ProsmORF-pred
Result : Q89AZ1
Protein Information
Information Type Description
Protein name Flagellar biosynthetic protein FliQ
NCBI Accession ID AE016826.1
Organism Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Left 84702
Right 84974
Strand +
Nucleotide Sequence ATGACTATTGAATCTGTAATGAGTTTATTTTATGATGCTATGAAAGTAACGTTAATGATTTCTTTACCCTTATTATTGTCAGCGTTATGTTGTGGTTTAATTGTAAGTATTTTTCAAGCTGCCACTCAAATAAACGAACAGACGTTATCTTTTATTCCTAAAATAGCTGCAGTATTAGTATCTATTGTTATTTTTGGTCCATGGATGTTAGTTATATTATCAGATTATACACATACTTTATTTTATAATTTGTCTTATATTACTTATTCATAA
Sequence MTIESVMSLFYDAMKVTLMISLPLLLSALCCGLIVSIFQAATQINEQTLSFIPKIAAVLVSIVIFGPWMLVILSDYTHTLFYNLSYITYS
Source of smORF Swiss-Prot
Function Role in flagellar biosynthesis. {ECO:0000250}.
Pubmed ID 12522265
Domain CDD:412617
Functional Category Others
Uniprot ID Q89AZ1
ORF Length (Amino Acid) 90
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 453
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 84702 84974 + NC_004545.1 Buchnera aphidicola str. Bp (Baizongia pistaciae)
2 1371084 1371353 + NZ_CP018845.1 Herbaspirillum robiniae
3 558415 558684 - NZ_CP045769.1 Enterobacter cancerogenus
4 2364564 2364833 - NZ_CP037993.1 Herbaspirillum huttiense
5 728188 728457 + NZ_AP019007.1 Enterobacter oligotrophicus
6 2903934 2904203 + NZ_AP022508.1 Enterobacter bugandensis
7 155967 156236 - NZ_CP006569.1 Sodalis praecaptivus
8 709777 710046 - NZ_CP006569.1 Sodalis praecaptivus
9 2917527 2917796 + NZ_CP027986.1 Enterobacter sichuanensis
10 2976566 2976835 - NZ_CP027986.1 Enterobacter sichuanensis
11 2919842 2920111 + NZ_CP017184.1 Enterobacter roggenkampii
12 4341111 4341380 - NZ_CP025034.2 Enterobacter sp. SGAir0187
13 2164744 2165013 + NZ_CP017279.1 Enterobacter ludwigii
14 2224441 2224710 - NZ_CP017279.1 Enterobacter ludwigii
15 3217227 3217496 + NZ_CP043318.1 Enterobacter chengduensis
16 5213925 5214194 + NZ_CP028324.1 Massilia armeniaca
17 1698736 1699005 + NZ_CP023529.1 Lelliottia amnigena
18 3019274 3019543 + NZ_CP009756.1 Enterobacter cloacae
19 3077089 3077358 - NZ_CP009756.1 Enterobacter cloacae
20 1022544 1022813 + NC_012968.1 Methylotenera mobilis JLW8
21 2014079 2014348 + NZ_AP021881.1 Sulfuriferula nivalis
22 2921170 2921439 + NC_015968.1 Enterobacter soli
23 2221673 2221942 - NZ_CP013737.1 Herbaspirillum rubrisubalbicans M1
24 2618198 2618467 + NZ_CP019038.1 Massilia putida
25 302391 302660 + NZ_CP012371.1 Nitrosospira briensis C-128
26 2330206 2330475 + NZ_CP047349.1 Proteus terrae subsp. cibarius
27 3364964 3365233 - NZ_CP017703.1 Aeribacillus pallidus
28 1753280 1753549 + NC_010554.1 Proteus mirabilis HI4320
29 104810 105079 - NZ_AP022843.1 Halomonas hydrothermalis
30 104242 104511 - NZ_CP065135.1 Halomonas venusta
31 822151 822420 + NZ_CP059082.1 Halomonas titanicae
32 3415903 3416172 + NZ_CP040017.1 Massilia umbonata
33 994311 994580 + NZ_LT671418.1 Herminiimonas arsenitoxidans
34 5241048 5241317 + NZ_CP023422.1 Janthinobacterium svalbardensis
35 1361809 1362078 - NZ_HG322949.1 Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628
36 2286970 2287239 + NZ_CP046904.1 Massilia flava
37 2898501 2898770 + NZ_CP041185.1 Janthinobacterium tructae
38 5304808 5305077 + NZ_CP048832.1 Janthinobacterium lividum
39 3584548 3584817 - NZ_CP021358.1 Kushneria marisflavi
40 2221943 2222212 + NC_007963.1 Chromohalobacter salexigens DSM 3043
41 3263931 3264200 - NZ_CP024608.1 Massilia violaceinigra
42 1971619 1971888 + NZ_AP018738.1 Ferriphaselus amnicola
43 1213070 1213339 - NZ_AP021884.1 Sulfuriferula plumbiphila
44 2196573 2196842 + NZ_CP021106.3 Nitrosospira lacus
45 408414 408683 + NZ_CP048711.1 Kineobactrum salinum
46 3817126 3817395 + NC_018691.1 Alcanivorax dieselolei B5
47 1062487 1062756 - NZ_CP036401.1 Massilia albidiflava
48 3888696 3888965 + NZ_CP026364.1 Proteus hauseri
49 467784 468053 - NZ_CP054043.1 Yersinia mollaretii ATCC 43969
50 3104280 3104549 - NZ_CP054043.1 Yersinia mollaretii ATCC 43969
51 2730303 2730572 + NZ_CP065435.1 Halomonas sp. SS10-MC5
52 3306716 3306985 + NZ_CP021323.1 Kushneria konosiri
53 1782973 1783242 - NC_012912.1 Dickeya chrysanthemi Ech1591
54 1594095 1594364 - NZ_CP042220.2 Dickeya poaceiphila
55 1853008 1853277 - NZ_CP064781.1 Azospira restricta
56 3315202 3315471 + NZ_CP004387.1 Alcanivorax pacificus W11-5
57 3929287 3929556 + NZ_CP021435.1 Halomonas beimenensis
58 3899340 3899609 + NZ_CP014226.1 Halomonas chromatireducens
59 111290 111559 - NZ_CP048602.1 Halomonas piezotolerans
60 945866 946135 - NZ_AP012547.1 Sulfuritalea hydrogenivorans sk43H
61 3061744 3062013 + NC_014500.1 Dickeya dadantii 3937
62 2968759 2969028 + NZ_CP025799.1 Dickeya zeae
63 2995190 2995459 + NZ_CP031560.1 Dickeya dianthicola
64 3492463 3492732 - NZ_CP048812.1 Halomonas socia
65 1255828 1256097 + NC_022357.1 Sulfuricella denitrificans skB26
66 799644 799913 + NC_012969.1 Methylovorus glucosetrophus SIP3-4
67 243600 243869 - NZ_CP014646.1 Thauera humireducens
68 4656151 4656420 - NZ_CP009460.1 Dickeya fangzhongdai
69 306602 306871 + NZ_CP015137.1 Dickeya solani IPO 2222
70 985216 985485 - NZ_CP067057.1 Rahnella aceris
71 1274972 1275190 - NC_014209.1 Thermoanaerobacter mathranii subsp. mathranii str. A3
72 1251434 1251652 - NC_013921.1 Thermoanaerobacter italicus Ab9
73 1741506 1741775 - NZ_CP013990.1 Leclercia adecarboxylata
74 1987817 1988086 + NZ_FO704551.1 Xenorhabdus poinarii G6
75 2922846 2923115 + NZ_LT615367.1 Dickeya aquatica
76 1543983 1544252 - NZ_CP013661.2 Planococcus kocurii
77 2659405 2659674 - NZ_AP017928.1 Methylocaldum marinum
78 1755673 1755942 + NZ_AP018933.1 Zymobacter palmae
79 1883912 1884157 + NZ_CP033052.1 Bacillus vallismortis
80 3092101 3092370 + NZ_CP016210.1 Azoarcus olearius
81 3518783 3519052 + NZ_LR778301.1 Denitratisoma oestradiolicum
82 1135863 1136132 + NC_014207.1 Methylotenera versatilis 301
83 226944 227213 + NZ_CP016534.2 Planococcus antarcticus DSM 14505
84 3773663 3773932 + NZ_CP038034.1 Achromobacter insolitus
85 207751 208020 + NZ_CP016540.2 Planococcus versutus
86 221105 221374 + NZ_CP019401.1 Planococcus faecalis
87 5608462 5608731 + NZ_LT906435.1 Pandoraea sputorum
88 1046807 1047076 - NZ_CP040428.1 Jejubacter calystegiae
89 1045159 1045428 - NZ_CP053986.1 Achromobacter denitrificans
90 2224689 2224958 - NC_010170.1 Bordetella petrii
91 5494611 5494880 + NZ_CP010897.2 Pandoraea vervacti
92 5476727 5476996 + NZ_CP011253.3 Pandoraea oxalativorans
93 280310 280555 - NZ_CP029364.1 Bacillus halotolerans
94 1378957 1379175 - NC_015555.1 Thermoanaerobacterium xylanolyticum LX-11
95 1455866 1456084 - NZ_CP047602.1 Thermoanaerobacterium aotearoense
96 1282791 1283060 + NC_015519.1 Tepidanaerobacter acetatoxydans Re1
97 1531593 1531862 - NC_018704.1 Amphibacillus xylanus NBRC 15112
98 599478 599747 - NC_013959.1 Sideroxydans lithotrophicus ES-1
99 234644 234913 + NZ_CP016543.2 Planococcus donghaensis
100 216199 216468 + NZ_CP016537.2 Planococcus halocryophilus
101 5100762 5101031 + NZ_CP011807.3 Pandoraea faecigallinarum
102 1613223 1613468 + NZ_CP048852.1 Bacillus tequilensis
103 1709706 1709951 + NZ_CP051464.1 Bacillus mojavensis
104 1678429 1678674 + NZ_CP013984.1 Bacillus inaquosorum
105 2545132 2545401 + NZ_HG916765.1 Castellaniella defragrans 65Phen
106 1390326 1390583 - NC_015958.1 Thermoanaerobacter wiegelii Rt8.B1
107 1279126 1279383 - NC_014964.1 Thermoanaerobacter brockii subsp. finnii Ako-1
108 1283712 1283969 - NZ_CP009170.1 Thermoanaerobacter kivui
109 2120680 2120949 + NZ_CP060401.1 Xenorhabdus nematophila
110 1843259 1843528 - NZ_CP035129.1 Kosakonia cowanii
111 2774697 2774966 - NZ_CP066075.1 Paraburkholderia ginsengisoli
112 1673362 1673607 + NZ_CP034943.1 Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499
113 1705567 1705812 + NC_000964.3 Bacillus subtilis subsp. subtilis str. 168
114 2460255 2460524 + NZ_FO704550.1 Xenorhabdus doucetiae
115 1445518 1445736 - NC_014410.1 Thermoanaerobacterium thermosaccharolyticum DSM 571
116 498077 498346 - NZ_CP016176.1 Xenorhabdus hominickii
117 2688823 2689092 - NC_014829.1 Evansella cellulosilytica DSM 2522
118 133080 133349 + NZ_CP042941.1 Atlantibacter hermannii
119 1405426 1405644 - NC_003869.1 Caldanaerobacter subterraneus subsp. tengcongensis MB4
120 3233613 3233882 - NZ_CP019706.1 Pantoea alhagi
121 1527970 1528239 - NZ_CP019706.1 Pantoea alhagi
122 229957 230226 + NZ_CP016539.2 Planococcus plakortidis
123 227455 227724 + NZ_CP016538.2 Planococcus maritimus
124 228023 228292 + NZ_CP059540.1 Planococcus maritimus
125 3417729 3417998 + NZ_CP013659.2 Planococcus rifietoensis
126 1578984 1579253 + NZ_CP009416.1 Jeotgalibacillus malaysiensis
127 2260659 2260928 + NC_010694.1 Erwinia tasmaniensis Et1/99
128 75268 75537 + NZ_CP053416.1 Salmonella bongori
129 2066070 2066339 + NC_003197.2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
130 2093103 2093372 - NZ_CP045300.1 Kosakonia arachidis
131 5083613 5083882 - NZ_CP045300.1 Kosakonia arachidis
132 1955094 1955363 - NZ_CP012502.1 Bacillus beveridgei
133 1586941 1587210 + NZ_CP041666.1 Radiobacillus deserti
134 3226359 3226628 + NZ_CP048784.1 Serratia liquefaciens
135 4330154 4330423 - NZ_CP034464.1 Undibacterium parvum
136 584621 584890 + NZ_CP046415.1 Guyparkeria halophila
137 2997697 2997966 + NC_014306.1 Erwinia billingiae Eb661
138 3238926 3239195 + NC_015567.1 Serratia plymuthica AS9
139 3257466 3257735 + NZ_LR134494.1 Serratia quinivorans
140 2533791 2534060 - NZ_CP065425.1 Heyndrickxia vini
141 1621848 1622117 - NZ_CP023567.1 Erwinia pyrifoliae
142 2909795 2910064 - NZ_CP023567.1 Erwinia pyrifoliae
143 2735480 2735749 + NZ_CP072455.1 Xenorhabdus budapestensis
144 80354 80623 - NZ_CP016337.1 Kosakonia sacchari
145 2988495 2988764 + NZ_CP063425.1 Kosakonia pseudosacchari
146 3692809 3693078 - NZ_CP063425.1 Kosakonia pseudosacchari
147 1523981 1524250 + NZ_CP038469.1 Citrobacter tructae
148 4361915 4362184 - NZ_CP044098.1 Citrobacter portucalensis
149 738018 738287 + NZ_CP033744.1 Citrobacter freundii
150 2856469 2856738 + NZ_CP014864.1 Microbulbifer thermotolerans
151 1085290 1085559 + NZ_CP006837.1 Lysinibacillus varians
152 3584980 3585249 - NZ_CP019980.1 Lysinibacillus sphaericus
153 4279543 4279812 + NZ_LT556085.1 Citrobacter amalonaticus
154 1986178 1986447 - NZ_CP071320.1 Serratia ureilytica
155 2410688 2410957 + NZ_CP016948.1 Serratia surfactantfaciens
156 3112268 3112537 + NZ_CP038662.1 Serratia nematodiphila
157 2085672 2085941 - NZ_CP014007.2 Kosakonia oryzae
158 1259620 1259886 + NZ_CP014007.2 Kosakonia oryzae
159 3118903 3119172 + NZ_CP015113.1 Kosakonia radicincitans
160 3921355 3921621 - NZ_CP015113.1 Kosakonia radicincitans
161 1491861 1492130 + NZ_CP065534.1 Lonsdalea populi
162 1569973 1570242 - NC_013961.1 Erwinia amylovora CFBP1430
163 2766203 2766472 - NC_013961.1 Erwinia amylovora CFBP1430
164 3242879 3243148 - NZ_CP014616.1 Sporosarcina psychrophila
165 1412438 1412707 - NZ_CP011361.2 Salimicrobium jeotgali
166 1620755 1621024 - NZ_CP054058.1 Scandinavium goeteborgense
167 2642950 2643219 + NZ_CP023009.1 Lonsdalea britannica
168 4028936 4029205 - NZ_CP034346.1 Paenibacillus lutimineralis
169 2313865 2314134 - NZ_CP011930.1 Herbaspirillum seropedicae
170 3544092 3544361 + NZ_CP034235.1 Paenibacillus psychroresistens
171 2654142 2654411 - NZ_CP045205.1 Citrobacter telavivensis
172 2558656 2558925 - NZ_CP019659.1 Paenibacillus larvae subsp. larvae
173 986994 987263 - NC_009792.1 Citrobacter koseri ATCC BAA-895
174 2690533 2690802 + NC_013892.1 Xenorhabdus bovienii SS-2004
175 2134202 2134471 + NC_013716.1 Citrobacter rodentium ICC168
176 4477665 4477934 + NZ_CP065640.1 Serratia rubidaea
177 92322 92591 - NZ_CP017786.1 Bacillus xiamenensis
178 1606864 1607133 + NZ_CP011150.1 Bacillus altitudinis
179 3712027 3712296 - NZ_CP043404.1 Bacillus safensis
180 2399624 2399893 + NZ_CP025682.1 Azoarcus pumilus
181 2448661 2448930 - NZ_CP051548.1 Phytobacter diazotrophicus
182 1169503 1169772 - NZ_CP011602.1 Phytobacter ursingii
183 1504235 1504504 + NZ_CP031223.1 Psychrobacillus glaciei
184 1206080 1206349 - NZ_CP068053.1 Peribacillus psychrosaccharolyticus
185 1702538 1702807 + NZ_CP023704.1 Caldibacillus thermoamylovorans
186 2060372 2060641 - NZ_CP017962.1 Virgibacillus halodenitrificans
187 2637982 2638251 + NZ_CP061511.1 Mixta calida
188 74936 75205 + NZ_CP061511.1 Mixta calida
189 3063364 3063633 + NZ_CP015108.1 Sporosarcina ureae
190 3307803 3308072 + NZ_LR134475.1 Klebsiella aerogenes
191 1030592 1030861 + NZ_AP021888.1 Thiosulfativibrio zosterae
192 3239870 3240142 - NC_005363.1 Bdellovibrio bacteriovorus HD100
193 1308104 1308373 + NZ_CP008876.1 Terribacillus goriensis
194 1774639 1774914 - NZ_AP019755.1 Nitrosomonas stercoris
195 3142107 3142376 + NZ_LT906479.1 Serratia ficaria
196 4735281 4735550 - NZ_CP026520.1 Paenibacillus chitinolyticus
197 4158245 4158514 + NZ_CP007044.2 Chania multitudinisentens RB-25
198 2306838 2307107 - NC_013791.2 Alkalihalobacillus pseudofirmus OF4
199 6144683 6144952 + NZ_CP054614.1 Paenibacillus barcinonensis
200 3709990 3710259 - NZ_CP010820.1 Lysinibacillus fusiformis
201 2300551 2300796 - NZ_CP011937.1 Bacillus velezensis
202 1660331 1660576 + NZ_CP053376.1 Bacillus amyloliquefaciens
203 1144884 1145156 + NZ_CP045571.1 Acidithiobacillus thiooxidans ATCC 19377
204 973556 973825 + NZ_CP057657.1 Escherichia fergusonii
205 2405557 2405826 + NZ_CP034148.1 Pantoea agglomerans
206 1673518 1673787 - NZ_CP045720.1 Pantoea eucalypti
207 3297862 3298131 + NC_010622.1 Paraburkholderia phymatum STM815
208 3430198 3430467 + NZ_CP026111.1 Paraburkholderia terrae
209 174364 174633 - NZ_CP017269.1 Geosporobacter ferrireducens
210 2741447 2741716 + NZ_CP050150.1 Hafnia alvei
211 860940 861209 - NZ_CP048286.1 Paenibacillus rhizovicinus
212 2769142 2769411 + NZ_CP026377.1 Mixta gaviniae
213 126064 126333 + NZ_CP026377.1 Mixta gaviniae
214 1642884 1643153 - NZ_CP038853.1 Pantoea vagans
215 2333861 2334130 + NZ_CP059066.1 Koleobacter methoxysyntrophicus
216 1833510 1833779 + NZ_CP023665.1 Bacillus paralicheniformis
217 2335179 2335448 - NZ_LT907988.1 Orrella dioscoreae
218 748798 749067 - NZ_CP027107.1 Cronobacter sakazakii
219 1464912 1465181 - NZ_CP013940.1 Cronobacter malonaticus LMG 23826
220 2697237 2697506 + NZ_CP012257.1 Cronobacter universalis NCTC 9529
221 2792308 2792577 + NZ_CP012266.1 Cronobacter dublinensis subsp. dublinensis LMG 23823
222 1090137 1090406 + NZ_CP014167.1 Paenibacillus yonginensis
223 1832769 1833038 + NZ_LT603683.1 Bacillus glycinifermentans
224 1086555 1086824 - NZ_CP068564.1 Keratinibaculum paraultunense
225 57020 57289 - NC_016893.1 Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)
226 5532250 5532471 + NZ_CP016809.1 Paenibacillus ihbetae
227 4691930 4692148 + NZ_CP041217.1 Saccharibacillus brassicae
228 1810883 1811152 + NC_006270.3 Bacillus licheniformis DSM 13 = ATCC 14580
229 5687194 5687463 - NZ_CP018420.1 Pseudomonas veronii
230 3337369 3337638 + NZ_CP034437.1 Paenibacillus albus
231 2044376 2044645 + NC_017668.1 Halobacillus halophilus DSM 2266
232 1593693 1593962 - NZ_CP040602.1 Thiomicrorhabdus sediminis
233 453872 454123 - NZ_LN907858.1 Helicobacter typhlonius
234 1092647 1092916 + NZ_CP033433.1 Cohnella candidum
235 2361268 2361537 + NZ_LN907827.1 Erwinia gerundensis
236 3194282 3194551 - NZ_CP010311.1 Geoalkalibacter subterraneus
237 3444652 3444921 - NZ_CP041046.1 Luteibacter pinisoli
238 1262978 1263247 - NZ_CP012268.1 Cronobacter muytjensii ATCC 51329
239 1782936 1783205 + NZ_CP021850.1 Pseudoclostridium thermosuccinogenes
240 6106821 6107090 + NZ_CP056030.1 Pseudomonas eucalypticola
241 2669983 2670252 + NZ_CP012264.1 Cronobacter condimenti 1330
242 1764372 1764641 - NZ_CP054020.1 Thiomicrorhabdus xiamenensis
243 1832181 1832450 + NC_012880.1 Musicola paradisiaca Ech703
244 256781 257050 - NZ_CP009787.1 Yersinia rohdei
245 2205361 2205630 + NZ_CP053989.1 Niallia circulans
246 2842273 2842542 + NZ_CP048209.1 Paenibacillus lycopersici
247 859882 860106 + NZ_AP018722.1 Thiomicrorhabdus aquaedulcis
248 902404 902673 + NZ_CP035033.1 Hydrogenovibrio thermophilus
249 2304907 2305176 - NC_005126.1 Photorhabdus laumondii subsp. laumondii TTO1
250 1332106 1332375 - NZ_CP013232.1 Collimonas fungivorans
251 1449092 1449361 + NZ_AP021853.1 Sporolactobacillus terrae
252 1741180 1741449 - NZ_AP023184.1 Buttiauxella agrestis
253 2943658 2943927 + NZ_CP038498.1 Pectobacterium punjabense
254 2115450 2115719 + NZ_CP015749.1 Pectobacterium parmentieri
255 4865893 4866162 + NZ_CP015750.1 Pectobacterium wasabiae CFBP 3304
256 950920 951189 - NZ_CP013235.1 Collimonas arenae
257 415002 415271 - NZ_CP017480.1 Luteibacter rhizovicinus DSM 16549
258 5385009 5385278 + NZ_CP011254.1 Serratia fonticola
259 2816988 2817257 + NZ_CP011118.1 Yersinia enterocolitica
260 2265732 2266001 + NZ_CP032487.1 Yersinia hibernica
261 3146482 3146751 + NZ_CP009125.1 Pectobacterium atrosepticum
262 1893006 1893275 + NZ_CP017482.1 Pectobacterium polaris
263 1756628 1756897 - NZ_CP038012.1 Sporosarcina pasteurii
264 1277051 1277269 + NZ_AP018676.1 Helicobacter cinaedi
265 2420478 2420723 - NZ_AP019308.1 Paenibacillus baekrokdamisoli
266 1757824 1758093 - NZ_CP045845.1 Kluyvera intermedia
267 3623514 3623783 + NZ_CP011388.1 Paenibacillus swuensis
268 417644 417913 - NZ_CP051461.1 Polaromonas vacuolata
269 2784503 2784772 + NZ_CP043727.1 Yersinia canariae
270 1387190 1387462 - NC_014758.1 Calditerrivibrio nitroreducens DSM 19672
271 1760149 1760418 - NZ_CP023525.1 Cedecea neteri
272 4279195 4279464 - NZ_AP019400.1 Cohnella abietis
273 1898785 1899054 + NZ_CP043420.1 Kushneria phosphatilytica
274 2462989 2463252 - NZ_CP015217.1 Leptospira tipperaryensis
275 1679974 1680243 - NZ_LR134201.1 Cedecea lapagei
276 1245733 1246002 + NC_008786.1 Verminephrobacter eiseniae EF01-2
277 108877 109146 - NZ_CP009781.1 Yersinia aldovae 670-83
278 1864815 1865084 - NZ_CP046293.1 Yersinia intermedia
279 2529401 2529670 + NZ_LR134373.1 Yersinia pseudotuberculosis
280 3711703 3711972 - NZ_CP007230.1 Yersinia similis
281 3096323 3096592 - NZ_CP019699.1 Novibacillus thermophilus
282 2547914 2548183 + NC_014972.1 Desulfobulbus propionicus DSM 2032
283 4860929 4861198 - NC_009483.1 Geobacter uraniireducens Rf4
284 3407224 3407493 - NZ_CP009286.1 Paenibacillus stellifer
285 606690 606959 - NZ_CP031092.1 Salicibibacter kimchii
286 616379 616648 - NZ_CP035485.1 Salicibibacter halophilus
287 1387173 1387442 + NZ_CP012024.1 Bacillus smithii
288 1279875 1280144 + NZ_CP013652.1 Paenibacillus naphthalenovorans
289 3069154 3069423 + NZ_CP065044.1 Pectobacterium aroidearum
290 2450768 2451037 + NZ_LR134338.1 Brevibacillus brevis
291 798641 798910 + NZ_CP011078.1 Yersinia ruckeri
292 2507263 2507532 - NZ_CP017560.1 Sporosarcina ureilytica
293 1575382 1575654 - NZ_CP040676.1 Exiguobacterium mexicanum
294 4620289 4620507 + NZ_CP011058.1 Paenibacillus beijingensis
295 2038132 2038359 - NZ_CP016502.1 Acetivibrio thermocellus DSM 2360
296 2935592 2935861 + NZ_CP029640.1 Paraburkholderia dokdonella
297 3082887 3083156 + NZ_CP049134.1 Paraburkholderia tropica
298 1999937 2000167 + NZ_CP061336.1 Ruminiclostridium herbifermentans
299 4652084 4652353 + NZ_CP041730.1 Chitinimonas arctica
300 1667483 1667734 + NZ_CP063087.1 Helicobacter winghamensis
301 2811397 2811666 + NZ_LS483422.1 Providencia heimbachae
302 2876406 2876675 + NZ_CP048796.1 Providencia vermicola
303 3518799 3519068 + NZ_CP023536.1 Providencia alcalifaciens
304 2788496 2788765 + NZ_CP012871.1 [Enterobacter] lignolyticus
305 1116657 1116926 - NC_014394.1 Gallionella capsiferriformans ES-2
306 582378 582647 + NC_011979.1 Geobacter daltonii FRC-32
307 1457484 1457753 + NC_013205.1 Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
308 3173450 3173719 + NZ_CP068285.1 Ralstonia syzygii subsp. celebesensis
309 6033567 6033836 + NZ_CP013480.3 Pandoraea norimbergensis
310 1952531 1952800 + NZ_AP014857.1 Escherichia albertii
311 2586129 2586398 + NZ_LR134340.1 Escherichia marmotae
312 1602155 1602385 + NC_009922.1 Alkaliphilus oremlandii OhILAs
313 4183877 4184146 + NZ_CP020388.1 Pluralibacter gergoviae
314 1552711 1552980 + NZ_CP020388.1 Pluralibacter gergoviae
315 2174282 2174503 - NC_019897.1 Thermobacillus composti KWC4
316 2022486 2022755 + NC_004337.2 Shigella flexneri 2a str. 301
317 2022616 2022885 + NC_000913.3 Escherichia coli str. K-12 substr. MG1655
318 2647299 2647568 + NC_002695.2 Escherichia coli O157:H7 str. Sakai
319 3436041 3436286 + NZ_CP063356.1 Anaerobacillus isosaccharinicus
320 948950 949225 + NC_008578.1 Acidothermus cellulolyticus 11B
321 496734 496973 + NZ_CP014991.1 Helicobacter himalayensis
322 454227 454496 + NC_002939.5 Geobacter sulfurreducens PCA
323 1787645 1787914 + NZ_AP017312.1 Aneurinibacillus soli
324 2645464 2645733 + NZ_CP026363.1 Brevibacillus agri
325 4407841 4408110 + NZ_CP045298.1 Paenibacillus brasilensis
326 3454191 3454460 - NZ_CP020028.1 Paenibacillus kribbensis
327 2129901 2130170 + NZ_CP048877.1 Thermosulfuriphilus ammonigenes
328 1562831 1563097 + NZ_CP021886.1 Helicobacter apodemus
329 2730466 2730735 + NZ_CP062804.1 Cupriavidus basilensis
330 2676555 2676776 - NC_015275.1 Cellulosilyticum lentocellum DSM 5427
331 5459370 5459639 + NZ_CP047385.1 Pandoraea fibrosis
332 82721 82993 - NZ_CP013414.1 Burkholderia ubonensis
333 2099590 2099808 - NZ_CP009687.1 Clostridium aceticum
334 606037 606309 + NZ_CP035108.1 Geovibrio thiophilus
335 2348875 2349093 - NZ_CP020559.1 Clostridium formicaceticum
336 1794909 1795178 - NC_011899.1 Halothermothrix orenii H 168
337 131648 131917 - NZ_CP013481.2 Pandoraea apista
338 890936 891205 + NZ_CP049115.1 Pantoea stewartii
339 926133 926402 + NZ_AP020335.1 Hydrogenovibrio marinus
340 2723138 2723368 - NC_009633.1 Alkaliphilus metalliredigens QYMF
341 50475 50747 - NZ_CP020737.1 Paraburkholderia acidophila
342 5255726 5255995 + NC_023018.2 Pandoraea pnomenusa
343 119459 119728 + NZ_CP006664.1 Edwardsiella anguillarum ET080813
344 138211 138480 + NZ_LR134302.1 Achromobacter spanius
345 515151 515420 - NZ_CP038033.1 Nitrosococcus wardiae
346 5734617 5734886 + NZ_CP010310.2 Pandoraea pulmonicola
347 1901899 1902168 - NC_017554.1 Pantoea ananatis PA13
348 1793716 1793985 - NC_010645.1 Bordetella avium 197N
349 2876662 2876931 + NZ_CP034036.1 Brenneria nigrifluens DSM 30175 = ATCC 13028
350 2227793 2228062 + NZ_CP014137.1 Brenneria goodwinii
351 105744 106016 - NZ_CP013459.1 Burkholderia stagnalis
352 1543699 1543968 + NC_007614.1 Nitrosospira multiformis ATCC 25196
353 3877665 3877934 + NC_016641.1 Paenibacillus terrae HPL-003
354 364534 364764 - NZ_CP028339.1 Thauera aromatica K172
355 1659802 1660068 + NZ_CP012541.1 Campylobacter concisus
356 1363161 1363430 + NZ_CP011258.1 Ralstonia mannitolilytica
357 1691912 1692181 + NZ_CP015378.1 Fictibacillus phosphorivorans
358 2228422 2228691 - NZ_CP032518.1 Cupriavidus oxalaticus
359 2347472 2347741 + NZ_CP015581.1 Tatumella citrea
360 2320647 2320916 + NC_012779.2 Edwardsiella ictaluri 93-146
361 3944901 3945170 + NC_014532.2 Halomonas elongata DSM 2581
362 2087624 2087890 + NC_007575.1 Sulfurimonas denitrificans DSM 1251
363 3004018 3004287 + NC_012962.1 Photorhabdus asymbiotica
364 4539684 4539953 + NZ_CP013106.1 Halomonas huangheensis
365 1867691 1867960 + NZ_CP028271.1 Mixta intestinalis
366 3847797 3848066 + NZ_CP028271.1 Mixta intestinalis
367 2335915 2336184 - NZ_CP016020.1 Bacillus weihaiensis
368 3728329 3728553 - NZ_CP053708.1 Lichenicola cladoniae
369 174431 174655 + NZ_CP009709.1 Weizmannia coagulans DSM 1 = ATCC 7050
370 1073459 1073728 + NZ_AP022853.1 Sulfurimicrobium lacus
371 3956630 3956899 - NZ_CP024035.1 Priestia aryabhattai
372 3721703 3721972 - NC_013960.1 Nitrosococcus halophilus Nc 4
373 4872806 4873075 + NZ_CP011104.1 Photorhabdus thracensis
374 1455259 1455528 - NZ_CP034035.1 Brenneria rubrifaciens
375 2535778 2536047 - NZ_CP022437.1 Virgibacillus necropolis
376 713499 713771 + NZ_CP013341.1 Nitrosomonas ureae
377 4563064 4563333 + NZ_CP047495.1 Pectobacterium brasiliense
378 1815503 1815772 - NZ_CP051652.1 Pectobacterium carotovorum
379 1938286 1938555 - NZ_CP034938.1 Pectobacterium odoriferum
380 3025989 3026258 - NZ_CP017561.1 Paraburkholderia sprentiae WSM5005
381 1414494 1414763 - NZ_CP016043.1 Edwardsiella hoshinae
382 3043078 3043347 + NZ_CP046913.1 Paraburkholderia acidisoli
383 1109870 1110088 + NC_014810.2 Helicobacter felis ATCC 49179
384 390212 390442 - NZ_CP018839.1 Thauera chlorobenzoica
385 3095701 3095970 - NZ_CP023706.1 Edwardsiella tarda
386 2101553 2101822 + NZ_CP042593.1 Bacillus dafuensis
387 114814 115083 - NZ_CP022983.1 Cytobacillus kochii
388 1798593 1798862 + NC_022524.1 Bacillus infantis NRRL B-14911
389 1426497 1426742 - NC_005090.1 Wolinella succinogenes DSM 1740
390 2732856 2733125 - NZ_CP018058.1 Geobacillus thermocatenulatus
391 121704 121943 + NZ_CP007774.1 Campylobacter volucris LMG 24379
392 21958 22227 - NZ_CP045302.1 Azotobacter salinestris
393 2409089 2409358 - NC_012560.1 Azotobacter vinelandii DJ
394 2256224 2256493 - NZ_CP015958.1 Paraburkholderia caribensis
395 121602 121868 + NZ_CP007770.1 Campylobacter insulaenigrae NCTC 12927
396 1249713 1249982 + NC_006510.1 Geobacillus kaustophilus HTA426
397 335566 335835 + NZ_CP061470.1 Geobacillus zalihae
398 697553 697822 + NZ_CP061472.1 Geobacillus thermoleovorans
399 1292284 1292553 + NZ_CP011971.1 Steroidobacter denitrificans
400 256259 256525 + NZ_CP053831.1 Campylobacter mucosalis
401 1588940 1589209 + NZ_CP012944.1 Ralstonia solanacearum
402 1156111 1156386 + NZ_CP030126.1 Indioceanicola profundi
403 2335525 2335794 - NZ_CP029736.1 Providencia rettgeri
404 136262 136513 - NC_017735.1 Helicobacter cetorum MIT 99-5656
405 1980107 1980376 + NZ_CP054624.1 Cupriavidus gilardii
406 2270596 2270868 - NZ_CP035900.1 Burkholderia glumae
407 2120428 2120697 - NZ_CP014342.1 Geobacillus subterraneus
408 114888 115157 - NZ_CP011568.3 Pandoraea thiooxydans
409 2008658 2008927 - NZ_CP011835.1 Azotobacter chroococcum
410 134323 134568 + NC_012039.1 Campylobacter lari RM2100
411 135937 136182 + NZ_CP007773.1 Campylobacter subantarcticus LMG 24377
412 142574 142819 + NZ_CP053848.1 Campylobacter ornithocola
413 106172 106411 + NZ_CP053825.1 Campylobacter armoricus
414 2523063 2523332 - NZ_CP042382.1 Pistricoccus aurantiacus
415 4240525 4240794 - NZ_AP023213.1 Citrifermentans bremense
416 777268 777534 + NZ_CP063079.1 Campylobacter peloridis
417 171571 171837 + NZ_CP012547.1 Campylobacter pinnipediorum subsp. pinnipediorum
418 1942430 1942699 - NZ_CP016440.1 Bordetella pseudohinzii
419 6197128 6197397 + NZ_CP045295.1 Paenibacillus cellulositrophicus
420 1678833 1679102 + NZ_CP016268.1 Woeseia oceani
421 19833 20105 - NZ_CP002580.1 Burkholderia plantarii
422 666644 666889 + NZ_LS483446.1 Helicobacter mustelae
423 2813984 2814253 + NC_021287.1 Caballeronia insecticola
424 213249 213488 + NZ_CP010995.1 Campylobacter iguaniorum
425 1451178 1451396 - NC_017379.1 Helicobacter pylori Puno135
426 2852572 2852841 + NZ_CP043611.1 Paenibacillus antarcticus
427 636628 636897 - NZ_CP022987.1 Pusillimonas thiosulfatoxidans
428 2564114 2564383 - NC_002570.2 Alkalihalobacillus halodurans C-125
429 43069 43341 - NZ_CP013450.1 Burkholderia cenocepacia
430 1714212 1714484 - NZ_CP009555.1 Burkholderia oklahomensis C6786
431 3688537 3688806 - NZ_CP021395.1 Bordetella hinzii
432 1750128 1750394 - NZ_CP053826.1 Campylobacter curvus
433 170336 170608 - NZ_CP009832.1 Burkholderia multivorans ATCC BAA-247
434 53266 53538 - NZ_CP013401.1 Burkholderia metallica
435 2838854 2839123 + NZ_CP017755.1 Cupriavidus malaysiensis
436 633650 633919 - NZ_CP039288.1 Cupriavidus necator H16
437 95735 95953 - NC_008229.1 Helicobacter acinonychis str. Sheeba
438 31526 31798 + NC_007651.1 Burkholderia thailandensis E264
439 2432875 2433144 - NZ_CP016379.1 Anoxybacter fermentans
440 905274 905543 - NZ_CP031123.2 Providencia huaxiensis
441 1857023 1857292 - NZ_CP043146.1 Bordetella holmesii
442 186026 186244 + NZ_CP059443.1 Campylobacter fetus
443 548053 548325 + NZ_CP009727.1 Burkholderia mallei
444 1711097 1711369 - NZ_CP008781.1 Burkholderia pseudomallei
445 2217384 2217653 + NC_017033.1 Frateuria aurantia DSM 6220
446 3116657 3116926 - NC_020541.1 Rhodanobacter denitrificans
447 1365541 1365810 - NZ_CP022989.1 Paraburkholderia aromaticivorans
448 3842551 3842820 + NZ_CP024941.1 Paraburkholderia terricola
449 4681447 4681716 + NC_007951.1 Paraburkholderia xenovorans LB400
450 3811946 3812215 + NZ_CP024934.1 Paraburkholderia graminis
451 60520 60792 - NZ_CP013398.1 Burkholderia seminalis
452 1944562 1944831 + NZ_CP031467.1 Paraburkholderia caffeinilytica
453 2140931 2141200 - NZ_CP014841.1 Dyella thiooxydans
454 1727197 1727466 - NC_014378.1 Acetohalobium arabaticum DSM 5501
455 1784305 1784574 - NZ_AP018724.1 Sulfurivermis fontis
456 1362143 1362412 - NC_007498.2 Syntrophotalea carbinolica DSM 2380
457 4232219 4232488 + NC_010681.1 Paraburkholderia phytofirmans PsJN
458 3002533 3002802 + NZ_CP046909.1 Paraburkholderia acidiphila
459 54568 54840 - NC_007510.1 Burkholderia lata
460 1933948 1934223 + NZ_CP018632.1 Granulosicoccus antarcticus IMCC3135
461 1356846 1357118 - NZ_CP011503.1 Burkholderia pyrrocinia
462 3275065 3275337 + NZ_CP009795.1 Burkholderia dolosa AU0158
463 48026 48298 - NZ_CP045235.1 Burkholderia cepacia
464 918959 919228 - NZ_AP019378.1 Bordetella parapertussis
465 2357187 2357456 - NZ_LR134326.1 Bordetella bronchiseptica
466 1149450 1149719 - NC_018518.1 Bordetella pertussis 18323
467 62172 62447 + NC_013739.1 Conexibacter woesei DSM 14684
468 2637016 2637285 - NZ_LS483476.1 Lederbergia lentus
469 1335190 1335459 - NC_011768.1 Desulfatibacillum aliphaticivorans
470 2622833 2623102 - NZ_CP014544.1 Zhongshania aliphaticivorans
471 204032 204298 - NZ_CP053828.1 Campylobacter hyointestinalis subsp. lawsonii
++ More..
Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_CP018845.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF02154.17 0.92 416 1763 same-strand Flagellar motor switch protein FliM
2 PF01052.22 0.93 421 1600.5 same-strand Type III flagellar switch regulator (C-ring) FliN C-term
3 PF00813.22 0.94 425 17 same-strand FliP family
4 PF01311.22 0.93 423 8 same-strand Bacterial export proteins, family 1
5 PF03748.16 0.65 295 2681.0 same-strand Flagellar basal body-associated protein FliL
6 PF04347.15 0.86 388 777.5 same-strand Flagellar biosynthesis protein, FliO
++ More..