Result : Q83N02
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Acyl carrier protein (ACP) |
| NCBI Accession ID | AE014184.1 |
| Organism | Tropheryma whipplei (strain Twist) (Whipple's bacillus) |
| Left | 334903 |
| Right | 335151 |
| Strand | - |
| Nucleotide Sequence | GTGTCTTTATCAAGGGAGAAAGTTCTCGAAAGTATTGCCCAGATTGTTCATGATGAAACTGGGATAGATAAAGGTAGTGTCCAGCTCGACAAGGCATTCGTTGATGATTTAGATATAGATTCAATTTCCATGATGACGATAGTTGTCAATGCTGAGGAGAAGTACGGTATAGAAATTCCCGACGATAAGGTCAGGGAATTGCGTACGGTGGGTGATGCCGTTGACTTTATTATTGCTGCCAAGGCATAA |
| Sequence | MSLSREKVLESIAQIVHDETGIDKGSVQLDKAFVDDLDIDSISMMTIVVNAEEKYGIEIPDDKVRELRTVGDAVDFIIAAKA |
| Source of smORF | Swiss-Prot |
| Function | Carrier of the growing fatty acid chain in fatty acid biosynthesis. {ECO:0000255|HAMAP-Rule:MF_01217}. |
| Pubmed ID | 12902375 |
| Domain | CDD:415812 |
| Functional Category | Others |
| Uniprot ID | Q83N02 |
| ORF Length (Amino Acid) | 82 |
++ More..
| Conservation Analysis |
No. of Species: 143
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 334903 | 335151 | - | NC_004572.3 | Tropheryma whipplei str. Twist |
| 2 | 1889153 | 1889401 | - | NZ_CP016282.1 | Cryobacterium arcticum |
| 3 | 388476 | 388724 | + | NZ_CP030033.1 | Cryobacterium soli |
| 4 | 1833425 | 1833673 | + | NZ_CP047186.1 | Rathayibacter tanaceti |
| 5 | 2546664 | 2546912 | + | NZ_CP047180.1 | Rathayibacter festucae |
| 6 | 466465 | 466710 | - | NZ_AP017457.1 | Aurantimicrobium minutum |
| 7 | 2374911 | 2375159 | + | NZ_CP013979.1 | Agromyces aureus |
| 8 | 3499066 | 3499314 | + | NZ_CP032624.1 | Gryllotalpicola protaetiae |
| 9 | 2110159 | 2110407 | + | NZ_CP020715.1 | Cnuibacter physcomitrellae |
| 10 | 1484864 | 1485112 | - | NZ_CP028913.1 | Agromyces badenianii |
| 11 | 1664012 | 1664260 | + | NZ_CP026949.1 | Mycetocola zhujimingii |
| 12 | 1656473 | 1656721 | - | NZ_CP071883.1 | Curtobacterium flaccumfaciens pv. flaccumfaciens |
| 13 | 657017 | 657262 | - | NZ_CP007490.1 | Rhodoluna lacicola |
| 14 | 2083932 | 2084180 | - | NZ_CP017146.1 | Marisediminicola antarctica |
| 15 | 1490034 | 1490237 | - | NZ_CP034412.1 | Glutamicibacter creatinolyticus |
| 16 | 1006910 | 1007113 | - | NC_012803.1 | Micrococcus luteus NCTC 2665 |
| 17 | 1467916 | 1468161 | + | NZ_CP038256.1 | Microbacterium sediminis |
| 18 | 2068933 | 2069181 | + | NZ_CP049934.1 | Leucobacter insecticola |
| 19 | 1765957 | 1766205 | + | NZ_CP015515.1 | Rathayibacter tritici |
| 20 | 1756584 | 1756832 | - | NZ_CP031422.1 | Microbacterium oxydans |
| 21 | 763254 | 763499 | + | NZ_CP040508.1 | Rhodoluna limnophila |
| 22 | 1621510 | 1621758 | + | NZ_CP049933.1 | Leucobacter coleopterorum |
| 23 | 72823 | 73071 | - | NZ_CP035806.1 | Leucobacter triazinivorans |
| 24 | 324135 | 324383 | + | NZ_CP049863.1 | Leucobacter viscericola |
| 25 | 1606103 | 1606351 | - | NZ_CP035037.1 | Leucobacter muris |
| 26 | 2774798 | 2775046 | + | NZ_CP035491.1 | Agromyces protaetiae |
| 27 | 1137284 | 1137532 | - | NZ_CP058670.1 | Chryseoglobus indicus |
| 28 | 4335185 | 4335430 | + | NZ_CP018863.1 | Arthrobacter crystallopoietes |
| 29 | 2004658 | 2004906 | + | NZ_CP031425.1 | Microbacterium foliorum |
| 30 | 1804613 | 1804861 | - | NZ_CP033724.1 | Clavibacter michiganensis subsp. michiganensis |
| 31 | 1202315 | 1202563 | + | NZ_CP028130.1 | Rathayibacter iranicus |
| 32 | 1776609 | 1776857 | + | NZ_CP044231.1 | Microbacterium caowuchunii |
| 33 | 1110196 | 1110396 | - | NZ_CP061538.1 | Rothia amarae |
| 34 | 2610852 | 2611097 | - | NZ_CP032630.1 | Protaetiibacter intestinalis |
| 35 | 1466716 | 1466964 | + | NZ_CP028129.1 | Rathayibacter rathayi |
| 36 | 1311502 | 1311753 | + | NC_022438.1 | Leifsonia xyli subsp. cynodontis DSM 46306 |
| 37 | 375095 | 375343 | - | NZ_CP060716.1 | Leucobacter denitrificans |
| 38 | 1690504 | 1690749 | - | NZ_CP033081.1 | Glutamicibacter nicotianae |
| 39 | 2317716 | 2317964 | + | NC_014830.1 | Intrasporangium calvum DSM 43043 |
| 40 | 928571 | 928786 | - | NC_010168.1 | Renibacterium salmoninarum ATCC 33209 |
| 41 | 1797727 | 1797972 | + | NZ_LR131272.1 | Arthrobacter agilis |
| 42 | 2648921 | 2649166 | + | NZ_CP068013.1 | Paenarthrobacter ureafaciens |
| 43 | 1911900 | 1912148 | + | NZ_CP044232.1 | Microbacterium lushaniae |
| 44 | 1963086 | 1963334 | + | NZ_CP038266.1 | Microbacterium wangchenii |
| 45 | 1120898 | 1121143 | - | NZ_CP061539.1 | Rothia terrae |
| 46 | 429841 | 430068 | - | NZ_CP018135.1 | Neomicrococcus aestuarii |
| 47 | 1949866 | 1950114 | - | NZ_CP018762.1 | Microbacterium aurum |
| 48 | 3443317 | 3443565 | + | NZ_CP035494.1 | Microbacterium protaetiae |
| 49 | 1315876 | 1316124 | - | NZ_CP031421.1 | Microbacterium oleivorans |
| 50 | 1759142 | 1759387 | - | NC_014550.1 | Glutamicibacter arilaitensis Re117 |
| 51 | 369058 | 369306 | - | NZ_CP049253.1 | Microbacterium amylolyticum |
| 52 | 1725049 | 1725297 | + | NZ_CP064760.1 | Microbacterium schleiferi |
| 53 | 3101602 | 3101850 | + | NZ_CP041694.1 | Cellulosimicrobium cellulans |
| 54 | 2152834 | 2153049 | + | NZ_CP013745.1 | Arthrobacter alpinus |
| 55 | 1599314 | 1599559 | + | NZ_CP031423.1 | Microbacterium lemovicicum |
| 56 | 434135 | 434380 | - | NZ_CP042260.1 | Glutamicibacter halophytocola |
| 57 | 2724940 | 2725185 | + | NZ_CP013254.1 | Kocuria flava |
| 58 | 583045 | 583293 | + | NZ_LN849456.1 | Devriesea agamarum |
| 59 | 2005891 | 2006133 | + | NC_014643.1 | Rothia dentocariosa ATCC 17931 |
| 60 | 3288233 | 3288448 | + | NZ_CP029642.1 | Arthrobacter dokdonellae |
| 61 | 2879583 | 2879831 | - | NZ_CP049255.1 | Microbacterium endophyticum |
| 62 | 1161382 | 1161630 | - | NZ_CP012117.1 | Dermabacter vaginalis |
| 63 | 3080258 | 3080506 | - | NZ_CP061344.1 | Microbacterium hominis |
| 64 | 3634780 | 3634983 | - | NC_009664.2 | Kineococcus radiotolerans SRS30216 = ATCC BAA-149 |
| 65 | 1964551 | 1964802 | + | NZ_CP013290.1 | Janibacter indicus |
| 66 | 1322551 | 1322754 | + | NZ_CP011005.1 | Psychromicrobium lacuslunae |
| 67 | 1055732 | 1055971 | - | NZ_CP056080.1 | Rothia nasimurium |
| 68 | 2013939 | 2014187 | + | NZ_CP044427.1 | Ornithinimicrobium pratense |
| 69 | 1096935 | 1097135 | + | NZ_LR134479.1 | Rothia aeria |
| 70 | 315131 | 315379 | - | NZ_CP014209.1 | Isoptericola dokdonensis DS-3 |
| 71 | 1061427 | 1061630 | - | NZ_CP012507.1 | Kocuria palustris |
| 72 | 2298928 | 2299176 | + | NC_013530.1 | Xylanimonas cellulosilytica DSM 15894 |
| 73 | 1530350 | 1530601 | - | NZ_CP039291.1 | Cellulomonas shaoxiangyii |
| 74 | 491777 | 492025 | - | NZ_CP044548.2 | Janibacter melonis |
| 75 | 2067550 | 2067798 | - | NC_012669.1 | Beutenbergia cavernae DSM 12333 |
| 76 | 1204367 | 1204570 | - | NZ_CP035504.1 | Kocuria indica |
| 77 | 2769609 | 2769854 | + | NZ_CP040635.1 | Acidipropionibacterium jensenii |
| 78 | 2290962 | 2291210 | + | NZ_CP038213.1 | Ornithinimicrobium flavum |
| 79 | 1457347 | 1457595 | + | NZ_CP035495.1 | Xylanimonas allomyrinae |
| 80 | 1936475 | 1936723 | + | NZ_CP040887.1 | Serinicoccus chungangensis |
| 81 | 1887422 | 1887670 | - | NZ_CP023564.1 | Brachybacterium ginsengisoli |
| 82 | 197809 | 198057 | + | NZ_CP022316.1 | Brachybacterium avium |
| 83 | 1882617 | 1882865 | + | NC_013172.1 | Brachybacterium faecium DSM 4810 |
| 84 | 2332912 | 2333160 | - | NZ_CP023563.1 | Brachybacterium vulturis |
| 85 | 2705803 | 2706054 | - | NZ_CP065682.1 | Brevibacterium casei |
| 86 | 123234 | 123482 | - | NZ_CP014989.1 | Serinicoccus hydrothermalis |
| 87 | 871128 | 871373 | - | NZ_CP026923.1 | Pontimonas salivibrio |
| 88 | 922490 | 922735 | + | NZ_CP038267.1 | Nocardioides euryhalodurans |
| 89 | 1855130 | 1855381 | - | NZ_CP026734.1 | Brevibacterium linens |
| 90 | 1484071 | 1484319 | - | NC_015671.1 | Cellulomonas gilvus ATCC 13127 |
| 91 | 2777244 | 2777444 | + | NC_016109.1 | Kitasatospora setae KM-6054 |
| 92 | 2012753 | 2013004 | - | NZ_CP025333.1 | Brevibacterium aurantiacum |
| 93 | 912533 | 912784 | + | NZ_CP035810.1 | Brevibacterium luteolum |
| 94 | 968883 | 969137 | - | NC_008578.1 | Acidothermus cellulolyticus 11B |
| 95 | 2006873 | 2007118 | + | NZ_CP025198.1 | Acidipropionibacterium virtanenii |
| 96 | 1285201 | 1285449 | + | NZ_CP031356.1 | Brachybacterium saurashtrense |
| 97 | 3911349 | 3911594 | + | NZ_CP015079.1 | Nocardioides dokdonensis FR1436 |
| 98 | 1759652 | 1759903 | - | NZ_LT906453.1 | Dermatophilus congolensis |
| 99 | 2401000 | 2401248 | + | NC_014151.1 | Cellulomonas flavigena DSM 20109 |
| 100 | 2764562 | 2764810 | - | NZ_CP011112.1 | Luteipulveratus mongoliensis |
| 101 | 1224156 | 1224404 | - | NZ_CP051884.1 | Cellulomonas taurus |
| 102 | 239998 | 240243 | - | NZ_CP019400.1 | Acidipropionibacterium acidipropionici |
| 103 | 1298359 | 1298610 | - | NZ_CP033325.1 | Georgenia faecalis |
| 104 | 5159408 | 5159656 | - | NZ_CP023701.1 | Streptomyces subrutilus |
| 105 | 1641292 | 1641537 | - | NZ_CP049257.1 | Nocardioides anomalus |
| 106 | 1586038 | 1586286 | - | NC_013521.1 | Sanguibacter keddieii DSM 10542 |
| 107 | 2443326 | 2443574 | + | NZ_CP023693.1 | Streptomyces cinereoruber |
| 108 | 6345566 | 6345814 | - | NZ_CP045643.1 | Streptomyces fagopyri |
| 109 | 6013149 | 6013397 | - | NZ_CP026652.1 | Streptomyces dengpaensis |
| 110 | 2067549 | 2067797 | + | NC_015588.1 | Isoptericola variabilis 225 |
| 111 | 2507673 | 2507921 | + | NC_015514.1 | Cellulomonas fimi ATCC 484 |
| 112 | 1625130 | 1625369 | - | NC_019673.1 | Saccharothrix espanaensis DSM 44229 |
| 113 | 6952956 | 6953204 | - | NZ_CP043661.1 | Kribbella qitaiheensis |
| 114 | 3786257 | 3786505 | + | NZ_CP065050.1 | Streptomyces solisilvae |
| 115 | 1899827 | 1900069 | + | NZ_CP031264.1 | Streptacidiphilus bronchialis |
| 116 | 537515 | 537760 | - | NZ_CP044344.1 | Nocardioides cynanchi |
| 117 | 1487377 | 1487616 | - | NZ_CP045929.1 | Saccharopolyspora coralli |
| 118 | 3541774 | 3541974 | - | NZ_CP053564.1 | Pseudonocardia broussonetiae |
| 119 | 5155800 | 5156039 | - | NZ_CP061007.1 | Saccharopolyspora spinosa |
| 120 | 3109638 | 3109883 | - | NZ_CP038436.1 | Nocardioides seonyuensis |
| 121 | 2687624 | 2687872 | - | NC_013729.1 | Kribbella flavida DSM 17836 |
| 122 | 822175 | 822420 | - | NZ_CP059164.1 | Nocardioides ungokensis |
| 123 | 2727624 | 2727866 | - | NZ_CP012752.1 | Kibdelosporangium phytohabitans |
| 124 | 1608449 | 1608694 | - | NZ_CP016353.1 | Prauserella marina |
| 125 | 4907190 | 4907429 | + | NZ_CP031142.1 | Saccharopolyspora pogona |
| 126 | 2277284 | 2277526 | - | NC_015312.1 | Pseudonocardia dioxanivorans CB1190 |
| 127 | 2135833 | 2136075 | - | NZ_AP018920.1 | Pseudonocardia autotrophica |
| 128 | 5252209 | 5252454 | - | NZ_CP023698.1 | Streptomyces viridifaciens |
| 129 | 4519962 | 4520237 | - | NZ_LS483468.1 | Rhodococcus coprophilus |
| 130 | 1065584 | 1065799 | - | NC_006085.1 | Cutibacterium acnes KPA171202 |
| 131 | 439459 | 439707 | + | NZ_CP060713.1 | Nocardioides mesophilus |
| 132 | 1672288 | 1672527 | - | NC_009142.1 | Saccharopolyspora erythraea NRRL 2338 |
| 133 | 4152289 | 4152537 | + | NC_007777.1 | Frankia casuarinae |
| 134 | 1374350 | 1374595 | - | NZ_LT906441.1 | Cutibacterium granulosum |
| 135 | 1503013 | 1503258 | + | NZ_CP041091.1 | Nocardioides sambongensis |
| 136 | 3766287 | 3766517 | + | NZ_AP023172.1 | Rhodococcus qingshengii |
| 137 | 1285803 | 1286045 | + | NZ_LT985188.1 | Micropruina glycogenica |
| 138 | 3310808 | 3311053 | + | NZ_CP022295.1 | Nocardioides aromaticivorans |
| 139 | 5521354 | 5521599 | - | NZ_CP041146.1 | Nocardioides humi |
| 140 | 3800404 | 3800649 | + | NZ_CP009896.1 | Pimelobacter simplex |
| 141 | 577032 | 577268 | + | NZ_CP016793.1 | Lentzea guizhouensis |
| 142 | 1484310 | 1484561 | + | NZ_LT593929.1 | Propionibacterium freudenreichii |
| 143 | 6010590 | 6010838 | + | NZ_CP016076.1 | Actinoalloteichus fjordicus |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP016282.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF11343.10 | 0.85 | 122 | 1533.5 | opposite-strand | Protein of unknown function (DUF3145) |
| 2 | PF00109.28 | 0.99 | 141 | 86 | same-strand | Beta-ketoacyl synthase, N-terminal domain |
| 3 | PF02801.24 | 0.96 | 137 | 86 | same-strand | Beta-ketoacyl synthase, C-terminal domain |
| 4 | PF08541.12 | 0.95 | 136 | 80.5 | same-strand | 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal |
| 5 | PF08545.12 | 0.95 | 136 | 80.5 | same-strand | 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III |
| 6 | PF17831.3 | 0.69 | 99 | 3388 | same-strand | Pyruvate dehydrogenase E1 component middle domain |
| 7 | PF00698.23 | 0.81 | 116 | 1101.5 | same-strand | Acyl transferase domain |
| 8 | PF13556.8 | 0.9 | 128 | 2158.5 | same-strand | PucR C-terminal helix-turn-helix domain |
| 9 | PF17853.3 | 0.89 | 127 | 2159 | same-strand | GGDEF-like domain |
++ More..