 480472 480738 + NZ_LR699119.1 Aquicella siphonis
411 2213120 2213383 + NZ_CP058952.1 Chitinibacter fontanus
412 143079 143312 - NZ_CP009654.1 Francisella frigiditurris
413 2673624 2673851 - NZ_CP017305.1 Chlorobaculum limnaeum
414 2251342 2251566 - NZ_CP046415.1 Guyparkeria halophila
415 725536 725778 - NC_015707.1 Pseudothermotoga thermarum DSM 5069
416 2289817 2290071 - NC_015958.1 Thermoanaerobacter wiegelii Rt8.B1
417 419118 419372 + NC_014964.1 Thermoanaerobacter brockii subsp. finnii Ako-1
418 4877740 4877976 - NZ_CP015839.1 Marinobacterium aestuarii
419 194558 194785 + NC_011027.1 Chlorobaculum parvum NCIB 8327
420 236102 236335 + NC_017449.1 Francisella hispaniensis
421 363841 364065 + NZ_AP018722.1 Thiomicrorhabdus aquaedulcis
422 1956468 1956692 - NZ_CP072524.1 Neisseria sicca
423 289487 289711 - NZ_CP059563.1 Conchiformibius steedae
424 1701847 1702119 - NZ_CP011381.2 Moraxella bovoculi
425 1798340 1798612 - NZ_CP011158.1 Moraxella ovis
426 171994 172257 + NZ_CP007030.1 Thiomicrospira aerophila AL3
427 132428 132685 + NC_014377.1 Thermosediminibacter oceani DSM 16646
428 2657292 2657528 - NZ_CP030241.1 Moraxella bovis
429 2656833 2657111 - NZ_CP013189.1 Pseudohongiella spirulinae
430 241829 242062 + NC_015696.1 Francisella salina
431 1551945 1552178 - NZ_CP043552.1 Francisella marina
432 255739 255972 + NZ_CP016796.1 Francisella uliginis
433 636907 637161 + NZ_CP009761.1 Parvimonas micra
434 1937181 1937435 - NZ_CP068564.1 Keratinibaculum paraultunense
435 1388362 1388625 + NZ_CP021106.3 Nitrosospira lacus
436 1187047 1187280 - NZ_CP012505.1 Francisella persica ATCC VR-331
437 1200069 1200305 + NZ_CP059565.1 Neisseria wadsworthii
438 4222366 4222629 - NC_015572.1 Methylomonas methanica MC09
439 380335 380571 + NZ_CP065728.1 Moraxella nonliquefaciens
440 550408 550671 + NZ_CP043929.1 Methylomonas rhizoryzae
441 366609 366842 + NZ_CP040602.1 Thiomicrorhabdus sediminis
442 689267 689533 + NZ_CP053627.1 Xylella taiwanensis
443 2171098 2171352 - NC_003869.1 Caldanaerobacter subterraneus subsp. tengcongensis MB4
444 433967 434209 + NC_014410.1 Thermoanaerobacterium thermosaccharolyticum DSM 571
445 1555829 1556101 - NC_014147.1 Moraxella catarrhalis BBH18
446 146757 147011 + NZ_CP007452.1 Peptoclostridium acidaminophilum DSM 3953
447 426536 426769 + NZ_CP022132.1 Francisella halioticida
448 2377717 2377953 - NZ_CP007446.1 Snodgrassella alvi wkB2
449 357780 358022 + NC_015555.1 Thermoanaerobacterium xylanolyticum LX-11
450 2253033 2253275 - NZ_CP047602.1 Thermoanaerobacterium aotearoense
451 152082 152333 + NZ_CP021781.1 Francisella adeliensis
452 1859171 1859437 + NZ_CP060731.1 Pseudoxanthomonas mexicana
453 918743 918979 - NZ_CP022278.1 Neisseria chenwenguii
454 157702 157974 - NZ_LR134343.1 Moraxella cuniculi
455 541368 541634 + NC_004556.1 Xylella fastidiosa Temecula1
456 727023 727271 + NC_008609.1 Pelobacter propionicus DSM 2379
457 507673 507915 + NZ_CP016502.1 Acetivibrio thermocellus DSM 2360
458 164880 165104 + NZ_CP009238.1 Basilea psittacipulmonis DSM 24701
459 1574488 1574712 - NZ_CP047165.1 Pelistega ratti
460 2657339 2657581 - NZ_HG917868.1 Clostridium bornimense
461 1008872 1009114 + NZ_CP034791.1 Caldicellulosiruptor changbaiensis
462 2400566 2400808 - NC_009437.1 Caldicellulosiruptor saccharolyticus DSM 8903
463 1480728 1480979 - NZ_CP038017.1 Allofrancisella frigidaquae
464 611443 611718 + NZ_CP024645.1 Rhizobacter gummiphilus
465 136494 136757 + NC_015581.1 Thiomicrospira cyclica ALM1
466 584895 585149 + NC_008344.1 Nitrosomonas eutropha C91
467 229529 229753 + NC_002971.4 Coxiella burnetii RSA 493
468 462867 463115 + NZ_CP008748.1 Mycoplasma hyosynoviae
469 4497224 4497478 - NC_014393.1 Clostridium cellulovorans 743B
470 5698915 5699154 - NZ_CP034346.1 Paenibacillus lutimineralis
471 5886519 5886800 - NZ_CP016171.1 Bordetella bronchialis
472 1682890 1683129 + NZ_AP014945.1 Caldimicrobium thiodismutans
473 1106245 1106481 + NZ_CP034909.1 Ensifer alkalisoli
474 6128088 6128327 - NZ_AP019400.1 Cohnella abietis
475 3314967 3315224 - NC_016894.1 Acetobacterium woodii DSM 1030
476 249717 249980 + NZ_CP034235.1 Paenibacillus psychroresistens
477 3412179 3412439 - NZ_CP018845.1 Herbaspirillum robiniae
478 400984 401253 + NZ_CP006950.1 Dehalococcoides mccartyi CG4
479 5132470 5132733 - NZ_CP013023.1 Paenibacillus bovis
480 3347081 3347335 - NZ_CP040924.1 Clostridium thermarum
481 1150819 1151055 + NZ_CP023067.1 Ensifer sojae CCBAU 05684
482 2947258 2947482 - NZ_CP016278.1 Diaphorobacter polyhydroxybutyrativorans
483 2791319 2791582 + NZ_CP011058.1 Paenibacillus beijingensis
484 4221416 4221640 - NC_017964.1 Advenella kashmirensis WT001
485 3631077 3631340 - NZ_CP033433.1 Cohnella candidum
486 7066704 7066949 - NZ_CP036353.1 Gimesia maris
487 16739 17014 + NZ_LR214938.2 Mycoplasma salivarium
488 128081 128362 - NZ_HG916765.1 Castellaniella defragrans 65Phen
489 4567879 4568103 - NZ_CP003915.1 Advenella mimigardefordensis DPN7
490 3266466 3266720 - NC_015687.1 Clostridium acetobutylicum DSM 1731
491 181205 181489 + NZ_LS991949.1 Mycoplasma alkalescens
492 218448 218702 + NC_011837.1 Clostridium kluyveri NBRC 12016
493 697467 697733 + NZ_CP047698.1 Pseudomonas knackmussii
494 597474 597731 - NZ_CP031188.1 Flavobacterium arcticum
495 3619726 3619965 - NZ_CP014167.1 Paenibacillus yonginensis
496 517932 518186 + NZ_CP038029.1 Sphingobacterium psychroaquaticum
497 1123774 1124028 - NZ_LR590484.1 Sphingobacterium thalpophilum
498 1092254 1092496 - NC_017096.1 Caldisericum exile AZM16c01
499 271219 271473 + NZ_CP032416.1 Clostridium fermenticellae
500 3725343 3725606 + NZ_CP035492.1 Paenibacillus protaetiae
501 593898 594182 + NZ_AP014631.1 Mycoplasma canadense
502 89456 89695 - NZ_AP019551.1 Athalassotoga saccharophila
503 4841846 4842070 - NZ_CP045293.1 Paenibacillus guangzhouensis
504 519280 519561 + NZ_CP033058.2 Mycoplasma phocicerebrale
505 506068 506334 + NZ_CP011367.1 Thioalkalivibrio versutus
506 863919 864152 - NC_016929.1 Rickettsia canadensis str. CA410
507 1080606 1080848 + NZ_CP018099.1 Caldithrix abyssi DSM 13497
508 823501 823734 - NC_017066.1 Rickettsia typhi str. TH1527
509 380644 380889 + NC_014207.1 Methylotenera versatilis 301
510 5750924 5751205 - NZ_CP016172.1 Bordetella flabilis
511 2465053 2465277 - NZ_CP045423.1 Microvirga thermotolerans
512 315842 316138 + NZ_CP030103.1 Mycoplasma cloacale
513 292535 292804 + NC_011060.1 Pelodictyon phaeoclathratiforme BU-1
514 1083017 1083280 + NZ_CP041335.1 Chitinolyticbacter meiyuanensis
515 1024581 1024838 + NC_017464.1 Ignavibacterium album JCM 16511
516 60973 61206 + NZ_CP007501.1 Polynucleobacter duraquae
517 2939662 2939886 + NZ_CP045798.1 Thermoanaerosceptrum fracticalcis
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_CP040428.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF00410.21 0.88 454 1767 same-strand Ribosomal protein S8
2 PF00253.23 0.88 454 1427 same-strand Ribosomal protein S14p/S29e
3 PF00673.23 0.9 464 872 same-strand ribosomal L5P family C-terminus
4 PF00281.21 0.91 470 871 same-strand Ribosomal protein L5
5 PF17136.6 0.9 464 543 same-strand Ribosomal proteins 50S L24/mitochondrial 39S L24
6 PF00467.31 0.62 319 534.0 same-strand KOW motif
7 PF00238.21 0.91 470 156 same-strand Ribosomal protein L14p/L23e
8 PF00831.25 0.99 512 0 same-strand Ribosomal L29 protein
9 PF00252.20 0.98 505 194.0 same-strand Ribosomal protein L16p/L10e
10 PF00189.22 1.0 514 618 same-strand Ribosomal protein S3, C-terminal domain
11 PF07650.19 0.99 512 617 same-strand KH domain
12 PF00237.21 0.99 512 1333 same-strand Ribosomal protein L22p/L17e
13 PF00203.23 0.97 499 1680.0 same-strand Ribosomal protein S19
++ More..