ProsmORF-pred
Result : Q7VRK1
Protein Information
Information Type Description
Protein name 50S ribosomal protein L28
NCBI Accession ID BX248583.1
Organism Blochmannia floridanus
Left 679697
Right 679936
Strand -
Nucleotide Sequence ATGTCTCGCACATGCCAAATTACAAGAAAAAAACCAATGAATGGAAATAAAAGATCACATGCTATGAATGCAACAAAACGATGGTTTATACCAAATATACATTCTCATCGATTTTGGATAGAAAATAAAAAAAAATTTATTAAATTACGTATTTCTACAAAAGGTATACGATTAGTTGATAAATTAGGTATTGAACAATTTTTATCAATCGTATCTTTCAAAAATAAAAAAAATTATTAG
Sequence MSRTCQITRKKPMNGNKRSHAMNATKRWFIPNIHSHRFWIENKKKFIKLRISTKGIRLVDKLGIEQFLSIVSFKNKKNY
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl00367. Profile Description: Ribosomal L28 family. This model describes bacterial and chloroplast forms of the 50S ribosomal protein L28, a polypeptide about 60 amino acids in length. Mitochondrial homologs differ substantially in architecture (e.g. SP|P36525 from Saccharomyces cerevisiae, which is 258 amino acids long) and are not included. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Pubmed ID 12886019
Domain CDD:412338
Functional Category Ribosomal_protein
Uniprot ID Q7VRK1
ORF Length (Amino Acid) 79
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 575
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 4515712 4515948 - NZ_LR134373.1 Yersinia pseudotuberculosis
2 1690826 1691062 + NZ_CP007230.1 Yersinia similis
3 4612266 4612502 - NZ_CP006569.1 Sodalis praecaptivus
4 71085 71321 + NZ_CP043727.1 Yersinia canariae
5 4623377 4623613 - NZ_CP011118.1 Yersinia enterocolitica
6 73793 74029 + NZ_CP032487.1 Yersinia hibernica
7 4620360 4620596 - NZ_CP046293.1 Yersinia intermedia
8 4170112 4170348 - NZ_CP042220.2 Dickeya poaceiphila
9 221127 221363 + NZ_LT615367.1 Dickeya aquatica
10 179485 179721 + NC_012880.1 Musicola paradisiaca Ech703
11 184085 184321 + NZ_CP025799.1 Dickeya zeae
12 4478960 4479196 - NC_012912.1 Dickeya chrysanthemi Ech1591
13 172820 173056 + NZ_CP031560.1 Dickeya dianthicola
14 4668936 4669172 - NC_014500.1 Dickeya dadantii 3937
15 2601108 2601344 - NZ_CP009460.1 Dickeya fangzhongdai
16 70419 70655 + NZ_LN907827.1 Erwinia gerundensis
17 3541933 3542169 - NZ_CP029185.2 Limnobaculum parvum
18 4349148 4349384 - NZ_CP034752.1 Jinshanibacter zhutongyuii
19 57127 57363 + NZ_CP050150.1 Hafnia alvei
20 2181053 2181289 - NZ_CP011078.1 Yersinia ruckeri
21 2958624 2958860 + NZ_CP009787.1 Yersinia rohdei
22 2338943 2339179 + NZ_CP015137.1 Dickeya solani IPO 2222
23 4047409 4047645 - NC_017910.1 Shimwellia blattae DSM 4481 = NBRC 105725
24 2610973 2611209 - NZ_CP009781.1 Yersinia aldovae 670-83
25 1134062 1134298 - NZ_CP054043.1 Yersinia mollaretii ATCC 43969
26 103619 103855 + NC_013961.1 Erwinia amylovora CFBP1430
27 86200 86436 + NC_010694.1 Erwinia tasmaniensis Et1/99
28 3899553 3899789 - NZ_CP023567.1 Erwinia pyrifoliae
29 3549844 3550080 - NZ_CP067057.1 Rahnella aceris
30 1393508 1393744 - NZ_CP065640.1 Serratia rubidaea
31 31780 32016 + NZ_CP071320.1 Serratia ureilytica
32 4369773 4370009 - NZ_CP016948.1 Serratia surfactantfaciens
33 5110953 5111189 - NZ_LT906479.1 Serratia ficaria
34 5161358 5161594 - NZ_CP038662.1 Serratia nematodiphila
35 5202543 5202779 - NZ_CP048784.1 Serratia liquefaciens
36 1031547 1031783 + NZ_CP007044.2 Chania multitudinisentens RB-25
37 1653174 1653410 - NZ_CP011254.1 Serratia fonticola
38 4226670 4226906 - NZ_CP048796.1 Providencia vermicola
39 4725326 4725562 - NZ_CP034938.1 Pectobacterium odoriferum
40 3940578 3940814 + NZ_CP017482.1 Pectobacterium polaris
41 3922238 3922474 - NC_003197.2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
42 3770378 3770614 - NZ_LR134531.1 Pragia fontium
43 4455974 4456210 - NZ_AP023184.1 Buttiauxella agrestis
44 1750760 1750996 - NZ_CP053416.1 Salmonella bongori
45 4676723 4676959 - NC_009792.1 Citrobacter koseri ATCC BAA-895
46 3518042 3518278 + NZ_CP038469.1 Citrobacter tructae
47 2520959 2521195 + NZ_CP044098.1 Citrobacter portucalensis
48 2557580 2557816 - NZ_CP033744.1 Citrobacter freundii
49 4407727 4407963 + NC_013716.1 Citrobacter rodentium ICC168
50 342590 342826 - NZ_CP045205.1 Citrobacter telavivensis
51 5257885 5258121 - NZ_LR134494.1 Serratia quinivorans
52 5342945 5343181 - NC_015567.1 Serratia plymuthica AS9
53 1072720 1072956 + NZ_CP023536.1 Providencia alcalifaciens
54 843532 843768 + NZ_CP029736.1 Providencia rettgeri
55 3731591 3731827 - NZ_CP031123.2 Providencia huaxiensis
56 5030905 5031141 - NC_012962.1 Photorhabdus asymbiotica
57 1858504 1858740 - NZ_CP011104.1 Photorhabdus thracensis
58 1595161 1595397 + NZ_CP026364.1 Proteus hauseri
59 21965 22201 + NZ_CP047349.1 Proteus terrae subsp. cibarius
60 150148 150384 + NZ_CP038853.1 Pantoea vagans
61 3470258 3470494 + NC_010554.1 Proteus mirabilis HI4320
62 153542 153778 + NZ_LS483470.1 Leminorella richardii
63 4233405 4233641 - NZ_LS483422.1 Providencia heimbachae
64 5638763 5638999 - NC_005126.1 Photorhabdus laumondii subsp. laumondii TTO1
65 2635667 2635903 + NZ_CP014136.1 Gibbsiella quercinecans
66 76634 76870 + NC_014306.1 Erwinia billingiae Eb661
67 1627614 1627850 - NZ_CP023706.1 Edwardsiella tarda
68 3696634 3696870 - NZ_CP016043.1 Edwardsiella hoshinae
69 4490170 4490406 + NZ_CP014137.1 Brenneria goodwinii
70 50014 50250 + NC_012779.2 Edwardsiella ictaluri 93-146
71 1813662 1813898 + NZ_CP006664.1 Edwardsiella anguillarum ET080813
72 111889 112125 + NZ_CP065534.1 Lonsdalea populi
73 1251825 1252061 + NZ_CP023009.1 Lonsdalea britannica
74 186175 186411 + NZ_CP034036.1 Brenneria nigrifluens DSM 30175 = ATCC 13028
75 1706930 1707166 + NZ_CP019706.1 Pantoea alhagi
76 4149315 4149551 - NZ_CP061511.1 Mixta calida
77 4455029 4455265 - NZ_CP026377.1 Mixta gaviniae
78 3656429 3656665 - NZ_CP028271.1 Mixta intestinalis
79 128967 129203 + NZ_CP034148.1 Pantoea agglomerans
80 137469 137705 + NZ_CP045720.1 Pantoea eucalypti
81 2966884 2967120 + NZ_CP049115.1 Pantoea stewartii
82 147767 148003 + NC_017554.1 Pantoea ananatis PA13
83 4553154 4553390 - NZ_CP038498.1 Pectobacterium punjabense
84 1395188 1395424 - NZ_CP047495.1 Pectobacterium brasiliense
85 4665836 4666072 - NZ_CP051652.1 Pectobacterium carotovorum
86 4769990 4770226 - NZ_CP065044.1 Pectobacterium aroidearum
87 4307707 4307943 + NZ_CP015749.1 Pectobacterium parmentieri
88 1919063 1919299 + NZ_CP015750.1 Pectobacterium wasabiae CFBP 3304
89 1625550 1625786 - NZ_CP042941.1 Atlantibacter hermannii
90 3613088 3613324 + NZ_CP023529.1 Lelliottia amnigena
91 2322339 2322575 - NZ_AP019007.1 Enterobacter oligotrophicus
92 68055 68291 + NZ_CP054058.1 Scandinavium goeteborgense
93 98418 98654 + NZ_AP022508.1 Enterobacter bugandensis
94 104225 104461 + NZ_CP035129.1 Kosakonia cowanii
95 4496617 4496853 - NZ_CP012871.1 [Enterobacter] lignolyticus
96 99444 99680 + NZ_CP027986.1 Enterobacter sichuanensis
97 109778 110014 + NZ_CP017184.1 Enterobacter roggenkampii
98 4685746 4685982 - NZ_CP013990.1 Leclercia adecarboxylata
99 114164 114400 + NC_015968.1 Enterobacter soli
100 2495099 2495335 - NZ_CP025034.2 Enterobacter sp. SGAir0187
101 126762 126998 + NZ_CP009756.1 Enterobacter cloacae
102 3334548 3334784 + NZ_CP017279.1 Enterobacter ludwigii
103 3429905 3430141 - NZ_CP045769.1 Enterobacter cancerogenus
104 3014774 3015010 - NZ_CP016337.1 Kosakonia sacchari
105 4760101 4760337 - NZ_CP063425.1 Kosakonia pseudosacchari
106 3244968 3245204 + NZ_CP045300.1 Kosakonia arachidis
107 1257934 1258170 - NZ_LT556085.1 Citrobacter amalonaticus
108 120856 121092 + NZ_CP043318.1 Enterobacter chengduensis
109 121218 121454 + NZ_LR134475.1 Klebsiella aerogenes
110 113742 113978 + NZ_CP041247.1 Raoultella electrica
111 100555 100791 + NZ_CP014007.2 Kosakonia oryzae
112 582980 583216 + NZ_CP051548.1 Phytobacter diazotrophicus
113 1593791 1594027 - NZ_CP026047.1 Raoultella planticola
114 4766442 4766678 + NZ_CP011602.1 Phytobacter ursingii
115 125660 125896 + NZ_CP054254.1 Klebsiella variicola
116 128510 128746 + NZ_CP046672.1 Raoultella ornithinolytica
117 123075 123311 + NZ_CP050508.1 Raoultella terrigena
118 180404 180640 + NZ_CP060111.1 Klebsiella michiganensis
119 167780 168016 + NZ_CP036175.1 Klebsiella huaxiensis
120 3460196 3460432 - NZ_CP034035.1 Brenneria rubrifaciens
121 170634 170870 + NZ_CP009125.1 Pectobacterium atrosepticum
122 4560319 4560555 - NZ_LR134201.1 Cedecea lapagei
123 4977977 4978213 - NZ_CP023525.1 Cedecea neteri
124 4282347 4282583 - NZ_CP015581.1 Tatumella citrea
125 4309500 4309736 - NZ_CP072455.1 Xenorhabdus budapestensis
126 3591872 3592108 - NZ_FO704551.1 Xenorhabdus poinarii G6
127 3503057 3503293 + NZ_CP027107.1 Cronobacter sakazakii
128 4029399 4029635 - NZ_CP013940.1 Cronobacter malonaticus LMG 23826
129 4190173 4190409 - NZ_CP012257.1 Cronobacter universalis NCTC 9529
130 4266603 4266839 - NZ_CP012264.1 Cronobacter condimenti 1330
131 4130247 4130483 + NZ_CP012268.1 Cronobacter muytjensii ATCC 51329
132 4361621 4361857 - NZ_CP012266.1 Cronobacter dublinensis subsp. dublinensis LMG 23823
133 166076 166312 + NZ_CP045845.1 Kluyvera intermedia
134 4188018 4188254 + NZ_CP061527.1 Shigella dysenteriae
135 62879 63115 + NZ_LR134340.1 Escherichia marmotae
136 2977375 2977611 + NZ_CP057657.1 Escherichia fergusonii
137 3781751 3781987 - NC_004337.2 Shigella flexneri 2a str. 301
138 3811438 3811674 - NC_000913.3 Escherichia coli str. K-12 substr. MG1655
139 3772672 3772908 - NZ_AP014857.1 Escherichia albertii
140 1312825 1313061 + NZ_CP040428.1 Jejubacter calystegiae
141 121137 121373 + NZ_CP065838.1 Klebsiella quasipneumoniae
142 5162481 5162717 - NC_016845.1 Klebsiella pneumoniae subsp. pneumoniae HS11286
143 4555422 4555658 - NC_002695.2 Escherichia coli O157:H7 str. Sakai
144 3256239 3256475 + NZ_CP060401.1 Xenorhabdus nematophila
145 1038303 1038539 + NZ_CP020388.1 Pluralibacter gergoviae
146 370575 370829 - NC_016893.1 Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)
147 188929 189165 + NZ_CP009056.1 Frischella perrara
148 3267368 3267604 - NZ_CP016176.1 Xenorhabdus hominickii
149 2046307 2046543 + NZ_CP016180.1 Pasteurella skyensis
150 135451 135687 + NZ_FO704550.1 Xenorhabdus doucetiae
151 4176696 4176932 - NC_013892.1 Xenorhabdus bovienii SS-2004
152 441047 441283 + NC_016901.1 Shewanella baltica OS678
153 5216183 5216419 - NZ_CP015113.1 Kosakonia radicincitans
154 403359 403595 + NZ_CP022358.1 Shewanella bicestrii
155 493436 493672 - NZ_CP028926.1 Pasteurella multocida
156 8738 8974 + NZ_LT906448.1 Pasteurella dagmatis
157 314024 314260 - NZ_CP007445.1 Gilliamella apicola
158 4654983 4655219 - NC_014012.1 Shewanella violacea DSS12
159 633437 633673 + NZ_LR134510.1 Actinobacillus delphinicola
160 3719379 3719615 - NZ_CP037951.1 Parashewanella tropica
161 505345 505581 + NC_010334.1 Shewanella halifaxensis HAW-EB4
162 5530378 5530614 - NC_010506.1 Shewanella woodyi ATCC 51908
163 2782565 2782801 - NZ_LR884459.1 Psychrobacter arenosus
164 145027 145263 + NZ_CP018804.1 Histophilus somni
165 2294702 2294938 + NC_011566.1 Shewanella piezotolerans WP3
166 3894861 3895097 - NZ_CP022272.1 Shewanella marisflavi
167 4166357 4166593 - NC_009092.1 Shewanella loihica PV-4
168 718716 718952 + NZ_LR134167.1 Avibacterium volantium
169 2010058 2010294 + NC_011852.1 Glaesserella parasuis SH0165
170 4174091 4174327 + NZ_CP043042.1 Marinobacter fonticola
171 1017673 1017909 - NC_007645.1 Hahella chejuensis KCTC 2396
172 4974870 4975106 - NZ_CP037952.1 Parashewanella spongiae
173 4597637 4597873 - NZ_CP028897.1 Dongshaea marina
174 4663707 4663943 - NC_009901.1 Shewanella pealeana ATCC 700345
175 196980 197216 - NC_012691.1 Tolumonas auensis DSM 9187
176 287907 288143 - NZ_CP015029.1 Frederiksenia canicola
177 2827819 2828055 + NZ_CP036200.1 Shewanella maritima
178 2039560 2039796 - NZ_CP016605.1 Bisgaardia hudsonensis
179 65728 65964 + NZ_CP036536.1 Salinimonas lutimaris
180 154843 155079 + NZ_CP071325.1 Photobacterium ganghwense
181 577997 578233 + NZ_CP034015.1 Shewanella livingstonensis
182 5203510 5203746 + NZ_CP021425.1 Oleiphilus messinensis
183 518099 518335 - NZ_CP022355.1 Paraphotobacterium marinum
184 451208 451444 + NC_009831.1 Shewanella sediminis HAW-EB3
185 3796572 3796808 - NZ_CP014782.1 Shewanella psychrophila
186 1861201 1861437 - NZ_CP016604.1 Otariodibacter oris
187 62264 62500 + NZ_CP014322.1 Alteromonas addita
188 4193444 4193680 - NC_015554.1 Alteromonas naphthalenivorans
189 242398 242634 + NZ_CP006944.1 Mannheimia varigena USDA-ARS-USMARC-1312
190 634237 634473 + NZ_CP061280.1 Mannheimia bovis
191 257433 257669 + NZ_CP006954.1 Bibersteinia trehalosi USDA-ARS-USMARC-188
192 313124 313360 + NC_021883.1 Mannheimia haemolytica USMARC_2286
193 120813 121049 + NZ_CP041036.1 Shewanella polaris
194 6554188 6554424 + NZ_CP020038.1 Agarilytica rhodophyticola
195 4529509 4529745 - NZ_CP046378.1 Shewanella algae
196 43951 44187 + NZ_CP009610.1 Haemophilus influenzae
197 1914285 1914521 - NZ_LS483458.1 Haemophilus haemolyticus
198 697484 697720 + NZ_LS483443.1 Aggregatibacter segnis ATCC 33393
199 1139193 1139429 - NZ_LR134327.1 Aggregatibacter aphrophilus ATCC 33389
200 1133005 1133241 + NZ_CP040863.1 Rodentibacter heylii
201 187804 188040 - NZ_CP046531.1 Mannheimia ovis
202 233213 233449 - NZ_CP055305.1 Mannheimia pernigra
203 2855663 2855899 - NZ_AP019651.1 Vibrio taketomensis
204 156345 156581 + NZ_CP045350.1 Vibrio aquimaris
205 500504 500740 + NZ_CP005974.1 Photobacterium gaetbulicola Gung47
206 3614070 3614306 + NZ_CP041783.1 Shewanella donghaensis
207 407344 407580 + NZ_CP020472.1 Shewanella japonica
208 2717383 2717619 - NZ_CP009977.1 Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
209 208955 209191 - NC_013456.1 Vibrio antiquarius
210 189051 189287 + NZ_CP030788.1 Vibrio campbellii
211 1622398 1622634 - NZ_CP019959.1 Vibrio owensii
212 405877 406113 + NZ_CP009467.1 Vibrio harveyi
213 2702264 2702500 + NZ_CP014945.1 Psychrobacter alimentarius
214 4376206 4376442 - NZ_CP031769.1 Salinimonas sediminis
215 118801 119037 + NZ_AP014635.1 Vibrio tritonius
216 330258 330494 + NZ_CP069213.1 Shewanella litorisediminis
217 395265 395501 + NC_008700.1 Shewanella amazonensis SB2B
218 4549553 4549789 + NZ_CP020373.1 Shewanella khirikhana
219 3484166 3484402 + NC_017506.1 Marinobacter adhaerens HP15
220 195196 195432 + NZ_CP040021.1 Salinivibrio kushneri
221 4565113 4565349 - NC_008345.1 Shewanella frigidimarina NCIMB 400
222 2042544 2042780 - NZ_CP021376.1 Oceanisphaera avium
223 157899 158135 + NZ_CP012621.1 Zobellella denitrificans
224 137758 137994 + NZ_CP033078.1 Vibrio zhugei
225 3962147 3962383 - NZ_CP014544.1 Zhongshania aliphaticivorans
226 3218884 3219120 - NZ_LT960611.1 Vibrio tapetis subsp. tapetis
227 365439 365675 + NC_007954.1 Shewanella denitrificans OS217
228 1936248 1936484 + NZ_CP021377.1 Oceanisphaera profunda
229 479235 479471 + NZ_CP070624.1 Photobacterium damselae subsp. damselae
230 115154 115390 + NZ_CP009354.1 Vibrio tubiashii ATCC 19109
231 1540244 1540480 + NZ_CP015031.1 Basfia succiniciproducens
232 1920442 1920678 + NC_006300.1 [Mannheimia] succiniciproducens MBEL55E
233 924938 925174 - NZ_CP014143.1 Microbulbifer aggregans
234 501155 501391 + NZ_CP015425.1 [Haemophilus] ducreyi
235 197084 197320 - NZ_LT906463.1 Haemophilus pittmaniae
236 2247015 2247251 + NZ_CP030753.1 Actinobacillus pleuropneumoniae
237 1658698 1658934 - NZ_CP007715.1 Actinobacillus equuli subsp. equuli
238 1656689 1656925 - NZ_CP009159.1 Actinobacillus suis ATCC 33415
239 2934682 2934918 - NZ_CP032093.1 Vibrio alfacsensis
240 3069808 3070044 - NZ_CP031781.1 Vibrio parahaemolyticus
241 2918376 2918612 - NZ_CP018312.1 Vibrio rotiferianus
242 2033889 2034125 - NZ_CP025792.1 Vibrio jasicida 090810c
243 29721 29957 + NZ_CP031961.1 Pseudoalteromonas tunicata
244 3812237 3812473 - NZ_CP014864.1 Microbulbifer thermotolerans
245 3707693 3707929 - NZ_CP017715.1 Marinobacter salinus
246 862846 863082 - NZ_CP029206.1 Actinobacillus porcitonsillarum
247 171489 171725 + NZ_CP046268.1 Vibrio spartinae
248 3687442 3687678 + NZ_CP011494.1 Marinobacter psychrophilus
249 45221 45457 + NZ_LS483429.1 Haemophilus aegyptius
250 2281622 2281858 - NZ_AP018689.1 Vibrio aphrogenes
251 2556362 2556598 - NZ_AP018685.1 Vibrio rumoiensis
252 2956342 2956578 - NZ_CP047475.1 Vibrio astriarenae
253 2611280 2611516 - NZ_CP014035.2 Vibrio fluvialis
254 1296963 1297199 - NZ_CP065150.1 Vibrio kanaloae
255 3028213 3028449 + NZ_AP019657.1 Vibrio ponticus
256 628701 628937 + NZ_CP040990.1 Vibrio furnissii
257 180319 180555 + NC_011753.2 Vibrio atlanticus
258 3162194 3162430 - NZ_CP039700.1 Vibrio cyclitrophicus
259 2163792 2164028 + NZ_CP052766.1 Alteromonas pelagimontana
260 20185 20421 + NZ_CP046670.1 Alteromonas mediterranea
261 2715138 2715374 - NZ_CP022741.1 Vibrio qinghaiensis
262 1694468 1694704 - NZ_CP046793.1 Vibrio metschnikovii
263 158436 158672 + NC_014541.1 Ferrimonas balearica DSM 9799
264 2032309 2032545 + NZ_CP014234.1 Moraxella osloensis
265 2112006 2112242 + NC_007204.1 Psychrobacter arcticus 273-4
266 2450711 2450947 + NC_007969.1 Psychrobacter cryohalolentis K5
267 384729 384965 - NZ_CP012418.1 Kangiella sediminilitoris
268 2429331 2429567 + NZ_CP013816.1 Piscirickettsia salmonis
269 669253 669489 - NZ_CP020931.1 Marinobacter salarius
270 930739 930975 + NZ_CP012678.1 Psychrobacter urativorans
271 231494 231730 - NC_011312.1 Aliivibrio salmonicida LFI1238
272 59706 59942 + NZ_CP008849.1 Alteromonas australica
273 3006986 3007222 - NZ_CP072844.1 Psychrosphaera aestuarii
274 2872238 2872474 - NZ_CP016414.1 Vibrio scophthalmi
275 531537 531773 + NZ_AP018933.1 Zymobacter palmae
276 58398 58634 - NZ_CP029347.1 Saliniradius amylolyticus
277 3534641 3534877 - NZ_CP011797.1 Reinekea forsetii
278 814086 814322 - NZ_CP072425.1 Pseudoalteromonas viridis
279 2818419 2818655 + NC_018868.3 Simiduia agarivorans SA1 = DSM 21679
280 1095755 1095991 - NZ_CP014056.2 Grimontia hollisae
281 3571604 3571840 + NZ_CP031093.1 Hydrocarboniclastica marina
282 383179 383415 - NZ_CP010975.1 Kangiella geojedonensis
283 281232 281468 + NZ_CP038033.1 Nitrosococcus wardiae
284 3626910 3627146 + NZ_CP051180.1 Ferrimonas lipolytica
285 2992317 2992553 + NC_008340.1 Alkalilimnicola ehrlichii MLHE-1
286 338403 338639 + NZ_CP044069.1 Vibrio vulnificus
287 4663497 4663733 + NC_007912.1 Saccharophagus degradans 2-40
288 257947 258183 + NC_006512.1 Idiomarina loihiensis L2TR
289 2735409 2735645 + NZ_CP034759.1 Litorilituus sediminis
290 3443666 3443902 - NZ_CP021435.1 Halomonas beimenensis
291 2694443 2694679 + NZ_CP035688.1 Vibrio metoecus
292 104947 105183 + NZ_AP014524.1 Vibrio cholerae MS6
293 576727 576963 - NC_013960.1 Nitrosococcus halophilus Nc 4
294 644518 644754 + NZ_CP060092.1 Teredinibacter purpureus
295 3721241 3721477 + NZ_CP060084.1 Teredinibacter haidensis
296 3167570 3167806 - NZ_CP032090.1 Pseudoalteromonas donghaensis
297 1747166 1747402 - NZ_CP020465.1 Cognaticolwellia beringensis
298 4123444 4123680 - NZ_CP019650.1 Microbulbifer agarilyticus
299 3309953 3310189 - NC_007963.1 Chromohalobacter salexigens DSM 3043
300 2649414 2649650 + NC_017857.3 Methylophaga nitratireducenticrescens
301 594238 594474 - NC_014147.1 Moraxella catarrhalis BBH18
302 290960 291196 + NZ_CP013187.1 Pseudoalteromonas phenolica
303 2420276 2420512 + NC_013166.1 Kangiella koreensis DSM 16069
304 68106 68342 + NZ_CP031415.1 Saccharospirillum mangrovi
305 2934933 2935169 - NZ_CP011041.1 Pseudoalteromonas tetraodonis
306 2917162 2917398 - NZ_CP011030.1 Pseudoalteromonas issachenkonii
307 816303 816539 - NZ_CP011381.2 Moraxella bovoculi
308 886285 886521 - NZ_CP011158.1 Moraxella ovis
309 1656071 1656307 - NZ_CP065728.1 Moraxella nonliquefaciens
310 2121413 2121649 - NZ_CP048711.1 Kineobactrum salinum
311 3153009 3153245 - NZ_CP027523.1 Pseudoalteromonas carrageenovora
312 3078427 3078663 - NZ_CP033065.1 Pseudoalteromonas agarivorans
313 3156931 3157167 - NZ_CP023464.1 Pseudoalteromonas atlantica
314 3234996 3235232 - NZ_CP011028.1 Pseudoalteromonas espejiana DSM 9414
315 3408161 3408397 + NZ_CP017689.1 Thalassotalea crassostreae
316 990795 991031 - NZ_CP071766.1 Acinetobacter towneri
317 2662318 2662554 + NZ_CP044483.1 Acinetobacter schindleri
318 2341361 2341597 + NZ_CP023559.1 Salinicola tamaricis
319 1680331 1680567 - NZ_CP072133.1 Pseudoalteromonas xiamenensis
320 2228874 2229110 + NZ_CP025120.1 Kangiella profundi
321 2593395 2593631 - NZ_CP011039.1 Pseudoalteromonas spongiae UST010723-006
322 184790 185026 - NZ_CP009888.1 Pseudoalteromonas piratica
323 4232521 4232757 - NZ_CP036422.1 Halioglobus maricola
324 1151655 1151891 - NZ_CP041660.1 Catenovulum sediminis
325 127500 127736 + NZ_CP047491.1 Microbulbifer hydrolyticus
326 494222 494458 - NC_005966.1 Acinetobacter baylyi ADP1
327 2801644 2801880 + NZ_CP024632.1 Acinetobacter junii
328 2973276 2973512 + NZ_CP030880.1 Acinetobacter haemolyticus
329 2573272 2573508 + NZ_CP041970.1 Acinetobacter dispersus
330 3180109 3180345 + NC_013861.1 Legionella longbeachae NSW150
331 2854963 2855199 + NZ_CP025491.2 Legionella sainthelensi
332 428061 428297 - NZ_CP045650.1 Acinetobacter wanghuae
333 1276437 1276673 - NZ_CP012808.1 Acinetobacter equi
334 2949295 2949531 + NZ_CP029397.2 Acinetobacter defluvii
335 2889196 2889432 + NZ_CP049916.1 Acinetobacter lanii
336 2991159 2991395 + NZ_CP035934.2 Acinetobacter cumulans
337 577997 578233 - NZ_CP049801.1 Acinetobacter shaoyimingii
338 3260075 3260311 + NZ_CP016895.1 Acinetobacter larvae
339 1551790 1552026 + NZ_CP040105.1 Acinetobacter nosocomialis M2
340 3609765 3610001 - NC_016603.1 Acinetobacter pittii PHEA-2
341 1444410 1444646 + NZ_CP070518.1 Acinetobacter calcoaceticus
342 3475046 3475282 + NZ_CP053391.1 Acinetobacter lactucae
343 3459467 3459703 + NZ_CP015121.1 Acinetobacter baumannii
344 3571388 3571624 + NZ_CP065820.1 Acinetobacter seifertii
345 3660035 3660271 + NC_014259.1 Acinetobacter oleivorans DR1
346 520572 520808 - NZ_AP014630.1 Acinetobacter guillouiae
347 465462 465698 - NZ_CP048878.1 Spartinivicinus ruber
348 2125621 2125857 + NZ_CP018139.1 Halomonas aestuarii
349 519636 519872 - NZ_CP013742.1 Legionella pneumophila
350 3665596 3665832 + NZ_CP051883.1 Aeromonas salmonicida
351 775206 775442 - NZ_CP048812.1 Halomonas socia
352 651137 651373 - NZ_CP043929.1 Methylomonas rhizoryzae
353 529757 529993 - NZ_CP032134.1 Acinetobacter chinensis
354 366972 367208 - NC_011901.1 Thioalkalivibrio sulfidiphilus HL-EbGr7
355 3358990 3359226 + NZ_CP044060.1 Aeromonas veronii
356 3607259 3607495 + NZ_CP065745.1 Aeromonas allosaccharophila
357 124686 124922 + NZ_AP022188.1 Aeromonas media
358 174398 174634 + NZ_CP050851.1 Aeromonas hydrophila
359 3373988 3374224 - NZ_CP011025.1 Pseudoalteromonas arctica A 37-1-2
360 1341887 1342123 - NZ_CP019628.1 Pseudoalteromonas aliena
361 830986 831222 - NZ_LN614830.1 Tatlockia micdadei
362 218319 218555 + NC_003910.7 Colwellia psychrerythraea 34H
363 135206 135442 + NC_022664.1 Spiribacter curvatus
364 1234189 1234425 - NZ_CP018632.1 Granulosicoccus antarcticus IMCC3135
365 81510 81746 + NZ_LR134376.1 Aeromonas encheleia
366 2793792 2794028 - NC_007481.1 Pseudoalteromonas translucida
367 3067020 3067256 - NZ_CP011036.1 Pseudoalteromonas nigrifaciens
368 5985883 5986119 - NC_002516.2 Pseudomonas aeruginosa PAO1
369 475574 475810 - NZ_CP038254.1 Legionella israelensis
370 1215276 1215512 + NC_017856.1 Methylophaga frappieri
371 77313 77549 - NC_008709.1 Psychromonas ingrahamii 37
372 311329 311565 + NZ_CP068345.1 Succinivibrio dextrinosolvens
373 2872423 2872659 - NZ_CP043420.1 Kushneria phosphatilytica
374 3779433 3779669 - NZ_CP044399.1 Moritella marina ATCC 15381
375 4057374 4057610 + NZ_CP044399.1 Moritella marina ATCC 15381
376 1712751 1712987 + NZ_CP021781.1 Francisella adeliensis
377 101132 101368 + NZ_CP009654.1 Francisella frigiditurris
378 5904249 5904485 - NZ_CP047698.1 Pseudomonas knackmussii
379 865148 865384 + NZ_CP048833.1 Pseudomonas multiresinivorans
380 6750397 6750633 - NZ_CP014158.1 Pseudomonas citronellolis
381 2930834 2931070 + NZ_LN614827.1 Legionella fallonii LLAP-10
382 532362 532598 + NZ_CP065435.1 Halomonas sp. SS10-MC5
383 552060 552296 + NZ_AP022843.1 Halomonas hydrothermalis
384 553695 553931 + NZ_CP065135.1 Halomonas venusta
385 6045911 6046147 - NZ_AP014862.1 Pseudomonas furukawaii
386 3795945 3796181 + NZ_CP040449.1 Aeromonas simiae
387 780993 781229 - NZ_LT906442.1 Legionella waltersii
388 144543 144779 + NZ_CP012154.1 Wenzhouxiangella marina
389 3318178 3318414 - NC_014532.2 Halomonas elongata DSM 2581
390 480579 480815 - NZ_LT906451.1 Legionella lansingensis
391 565494 565730 + NZ_CP048602.1 Halomonas piezotolerans
392 795805 796041 + NZ_LR134365.1 Cardiobacterium hominis
393 582392 582628 + NZ_CP072793.1 Thiothrix unzii
394 4193089 4193325 - NZ_CP011835.1 Azotobacter chroococcum
395 132334 132570 + NZ_CP031416.1 Gallaecimonas mangrovi
396 271164 271400 - NZ_AP018725.1 Sulfuriflexus mobilis
397 166858 167091 + NZ_CP007039.1 Pseudomonas cichorii JBC1
398 607135 607371 - NZ_CP021323.1 Kushneria konosiri
399 2701009 2701245 + NZ_CP021358.1 Kushneria marisflavi
400 579659 579895 + NZ_CP060009.1 Pseudomonas sediminis
401 2189019 2189255 + NZ_AP020335.1 Hydrogenovibrio marinus
402 218904 219140 - NZ_CP038017.1 Allofrancisella frigidaquae
403 219641 219877 - NZ_CP038241.1 Allofrancisella inopinata
404 3246537 3246773 - NZ_CP013189.1 Pseudohongiella spirulinae
405 334282 334518 - NZ_CP059082.1 Halomonas titanicae
406 1076915 1077151 + NZ_CP007142.1 Gynuella sunshinyii YC6258
407 5912158 5912394 - NZ_CP043311.1 Pseudomonas lalkuanensis
408 170202 170438 + NZ_AP022642.1 Pseudomonas otitidis
409 371916 372152 + NZ_CP061941.1 Marinomonas algicola
410 1341744 1341980 + NZ_CP042382.1 Pistricoccus aurantiacus
411 258642 258875 + NZ_CP068034.2 Pseudomonas syringae
412 22054 22287 - NZ_CP067022.1 Pseudomonas cannabina pv. alisalensis
413 172234 172467 + NZ_CP042804.1 Pseudomonas amygdali pv. tabaci str. ATCC 11528
414 110860 111093 + NC_004578.1 Pseudomonas syringae pv. tomato str. DC3000
415 2524484 2524720 - NZ_CP014476.1 Methylomonas denitrificans
416 1129796 1130032 + NZ_CP012505.1 Francisella persica ATCC VR-331
417 2952013 2952249 - NZ_LR134374.1 Legionella spiritensis
418 3203767 3204003 - NZ_CP014226.1 Halomonas chromatireducens
419 301915 302151 - NC_017449.1 Francisella hispaniensis
420 2699232 2699468 + NZ_CP016397.1 Legionella clemsonensis
421 578156 578392 - NZ_LN681225.1 Legionella hackeliae
422 1487678 1487914 + NZ_CP022375.1 Francisella opportunistica
423 350305 350541 - NC_023029.1 Francisella orientalis LADL--07-285A
424 2985436 2985672 - NZ_AP021881.1 Sulfuriferula nivalis
425 910043 910279 + NZ_AP014545.1 Amphritea japonica ATCC BAA-1530
426 1435015 1435251 - NZ_CP012362.1 Oblitimonas alkaliphila
427 952306 952539 - NZ_CP041352.1 Casimicrobium huifangae
428 560040 560276 + NZ_CP013106.1 Halomonas huangheensis
429 127142 127375 - NZ_CP062158.2 Pseudomonas lundensis
430 6203979 6204215 - NZ_CP056030.1 Pseudomonas eucalypticola
431 6628616 6628849 - NZ_CP061079.1 Pseudomonas chlororaphis
432 6664810 6665046 - NZ_LS999205.1 Pseudomonas protegens CHA0
433 43758 43994 + NZ_AP018724.1 Sulfurivermis fontis
434 18392 18628 - NZ_CP046621.1 Pseudomonas alkylphenolica
435 18483 18719 - NZ_CP071706.1 Pseudomonas donghuensis
436 5794801 5795037 - NZ_CP022562.1 Pseudomonas monteilii
437 6048521 6048757 - NC_021505.1 Pseudomonas putida NBRC 14164
438 4791226 4791462 - NZ_CP009365.1 Pseudomonas soli
439 348754 348990 - NC_015696.1 Francisella salina
440 1450347 1450583 + NZ_CP043552.1 Francisella marina
441 782537 782773 - NZ_CP031222.1 Aquirhabdus parva
442 977169 977402 - NZ_AP022345.1 Fluviibacter phosphoraccumulans
443 1045565 1045801 - NZ_LR778301.1 Denitratisoma oestradiolicum
444 18305 18538 - NZ_CP054205.1 Pseudomonas rhodesiae
445 154341 154577 + NZ_AP017372.2 Halorhodospira halochloris
446 3605594 3605830 - NZ_CP054301.1 Marinomonas primoryensis
447 5722609 5722842 - NZ_CP027723.1 Pseudomonas orientalis
448 6334971 6335204 - NZ_CP027756.1 Pseudomonas synxantha
449 18567 18800 - NZ_CP051487.1 Pseudomonas umsongensis
450 6630204 6630437 - NZ_CP014870.1 Pseudomonas silesiensis
451 6661310 6661543 - NZ_CP018420.1 Pseudomonas veronii
452 86349 86573 - NC_004545.1 Buchnera aphidicola str. Bp (Baizongia pistaciae)
453 373836 374072 - NZ_CP022132.1 Francisella halioticida
454 3328172 3328405 - NZ_CP014262.1 Pseudomonas corrugata
455 6120229 6120462 - NZ_CP029608.1 Pseudomonas kribbensis
456 4897957 4898190 + NZ_CP014205.2 Pseudomonas glycinae
457 6371499 6371732 - NZ_CP062253.1 Pseudomonas gozinkensis
458 6349523 6349756 - NZ_CP062252.1 Pseudomonas allokribbensis
459 6469552 6469785 - NZ_CP035088.1 Pseudomonas viciae
460 4398924 4399157 + NZ_CP048810.1 Pseudomonas bijieensis
461 6553401 6553634 - NZ_CP034725.1 Pseudomonas brassicacearum
462 233902 234138 + NC_008260.1 Alcanivorax borkumensis SK2
463 2945514 2945750 - NZ_CP045571.1 Acidithiobacillus thiooxidans ATCC 19377
464 2011430 2011663 - NZ_CP022989.1 Paraburkholderia aromaticivorans
465 3545119 3545352 + NC_010681.1 Paraburkholderia phytofirmans PsJN
466 3737096 3737329 + NZ_CP009533.1 Pseudomonas rhizosphaerae
467 4618559 4618792 - NZ_CP012676.1 Pseudomonas versuta
468 850808 851041 - NZ_CP049044.1 Pseudomonas psychrophila
469 328121 328354 + NZ_CP070503.1 Pseudomonas atacamensis
470 5918759 5918992 - NZ_CP023272.1 Pseudomonas lurida
471 5961226 5961459 - NZ_CP010896.1 Pseudomonas simiae
472 4088858 4089091 + NZ_CP005960.1 Pseudomonas mandelii JR-1
473 4089325 4089558 + NZ_CP005960.1 Pseudomonas mandelii JR-1
474 6797027 6797260 + NZ_CP012400.2 Pseudomonas yamanorum
475 120171 120407 + NZ_CP010427.1 Allofrancisella guangzhouensis
476 4480947 4481183 - NC_016112.1 Methylotuvimicrobium alcaliphilum 20Z
477 4740871 4741107 - NZ_CP035467.1 Methylotuvimicrobium buryatense
478 3418753 3418989 + NZ_AP021884.1 Sulfuriferula plumbiphila
479 1296019 1296252 - NZ_CP013481.2 Pandoraea apista
480 1955713 1955946 - NZ_CP047385.1 Pandoraea fibrosis
481 2474669 2474905 + NZ_CP070273.1 Marinomonas foliarum
482 576234 576470 + NZ_CP061081.1 Marinomonas arctica
483 3780744 3780980 + NZ_CP031146.1 Pseudomonas plecoglossicida
484 5747999 5748235 - NC_008027.1 Pseudomonas entomophila L48
485 599377 599613 + NC_015942.1 Acidithiobacillus ferrivorans SS3
486 615805 616041 - NZ_AP018795.1 Acidithiobacillus ferridurans
487 2371072 2371308 - NC_011761.1 Acidithiobacillus ferrooxidans ATCC 23270
488 2358079 2358315 - NZ_CP026328.2 Acidithiobacillus caldus
489 371431 371667 - NZ_CP016796.1 Francisella uliginis
490 758806 759042 - NZ_CP010554.1 Rugosibacter aromaticivorans
491 750486 750719 - NZ_CP022579.1 Oryzomicrobium terrae
492 201297 201533 - NC_013851.1 Allochromatium vinosum DSM 180
493 4934953 4935186 + NZ_CP024645.1 Rhizobacter gummiphilus
494 2337639 2337872 + NZ_CP029640.1 Paraburkholderia dokdonella
495 2428286 2428519 + NZ_CP046909.1 Paraburkholderia acidiphila
496 3476504 3476740 + NC_010170.1 Bordetella petrii
497 1098968 1099204 - NZ_AP012547.1 Sulfuritalea hydrogenivorans sk43H
498 2410452 2410685 + NZ_CP046913.1 Paraburkholderia acidisoli
499 1088879 1089112 - NZ_CP031124.1 Ephemeroptericola cinctiostellae
500 632599 632832 - NZ_CP009795.1 Burkholderia dolosa AU0158
501 2816383 2816616 + NZ_CP009832.1 Burkholderia multivorans ATCC BAA-247
502 662831 663064 - NC_010622.1 Paraburkholderia phymatum STM815
503 2779012 2779245 + NZ_CP013398.1 Burkholderia seminalis
504 1583143 1583376 + NZ_CP035900.1 Burkholderia glumae
505 2849104 2849337 + NZ_CP013401.1 Burkholderia metallica
506 546106 546339 + NZ_CP011503.1 Burkholderia pyrrocinia
507 2852536 2852769 + NZ_CP013450.1 Burkholderia cenocepacia
508 2919597 2919830 + NZ_CP045235.1 Burkholderia cepacia
509 2948017 2948250 + NC_007510.1 Burkholderia lata
510 2993501 2993734 + NZ_CP013459.1 Burkholderia stagnalis
511 2943948 2944181 + NZ_CP020737.1 Paraburkholderia acidophila
512 3161871 3162104 + NZ_CP013414.1 Burkholderia ubonensis
513 3459228 3459461 + NZ_CP002580.1 Burkholderia plantarii
514 174405 174641 - NZ_CP016268.1 Woeseia oceani
515 684232 684465 - NZ_CP026111.1 Paraburkholderia terrae
516 1309380 1309613 + NZ_CP015958.1 Paraburkholderia caribensis
517 4049442 4049678 + NZ_CP016172.1 Bordetella flabilis
518 776842 777078 - NC_019940.1 Thioflavicoccus mobilis 8321
519 4569844 4570080 - NZ_LR134302.1 Achromobacter spanius
520 584528 584761 - NZ_CP011568.3 Pandoraea thiooxydans
521 827019 827252 + NZ_CP058952.1 Chitinibacter fontanus
522 275208 275441 + NZ_CP068286.1 Ralstonia syzygii subsp. celebesensis
523 1053151 1053384 + NZ_CP012943.1 Ralstonia solanacearum
524 4976452 4976685 + NZ_CP013480.3 Pandoraea norimbergensis
525 1187406 1187639 - NZ_CP027792.1 Pulveribacter suum
526 3179672 3179905 + NZ_CP024934.1 Paraburkholderia graminis
527 3202726 3202962 + NZ_CP053986.1 Achromobacter denitrificans
528 1240810 1241046 - NZ_HG916765.1 Castellaniella defragrans 65Phen
529 2330020 2330253 + NZ_CP040709.1 Inhella inkyongensis
530 809242 809475 - NC_010524.1 Leptothrix cholodnii SP-6
531 2694312 2694545 + NZ_CP019240.1 Rhodoferax antarcticus
532 898408 898641 - NC_007651.1 Burkholderia thailandensis E264
533 928578 928811 + NZ_CP011257.1 Ralstonia mannitolilytica
534 50483 50716 - NZ_CP017561.1 Paraburkholderia sprentiae WSM5005
535 1117773 1118009 - NZ_CP016440.1 Bordetella pseudohinzii
536 2861763 2861999 - NZ_CP021395.1 Bordetella hinzii
537 1814325 1814561 - NZ_CP038034.1 Achromobacter insolitus
538 2770673 2770906 + NZ_CP016022.1 Ralstonia insidiosa
539 711216 711452 - NZ_CP043146.1 Bordetella holmesii
540 1194269 1194502 - NC_008825.1 Methylibium petroleiphilum PM1
541 545716 545952 - NZ_CP022987.1 Pusillimonas thiosulfatoxidans
542 3518514 3518747 + NC_007908.1 Rhodoferax ferrireducens T118
543 2680313 2680549 + NC_010645.1 Bordetella avium 197N
544 2182682 2182918 - NZ_AP018721.1 Sulfuritortus calidifontis
545 2478056 2478289 + NZ_CP049134.1 Paraburkholderia tropica
546 686121 686354 - NZ_CP051461.1 Polaromonas vacuolata
547 1167026 1167259 - NZ_CP035503.1 Rhodoferax sediminis
548 1910261 1910494 - NZ_AP014569.1 Serpentinomonas mccroryi
549 1176042 1176275 + NZ_LT615228.1 Polynucleobacter necessarius
550 1683028 1683261 + NZ_CP007501.1 Polynucleobacter duraquae
551 1805766 1805999 + NC_009379.1 Polynucleobacter asymbioticus QLW-P1DMWA-1
552 3819880 3820113 + NZ_CP043046.1 Pigmentiphaga aceris
553 2789538 2789774 - NZ_CP037953.1 Permianibacter aggregans
554 2399582 2399818 + NC_018518.1 Bordetella pertussis 18323
555 3173987 3174220 + NZ_CP019239.1 Rhodoferax saidenbachensis
556 2329932 2330165 - NZ_CP013729.1 Roseateles depolymerans
557 1925637 1925870 - NZ_AP014568.1 Serpentinomonas raichei
558 2860429 2860662 + NZ_CP029210.1 Aquabacterium olei
559 1645173 1645406 + NZ_CP023276.1 Polynucleobacter difficilis
560 3108406 3108639 - NZ_CP041730.1 Chitinimonas arctica
561 1254589 1254822 - NZ_CP009727.1 Burkholderia mallei
562 777617 777850 + NZ_CP008781.1 Burkholderia pseudomallei
563 3078772 3079008 + NZ_LT907988.1 Orrella dioscoreae
564 1876568 1876804 - NZ_CP016171.1 Bordetella bronchialis
565 532023 532256 - NC_014722.1 Mycetohabitans rhizoxinica HKI 454
566 3415576 3415809 + NC_008781.1 Polaromonas naphthalenivorans CJ2
567 3686811 3687044 + NZ_CP062803.1 Cupriavidus basilensis
568 2375386 2375622 - NZ_CP022684.1 Ketobacter alkanivorans
569 2582408 2582641 - NZ_CP022423.1 Vitreoscilla filiformis
570 780085 780318 + NZ_CP009555.1 Burkholderia oklahomensis C6786
571 1170650 1170886 - NZ_AP019378.1 Bordetella parapertussis
572 3219230 3219466 + NZ_LR134326.1 Bordetella bronchiseptica
573 1974450 1974683 - NZ_CP019236.1 Rhodoferax koreense
574 689645 689878 + NZ_CP027669.1 Simplicispira suum
575 3674035 3674268 - NZ_CP064781.1 Azospira restricta
576 3067933 3068166 + NZ_CP021359.1 Acidovorax carolinensis
577 1197658 1197891 - NZ_CP017476.1 Hydrogenophaga crassostreae
578 3783565 3783801 - NZ_CP034464.1 Undibacterium parvum
++ More..
Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_LR134373.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF00471.22 1.0 573 13 same-strand Ribosomal protein L33
2 PF04002.17 0.75 433 239 same-strand RadC-like JAB domain
3 PF04127.17 0.67 387 1094 opposite-strand DNA / pantothenate metabolism flavoprotein
4 PF02441.21 0.67 387 1094 opposite-strand Flavoprotein
++ More..