ProsmORF-pred
Result : Q83EQ8
Protein Information
Information Type Description
Protein name 50S ribosomal protein L30
NCBI Accession ID AE016828.3
Organism Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Left 233280
Right 233471
Strand +
Nucleotide Sequence ATGGTGCAAGAAAAAAAATTACGTGTCACGCTGGTAAAAAGCAAGTACGGTCGAAAACCGGGGCACCGTGAATGTATAGAAGGTCTCGGTTTGCGTCGAATGCACCAAACCGTCGAGGTTACAGACACCCCGGCTAACCGTGGCATGATTGAGAAAGTGTCTTATCTCTTAATGATTGACGAGGAAGTGTAG
Sequence MVQEKKLRVTLVKSKYGRKPGHRECIEGLGLRRMHQTVEVTDTPANRGMIEKVSYLLMIDEEV
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl00203. Profile Description: N/A. This family includes prokaryotic L30 and eukaryotic L7.
Pubmed ID 12704232
Domain CDD:412218
Functional Category Ribosomal_protein
Uniprot ID Q83EQ8
ORF Length (Amino Acid) 63
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 457
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 233280 233471 + NC_002971.4 Coxiella burnetii RSA 493
2 443885 444070 + NZ_CP054020.1 Thiomicrorhabdus xiamenensis
3 387173 387361 + NZ_AP020335.1 Hydrogenovibrio marinus
4 175784 175972 + NZ_CP007030.1 Thiomicrospira aerophila AL3
5 370399 370587 + NZ_CP040602.1 Thiomicrorhabdus sediminis
6 2393500 2393685 - NZ_AP021889.1 Thiosulfatimonas sediminis
7 140281 140469 + NC_015581.1 Thiomicrospira cyclica ALM1
8 462152 462340 + NZ_CP033040.1 Thiomicrorhabdus indica
9 367616 367804 + NZ_AP018722.1 Thiomicrorhabdus aquaedulcis
10 584971 585159 + NZ_AP021888.1 Thiosulfativibrio zosterae
11 453711 453899 + NZ_CP035033.1 Hydrogenovibrio thermophilus
12 1514155 1514343 - NC_021291.1 Spiribacter salinus M19-40
13 840249 840437 + NZ_LR134365.1 Cardiobacterium hominis
14 2425578 2425766 - NZ_AP017372.2 Halorhodospira halochloris
15 919017 919205 - NC_008789.1 Halorhodospira halophila SL1
16 3294880 3295053 - NZ_CP012373.2 Beggiatoa leptomitoformis
17 1164794 1164982 + NZ_CP016268.1 Woeseia oceani
18 3855245 3855403 - NC_016112.1 Methylotuvimicrobium alcaliphilum 20Z
19 698548 698709 + NZ_AP021884.1 Sulfuriferula plumbiphila
20 2338148 2338339 - NC_014315.1 Nitrosococcus watsonii C-113
21 836688 836846 + NZ_CP035467.1 Methylotuvimicrobium buryatense
22 1999902 2000063 + NZ_CP018632.1 Granulosicoccus antarcticus IMCC3135
23 2656420 2656611 - NC_007484.1 Nitrosococcus oceani ATCC 19707
24 517267 517452 + NZ_AP018738.1 Ferriphaselus amnicola
25 1899836 1899991 + NZ_CP038033.1 Nitrosococcus wardiae
26 645018 645206 + NZ_AP018724.1 Sulfurivermis fontis
27 2470889 2471080 + NC_013960.1 Nitrosococcus halophilus Nc 4
28 2350967 2351152 + NZ_CP019448.1 Simonsiella muelleri ATCC 29453
29 1105162 1105347 + NZ_CP031699.1 Neisseria animalis
30 3080947 3081129 - NZ_CP022579.1 Oryzomicrobium terrae
31 2394171 2394326 - NZ_AP018725.1 Sulfuriflexus mobilis
32 3133694 3133885 - NC_019940.1 Thioflavicoccus mobilis 8321
33 1722642 1722827 - NZ_CP021520.1 Neisseria meningitidis
34 1906333 1906518 - NZ_CP031253.1 Neisseria lactamica
35 584037 584222 + NZ_CP068345.1 Succinivibrio dextrinosolvens
36 779307 779468 + NC_013959.1 Sideroxydans lithotrophicus ES-1
37 624648 624836 + NZ_CP031093.1 Hydrocarboniclastica marina
38 554165 554323 + NZ_CP043929.1 Methylomonas rhizoryzae
39 1655976 1656164 - NC_022664.1 Spiribacter curvatus
40 296425 296580 + NC_007947.1 Methylobacillus flagellatus KT
41 572706 572861 + NZ_AP021881.1 Sulfuriferula nivalis
42 2288519 2288704 - NZ_CP013816.1 Piscirickettsia salmonis
43 1786452 1786637 - NZ_CP039887.1 Neisseria subflava
44 1960504 1960689 + NZ_CP039886.1 Neisseria flavescens
45 1270818 1271003 + NZ_CP046027.1 Neisseria brasiliensis
46 1086892 1087077 + NZ_CP041335.1 Chitinolyticbacter meiyuanensis
47 1153706 1153891 + NZ_LR134313.1 Neisseria canis
48 1203960 1204145 + NZ_CP059565.1 Neisseria wadsworthii
49 2653101 2653283 - NZ_CP013189.1 Pseudohongiella spirulinae
50 2900257 2900442 + NZ_CP029822.1 Entomomonas moraniae
51 2102590 2102775 - NZ_CP059567.1 Neisseria shayeganii
52 349767 349940 + NZ_AP012273.1 Thiolapillus brandeum
53 284690 284875 - NZ_CP059563.1 Conchiformibius steedae
54 1059201 1059386 + NZ_CP012028.1 Neisseria gonorrhoeae
55 5635237 5635425 - NZ_CP048878.1 Spartinivicinus ruber
56 4084554 4084739 + NZ_CP043473.1 Chromobacterium paludis
57 2217199 2217384 + NZ_CP029495.1 Chromobacterium phragmitis
58 578508 578693 + NZ_CP059564.1 Alysiella filiformis
59 932209 932394 - NZ_CP031325.1 Neisseria polysaccharea
60 491188 491370 + NZ_CP029331.1 Thauera hydrothermalis
61 4218721 4218879 - NC_015572.1 Methylomonas methanica MC09
62 1952647 1952832 - NZ_CP072524.1 Neisseria sicca
63 2732804 2732992 - NZ_CP072793.1 Thiothrix unzii
64 4506662 4506847 - NC_005085.1 Chromobacterium violaceum ATCC 12472
65 3573888 3574073 + NZ_CP017707.1 Chromobacterium vaccinii
66 435354 435539 + NZ_AP019312.1 Chromobacterium haemolyticum
67 1369186 1369371 + NZ_LR134533.1 Neisseria weaveri
68 1699349 1699534 + NZ_LS483369.1 Neisseria cinerea
69 2435462 2435650 - NC_011901.1 Thioalkalivibrio sulfidiphilus HL-EbGr7
70 3201091 3201249 + NZ_CP014476.1 Methylomonas denitrificans
71 514454 514639 + NZ_CP010427.1 Allofrancisella guangzhouensis
72 2179037 2179222 - NZ_CP059569.1 Kingella oralis
73 2700417 2700581 - NZ_CP012154.1 Wenzhouxiangella marina
74 2997024 2997206 + NZ_CP048711.1 Kineobactrum salinum
75 2373890 2374075 - NZ_CP007446.1 Snodgrassella alvi wkB2
76 1854591 1854776 - NZ_CP041730.1 Chitinimonas arctica
77 822389 822580 + NZ_CP007031.1 Marichromatium purpuratum 984
78 3265944 3266123 + NZ_CP037953.1 Permianibacter aggregans
79 754643 754831 + NZ_CP021425.1 Oleiphilus messinensis
80 526351 526539 + NC_008340.1 Alkalilimnicola ehrlichii MLHE-1
81 2492715 2492900 - NZ_LT906434.1 Neisseria zoodegmatis
82 1224736 1224921 + NZ_LT906482.1 Eikenella corrodens
83 2247712 2247879 - NZ_CP046415.1 Guyparkeria halophila
84 3820690 3820872 - NZ_CP016210.1 Azoarcus olearius
85 2259929 2260111 + NZ_CP019343.1 Oceanicoccus sagamiensis
86 2909317 2909505 - NC_017857.3 Methylophaga nitratireducenticrescens
87 1579937 1580122 + NZ_CP039731.1 Aquitalea aquatilis
88 3954974 3955159 - NZ_CP047241.1 Aquitalea denitrificans
89 1923328 1923513 - NZ_LR134516.1 Neisseria animaloris
90 571475 571636 + NZ_AP022853.1 Sulfurimicrobium lacus
91 5315952 5316128 - NZ_CP068034.2 Pseudomonas syringae
92 517498 517674 + NZ_CP067022.1 Pseudomonas cannabina pv. alisalensis
93 5394138 5394314 - NZ_CP042804.1 Pseudomonas amygdali pv. tabaci str. ATCC 11528
94 700111 700287 + NC_004578.1 Pseudomonas syringae pv. tomato str. DC3000
95 262237 262392 + NZ_CP060084.1 Teredinibacter haidensis
96 139335 139520 - NZ_CP009654.1 Francisella frigiditurris
97 2622622 2622813 - NZ_CP017415.1 Acidihalobacter yilgarnenesis
98 2903814 2903975 - NZ_CP028339.1 Thauera aromatica K172
99 1900262 1900423 + NZ_CP018839.1 Thauera chlorobenzoica
100 914918 915103 - NZ_CP022278.1 Neisseria chenwenguii
101 5175959 5176135 - NZ_CP024159.1 Pseudomonas mosselii
102 2454252 2454413 - NZ_CP014646.1 Thauera humireducens
103 2671283 2671474 - NC_013851.1 Allochromatium vinosum DSM 180
104 6413594 6413770 - NZ_CP048833.1 Pseudomonas multiresinivorans
105 643235 643417 + NZ_CP025682.1 Azoarcus pumilus
106 5060602 5060778 + NZ_CP012676.1 Pseudomonas versuta
107 1245905 1246081 + NZ_CP049044.1 Pseudomonas psychrophila
108 695839 696015 + NZ_CP046621.1 Pseudomonas alkylphenolica
109 5190810 5190986 - NZ_CP071706.1 Pseudomonas donghuensis
110 5311064 5311240 - NZ_CP007039.1 Pseudomonas cichorii JBC1
111 457000 457182 + NC_008260.1 Alcanivorax borkumensis SK2
112 828074 828250 + NZ_CP014158.1 Pseudomonas citronellolis
113 1922227 1922409 + NZ_CP012362.1 Oblitimonas alkaliphila
114 515011 515190 + NZ_LR134167.1 Avibacterium volantium
115 1582213 1582404 - NZ_CP039268.1 Thermochromatium tepidum ATCC 43061
116 616592 616768 + NZ_CP022562.1 Pseudomonas monteilii
117 775454 775633 + NZ_LR215729.2 Pseudomonas marincola
118 524624 524800 + NC_008027.1 Pseudomonas entomophila L48
119 5663097 5663273 + NZ_CP009365.1 Pseudomonas soli
120 4580286 4580492 + NC_018012.1 Thiocystis violascens DSM 198
121 3257779 3257937 - NZ_CP053073.1 Usitatibacter palustris
122 114912 115097 + NZ_CP038018.1 Eikenella exigua
123 1259853 1260035 + NZ_CP064781.1 Azospira restricta
124 4178788 4178964 + NZ_CP009533.1 Pseudomonas rhizosphaerae
125 5315494 5315670 - NZ_CP054205.1 Pseudomonas rhodesiae
126 807987 808163 + NZ_CP070503.1 Pseudomonas atacamensis
127 5246352 5246528 - NZ_CP027723.1 Pseudomonas orientalis
128 5436941 5437117 - NZ_CP023272.1 Pseudomonas lurida
129 2866072 2866248 - NZ_CP014262.1 Pseudomonas corrugata
130 5474882 5475058 - NZ_CP010896.1 Pseudomonas simiae
131 5636904 5637080 - NZ_CP029608.1 Pseudomonas kribbensis
132 5761436 5761612 - NZ_CP056030.1 Pseudomonas eucalypticola
133 6002003 6002179 - NZ_CP014205.2 Pseudomonas glycinae
134 5849375 5849551 - NZ_CP027756.1 Pseudomonas synxantha
135 5843553 5843729 - NZ_CP062253.1 Pseudomonas gozinkensis
136 5853052 5853228 - NZ_CP062252.1 Pseudomonas allokribbensis
137 6204555 6204731 - NZ_CP051487.1 Pseudomonas umsongensis
138 6115027 6115203 - NZ_CP061079.1 Pseudomonas chlororaphis
139 6180767 6180943 - NZ_CP018420.1 Pseudomonas veronii
140 6147100 6147276 - NZ_LS999205.1 Pseudomonas protegens CHA0
141 2320879 2321064 - NZ_CP031700.1 Neisseria zalophi
142 2903980 2904156 - NZ_CP031146.1 Pseudomonas plecoglossicida
143 631067 631222 + NZ_CP062158.2 Pseudomonas lundensis
144 6007931 6008107 - NZ_CP035088.1 Pseudomonas viciae
145 4904846 4905022 + NZ_CP048810.1 Pseudomonas bijieensis
146 6055538 6055714 - NZ_CP034725.1 Pseudomonas brassicacearum
147 4623493 4623669 + NZ_CP005960.1 Pseudomonas mandelii JR-1
148 6133459 6133635 - NZ_CP014870.1 Pseudomonas silesiensis
149 443829 444005 + NZ_CP012400.2 Pseudomonas yamanorum
150 602813 602998 + NZ_CP014864.1 Microbulbifer thermotolerans
151 701314 701490 + NZ_CP047698.1 Pseudomonas knackmussii
152 1046438 1046599 + NZ_CP060009.1 Pseudomonas sediminis
153 584674 584850 + NC_021505.1 Pseudomonas putida NBRC 14164
154 384569 384724 + NC_014207.1 Methylotenera versatilis 301
155 633332 633493 + NZ_CP043311.1 Pseudomonas lalkuanensis
156 6336798 6336989 - NC_007645.1 Hahella chejuensis KCTC 2396
157 719591 719767 + NZ_AP022642.1 Pseudomonas otitidis
158 630816 630992 + NZ_AP014862.1 Pseudomonas furukawaii
159 1253281 1253466 + NC_007912.1 Saccharophagus degradans 2-40
160 4758891 4759067 - NC_002516.2 Pseudomonas aeruginosa PAO1
161 3952693 3952869 - NZ_CP011835.1 Azotobacter chroococcum
162 3423711 3423887 + NZ_CP045302.1 Azotobacter salinestris
163 4409588 4409773 - NZ_CP060092.1 Teredinibacter purpureus
164 200668 200847 - NZ_CP009610.1 Haemophilus influenzae
165 297360 297539 - NZ_LS483458.1 Haemophilus haemolyticus
166 210964 211143 - NZ_LS483429.1 Haemophilus aegyptius
167 3438586 3438771 - NZ_CP047491.1 Microbulbifer hydrolyticus
168 3509838 3510023 - NZ_CP019650.1 Microbulbifer agarilyticus
169 746276 746437 + NZ_CP013124.1 Pseudomonas mendocina S5.2
170 2686282 2686467 + NZ_CP060414.1 Neisseria musculi
171 509268 509444 + NZ_CP014544.1 Zhongshania aliphaticivorans
172 1465187 1465348 - NZ_CP070505.1 Pseudomonas toyotomiensis
173 623938 624123 + NZ_CP004387.1 Alcanivorax pacificus W11-5
174 615397 615573 + NC_012560.1 Azotobacter vinelandii DJ
175 1581165 1581350 + NZ_CP014143.1 Microbulbifer aggregans
176 1032518 1032703 - NZ_CP008796.1 Thermodesulfobacterium commune DSM 2178
177 2975891 2976076 - NZ_AP017928.1 Methylocaldum marinum
178 2331880 2332044 - NZ_AP014879.1 Sulfuricaulis limicola
179 4873893 4874063 - NZ_CP015839.1 Marinobacterium aestuarii
180 2080206 2080388 - NZ_CP059560.1 Aromatoleum petrolei
181 431285 431473 + NZ_CP034015.1 Shewanella livingstonensis
182 179085 179273 + NC_008345.1 Shewanella frigidimarina NCIMB 400
183 218955 219140 + NC_009901.1 Shewanella pealeana ATCC 700345
184 4194218 4194400 - NC_018691.1 Alcanivorax dieselolei B5
185 383938 384135 + NC_012968.1 Methylotenera mobilis JLW8
186 430326 430511 + NZ_CP022132.1 Francisella halioticida
187 237725 237910 + NZ_CP022375.1 Francisella opportunistica
188 239890 240075 + NC_017449.1 Francisella hispaniensis
189 276469 276654 + NC_023029.1 Francisella orientalis LADL--07-285A
190 316671 316847 + NZ_CP039700.1 Vibrio cyclitrophicus
191 207849 208031 + NZ_CP010820.1 Lysinibacillus fusiformis
192 4569764 4569925 - NZ_CP068551.1 Pseudomonas khazarica
193 2971543 2971719 - NC_011753.2 Vibrio atlanticus
194 1791378 1791554 + NZ_CP065150.1 Vibrio kanaloae
195 3126400 3126576 - NC_005966.1 Acinetobacter baylyi ADP1
196 1548205 1548390 - NZ_CP038241.1 Allofrancisella inopinata
197 5016367 5016552 - NC_010334.1 Shewanella halifaxensis HAW-EB4
198 2456430 2456612 + NZ_CP059467.1 Aromatoleum bremense
199 4746255 4746440 - NC_014012.1 Shewanella violacea DSS12
200 3507240 3507410 - NZ_CP036422.1 Halioglobus maricola
201 380530 380715 + NZ_CP059571.1 Neisseria bacilliformis
202 150190 150360 + NZ_CP016537.2 Planococcus halocryophilus
203 1551987 1552157 - NC_014147.1 Moraxella catarrhalis BBH18
204 2099843 2100028 + NC_011566.1 Shewanella piezotolerans WP3
205 5276141 5276305 - NC_009831.1 Shewanella sediminis HAW-EB3
206 475859 476035 + NZ_CP016895.1 Acinetobacter larvae
207 552491 552667 + NZ_CP029397.2 Acinetobacter defluvii
208 176439 176621 + NZ_CP022272.1 Shewanella marisflavi
209 187746 187928 + NC_009092.1 Shewanella loihica PV-4
210 2009255 2009410 - NC_018868.3 Simiduia agarivorans SA1 = DSM 21679
211 4430792 4430974 - NZ_CP041036.1 Shewanella polaris
212 351366 351542 + NZ_CP047475.1 Vibrio astriarenae
213 458408 458584 + NZ_CP024632.1 Acinetobacter junii
214 411883 412059 + NZ_CP030880.1 Acinetobacter haemolyticus
215 2480465 2480641 + NZ_CP040105.1 Acinetobacter nosocomialis M2
216 2723146 2723322 - NC_016603.1 Acinetobacter pittii PHEA-2
217 450926 451102 + NZ_CP053391.1 Acinetobacter lactucae
218 445909 446085 + NZ_CP015121.1 Acinetobacter baumannii
219 480127 480303 + NZ_CP065820.1 Acinetobacter seifertii
220 462311 462487 + NC_014259.1 Acinetobacter oleivorans DR1
221 4145144 4145320 - NZ_AP014630.1 Acinetobacter guillouiae
222 411596 411781 + NZ_CP014782.1 Shewanella psychrophila
223 2622831 2623010 + NZ_CP036200.1 Shewanella maritima
224 153863 154033 - NZ_LR134343.1 Moraxella cuniculi
225 5795806 5795991 - NZ_CP013480.3 Pandoraea norimbergensis
226 1476991 1477176 - NZ_CP038017.1 Allofrancisella frigidaquae
227 343539 343721 + NC_012778.1 [Eubacterium] eligens ATCC 27750
228 1925156 1925320 - NZ_CP045871.1 Litoricola lipolytica
229 245619 245804 + NC_015696.1 Francisella salina
230 1548203 1548388 - NZ_CP043552.1 Francisella marina
231 147183 147365 + NZ_CP016539.2 Planococcus plakortidis
232 155878 156063 + NZ_CP021781.1 Francisella adeliensis
233 2216993 2217178 + NZ_CP058952.1 Chitinibacter fontanus
234 253492 253647 - NZ_CP031124.1 Ephemeroptericola cinctiostellae
235 170324 170494 + NZ_CP016543.2 Planococcus donghaensis
236 2269448 2269630 + NC_006513.1 Aromatoleum aromaticum EbN1
237 2397799 2397975 + NZ_CP070518.1 Acinetobacter calcoaceticus
238 3539042 3539218 + NZ_CP041970.1 Acinetobacter dispersus
239 4334477 4334653 - NC_008709.1 Psychromonas ingrahamii 37
240 259283 259459 + NZ_CP009354.1 Vibrio tubiashii ATCC 19109
241 509775 509954 + NZ_CP011367.1 Thioalkalivibrio versutus
242 3335970 3336152 + NZ_CP013659.2 Planococcus rifietoensis
243 453638 453817 - NZ_CP022355.1 Paraphotobacterium marinum
244 617796 617984 + NC_014394.1 Gallionella capsiferriformans ES-2
245 147811 147993 + NZ_CP016538.2 Planococcus maritimus
246 147652 147834 + NZ_CP059540.1 Planococcus maritimus
247 2559355 2559537 - NZ_CP010554.1 Rugosibacter aromaticivorans
248 2595213 2595374 - NZ_CP044117.1 Roseomonas mucosa
249 340783 340938 + NZ_LN879430.1 Herbinix luporum
250 2544849 2545019 - NC_002977.6 Methylococcus capsulatus str. Bath
251 3300580 3300762 - NZ_CP043869.1 Neptunomonas concharum
252 2327527 2327688 + NZ_CP041660.1 Catenovulum sediminis
253 4738229 4738411 - NZ_CP020472.1 Shewanella japonica
254 259527 259712 + NZ_CP016796.1 Francisella uliginis
255 5647790 5647972 - NC_010506.1 Shewanella woodyi ATCC 51908
256 2461760 2461915 + NZ_CP014671.1 Immundisolibacter cernigliae
257 619094 619273 + NC_003910.7 Colwellia psychrerythraea 34H
258 982017 982187 - NZ_CP014234.1 Moraxella osloensis
259 2847573 2847749 - NZ_CP045350.1 Vibrio aquimaris
260 146889 147071 + NZ_CP012024.1 Bacillus smithii
261 3080005 3080166 - NZ_LN614827.1 Legionella fallonii LLAP-10
262 3172246 3172428 - NC_010622.1 Paraburkholderia phymatum STM815
263 499940 500095 - NZ_CP036170.1 [Clostridium] scindens ATCC 35704
264 154850 155020 + NZ_CP016534.2 Planococcus antarcticus DSM 14505
265 1748359 1748541 - NZ_CP041305.1 Cytobacillus ciccensis
266 3877553 3877723 - NZ_CP053069.1 Usitatibacter rugosus
267 1392481 1392636 + NZ_CP021106.3 Nitrosospira lacus
268 507569 507754 + NZ_CP019236.1 Rhodoferax koreense
269 2393612 2393794 + NZ_CP015958.1 Paraburkholderia caribensis
270 2649951 2650106 - NC_019902.2 Thioalkalivibrio nitratireducens DSM 14787
271 497715 497894 + NZ_CP017689.1 Thalassotalea crassostreae
272 3423884 3424066 + NZ_CP041783.1 Shewanella donghaensis
273 3288889 3289071 - NZ_CP026111.1 Paraburkholderia terrae
274 2985187 2985369 - NZ_CP009795.1 Burkholderia dolosa AU0158
275 427185 427367 + NZ_CP009832.1 Burkholderia multivorans ATCC BAA-247
276 1005855 1006037 + NZ_CP009727.1 Burkholderia mallei
277 340012 340194 + NZ_CP013398.1 Burkholderia seminalis
278 325150 325332 + NZ_CP013401.1 Burkholderia metallica
279 1626976 1627158 + NZ_CP011503.1 Burkholderia pyrrocinia
280 337503 337685 + NZ_CP013450.1 Burkholderia cenocepacia
281 333528 333710 + NZ_CP045235.1 Burkholderia cepacia
282 330878 331060 + NC_007510.1 Burkholderia lata
283 419905 420087 + NZ_CP013459.1 Burkholderia stagnalis
284 354134 354316 + NZ_CP020737.1 Paraburkholderia acidophila
285 3492811 3492993 - NC_007651.1 Burkholderia thailandensis E264
286 431928 432110 + NZ_CP013414.1 Burkholderia ubonensis
287 2032287 2032469 + NZ_CP008781.1 Burkholderia pseudomallei
288 4009744 4009926 - NZ_CP037951.1 Parashewanella tropica
289 996273 996452 - NZ_CP072425.1 Pseudoalteromonas viridis
290 430378 430542 + NZ_AP018721.1 Sulfuritortus calidifontis
291 3684021 3684203 - NZ_CP024934.1 Paraburkholderia graminis
292 179141 179320 + NZ_CP038015.1 Paenisporosarcina antarctica
293 138162 138332 + NZ_CP016540.2 Planococcus versutus
294 509618 509773 + NZ_CP030280.1 Blautia argi
295 438617 438778 + NZ_AP018558.1 Hydrogenophilus thermoluteolus
296 377273 377452 + NZ_LS483470.1 Leminorella richardii
297 1938123 1938305 - NZ_CP022983.1 Cytobacillus kochii
298 2881730 2881912 - NZ_CP046909.1 Paraburkholderia acidiphila
299 2908666 2908848 - NZ_CP046913.1 Paraburkholderia acidisoli
300 2506781 2506963 + NZ_CP035900.1 Burkholderia glumae
301 2008773 2008955 + NZ_CP009555.1 Burkholderia oklahomensis C6786
302 1754743 1754919 - NZ_LR134484.1 Gemella haemolysans
303 1612371 1612541 - NZ_CP013661.2 Planococcus kocurii
304 2025758 2025940 + NZ_CP040882.1 Sutterella faecalis
305 150336 150506 + NZ_CP019401.1 Planococcus faecalis
306 332734 332916 + NZ_AP018786.1 Sutterella megalosphaeroides
307 3150941 3151123 + NZ_CP017561.1 Paraburkholderia sprentiae WSM5005
308 309664 309846 + NZ_CP002580.1 Burkholderia plantarii
309 274224 274385 + NZ_CP071325.1 Photobacterium ganghwense
310 372099 372278 + NC_011312.1 Aliivibrio salmonicida LFI1238
311 330969 331148 + NZ_CP054482.1 Macrococcus bohemicus
312 614769 614948 + NZ_CP005974.1 Photobacterium gaetbulicola Gung47
313 204841 205023 + NC_007954.1 Shewanella denitrificans OS217
314 904289 904477 + NC_007614.1 Nitrosospira multiformis ATCC 25196
315 4673706 4673888 - NZ_CP046378.1 Shewanella algae
316 690264 690446 + NZ_AP012547.1 Sulfuritalea hydrogenivorans sk43H
317 1805743 1805925 - NZ_CP031467.1 Paraburkholderia caffeinilytica
318 1570008 1570175 - NZ_CP012943.1 Ralstonia solanacearum
319 3371899 3372066 - NZ_CP016022.1 Ralstonia insidiosa
320 4505550 4505732 - NC_007951.1 Paraburkholderia xenovorans LB400
321 2065163 2065345 - NC_007503.1 Carboxydothermus hydrogenoformans Z-2901
322 113452 113631 + NZ_CP011039.1 Pseudoalteromonas spongiae UST010723-006
323 832025 832204 + NZ_CP009888.1 Pseudoalteromonas piratica
324 245872 246054 + NZ_CP022358.1 Shewanella bicestrii
325 408612 408788 + NZ_CP046268.1 Vibrio spartinae
326 383814 383999 - NZ_AP022345.1 Fluviibacter phosphoraccumulans
327 145723 145905 + NZ_CP042593.1 Bacillus dafuensis
328 2541756 2541932 - NZ_CP033078.1 Vibrio zhugei
329 2454069 2454230 + NZ_CP072133.1 Pseudoalteromonas xiamenensis
330 338933 339115 + NZ_CP014616.1 Sporosarcina psychrophila
331 413013 413189 + NZ_CP044069.1 Vibrio vulnificus
332 5010991 5011158 - NC_023018.2 Pandoraea pnomenusa
333 5245989 5246156 - NZ_CP010897.2 Pandoraea vervacti
334 5485111 5485278 - NZ_CP010310.2 Pandoraea pulmonicola
335 2983075 2983257 + NZ_CP038012.1 Sporosarcina pasteurii
336 3250802 3250963 - NZ_LR778301.1 Denitratisoma oestradiolicum
337 256615 256797 + NC_016901.1 Shewanella baltica OS678
338 1441967 1442143 - NC_017095.1 Fervidobacterium pennivorans DSM 9078
339 2864335 2864514 - NZ_LS483250.1 Moritella yayanosii
340 1183308 1183490 - NZ_CP012505.1 Francisella persica ATCC VR-331
341 3742185 3742346 - NZ_CP039287.1 Cupriavidus necator H16
342 1197969 1198148 + NZ_CP023536.1 Providencia alcalifaciens
343 312932 313111 + NZ_LR134531.1 Pragia fontium
344 4139631 4139810 - NZ_CP034752.1 Jinshanibacter zhutongyuii
345 3024299 3024487 - NZ_CP043420.1 Kushneria phosphatilytica
346 968073 968255 + NC_014722.1 Mycetohabitans rhizoxinica HKI 454
347 3928124 3928306 - NZ_CP065435.1 Halomonas sp. SS10-MC5
348 4127024 4127206 - NZ_CP031223.1 Psychrobacillus glaciei
349 4848979 4849146 - NZ_CP011807.3 Pandoraea faecigallinarum
350 364747 364914 + NZ_CP013481.2 Pandoraea apista
351 1157322 1157489 + NZ_CP047385.1 Pandoraea fibrosis
352 5213427 5213594 - NZ_CP011253.3 Pandoraea oxalativorans
353 5367430 5367597 - NZ_LT906435.1 Pandoraea sputorum
354 1443550 1443717 - NZ_CP011257.1 Ralstonia mannitolilytica
355 2121905 2122087 + NZ_CP015108.1 Sporosarcina ureae
356 1051780 1051965 - NZ_AP018795.1 Acidithiobacillus ferridurans
357 300802 300987 + NC_011761.1 Acidithiobacillus ferrooxidans ATCC 23270
358 155208 155390 + NZ_CP023704.1 Caldibacillus thermoamylovorans
359 3568047 3568223 + NZ_CP031961.1 Pseudoalteromonas tunicata
360 2795042 2795224 - NZ_CP029640.1 Paraburkholderia dokdonella
361 334819 334983 + NZ_AP018933.1 Zymobacter palmae
362 186526 186702 - NZ_CP046314.1 Gemella morbillorum
363 946186 946350 + NC_023035.1 Salinispira pacifica
364 2529554 2529733 + NZ_CP011078.1 Yersinia ruckeri
365 4933100 4933279 - NZ_LR134494.1 Serratia quinivorans
366 219199 219381 + NZ_CP048602.1 Halomonas piezotolerans
367 2690845 2691027 - NZ_CP068053.1 Peribacillus psychrosaccharolyticus
368 698126 698308 - NZ_CP059082.1 Halomonas titanicae
369 2586326 2586505 - NZ_CP009787.1 Yersinia rohdei
370 3011464 3011643 + NZ_CP009781.1 Yersinia aldovae 670-83
371 1572057 1572236 + NZ_CP054043.1 Yersinia mollaretii ATCC 43969
372 315790 315969 + NZ_LR134373.1 Yersinia pseudotuberculosis
373 4360559 4360738 - NZ_CP043727.1 Yersinia canariae
374 340408 340587 + NZ_CP011118.1 Yersinia enterocolitica
375 4374649 4374828 - NZ_CP032487.1 Yersinia hibernica
376 1260267 1260446 - NZ_CP007230.1 Yersinia similis
377 144837 145016 + NZ_CP046293.1 Yersinia intermedia
378 2999790 2999972 + NZ_CP066075.1 Paraburkholderia ginsengisoli
379 2952133 2952315 - NZ_CP049134.1 Paraburkholderia tropica
380 3326767 3326946 - NZ_CP029185.2 Limnobaculum parvum
381 213630 213812 + NZ_AP022843.1 Halomonas hydrothermalis
382 213091 213273 + NZ_CP065135.1 Halomonas venusta
383 646765 646959 + NC_022357.1 Sulfuricella denitrificans skB26
384 1201857 1202027 + NZ_CP017703.1 Aeribacillus pallidus
385 354672 354860 - NZ_CP032485.1 Neokomagataea tanensis
386 1386987 1387142 - NZ_CP034464.1 Undibacterium parvum
387 3084859 3085038 - NZ_CP007029.1 Thioalkalivibrio paradoxus ARh 1
388 136369 136551 + NZ_CP014226.1 Halomonas chromatireducens
389 5005153 5005332 - NC_015567.1 Serratia plymuthica AS9
390 937109 937297 - NC_011959.1 Thermomicrobium roseum DSM 5159
391 128127 128315 + NZ_CP012152.1 Anoxybacillus gonensis
392 933948 934109 + NZ_LR134378.1 Lautropia mirabilis
393 3599820 3599999 - NZ_CP013187.1 Pseudoalteromonas phenolica
394 133381 133566 + NC_010556.1 Exiguobacterium sibiricum 255-15
395 673400 673585 + NC_014011.1 Aminobacterium colombiense DSM 12261
396 183875 184036 + NZ_CP054624.1 Cupriavidus gilardii
397 149576 149758 + NC_022524.1 Bacillus infantis NRRL B-14911
398 1484151 1484312 - NZ_CP014334.1 Fervidobacterium islandicum
399 392034 392219 + NZ_CP045571.1 Acidithiobacillus thiooxidans ATCC 19377
400 391386 391547 + NZ_CP028106.1 Fusobacterium gonidiaformans ATCC 25563
401 232693 232878 - NZ_CP028107.1 Fusobacterium necrophorum subsp. funduliforme
402 55719 55904 + NZ_CP040676.1 Exiguobacterium mexicanum
403 52682 52870 - NZ_CP015438.1 Anoxybacillus amylolyticus
404 1933561 1933716 - NZ_CP068564.1 Keratinibaculum paraultunense
405 3701789 3701971 - NZ_CP024941.1 Paraburkholderia terricola
406 333827 333982 + NZ_CP013235.1 Collimonas arenae
407 341987 342163 - NZ_CP070511.1 Parageobacillus toebii
408 1498637 1498819 + NZ_CP022989.1 Paraburkholderia aromaticivorans
409 4066167 4066349 - NC_010681.1 Paraburkholderia phytofirmans PsJN
410 2069985 2070164 - NZ_CP012395.1 Clostridium autoethanogenum DSM 10061
411 4437215 4437394 - NC_014328.1 Clostridium ljungdahlii DSM 13528
412 3272629 3272817 + NZ_CP064060.1 Anoxybacillus caldiproteolyticus
413 1548068 1548229 + NC_015681.1 Thermodesulfatator indicus DSM 15286
414 3928822 3929001 - NZ_CP013019.1 Clostridium pasteurianum
415 979876 980058 - NZ_CP048812.1 Halomonas socia
416 5281008 5281187 - NZ_CP020953.1 Clostridium drakei
417 4643014 4643193 + NZ_CP009933.1 Clostridium scatologenes
418 4430638 4430817 - NZ_CP011803.1 Clostridium carboxidivorans P7
419 2873024 2873182 - NZ_CP014170.1 Clostridium tyrobutyricum
420 2788908 2789063 + NZ_LT671418.1 Herminiimonas arsenitoxidans
421 459660 459848 - NZ_CP068419.1 Gluconobacter sphaericus
422 244177 244341 + NC_008593.1 Clostridium novyi NT
423 757842 758027 - NZ_CP021323.1 Kushneria konosiri
424 448865 449050 + NZ_CP039247.1 Corynebacterium endometrii
425 2541472 2541657 + NZ_CP021358.1 Kushneria marisflavi
426 3839609 3839794 - NZ_CP054301.1 Marinomonas primoryensis
427 129946 130134 + NZ_CP015378.1 Fictibacillus phosphorivorans
428 145137 145325 + NC_013791.2 Alkalihalobacillus pseudofirmus OF4
429 931782 931937 - NZ_CP012371.1 Nitrosospira briensis C-128
430 274908 275066 + NZ_CP032416.1 Clostridium fermenticellae
431 1950861 1951049 - NZ_CP014689.1 Gluconobacter albidus
432 411254 411442 - NZ_CP004373.1 Gluconobacter oxydans DSM 3504
433 1874239 1874424 + NZ_CP042829.1 Tepidiforma bonchosmolovskayae
434 253657 253836 + NZ_CP027286.1 Clostridium chauvoei
435 2018314 2018493 + NZ_CP023671.1 Clostridium septicum
436 202222 202401 + NC_020291.1 Clostridium saccharoperbutylacetonicum N1-4(HMT)
437 6150639 6150815 - NZ_CP009428.1 Paenibacillus odorifer
438 2966411 2966584 - NC_008261.1 Clostridium perfringens ATCC 13124
439 396853 397038 + NZ_CP007790.1 Corynebacterium marinum DSM 44953
440 1215389 1215574 - NC_009718.1 Fervidobacterium nodosum Rt17-B1
441 2258615 2258794 - NZ_LT906477.1 Clostridium cochlearium
442 3529796 3529975 - NZ_CP030775.1 Clostridium butyricum
443 1635173 1635361 + NZ_CP063356.1 Anaerobacillus isosaccharinicus
444 7056706 7056891 + NZ_CP035758.1 Ktedonosporobacter rubrisoli
445 1122276 1122452 - NZ_CP048429.1 Paenibacillus jilunlii
446 6428947 6429123 - NZ_CP009287.1 Paenibacillus graminis
447 1144602 1144778 - NZ_CP068595.1 Paenibacillus sonchi
448 7129869 7130045 - NZ_LN831776.1 Paenibacillus riograndensis SBR5
449 7393804 7393980 - NZ_CP009285.1 Paenibacillus borealis
450 199265 199444 + NZ_CP043998.1 Clostridium diolis
451 4438479 4438658 + NZ_CP019038.1 Massilia putida
452 1466461 1466616 - NC_016630.1 Filifactor alocis ATCC 35896
453 227328 227507 + NC_022571.1 Clostridium saccharobutylicum DSM 13864
454 3262890 3263063 - NC_015687.1 Clostridium acetobutylicum DSM 1731
455 1155444 1155602 + NZ_CP011801.1 Nitrospira moscoviensis
456 801950 802126 - NZ_LT635475.1 Ezakiella massiliensis
457 287274 287453 + NZ_CP014204.2 Clostridium baratii
458 1508290 1508472 - NC_013385.1 Ammonifex degensii KC4
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NC_002971.4
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF00253.23 0.95 435 1885.0 same-strand Ribosomal protein S14p/S29e
2 PF00410.21 1.0 455 1450.5 same-strand Ribosomal protein S8
3 PF00347.25 1.0 456 903 same-strand Ribosomal protein L6
4 PF00861.24 0.96 440 531 same-strand Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
5 PF03719.17 1.0 457 7.0 same-strand Ribosomal protein S5, C-terminal domain
6 PF00333.22 1.0 457 7.0 same-strand Ribosomal protein S5, N-terminal domain
7 PF00828.21 0.97 444 4 same-strand Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
8 PF00344.22 1.0 457 455.0 same-strand SecY
9 PF00416.24 0.73 333 2076 same-strand Ribosomal protein S13/S18
10 PF00411.21 0.61 279 2433 same-strand Ribosomal protein S11
++ More..