Result : Q89AE3
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 30S ribosomal protein S16 |
| NCBI Accession ID | AE016826.1 |
| Organism | Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) |
| Left | 414937 |
| Right | 415200 |
| Strand | + |
| Nucleotide Sequence | ATGGTAAAAATTCGTTTAGTAAGATTAGGAGCAAAAAAACGTCCATTTTATAAAATAGTAATAGCTGACAGTAGATATCCTAGAAATGGAAAATTCATTGAAAAAATAGGTTTTTTTAAGCCGTTATTGAGCATAAAACATCCGCCACAAATATGCATAAATACTCTTAGAATAACACATTGGATAAAAAATGGTGCGATTATGTCCAAACGAGTTAAAAAATTAGTAAAAATACATTCTTATATTAATAAAAAAATAAAATAA |
| Sequence | MVKIRLVRLGAKKRPFYKIVIADSRYPRNGKFIEKIGFFKPLLSIKHPPQICINTLRITHWIKNGAIMSKRVKKLVKIHSYINKKIK |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl00368. Profile Description: Ribosomal protein S16. This model describes ribosomal S16 of bacteria and organelles. [Protein synthesis, Ribosomal proteins: synthesis and modification] |
| Pubmed ID | 12522265 |
| Domain | CDD:412339 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | Q89AE3 |
| ORF Length (Amino Acid) | 87 |
++ More..
| Conservation Analysis |
No. of Species: 440
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 414937 | 415200 | + | NC_004545.1 | Buchnera aphidicola str. Bp (Baizongia pistaciae) |
| 2 | 313607 | 313855 | + | NZ_CP018804.1 | Histophilus somni |
| 3 | 1713084 | 1713302 | + | NZ_CP016502.1 | Acetivibrio thermocellus DSM 2360 |
| 4 | 2928240 | 2928482 | - | NZ_CP031416.1 | Gallaecimonas mangrovi |
| 5 | 3593775 | 3594047 | - | NZ_CP053073.1 | Usitatibacter palustris |
| 6 | 1260815 | 1261075 | + | NZ_CP050508.1 | Raoultella terrigena |
| 7 | 805625 | 805876 | + | NC_014541.1 | Ferrimonas balearica DSM 9799 |
| 8 | 4277996 | 4278241 | - | NC_003910.7 | Colwellia psychrerythraea 34H |
| 9 | 2880405 | 2880653 | - | NZ_CP013187.1 | Pseudoalteromonas phenolica |
| 10 | 1104132 | 1104380 | - | NZ_LR134327.1 | Aggregatibacter aphrophilus ATCC 33389 |
| 11 | 1438006 | 1438257 | + | NZ_CP046378.1 | Shewanella algae |
| 12 | 1712949 | 1713206 | - | NZ_CP021376.1 | Oceanisphaera avium |
| 13 | 1822142 | 1822384 | + | NC_015589.1 | Desulfotomaculum ruminis DSM 2154 |
| 14 | 148578 | 148826 | - | NZ_LS483443.1 | Aggregatibacter segnis ATCC 33393 |
| 15 | 2332666 | 2332917 | + | NZ_CP021377.1 | Oceanisphaera profunda |
| 16 | 874601 | 874849 | + | NZ_CP009610.1 | Haemophilus influenzae |
| 17 | 963832 | 964080 | + | NZ_LS483429.1 | Haemophilus aegyptius |
| 18 | 3251293 | 3251541 | - | NC_012691.1 | Tolumonas auensis DSM 9187 |
| 19 | 2221058 | 2221297 | - | NZ_CP048436.1 | Flavonifractor plautii |
| 20 | 1658496 | 1658744 | + | NZ_CP009888.1 | Pseudoalteromonas piratica |
| 21 | 5044573 | 5044821 | - | NZ_CP020388.1 | Pluralibacter gergoviae |
| 22 | 2399530 | 2399778 | - | NZ_CP032090.1 | Pseudoalteromonas donghaensis |
| 23 | 5099258 | 5099506 | - | NZ_CP040428.1 | Jejubacter calystegiae |
| 24 | 102402 | 102641 | + | NZ_CP047224.1 | Neorickettsia findlayensis |
| 25 | 1180775 | 1181017 | + | NZ_CP035130.1 | Gudongella oleilytica |
| 26 | 939386 | 939634 | + | NZ_CP011039.1 | Pseudoalteromonas spongiae UST010723-006 |
| 27 | 101681 | 101920 | + | NC_007798.1 | Neorickettsia sennetsu str. Miyayama |
| 28 | 822027 | 822245 | + | NC_011898.1 | Ruminiclostridium cellulolyticum H10 |
| 29 | 3148449 | 3148697 | - | NZ_CP034148.1 | Pantoea agglomerans |
| 30 | 920490 | 920738 | + | NZ_CP038853.1 | Pantoea vagans |
| 31 | 2615728 | 2615976 | - | NZ_CP027523.1 | Pseudoalteromonas carrageenovora |
| 32 | 2712765 | 2713013 | - | NZ_CP028271.1 | Mixta intestinalis |
| 33 | 903635 | 903883 | + | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 34 | 927880 | 928128 | + | NZ_CP023567.1 | Erwinia pyrifoliae |
| 35 | 4042830 | 4043078 | - | NZ_CP072425.1 | Pseudoalteromonas viridis |
| 36 | 3266214 | 3266462 | - | NZ_LR134340.1 | Escherichia marmotae |
| 37 | 967100 | 967348 | + | NZ_LT615367.1 | Dickeya aquatica |
| 38 | 1031584 | 1031832 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 39 | 4029248 | 4029496 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 40 | 2744588 | 2744836 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 41 | 2745937 | 2746185 | - | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 42 | 2715038 | 2715286 | - | NZ_AP014857.1 | Escherichia albertii |
| 43 | 3466190 | 3466438 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 44 | 2765777 | 2766025 | - | NZ_CP011025.1 | Pseudoalteromonas arctica A 37-1-2 |
| 45 | 686953 | 687201 | - | NZ_CP072133.1 | Pseudoalteromonas xiamenensis |
| 46 | 805857 | 806105 | - | NZ_LS483458.1 | Haemophilus haemolyticus |
| 47 | 1047517 | 1047765 | + | NZ_LT906463.1 | Haemophilus pittmaniae |
| 48 | 1091775 | 1092023 | + | NZ_CP033065.1 | Pseudoalteromonas agarivorans |
| 49 | 2564498 | 2564746 | - | NZ_CP023464.1 | Pseudoalteromonas atlantica |
| 50 | 3862135 | 3862383 | - | NC_014306.1 | Erwinia billingiae Eb661 |
| 51 | 1286493 | 1286741 | - | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 52 | 1176478 | 1176726 | + | NZ_CP011028.1 | Pseudoalteromonas espejiana DSM 9414 |
| 53 | 1882774 | 1883022 | - | NZ_CP049115.1 | Pantoea stewartii |
| 54 | 636755 | 637003 | - | NZ_CP042941.1 | Atlantibacter hermannii |
| 55 | 1202892 | 1203140 | - | NZ_CP040863.1 | Rodentibacter heylii |
| 56 | 1074554 | 1074802 | + | NC_017554.1 | Pantoea ananatis PA13 |
| 57 | 793804 | 794049 | - | NZ_CP035807.1 | Thiospirochaeta perfilievii |
| 58 | 3360592 | 3360840 | - | NZ_CP040449.1 | Aeromonas simiae |
| 59 | 1100689 | 1100937 | + | NZ_CP011041.1 | Pseudoalteromonas tetraodonis |
| 60 | 1086900 | 1087148 | + | NZ_CP011030.1 | Pseudoalteromonas issachenkonii |
| 61 | 547703 | 547951 | + | NZ_CP033078.1 | Vibrio zhugei |
| 62 | 974005 | 974253 | + | NC_007481.1 | Pseudoalteromonas translucida |
| 63 | 1038192 | 1038440 | + | NZ_CP011036.1 | Pseudoalteromonas nigrifaciens |
| 64 | 4462092 | 4462340 | - | NZ_CP019628.1 | Pseudoalteromonas aliena |
| 65 | 2499002 | 2499250 | + | NZ_CP019706.1 | Pantoea alhagi |
| 66 | 1526278 | 1526529 | + | NC_016901.1 | Shewanella baltica OS678 |
| 67 | 3550837 | 3551085 | - | NZ_AP022508.1 | Enterobacter bugandensis |
| 68 | 1187814 | 1188062 | + | NZ_CP013990.1 | Leclercia adecarboxylata |
| 69 | 942300 | 942548 | + | NZ_CP045720.1 | Pantoea eucalypti |
| 70 | 3521806 | 3522054 | - | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 71 | 3405778 | 3406026 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 72 | 3690913 | 3691161 | - | NZ_CP041660.1 | Catenovulum sediminis |
| 73 | 2647560 | 2647799 | + | NC_016048.1 | Oscillibacter valericigenes Sjm18-20 |
| 74 | 3507985 | 3508233 | - | NZ_CP025799.1 | Dickeya zeae |
| 75 | 1197955 | 1198203 | - | NZ_LR134510.1 | Actinobacillus delphinicola |
| 76 | 1705770 | 1706018 | + | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 77 | 374250 | 374498 | + | NZ_CP011602.1 | Phytobacter ursingii |
| 78 | 2961740 | 2961988 | - | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 79 | 911504 | 911752 | - | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 80 | 4024100 | 4024348 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 81 | 2009188 | 2009406 | + | NC_016627.1 | Acetivibrio clariflavus DSM 19732 |
| 82 | 1200289 | 1200507 | + | NZ_CP017253.2 | Clostridium taeniosporum |
| 83 | 1040223 | 1040471 | + | NZ_CP054058.1 | Scandinavium goeteborgense |
| 84 | 610556 | 610804 | + | NZ_CP040021.1 | Salinivibrio kushneri |
| 85 | 3692031 | 3692279 | - | NC_014500.1 | Dickeya dadantii 3937 |
| 86 | 1143245 | 1143493 | + | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 87 | 2816643 | 2816891 | - | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 88 | 2702401 | 2702649 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 89 | 5054790 | 5055038 | - | NZ_LT556085.1 | Citrobacter amalonaticus |
| 90 | 4392741 | 4392989 | + | NZ_CP067057.1 | Rahnella aceris |
| 91 | 3648175 | 3648423 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 92 | 1173841 | 1174089 | + | NZ_CP041247.1 | Raoultella electrica |
| 93 | 470623 | 470871 | - | NZ_CP026047.1 | Raoultella planticola |
| 94 | 1223189 | 1223437 | + | NZ_CP046672.1 | Raoultella ornithinolytica |
| 95 | 22608 | 22856 | - | NZ_LR134167.1 | Avibacterium volantium |
| 96 | 2250791 | 2251033 | - | NC_009253.1 | Desulfotomaculum reducens MI-1 |
| 97 | 3982972 | 3983223 | - | NC_011566.1 | Shewanella piezotolerans WP3 |
| 98 | 3558162 | 3558410 | - | NZ_CP027986.1 | Enterobacter sichuanensis |
| 99 | 3583374 | 3583622 | - | NZ_CP017184.1 | Enterobacter roggenkampii |
| 100 | 3561717 | 3561965 | - | NC_015968.1 | Enterobacter soli |
| 101 | 3685843 | 3686091 | + | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 102 | 3661859 | 3662107 | - | NZ_CP009756.1 | Enterobacter cloacae |
| 103 | 4841529 | 4841777 | + | NZ_CP045769.1 | Enterobacter cancerogenus |
| 104 | 3868906 | 3869154 | - | NZ_CP043318.1 | Enterobacter chengduensis |
| 105 | 1675518 | 1675793 | + | NZ_LR699119.1 | Aquicella siphonis |
| 106 | 3658774 | 3659025 | + | NZ_CP036200.1 | Shewanella maritima |
| 107 | 1796924 | 1797178 | - | NZ_CP041783.1 | Shewanella donghaensis |
| 108 | 129725 | 129973 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 109 | 862626 | 862874 | + | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 110 | 3257054 | 3257302 | - | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 111 | 668592 | 668840 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 112 | 3389518 | 3389766 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 113 | 914641 | 914889 | + | NZ_CP015425.1 | [Haemophilus] ducreyi |
| 114 | 3172699 | 3172950 | - | NZ_CP022272.1 | Shewanella marisflavi |
| 115 | 1706491 | 1706739 | - | NZ_LT906448.1 | Pasteurella dagmatis |
| 116 | 2967293 | 2967541 | - | NZ_LN907827.1 | Erwinia gerundensis |
| 117 | 1592985 | 1593236 | + | NC_010506.1 | Shewanella woodyi ATCC 51908 |
| 118 | 2527247 | 2527468 | - | NZ_CP028842.1 | Clostridium botulinum |
| 119 | 445941 | 446189 | + | NZ_AP014524.1 | Vibrio cholerae MS6 |
| 120 | 4134593 | 4134871 | - | NZ_CP053069.1 | Usitatibacter rugosus |
| 121 | 1089632 | 1089880 | + | NZ_AP023184.1 | Buttiauxella agrestis |
| 122 | 2264683 | 2264931 | + | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 123 | 1066579 | 1066827 | + | NZ_CP043727.1 | Yersinia canariae |
| 124 | 1217545 | 1217793 | + | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 125 | 4086971 | 4087219 | - | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 126 | 3889515 | 3889763 | + | NZ_CP009787.1 | Yersinia rohdei |
| 127 | 4838119 | 4838367 | + | NZ_CP017279.1 | Enterobacter ludwigii |
| 128 | 1212895 | 1213143 | + | NZ_CP054254.1 | Klebsiella variicola |
| 129 | 3078842 | 3079090 | - | NZ_CP032487.1 | Yersinia hibernica |
| 130 | 4472962 | 4473210 | + | NZ_CP028897.1 | Dongshaea marina |
| 131 | 1284293 | 1284541 | + | NZ_CP059565.1 | Neisseria wadsworthii |
| 132 | 73238 | 73486 | - | NZ_LR134313.1 | Neisseria canis |
| 133 | 1178480 | 1178728 | + | NZ_LR134475.1 | Klebsiella aerogenes |
| 134 | 548461 | 548709 | + | NZ_CP009056.1 | Frischella perrara |
| 135 | 2052354 | 2052602 | + | NZ_CP030753.1 | Actinobacillus pleuropneumoniae |
| 136 | 1707916 | 1708167 | - | NZ_CP011412.1 | Sedimenticola thiotaurini |
| 137 | 2407732 | 2407980 | + | NZ_CP065640.1 | Serratia rubidaea |
| 138 | 876261 | 876509 | + | NC_015567.1 | Serratia plymuthica AS9 |
| 139 | 825365 | 825613 | + | NZ_CP048784.1 | Serratia liquefaciens |
| 140 | 257527 | 257775 | + | NZ_CP020465.1 | Cognaticolwellia beringensis |
| 141 | 589190 | 589438 | + | NZ_CP031961.1 | Pseudoalteromonas tunicata |
| 142 | 2211647 | 2211865 | - | NZ_CP013019.1 | Clostridium pasteurianum |
| 143 | 2786382 | 2786645 | - | NC_021184.1 | Desulfoscipio gibsoniae DSM 7213 |
| 144 | 322398 | 322646 | - | NZ_CP046531.1 | Mannheimia ovis |
| 145 | 3108263 | 3108511 | + | NZ_CP011078.1 | Yersinia ruckeri |
| 146 | 873004 | 873252 | + | NZ_LR134494.1 | Serratia quinivorans |
| 147 | 2981829 | 2982077 | + | NZ_CP011254.1 | Serratia fonticola |
| 148 | 822070 | 822297 | - | NZ_CP009761.1 | Parvimonas micra |
| 149 | 3625420 | 3625668 | + | NZ_CP034759.1 | Litorilituus sediminis |
| 150 | 2279882 | 2280130 | - | NZ_CP023529.1 | Lelliottia amnigena |
| 151 | 783351 | 783599 | - | NZ_CP028926.1 | Pasteurella multocida |
| 152 | 1175556 | 1175807 | + | NZ_CP041036.1 | Shewanella polaris |
| 153 | 3876735 | 3876986 | - | NZ_CP034015.1 | Shewanella livingstonensis |
| 154 | 3509323 | 3509574 | - | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 155 | 1908389 | 1908637 | - | NZ_CP007715.1 | Actinobacillus equuli subsp. equuli |
| 156 | 1903087 | 1903335 | - | NZ_CP009159.1 | Actinobacillus suis ATCC 33415 |
| 157 | 3007980 | 3008228 | - | NZ_CP065534.1 | Lonsdalea populi |
| 158 | 3338091 | 3338339 | - | NZ_CP061511.1 | Mixta calida |
| 159 | 3549520 | 3549768 | - | NZ_CP026377.1 | Mixta gaviniae |
| 160 | 969536 | 969784 | + | NZ_LT906479.1 | Serratia ficaria |
| 161 | 868656 | 868904 | + | NZ_CP038662.1 | Serratia nematodiphila |
| 162 | 99995 | 100240 | + | NZ_CP007481.1 | Neorickettsia helminthoeca str. Oregon |
| 163 | 202384 | 202632 | + | NZ_CP035688.1 | Vibrio metoecus |
| 164 | 1036066 | 1036314 | + | NZ_CP048796.1 | Providencia vermicola |
| 165 | 668134 | 668382 | - | NZ_CP014056.2 | Grimontia hollisae |
| 166 | 2984507 | 2984755 | - | NZ_CP046268.1 | Vibrio spartinae |
| 167 | 2101106 | 2101348 | - | NZ_CP019698.1 | Desulfotomaculum ferrireducens |
| 168 | 965755 | 966000 | + | NZ_CP017689.1 | Thalassotalea crassostreae |
| 169 | 15320 | 15568 | + | NZ_CP015031.1 | Basfia succiniciproducens |
| 170 | 410569 | 410817 | + | NC_006300.1 | [Mannheimia] succiniciproducens MBEL55E |
| 171 | 1097495 | 1097743 | + | NZ_CP035129.1 | Kosakonia cowanii |
| 172 | 403318 | 403566 | - | NZ_CP029206.1 | Actinobacillus porcitonsillarum |
| 173 | 672836 | 673084 | + | NZ_CP009654.1 | Francisella frigiditurris |
| 174 | 3198832 | 3199089 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 175 | 548190 | 548438 | + | NZ_CP061280.1 | Mannheimia bovis |
| 176 | 350900 | 351148 | - | NZ_CP055305.1 | Mannheimia pernigra |
| 177 | 1056561 | 1056809 | + | NZ_CP015581.1 | Tatumella citrea |
| 178 | 4175148 | 4175396 | - | NZ_CP071320.1 | Serratia ureilytica |
| 179 | 197494 | 197742 | + | NZ_CP016948.1 | Serratia surfactantfaciens |
| 180 | 954362 | 954610 | + | NZ_CP072844.1 | Psychrosphaera aestuarii |
| 181 | 1775362 | 1775610 | - | NZ_CP014136.1 | Gibbsiella quercinecans |
| 182 | 2023117 | 2023365 | - | NZ_CP029347.1 | Saliniradius amylolyticus |
| 183 | 1124848 | 1125096 | + | NZ_CP045845.1 | Kluyvera intermedia |
| 184 | 4159147 | 4159395 | - | NC_008709.1 | Psychromonas ingrahamii 37 |
| 185 | 4142799 | 4143047 | - | NZ_AP022188.1 | Aeromonas media |
| 186 | 3318020 | 3318268 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 187 | 1456164 | 1456412 | + | NZ_CP036175.1 | Klebsiella huaxiensis |
| 188 | 3839760 | 3840008 | + | NZ_CP044060.1 | Aeromonas veronii |
| 189 | 1456067 | 1456315 | + | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 190 | 195414 | 195662 | + | NZ_CP006944.1 | Mannheimia varigena USDA-ARS-USMARC-1312 |
| 191 | 726388 | 726636 | - | NZ_CP053416.1 | Salmonella bongori |
| 192 | 3663346 | 3663594 | - | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 193 | 3668264 | 3668512 | + | NZ_CP044098.1 | Citrobacter portucalensis |
| 194 | 1437465 | 1437713 | - | NZ_CP033744.1 | Citrobacter freundii |
| 195 | 1783990 | 1784238 | + | NZ_CP045205.1 | Citrobacter telavivensis |
| 196 | 48074 | 48322 | - | NZ_CP023536.1 | Providencia alcalifaciens |
| 197 | 4122712 | 4122960 | - | NZ_CP029736.1 | Providencia rettgeri |
| 198 | 1470402 | 1470653 | + | NZ_CP020472.1 | Shewanella japonica |
| 199 | 3609261 | 3609512 | - | NZ_CP064781.1 | Azospira restricta |
| 200 | 451654 | 451902 | - | NZ_CP011104.1 | Photorhabdus thracensis |
| 201 | 4305676 | 4305924 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 202 | 3672458 | 3672706 | - | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 203 | 1303295 | 1303543 | + | NZ_CP014007.2 | Kosakonia oryzae |
| 204 | 3862524 | 3862772 | - | NZ_CP015113.1 | Kosakonia radicincitans |
| 205 | 1032848 | 1033096 | + | NZ_LS483422.1 | Providencia heimbachae |
| 206 | 1879313 | 1879528 | - | NZ_CP025197.1 | Acetivibrio saccincola |
| 207 | 2789733 | 2789954 | - | NZ_CP011663.1 | Clostridium sporogenes |
| 208 | 904660 | 904908 | + | NZ_CP013816.1 | Piscirickettsia salmonis |
| 209 | 1688663 | 1688881 | - | NZ_CP014204.2 | Clostridium baratii |
| 210 | 416800 | 417048 | + | NZ_CP031123.2 | Providencia huaxiensis |
| 211 | 3746580 | 3746828 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 212 | 2700641 | 2700886 | - | NZ_CP019870.1 | Clostridioides difficile |
| 213 | 580285 | 580530 | + | NC_013895.2 | Mageeibacillus indolicus UPII9-5 |
| 214 | 1272689 | 1272940 | + | NC_009901.1 | Shewanella pealeana ATCC 700345 |
| 215 | 1336495 | 1336746 | + | NC_010334.1 | Shewanella halifaxensis HAW-EB4 |
| 216 | 4089207 | 4089455 | + | NZ_CP065745.1 | Aeromonas allosaccharophila |
| 217 | 800243 | 800512 | - | NZ_LR699114.1 | Aquicella lusitana |
| 218 | 1807274 | 1807504 | - | NZ_CP014170.1 | Clostridium tyrobutyricum |
| 219 | 3672361 | 3672609 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 220 | 1270439 | 1270687 | - | NZ_CP046793.1 | Vibrio metschnikovii |
| 221 | 563361 | 563609 | + | NZ_CP010427.1 | Allofrancisella guangzhouensis |
| 222 | 913128 | 913376 | + | NZ_CP023525.1 | Cedecea neteri |
| 223 | 606358 | 606606 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 224 | 871828 | 872076 | + | NZ_LR134201.1 | Cedecea lapagei |
| 225 | 963964 | 964212 | + | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 226 | 580584 | 580832 | + | NZ_CP015029.1 | Frederiksenia canicola |
| 227 | 543484 | 543735 | + | NZ_CP012621.1 | Zobellella denitrificans |
| 228 | 3194865 | 3195104 | - | NZ_CP034413.2 | Dysosmobacter welbionis |
| 229 | 3358863 | 3359111 | - | NC_014532.2 | Halomonas elongata DSM 2581 |
| 230 | 3696008 | 3696256 | + | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 231 | 1844271 | 1844501 | + | NZ_CP040924.1 | Clostridium thermarum |
| 232 | 2933916 | 2934164 | - | NZ_CP015749.1 | Pectobacterium parmentieri |
| 233 | 2867311 | 2867559 | + | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 234 | 1396417 | 1396635 | + | NZ_CP043998.1 | Clostridium diolis |
| 235 | 1447493 | 1447711 | + | NC_020291.1 | Clostridium saccharoperbutylacetonicum N1-4(HMT) |
| 236 | 3775319 | 3775567 | - | NC_012962.1 | Photorhabdus asymbiotica |
| 237 | 1225680 | 1225931 | + | NC_009092.1 | Shewanella loihica PV-4 |
| 238 | 5051737 | 5051985 | - | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 239 | 2546670 | 2546888 | - | NZ_CP061336.1 | Ruminiclostridium herbifermentans |
| 240 | 1290788 | 1291036 | - | NZ_CP029331.1 | Thauera hydrothermalis |
| 241 | 2812872 | 2813120 | - | NZ_LR134531.1 | Pragia fontium |
| 242 | 558497 | 558745 | + | NZ_AP014635.1 | Vibrio tritonius |
| 243 | 2422921 | 2423169 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 244 | 705720 | 705968 | + | NZ_CP050851.1 | Aeromonas hydrophila |
| 245 | 189207 | 189455 | + | NZ_CP016414.1 | Vibrio scophthalmi |
| 246 | 2482882 | 2483130 | - | NZ_AP019657.1 | Vibrio ponticus |
| 247 | 3555477 | 3555725 | - | NZ_CP038498.1 | Pectobacterium punjabense |
| 248 | 2805322 | 2805570 | + | NZ_CP047495.1 | Pectobacterium brasiliense |
| 249 | 1151020 | 1151268 | + | NZ_CP051652.1 | Pectobacterium carotovorum |
| 250 | 3729759 | 3730007 | - | NZ_CP034938.1 | Pectobacterium odoriferum |
| 251 | 2514201 | 2514449 | - | NZ_CP017482.1 | Pectobacterium polaris |
| 252 | 246807 | 247055 | + | NZ_CP006954.1 | Bibersteinia trehalosi USDA-ARS-USMARC-188 |
| 253 | 368212 | 368463 | + | NZ_CP027432.2 | Caminibacter pacificus |
| 254 | 4348058 | 4348306 | + | NZ_CP045300.1 | Kosakonia arachidis |
| 255 | 469693 | 469941 | + | NZ_CP022741.1 | Vibrio qinghaiensis |
| 256 | 2905812 | 2906027 | - | NZ_CP015756.1 | Clostridium estertheticum subsp. estertheticum |
| 257 | 1185898 | 1186128 | + | NZ_CP020953.1 | Clostridium drakei |
| 258 | 147171 | 147401 | + | NZ_CP011803.1 | Clostridium carboxidivorans P7 |
| 259 | 577660 | 577908 | + | NZ_CP032093.1 | Vibrio alfacsensis |
| 260 | 2648644 | 2648892 | - | NZ_CP030788.1 | Vibrio campbellii |
| 261 | 391346 | 391594 | + | NZ_CP018312.1 | Vibrio rotiferianus |
| 262 | 535429 | 535677 | + | NZ_CP039700.1 | Vibrio cyclitrophicus |
| 263 | 3212286 | 3212534 | - | NZ_CP009467.1 | Vibrio harveyi |
| 264 | 1001090 | 1001338 | + | NZ_CP040990.1 | Vibrio furnissii |
| 265 | 1968708 | 1968956 | - | NZ_CP016605.1 | Bisgaardia hudsonensis |
| 266 | 1369546 | 1369794 | + | NZ_CP060111.1 | Klebsiella michiganensis |
| 267 | 1306509 | 1306757 | + | NZ_CP022358.1 | Shewanella bicestrii |
| 268 | 487649 | 487900 | + | NZ_CP020373.1 | Shewanella khirikhana |
| 269 | 4630128 | 4630376 | + | NZ_CP038469.1 | Citrobacter tructae |
| 270 | 1380135 | 1380386 | + | NC_009831.1 | Shewanella sediminis HAW-EB3 |
| 271 | 1284706 | 1284957 | + | NZ_CP037951.1 | Parashewanella tropica |
| 272 | 2772502 | 2772753 | - | NZ_CP014782.1 | Shewanella psychrophila |
| 273 | 3296386 | 3296637 | - | NC_007954.1 | Shewanella denitrificans OS217 |
| 274 | 228840 | 229088 | + | NC_021883.1 | Mannheimia haemolytica USMARC_2286 |
| 275 | 952655 | 952906 | + | NZ_CP069213.1 | Shewanella litorisediminis |
| 276 | 1078064 | 1078315 | + | NC_008700.1 | Shewanella amazonensis SB2B |
| 277 | 302678 | 302926 | - | NZ_CP022355.1 | Paraphotobacterium marinum |
| 278 | 2252954 | 2253202 | - | NZ_CP014035.2 | Vibrio fluvialis |
| 279 | 418482 | 418721 | + | NZ_AP014545.1 | Amphritea japonica ATCC BAA-1530 |
| 280 | 432029 | 432277 | + | NZ_CP009354.1 | Vibrio tubiashii ATCC 19109 |
| 281 | 2804315 | 2804563 | - | NZ_CP044069.1 | Vibrio vulnificus |
| 282 | 1005231 | 1005497 | + | NC_008340.1 | Alkalilimnicola ehrlichii MLHE-1 |
| 283 | 1120899 | 1121150 | + | NC_014012.1 | Shewanella violacea DSS12 |
| 284 | 2131986 | 2132234 | - | NZ_CP016176.1 | Xenorhabdus hominickii |
| 285 | 2794418 | 2794666 | - | NZ_CP051883.1 | Aeromonas salmonicida |
| 286 | 1166788 | 1167006 | - | NZ_CP016786.1 | Clostridium isatidis |
| 287 | 1050387 | 1050632 | + | NZ_LR134483.1 | Listeria grayi |
| 288 | 397390 | 397638 | + | NZ_AP019651.1 | Vibrio taketomensis |
| 289 | 1376885 | 1377127 | + | NZ_CP048649.1 | Aminipila butyrica |
| 290 | 2007624 | 2007872 | + | NZ_CP065150.1 | Vibrio kanaloae |
| 291 | 2747575 | 2747823 | - | NC_011753.2 | Vibrio atlanticus |
| 292 | 73251 | 73469 | - | NZ_CP067016.1 | Anaerococcus obesiensis |
| 293 | 2670278 | 2670526 | - | NZ_CP045350.1 | Vibrio aquimaris |
| 294 | 2432180 | 2432428 | + | NZ_CP019959.1 | Vibrio owensii |
| 295 | 2853980 | 2854228 | + | NZ_CP025792.1 | Vibrio jasicida 090810c |
| 296 | 1906142 | 1906390 | - | NC_011852.1 | Glaesserella parasuis SH0165 |
| 297 | 2520499 | 2520750 | - | NC_012969.1 | Methylovorus glucosetrophus SIP3-4 |
| 298 | 2693959 | 2694210 | + | NZ_CP028339.1 | Thauera aromatica K172 |
| 299 | 3226990 | 3227238 | - | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 300 | 1351561 | 1351779 | - | NZ_CP066014.1 | Anaerococcus vaginalis |
| 301 | 130943 | 131194 | + | NZ_CP051180.1 | Ferrimonas lipolytica |
| 302 | 3578827 | 3579075 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 303 | 2642094 | 2642342 | + | NZ_CP007230.1 | Yersinia similis |
| 304 | 1957375 | 1957623 | - | NZ_CP016604.1 | Otariodibacter oris |
| 305 | 1865776 | 1866024 | - | NZ_AP018689.1 | Vibrio aphrogenes |
| 306 | 1856451 | 1856699 | - | NC_006512.1 | Idiomarina loihiensis L2TR |
| 307 | 2787495 | 2787743 | - | NZ_LT960611.1 | Vibrio tapetis subsp. tapetis |
| 308 | 1368177 | 1368425 | - | NZ_CP038017.1 | Allofrancisella frigidaquae |
| 309 | 112915 | 113154 | + | NC_013009.1 | Neorickettsia risticii str. Illinois |
| 310 | 2299707 | 2299961 | - | NZ_CP049134.1 | Paraburkholderia tropica |
| 311 | 3925813 | 3926064 | - | NZ_CP037952.1 | Parashewanella spongiae |
| 312 | 2890617 | 2890862 | - | NZ_CP014150.1 | Paeniclostridium sordellii |
| 313 | 1198080 | 1198328 | + | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 314 | 6750510 | 6750764 | + | NZ_AP021875.1 | Desulfosarcina widdelii |
| 315 | 2018827 | 2019075 | - | NZ_AP018725.1 | Sulfuriflexus mobilis |
| 316 | 1133711 | 1133959 | - | NZ_CP025682.1 | Azoarcus pumilus |
| 317 | 2628766 | 2629014 | - | NZ_CP047475.1 | Vibrio astriarenae |
| 318 | 250371 | 250619 | + | NZ_CP009977.1 | Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 |
| 319 | 1025489 | 1025737 | + | NC_013456.1 | Vibrio antiquarius |
| 320 | 599991 | 600239 | + | NZ_CP031781.1 | Vibrio parahaemolyticus |
| 321 | 1659230 | 1659475 | + | NZ_CP015378.1 | Fictibacillus phosphorivorans |
| 322 | 1207686 | 1207931 | - | NZ_LT821227.1 | Phoenicibacter congonensis |
| 323 | 2111488 | 2111739 | - | NZ_CP014322.1 | Alteromonas addita |
| 324 | 2737914 | 2738165 | - | NC_015554.1 | Alteromonas naphthalenivorans |
| 325 | 768826 | 769074 | + | NZ_AP018685.1 | Vibrio rumoiensis |
| 326 | 2106598 | 2106849 | - | NZ_CP018839.1 | Thauera chlorobenzoica |
| 327 | 511504 | 511752 | + | NZ_AP022843.1 | Halomonas hydrothermalis |
| 328 | 513278 | 513526 | + | NZ_CP065135.1 | Halomonas venusta |
| 329 | 533882 | 534130 | + | NZ_CP048602.1 | Halomonas piezotolerans |
| 330 | 2289836 | 2290054 | + | NC_014393.1 | Clostridium cellulovorans 743B |
| 331 | 722872 | 723120 | + | NC_011312.1 | Aliivibrio salmonicida LFI1238 |
| 332 | 2147487 | 2147744 | - | NZ_CP014671.1 | Immundisolibacter cernigliae |
| 333 | 624521 | 624769 | + | NZ_LR134376.1 | Aeromonas encheleia |
| 334 | 1461703 | 1461954 | + | NZ_CP008849.1 | Alteromonas australica |
| 335 | 861005 | 861223 | + | NC_014657.1 | Caldicellulosiruptor owensensis OL |
| 336 | 3267245 | 3267496 | + | NZ_CP016210.1 | Azoarcus olearius |
| 337 | 1442475 | 1442705 | + | NC_011837.1 | Clostridium kluyveri NBRC 12016 |
| 338 | 531937 | 532188 | - | NZ_AP018721.1 | Sulfuritortus calidifontis |
| 339 | 1318098 | 1318346 | + | NC_016041.1 | Glaciecola nitratireducens FR1064 |
| 340 | 1530620 | 1530871 | + | NZ_CP059560.1 | Aromatoleum petrolei |
| 341 | 2432865 | 2433122 | - | NZ_CP045650.1 | Acinetobacter wanghuae |
| 342 | 2104733 | 2104981 | - | NZ_CP059603.1 | Levilactobacillus suantsaii |
| 343 | 188016 | 188234 | - | NZ_CP023671.1 | Clostridium septicum |
| 344 | 3250118 | 3250375 | - | NZ_CP032134.1 | Acinetobacter chinensis |
| 345 | 1278549 | 1278767 | + | NZ_CP027286.1 | Clostridium chauvoei |
| 346 | 2246776 | 2247039 | - | NZ_CP046909.1 | Paraburkholderia acidiphila |
| 347 | 503980 | 504231 | + | NZ_CP043869.1 | Neptunomonas concharum |
| 348 | 1221728 | 1221970 | - | NZ_CP027228.1 | Mogibacterium diversum |
| 349 | 325532 | 325789 | + | NZ_CP016895.1 | Acinetobacter larvae |
| 350 | 830593 | 830841 | + | NZ_CP019448.1 | Simonsiella muelleri ATCC 29453 |
| 351 | 377879 | 378136 | + | NZ_AP014630.1 | Acinetobacter guillouiae |
| 352 | 127196 | 127462 | + | NZ_CP031222.1 | Aquirhabdus parva |
| 353 | 2489241 | 2489489 | - | NC_007947.1 | Methylobacillus flagellatus KT |
| 354 | 539921 | 540169 | + | NZ_CP046027.1 | Neisseria brasiliensis |
| 355 | 1438092 | 1438325 | + | NZ_CP022121.1 | Dehalobacterium formicoaceticum |
| 356 | 1282262 | 1282513 | + | NZ_CP046670.1 | Alteromonas mediterranea |
| 357 | 58499 | 58741 | + | NZ_LR130778.1 | Petrocella atlantisensis |
| 358 | 1905122 | 1905367 | + | NC_015687.1 | Clostridium acetobutylicum DSM 1731 |
| 359 | 1573868 | 1574086 | + | NC_022571.1 | Clostridium saccharobutylicum DSM 13864 |
| 360 | 3625484 | 3625714 | + | NZ_CP012395.1 | Clostridium autoethanogenum DSM 10061 |
| 361 | 1389428 | 1389658 | + | NC_014328.1 | Clostridium ljungdahlii DSM 13528 |
| 362 | 2922376 | 2922624 | - | NZ_CP012033.1 | Levilactobacillus koreensis |
| 363 | 892458 | 892706 | + | NC_008260.1 | Alcanivorax borkumensis SK2 |
| 364 | 2210735 | 2210998 | - | NZ_CP046913.1 | Paraburkholderia acidisoli |
| 365 | 573126 | 573371 | + | NZ_CP059563.1 | Conchiformibius steedae |
| 366 | 1706384 | 1706632 | - | NZ_CP012418.1 | Kangiella sediminilitoris |
| 367 | 774850 | 775065 | - | NZ_HF545616.1 | Ruminococcus bicirculans |
| 368 | 2385421 | 2385672 | + | NZ_CP040105.1 | Acinetobacter nosocomialis M2 |
| 369 | 2822406 | 2822657 | - | NC_016603.1 | Acinetobacter pittii PHEA-2 |
| 370 | 2297746 | 2297997 | + | NZ_CP070518.1 | Acinetobacter calcoaceticus |
| 371 | 355533 | 355784 | + | NZ_CP053391.1 | Acinetobacter lactucae |
| 372 | 350456 | 350707 | + | NZ_CP015121.1 | Acinetobacter baumannii |
| 373 | 384007 | 384258 | + | NZ_CP065820.1 | Acinetobacter seifertii |
| 374 | 362673 | 362924 | + | NC_014259.1 | Acinetobacter oleivorans DR1 |
| 375 | 268633 | 268890 | - | NZ_CP071766.1 | Acinetobacter towneri |
| 376 | 2545887 | 2546150 | - | NZ_CP011367.1 | Thioalkalivibrio versutus |
| 377 | 173954 | 174172 | - | NZ_CP024333.1 | Borrelia miyamotoi |
| 378 | 1425270 | 1425515 | + | NZ_CP019699.1 | Novibacillus thermophilus |
| 379 | 1161472 | 1161690 | + | NZ_CP030775.1 | Clostridium butyricum |
| 380 | 24960 | 25208 | - | NZ_CP059564.1 | Alysiella filiformis |
| 381 | 4142274 | 4142528 | - | NZ_CP013236.1 | Collimonas pratensis |
| 382 | 1607271 | 1607495 | - | NZ_CP036523.1 | Peptacetobacter hiranonis |
| 383 | 1166474 | 1166731 | + | NZ_CP012808.1 | Acinetobacter equi |
| 384 | 417366 | 417623 | + | NZ_CP035934.2 | Acinetobacter cumulans |
| 385 | 1729300 | 1729554 | + | NZ_CP011930.1 | Herbaspirillum seropedicae |
| 386 | 1669968 | 1670213 | - | NC_022567.1 | Adlercreutzia equolifaciens DSM 19450 |
| 387 | 44364 | 44612 | - | NZ_LR134343.1 | Moraxella cuniculi |
| 388 | 2093172 | 2093420 | + | NZ_CP018139.1 | Halomonas aestuarii |
| 389 | 1862547 | 1862810 | + | NZ_CP015249.1 | Dokdonella koreensis DS-123 |
| 390 | 2077802 | 2078050 | - | NZ_CP016180.1 | Pasteurella skyensis |
| 391 | 1352827 | 1353072 | + | NZ_CP012024.1 | Bacillus smithii |
| 392 | 1036727 | 1036972 | - | NC_016605.1 | Pediococcus claussenii ATCC BAA-344 |
| 393 | 1646403 | 1646648 | + | NC_013204.1 | Eggerthella lenta DSM 2243 |
| 394 | 902869 | 903117 | + | NZ_CP005974.1 | Photobacterium gaetbulicola Gung47 |
| 395 | 3218930 | 3219187 | - | NC_005966.1 | Acinetobacter baylyi ADP1 |
| 396 | 548957 | 549199 | - | NC_016893.1 | Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) |
| 397 | 3082079 | 3082309 | - | NZ_CP009933.1 | Clostridium scatologenes |
| 398 | 1846186 | 1846443 | + | NZ_CP014234.1 | Moraxella osloensis |
| 399 | 866892 | 867143 | + | NZ_CP070624.1 | Photobacterium damselae subsp. damselae |
| 400 | 1219060 | 1219320 | + | NC_013216.1 | Desulfofarcimen acetoxidans DSM 771 |
| 401 | 551071 | 551319 | + | NZ_CP071325.1 | Photobacterium ganghwense |
| 402 | 3452691 | 3452948 | + | NZ_CP041970.1 | Acinetobacter dispersus |
| 403 | 3081045 | 3081302 | - | NZ_CP029397.2 | Acinetobacter defluvii |
| 404 | 438237 | 438497 | - | NZ_CP013742.1 | Legionella pneumophila |
| 405 | 339911 | 340168 | + | NZ_CP044483.1 | Acinetobacter schindleri |
| 406 | 314299 | 314556 | + | NZ_CP030880.1 | Acinetobacter haemolyticus |
| 407 | 2526675 | 2526890 | - | NC_015275.1 | Cellulosilyticum lentocellum DSM 5427 |
| 408 | 851024 | 851266 | + | NZ_CP030777.1 | Faecalibacterium prausnitzii |
| 409 | 1072626 | 1072880 | + | NZ_CP062803.1 | Cupriavidus basilensis |
| 410 | 2336967 | 2337215 | - | NZ_CP059569.1 | Kingella oralis |
| 411 | 2149159 | 2149422 | - | NZ_CP029640.1 | Paraburkholderia dokdonella |
| 412 | 2931751 | 2931996 | - | NZ_CP022657.1 | Tumebacillus algifaecis |
| 413 | 1501319 | 1501564 | + | NZ_CP040336.1 | Bacillus luti |
| 414 | 3658378 | 3658623 | - | NC_007530.2 | Bacillus anthracis str. 'Ames Ancestor' |
| 415 | 3727923 | 3728168 | - | NZ_CP064875.1 | Bacillus toyonensis |
| 416 | 3862973 | 3863218 | - | NC_011725.1 | Bacillus cereus B4264 |
| 417 | 3867215 | 3867460 | - | NZ_CP032365.1 | Bacillus wiedmannii |
| 418 | 1229503 | 1229769 | - | NZ_AP019755.1 | Nitrosomonas stercoris |
| 419 | 367499 | 367756 | + | NZ_CP024632.1 | Acinetobacter junii |
| 420 | 1837364 | 1837606 | - | NZ_CP041730.1 | Chitinimonas arctica |
| 421 | 3434205 | 3434450 | + | NZ_CP021434.1 | Tumebacillus avium |
| 422 | 1487224 | 1487442 | - | NZ_LR590481.1 | Hathewaya histolytica |
| 423 | 6505701 | 6505949 | + | NZ_CP040017.1 | Massilia umbonata |
| 424 | 5242265 | 5242513 | - | NZ_CP036401.1 | Massilia albidiflava |
| 425 | 1715495 | 1715749 | + | NZ_CP037993.1 | Herbaspirillum huttiense |
| 426 | 1589251 | 1589502 | + | NZ_CP013232.1 | Collimonas fungivorans |
| 427 | 2044505 | 2044750 | + | NZ_CP028324.1 | Massilia armeniaca |
| 428 | 880854 | 881105 | + | NZ_CP054626.1 | Cupriavidus gilardii |
| 429 | 1590348 | 1590602 | + | NZ_CP013737.1 | Herbaspirillum rubrisubalbicans M1 |
| 430 | 3185277 | 3185531 | - | NZ_CP011568.3 | Pandoraea thiooxydans |
| 431 | 3365572 | 3365823 | - | NZ_CP013235.1 | Collimonas arenae |
| 432 | 5632936 | 5633184 | + | NZ_CP019038.1 | Massilia putida |
| 433 | 1789139 | 1789384 | - | NZ_CP038012.1 | Sporosarcina pasteurii |
| 434 | 2540574 | 2540819 | - | NZ_CP017560.1 | Sporosarcina ureilytica |
| 435 | 3769127 | 3769381 | - | NZ_CP037867.1 | Hydrogenophaga pseudoflava |
| 436 | 345229 | 345474 | + | NZ_CP011381.2 | Moraxella bovoculi |
| 437 | 390874 | 391119 | + | NZ_CP011158.1 | Moraxella ovis |
| 438 | 1088496 | 1088747 | + | NZ_CP019240.1 | Rhodoferax antarcticus |
| 439 | 2140720 | 2140941 | - | NZ_CP014223.1 | Anaerotignum propionicum DSM 1682 |
| 440 | 515702 | 515947 | + | NZ_CP065728.1 | Moraxella nonliquefaciens |
| 441 | 362146 | 362391 | + | NZ_CP030241.1 | Moraxella bovis |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_004545.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00448.24 | 0.73 | 323 | 211.0 | same-strand | SRP54-type protein, GTPase domain |
| 2 | PF02978.21 | 0.73 | 323 | 181.0 | same-strand | Signal peptide binding domain |
| 3 | PF02881.21 | 0.73 | 323 | 211 | same-strand | SRP54-type protein, helical bundle domain |
| 4 | PF01782.20 | 0.99 | 435 | 24.0 | same-strand | RimM N-terminal domain |
| 5 | PF05239.18 | 0.96 | 424 | 24 | same-strand | PRC-barrel domain |
| 6 | PF01746.23 | 0.97 | 429 | 606.0 | same-strand | tRNA (Guanine-1)-methyltransferase |
| 7 | PF01245.22 | 0.95 | 416 | 1410 | same-strand | Ribosomal protein L19 |
++ More..