Result : Q7VR69
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 50S ribosomal protein L35 |
| NCBI Accession ID | BX248583.1 |
| Organism | Blochmannia floridanus |
| Left | 390531 |
| Right | 390728 |
| Strand | + |
| Nucleotide Sequence | ATGCCTAAAATTAAAACATCGCGGAGCGCTAGTAAAAGATTTAAAAGGTTATCTTCAAATAAATATAAATTTAAACACGCATACGCAAGGCACATTCTAACAAAAAAATCTACAAAACACAAACGACACTTGCGCATAAAATCTATTTTATCTAAAAAAAATAACAGAAAAATCATGAAATATTTACCATATATATAA |
| Sequence | MPKIKTSRSASKRFKRLSSNKYKFKHAYARHILTKKSTKHKRHLRIKSILSKKNNRKIMKYLPYI |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl00392. Profile Description: Ribosomal protein L35. This ribosomal protein is found in bacteria and organelles only. It is not closely related to any eukaryotic or archaeal ribosomal protein. [Protein synthesis, Ribosomal proteins: synthesis and modification] |
| Pubmed ID | 12886019 |
| Domain | CDD:412354 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | Q7VR69 |
| ORF Length (Amino Acid) | 65 |
++ More..
| Conservation Analysis |
No. of Species: 388
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 2381381 | 2381578 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 2 | 1443413 | 1443610 | - | NZ_CP016176.1 | Xenorhabdus hominickii |
| 3 | 2515112 | 2515309 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 4 | 133189 | 133386 | + | NC_004545.1 | Buchnera aphidicola str. Bp (Baizongia pistaciae) |
| 5 | 2616436 | 2616633 | - | NC_017554.1 | Pantoea ananatis PA13 |
| 6 | 145462 | 145659 | + | NZ_CP049115.1 | Pantoea stewartii |
| 7 | 2230736 | 2230933 | + | NZ_CP038498.1 | Pectobacterium punjabense |
| 8 | 3823926 | 3824123 | + | NZ_CP047495.1 | Pectobacterium brasiliense |
| 9 | 2556888 | 2557085 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 10 | 2651297 | 2651494 | - | NZ_CP034938.1 | Pectobacterium odoriferum |
| 11 | 1040739 | 1040936 | + | NZ_CP017482.1 | Pectobacterium polaris |
| 12 | 1498468 | 1498665 | + | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 13 | 1764824 | 1765021 | + | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 14 | 1967411 | 1967608 | + | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 15 | 2693417 | 2693614 | - | NZ_LR134201.1 | Cedecea lapagei |
| 16 | 2098806 | 2099003 | + | NC_012962.1 | Photorhabdus asymbiotica |
| 17 | 4171566 | 4171763 | + | NZ_CP011104.1 | Photorhabdus thracensis |
| 18 | 1786854 | 1787051 | + | NZ_LN907827.1 | Erwinia gerundensis |
| 19 | 1716111 | 1716308 | + | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 20 | 2088455 | 2088652 | - | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 21 | 1813429 | 1813626 | + | NZ_CP023567.1 | Erwinia pyrifoliae |
| 22 | 2298830 | 2299027 | - | NZ_CP045720.1 | Pantoea eucalypti |
| 23 | 2293662 | 2293859 | - | NZ_CP038853.1 | Pantoea vagans |
| 24 | 1952834 | 1953031 | - | NZ_CP060401.1 | Xenorhabdus nematophila |
| 25 | 2132079 | 2132276 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 26 | 1637740 | 1637937 | + | NZ_CP029185.2 | Limnobaculum parvum |
| 27 | 1717203 | 1717400 | + | NZ_LR134531.1 | Pragia fontium |
| 28 | 1648330 | 1648527 | + | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 29 | 2171394 | 2171591 | + | NZ_CP050150.1 | Hafnia alvei |
| 30 | 1435461 | 1435658 | + | NZ_CP040449.1 | Aeromonas simiae |
| 31 | 1892060 | 1892257 | + | NZ_AP022508.1 | Enterobacter bugandensis |
| 32 | 1886755 | 1886952 | + | NC_015968.1 | Enterobacter soli |
| 33 | 670145 | 670342 | + | NZ_CP038469.1 | Citrobacter tructae |
| 34 | 1130254 | 1130451 | + | NZ_CP017279.1 | Enterobacter ludwigii |
| 35 | 1579816 | 1580013 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 36 | 252765 | 252962 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 37 | 4817536 | 4817733 | + | NZ_CP033744.1 | Citrobacter freundii |
| 38 | 3572120 | 3572317 | + | NZ_LT556085.1 | Citrobacter amalonaticus |
| 39 | 3427488 | 3427685 | - | NZ_CP045205.1 | Citrobacter telavivensis |
| 40 | 1100842 | 1101039 | + | NC_010554.1 | Proteus mirabilis HI4320 |
| 41 | 3118852 | 3119049 | + | NZ_CP026364.1 | Proteus hauseri |
| 42 | 1601618 | 1601815 | + | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 43 | 3410189 | 3410386 | - | NZ_CP023536.1 | Providencia alcalifaciens |
| 44 | 2679315 | 2679512 | - | NZ_CP048796.1 | Providencia vermicola |
| 45 | 2491329 | 2491526 | + | NZ_CP029736.1 | Providencia rettgeri |
| 46 | 1065422 | 1065619 | + | NZ_CP031123.2 | Providencia huaxiensis |
| 47 | 2298327 | 2298524 | + | NZ_CP065044.1 | Pectobacterium aroidearum |
| 48 | 2930817 | 2931014 | - | NZ_CP023525.1 | Cedecea neteri |
| 49 | 1761080 | 1761277 | + | NZ_LS483470.1 | Leminorella richardii |
| 50 | 2510637 | 2510834 | - | NZ_CP025799.1 | Dickeya zeae |
| 51 | 2599346 | 2599543 | - | NZ_LS483422.1 | Providencia heimbachae |
| 52 | 2631981 | 2632178 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 53 | 2347425 | 2347622 | + | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 54 | 1732862 | 1733059 | - | NZ_CP015749.1 | Pectobacterium parmentieri |
| 55 | 4020613 | 4020810 | + | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 56 | 1761848 | 1762045 | + | NZ_CP034148.1 | Pantoea agglomerans |
| 57 | 1913067 | 1913264 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 58 | 249418 | 249615 | + | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 59 | 2335260 | 2335457 | + | NZ_LR134494.1 | Serratia quinivorans |
| 60 | 2241662 | 2241859 | + | NC_015567.1 | Serratia plymuthica AS9 |
| 61 | 679141 | 679338 | + | NZ_CP015031.1 | Basfia succiniciproducens |
| 62 | 1038996 | 1039193 | + | NC_006300.1 | [Mannheimia] succiniciproducens MBEL55E |
| 63 | 3623271 | 3623468 | - | NZ_CP023706.1 | Edwardsiella tarda |
| 64 | 1947087 | 1947284 | - | NZ_CP016043.1 | Edwardsiella hoshinae |
| 65 | 1818250 | 1818447 | + | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 66 | 3870959 | 3871156 | - | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 67 | 2519523 | 2519720 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 68 | 2025506 | 2025703 | + | NZ_CP042220.2 | Dickeya poaceiphila |
| 69 | 2502899 | 2503096 | - | NZ_LT615367.1 | Dickeya aquatica |
| 70 | 2235725 | 2235922 | + | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 71 | 171681 | 171878 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 72 | 2593297 | 2593494 | - | NC_014500.1 | Dickeya dadantii 3937 |
| 73 | 3852904 | 3853101 | - | NZ_CP019706.1 | Pantoea alhagi |
| 74 | 2019843 | 2020040 | + | NZ_CP061511.1 | Mixta calida |
| 75 | 2070909 | 2071106 | + | NZ_CP026377.1 | Mixta gaviniae |
| 76 | 1212126 | 1212323 | + | NZ_CP028271.1 | Mixta intestinalis |
| 77 | 4496166 | 4496363 | + | NZ_CP011254.1 | Serratia fonticola |
| 78 | 1959148 | 1959345 | + | NZ_CP054058.1 | Scandinavium goeteborgense |
| 79 | 2507604 | 2507801 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 80 | 833179 | 833376 | - | NZ_CP009787.1 | Yersinia rohdei |
| 81 | 3310990 | 3311187 | + | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 82 | 2137100 | 2137297 | + | NZ_CP043727.1 | Yersinia canariae |
| 83 | 2519676 | 2519873 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 84 | 2467199 | 2467396 | - | NZ_CP046293.1 | Yersinia intermedia |
| 85 | 2030785 | 2030982 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 86 | 3652858 | 3653055 | + | NZ_CP042941.1 | Atlantibacter hermannii |
| 87 | 4762785 | 4762982 | - | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 88 | 571393 | 571590 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 89 | 1900691 | 1900888 | + | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 90 | 1644862 | 1645059 | + | NZ_CP032487.1 | Yersinia hibernica |
| 91 | 4341193 | 4341390 | - | NZ_CP007230.1 | Yersinia similis |
| 92 | 2430534 | 2430731 | - | NC_012880.1 | Musicola paradisiaca Ech703 |
| 93 | 2594866 | 2595063 | - | NZ_CP045875.1 | Heliorestis convoluta |
| 94 | 1895358 | 1895555 | - | NC_012691.1 | Tolumonas auensis DSM 9187 |
| 95 | 1545941 | 1546138 | - | NZ_CP027107.1 | Cronobacter sakazakii |
| 96 | 2330588 | 2330785 | - | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 97 | 1834396 | 1834593 | + | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 98 | 1840924 | 1841121 | + | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 99 | 2167938 | 2168135 | - | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 100 | 1955157 | 1955354 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 101 | 1866760 | 1866957 | + | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 102 | 2029538 | 2029735 | + | NZ_LR134340.1 | Escherichia marmotae |
| 103 | 4388366 | 4388563 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 104 | 3826610 | 3826807 | + | NZ_CP053416.1 | Salmonella bongori |
| 105 | 335778 | 335975 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 106 | 1547009 | 1547206 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 107 | 1799802 | 1799999 | - | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 108 | 1734189 | 1734386 | - | NZ_AP014857.1 | Escherichia albertii |
| 109 | 2647682 | 2647879 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 110 | 2544718 | 2544915 | - | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 111 | 1925322 | 1925519 | + | NZ_CP027986.1 | Enterobacter sichuanensis |
| 112 | 1666433 | 1666630 | - | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 113 | 1860535 | 1860732 | + | NZ_CP017184.1 | Enterobacter roggenkampii |
| 114 | 2790649 | 2790846 | - | NZ_CP013990.1 | Leclercia adecarboxylata |
| 115 | 633653 | 633850 | - | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 116 | 1920363 | 1920560 | + | NZ_CP009756.1 | Enterobacter cloacae |
| 117 | 1414763 | 1414960 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 118 | 1023817 | 1024014 | - | NZ_CP016337.1 | Kosakonia sacchari |
| 119 | 2101706 | 2101903 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 120 | 975196 | 975393 | - | NZ_CP045300.1 | Kosakonia arachidis |
| 121 | 2141685 | 2141882 | + | NZ_CP043318.1 | Enterobacter chengduensis |
| 122 | 3049591 | 3049788 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 123 | 2077196 | 2077393 | + | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 124 | 2190916 | 2191113 | + | NZ_CP041247.1 | Raoultella electrica |
| 125 | 3160025 | 3160222 | - | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 126 | 1434507 | 1434704 | + | NC_013716.1 | Citrobacter rodentium ICC168 |
| 127 | 3915125 | 3915322 | - | NZ_CP020388.1 | Pluralibacter gergoviae |
| 128 | 3126125 | 3126322 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 129 | 2686332 | 2686529 | + | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 130 | 4998492 | 4998689 | - | NZ_CP026047.1 | Raoultella planticola |
| 131 | 2399652 | 2399849 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 132 | 1423745 | 1423942 | + | NZ_CP011602.1 | Phytobacter ursingii |
| 133 | 2129050 | 2129247 | + | NZ_CP054254.1 | Klebsiella variicola |
| 134 | 2271115 | 2271312 | + | NZ_CP046672.1 | Raoultella ornithinolytica |
| 135 | 2278704 | 2278901 | + | NZ_CP050508.1 | Raoultella terrigena |
| 136 | 2058348 | 2058545 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 137 | 2438850 | 2439047 | + | NZ_CP060111.1 | Klebsiella michiganensis |
| 138 | 2491027 | 2491224 | + | NZ_CP036175.1 | Klebsiella huaxiensis |
| 139 | 561810 | 562007 | - | NZ_CP040863.1 | Rodentibacter heylii |
| 140 | 3613254 | 3613451 | + | NZ_CP065640.1 | Serratia rubidaea |
| 141 | 2828448 | 2828645 | - | NZ_CP071320.1 | Serratia ureilytica |
| 142 | 1582807 | 1583004 | + | NZ_CP016948.1 | Serratia surfactantfaciens |
| 143 | 2319903 | 2320100 | + | NZ_LT906479.1 | Serratia ficaria |
| 144 | 2280306 | 2280503 | + | NZ_CP038662.1 | Serratia nematodiphila |
| 145 | 2261665 | 2261862 | + | NZ_CP048784.1 | Serratia liquefaciens |
| 146 | 3850293 | 3850490 | - | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 147 | 476234 | 476431 | + | NZ_CP016180.1 | Pasteurella skyensis |
| 148 | 526308 | 526505 | + | NC_012108.1 | Desulfobacterium autotrophicum HRM2 |
| 149 | 545290 | 545487 | + | NC_018645.1 | Desulfobacula toluolica Tol2 |
| 150 | 3480462 | 3480659 | + | NZ_CP040428.1 | Jejubacter calystegiae |
| 151 | 1648178 | 1648375 | + | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 152 | 1806920 | 1807117 | + | NZ_CP015581.1 | Tatumella citrea |
| 153 | 3121427 | 3121624 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 154 | 3193609 | 3193806 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 155 | 1492024 | 1492221 | - | NZ_CP009610.1 | Haemophilus influenzae |
| 156 | 1436945 | 1437142 | + | NZ_LS483458.1 | Haemophilus haemolyticus |
| 157 | 1578548 | 1578745 | - | NZ_LS483429.1 | Haemophilus aegyptius |
| 158 | 1791016 | 1791213 | + | NC_010337.2 | Heliomicrobium modesticaldum Ice1 |
| 159 | 378480 | 378677 | + | NZ_CP007715.1 | Actinobacillus equuli subsp. equuli |
| 160 | 368780 | 368977 | + | NZ_CP009159.1 | Actinobacillus suis ATCC 33415 |
| 161 | 1610375 | 1610572 | + | NZ_LT906463.1 | Haemophilus pittmaniae |
| 162 | 1234001 | 1234198 | + | NZ_CP015425.1 | [Haemophilus] ducreyi |
| 163 | 1366941 | 1367138 | - | NZ_CP016604.1 | Otariodibacter oris |
| 164 | 1202708 | 1202905 | - | NZ_CP016605.1 | Bisgaardia hudsonensis |
| 165 | 774113 | 774310 | - | NZ_CP006944.1 | Mannheimia varigena USDA-ARS-USMARC-1312 |
| 166 | 1981910 | 1982107 | - | NZ_CP015029.1 | Frederiksenia canicola |
| 167 | 1820891 | 1821088 | + | NZ_CP046531.1 | Mannheimia ovis |
| 168 | 1888492 | 1888689 | + | NZ_CP055305.1 | Mannheimia pernigra |
| 169 | 1773058 | 1773255 | - | NZ_LR134167.1 | Avibacterium volantium |
| 170 | 1424416 | 1424613 | - | NZ_CP029206.1 | Actinobacillus porcitonsillarum |
| 171 | 1898176 | 1898373 | - | NC_011852.1 | Glaesserella parasuis SH0165 |
| 172 | 2110077 | 2110274 | - | NZ_CP028926.1 | Pasteurella multocida |
| 173 | 758241 | 758438 | + | NZ_LT906448.1 | Pasteurella dagmatis |
| 174 | 250078 | 250275 | + | NZ_CP030753.1 | Actinobacillus pleuropneumoniae |
| 175 | 660395 | 660592 | + | NZ_CP006954.1 | Bibersteinia trehalosi USDA-ARS-USMARC-188 |
| 176 | 1958933 | 1959130 | + | NZ_CP061280.1 | Mannheimia bovis |
| 177 | 1813170 | 1813367 | - | NZ_CP067057.1 | Rahnella aceris |
| 178 | 1951290 | 1951487 | - | NZ_CP065534.1 | Lonsdalea populi |
| 179 | 1125851 | 1126048 | + | NZ_CP018804.1 | Histophilus somni |
| 180 | 237755 | 237949 | + | NZ_AP018686.1 | Vibrio rumoiensis |
| 181 | 831538 | 831735 | + | NZ_CP012418.1 | Kangiella sediminilitoris |
| 182 | 1717855 | 1718052 | - | NZ_CP025120.1 | Kangiella profundi |
| 183 | 1858802 | 1858999 | - | NC_013166.1 | Kangiella koreensis DSM 16069 |
| 184 | 5159206 | 5159403 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 185 | 818860 | 819057 | + | NZ_CP010975.1 | Kangiella geojedonensis |
| 186 | 1832313 | 1832510 | - | NZ_LR134510.1 | Actinobacillus delphinicola |
| 187 | 1372751 | 1372948 | + | NZ_LS483443.1 | Aggregatibacter segnis ATCC 33393 |
| 188 | 1552298 | 1552495 | + | NZ_LR134327.1 | Aggregatibacter aphrophilus ATCC 33389 |
| 189 | 787146 | 787343 | + | NZ_CP023529.1 | Lelliottia amnigena |
| 190 | 2100531 | 2100728 | + | NZ_CP045845.1 | Kluyvera intermedia |
| 191 | 791092 | 791289 | - | NC_021883.1 | Mannheimia haemolytica USMARC_2286 |
| 192 | 1194725 | 1194919 | - | NZ_CP014782.1 | Shewanella psychrophila |
| 193 | 134604 | 134798 | + | NZ_CP033077.1 | Vibrio zhugei |
| 194 | 824411 | 824605 | - | NZ_CP022742.1 | Vibrio qinghaiensis |
| 195 | 2032125 | 2032319 | + | NZ_CP069213.1 | Shewanella litorisediminis |
| 196 | 2162135 | 2162329 | + | NC_008700.1 | Shewanella amazonensis SB2B |
| 197 | 1667869 | 1668063 | + | NZ_CP020373.1 | Shewanella khirikhana |
| 198 | 1891385 | 1891582 | - | NZ_CP035033.1 | Hydrogenovibrio thermophilus |
| 199 | 2699665 | 2699862 | - | NC_008709.1 | Psychromonas ingrahamii 37 |
| 200 | 3670410 | 3670607 | - | NZ_CP015249.1 | Dokdonella koreensis DS-123 |
| 201 | 2634467 | 2634661 | - | NC_014012.1 | Shewanella violacea DSS12 |
| 202 | 2696532 | 2696726 | - | NC_016901.1 | Shewanella baltica OS678 |
| 203 | 870465 | 870662 | + | NZ_CP044060.1 | Aeromonas veronii |
| 204 | 1068971 | 1069168 | + | NZ_CP065745.1 | Aeromonas allosaccharophila |
| 205 | 2009519 | 2009713 | + | NC_007954.1 | Shewanella denitrificans OS217 |
| 206 | 1580280 | 1580477 | + | NZ_CP017415.1 | Acidihalobacter yilgarnenesis |
| 207 | 2668614 | 2668808 | + | NZ_CP034015.1 | Shewanella livingstonensis |
| 208 | 211291 | 211485 | + | NZ_AP018690.1 | Vibrio aphrogenes |
| 209 | 731689 | 731886 | + | NC_002977.6 | Methylococcus capsulatus str. Bath |
| 210 | 1155166 | 1155363 | + | NC_020541.1 | Rhodanobacter denitrificans |
| 211 | 2066115 | 2066312 | + | NC_014541.1 | Ferrimonas balearica DSM 9799 |
| 212 | 1870730 | 1870924 | - | NC_011312.1 | Aliivibrio salmonicida LFI1238 |
| 213 | 2330922 | 2331119 | + | NZ_CP050851.1 | Aeromonas hydrophila |
| 214 | 2398917 | 2399111 | - | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 215 | 1736535 | 1736732 | - | NZ_AP018725.1 | Sulfuriflexus mobilis |
| 216 | 1155425 | 1155619 | - | NZ_AP014636.1 | Vibrio tritonius |
| 217 | 163319 | 163513 | - | NZ_CP046794.1 | Vibrio metschnikovii |
| 218 | 2391291 | 2391485 | - | NZ_CP022358.1 | Shewanella bicestrii |
| 219 | 2246421 | 2246615 | + | NZ_CP041036.1 | Shewanella polaris |
| 220 | 2402784 | 2402981 | + | NZ_CP026328.2 | Acidithiobacillus caldus |
| 221 | 2218471 | 2218665 | - | NZ_CP037951.1 | Parashewanella tropica |
| 222 | 3036751 | 3036945 | - | NC_010506.1 | Shewanella woodyi ATCC 51908 |
| 223 | 1631211 | 1631408 | - | NZ_LT635479.1 | Lachnoclostridium phocaeense |
| 224 | 250290 | 250487 | + | NZ_CP027002.1 | [Ruminococcus] gnavus ATCC 29149 |
| 225 | 2321628 | 2321825 | - | NZ_LR027880.1 | Roseburia intestinalis L1-82 |
| 226 | 2545384 | 2545578 | - | NZ_CP046378.1 | Shewanella algae |
| 227 | 98442 | 98636 | - | NZ_CP065150.1 | Vibrio kanaloae |
| 228 | 1306546 | 1306740 | + | NC_011753.2 | Vibrio atlanticus |
| 229 | 1356038 | 1356232 | + | NZ_CP039700.1 | Vibrio cyclitrophicus |
| 230 | 1586613 | 1586807 | + | NZ_CP040991.1 | Vibrio furnissii |
| 231 | 986322 | 986516 | - | NZ_CP014034.2 | Vibrio fluvialis |
| 232 | 2318083 | 2318280 | - | NZ_AP017928.1 | Methylocaldum marinum |
| 233 | 2105283 | 2105477 | + | NZ_CP022272.1 | Shewanella marisflavi |
| 234 | 3110410 | 3110607 | - | NZ_CP048044.1 | Xanthomonas citri |
| 235 | 2343689 | 2343883 | - | NC_009092.1 | Shewanella loihica PV-4 |
| 236 | 1195316 | 1195513 | - | NZ_CP059567.1 | Neisseria shayeganii |
| 237 | 775796 | 775993 | - | NZ_CP070062.1 | Coprococcus comes |
| 238 | 1377270 | 1377467 | - | NC_014758.1 | Calditerrivibrio nitroreducens DSM 19672 |
| 239 | 1681919 | 1682116 | + | NZ_CP031325.1 | Neisseria polysaccharea |
| 240 | 1620390 | 1620587 | + | NZ_CP012028.1 | Neisseria gonorrhoeae |
| 241 | 1550362 | 1550559 | + | NZ_CP007445.1 | Gilliamella apicola |
| 242 | 373375 | 373572 | + | NZ_CP021520.1 | Neisseria meningitidis |
| 243 | 2975694 | 2975888 | - | NZ_CP014056.2 | Grimontia hollisae |
| 244 | 1385487 | 1385684 | - | NC_016630.1 | Filifactor alocis ATCC 35896 |
| 245 | 1766793 | 1766990 | - | NZ_LR699011.1 | Roseburia hominis |
| 246 | 569214 | 569408 | + | NZ_CP009355.1 | Vibrio tubiashii ATCC 19109 |
| 247 | 4380666 | 4380863 | - | NZ_CP022464.2 | Enterocloster bolteae |
| 248 | 728029 | 728226 | + | NC_015519.1 | Tepidanaerobacter acetatoxydans Re1 |
| 249 | 4633753 | 4633947 | + | NZ_CP036200.1 | Shewanella maritima |
| 250 | 763173 | 763367 | - | NZ_CP041783.1 | Shewanella donghaensis |
| 251 | 2429089 | 2429283 | + | NZ_CP020472.1 | Shewanella japonica |
| 252 | 282376 | 282573 | + | NZ_CP072524.1 | Neisseria sicca |
| 253 | 456857 | 457054 | + | NZ_CP045798.1 | Thermoanaerosceptrum fracticalcis |
| 254 | 2652459 | 2652653 | + | NZ_CP037952.1 | Parashewanella spongiae |
| 255 | 490686 | 490880 | + | NZ_LT960611.1 | Vibrio tapetis subsp. tapetis |
| 256 | 892994 | 893191 | + | NZ_AP021888.1 | Thiosulfativibrio zosterae |
| 257 | 1274657 | 1274854 | - | NZ_CP031252.1 | Neisseria elongata |
| 258 | 2468418 | 2468615 | - | NZ_CP059571.1 | Neisseria bacilliformis |
| 259 | 855914 | 856111 | + | NZ_CP009056.1 | Frischella perrara |
| 260 | 2588716 | 2588910 | + | NC_011566.1 | Shewanella piezotolerans WP3 |
| 261 | 2570237 | 2570431 | + | NC_009831.1 | Shewanella sediminis HAW-EB3 |
| 262 | 2499272 | 2499469 | - | NZ_CP028897.1 | Dongshaea marina |
| 263 | 378717 | 378914 | - | NZ_LR134533.1 | Neisseria weaveri |
| 264 | 1488312 | 1488509 | - | NZ_LR134516.1 | Neisseria animaloris |
| 265 | 2310878 | 2311075 | - | NZ_LT906434.1 | Neisseria zoodegmatis |
| 266 | 2468678 | 2468875 | - | NZ_AP022853.1 | Sulfurimicrobium lacus |
| 267 | 1591668 | 1591865 | - | NC_006138.1 | Desulfotalea psychrophila LSv54 |
| 268 | 2791642 | 2791839 | - | NZ_CP053627.1 | Xylella taiwanensis |
| 269 | 2740031 | 2740225 | - | NC_009901.1 | Shewanella pealeana ATCC 700345 |
| 270 | 2439942 | 2440136 | + | NC_010334.1 | Shewanella halifaxensis HAW-EB4 |
| 271 | 1393334 | 1393528 | + | NZ_CP032093.1 | Vibrio alfacsensis |
| 272 | 2098968 | 2099162 | - | NC_009922.1 | Alkaliphilus oremlandii OhILAs |
| 273 | 1777935 | 1778132 | + | NZ_CP059565.1 | Neisseria wadsworthii |
| 274 | 920656 | 920850 | - | NZ_CP016415.1 | Vibrio scophthalmi |
| 275 | 2091457 | 2091654 | - | NZ_CP031700.1 | Neisseria zalophi |
| 276 | 2325471 | 2325665 | - | NC_013456.1 | Vibrio antiquarius |
| 277 | 2345227 | 2345424 | + | NC_011768.1 | Desulfatibacillum aliphaticivorans |
| 278 | 1554315 | 1554509 | - | NZ_CP009977.1 | Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 |
| 279 | 453797 | 453994 | - | NZ_CP019448.1 | Simonsiella muelleri ATCC 29453 |
| 280 | 3211173 | 3211370 | - | NZ_CP036170.1 | [Clostridium] scindens ATCC 35704 |
| 281 | 2127377 | 2127574 | - | NZ_LR134313.1 | Neisseria canis |
| 282 | 1921318 | 1921515 | - | NZ_LT906477.1 | Clostridium cochlearium |
| 283 | 1429763 | 1429960 | + | NZ_CP059564.1 | Alysiella filiformis |
| 284 | 2468582 | 2468779 | - | NC_014376.1 | [Clostridium] saccharolyticum WM1 |
| 285 | 1321304 | 1321501 | + | NZ_LT906482.1 | Eikenella corrodens |
| 286 | 3478734 | 3478931 | - | NZ_CP015136.1 | Luteitalea pratensis |
| 287 | 2509242 | 2509439 | - | NZ_CP040058.1 | Anaerostipes rhamnosivorans |
| 288 | 1119185 | 1119382 | + | NZ_CP036345.1 | Anaerostipes caccae L1-92 |
| 289 | 669834 | 670028 | - | NZ_CP046269.1 | Vibrio spartinae |
| 290 | 193045 | 193242 | + | NZ_CP038018.1 | Eikenella exigua |
| 291 | 3718865 | 3719062 | + | NC_020304.1 | Desulfocapsa sulfexigens DSM 10523 |
| 292 | 1717279 | 1717470 | + | NC_021184.1 | Desulfoscipio gibsoniae DSM 7213 |
| 293 | 1306011 | 1306208 | + | NZ_CP032364.1 | Lachnoanaerobaculum umeaense |
| 294 | 640598 | 640795 | + | NZ_AP023367.1 | Anaerocolumna cellulosilytica |
| 295 | 3652404 | 3652601 | - | NZ_CP041660.1 | Catenovulum sediminis |
| 296 | 2771441 | 2771641 | + | NC_014364.1 | Sediminispirochaeta smaragdinae DSM 11293 |
| 297 | 1704457 | 1704654 | - | NC_018012.1 | Thiocystis violascens DSM 198 |
| 298 | 1716769 | 1716966 | - | NZ_CP011367.1 | Thioalkalivibrio versutus |
| 299 | 2129769 | 2129966 | - | NZ_CP036523.1 | Peptacetobacter hiranonis |
| 300 | 3190382 | 3190585 | - | NC_015275.1 | Cellulosilyticum lentocellum DSM 5427 |
| 301 | 2302330 | 2302527 | - | NZ_CP035108.1 | Geovibrio thiophilus |
| 302 | 857823 | 858020 | - | NZ_LR130778.1 | Petrocella atlantisensis |
| 303 | 1413899 | 1414099 | + | NZ_CP072793.1 | Thiothrix unzii |
| 304 | 1138744 | 1138944 | - | NC_015500.1 | Treponema brennaborense DSM 12168 |
| 305 | 4487335 | 4487532 | + | NC_018025.1 | Desulfomonile tiedjei DSM 6799 |
| 306 | 1799850 | 1800050 | + | NZ_CP054142.1 | Treponema parvum |
| 307 | 922479 | 922676 | + | NZ_CP022413.2 | Blautia hansenii DSM 20583 |
| 308 | 810119 | 810316 | + | NZ_CP030280.1 | Blautia argi |
| 309 | 1801998 | 1802195 | + | NZ_CP048000.1 | Anaerocolumna sedimenticola |
| 310 | 4792675 | 4792872 | - | NZ_CP039126.1 | Blautia producta |
| 311 | 1167222 | 1167416 | + | NZ_CP020465.1 | Cognaticolwellia beringensis |
| 312 | 1855257 | 1855451 | - | NZ_CP043420.1 | Kushneria phosphatilytica |
| 313 | 2064728 | 2064925 | + | NC_013943.1 | Denitrovibrio acetiphilus DSM 12809 |
| 314 | 3041095 | 3041289 | - | NC_003910.7 | Colwellia psychrerythraea 34H |
| 315 | 2207861 | 2208058 | + | NZ_LR134378.1 | Lautropia mirabilis |
| 316 | 1434146 | 1434340 | + | NZ_AP012273.1 | Thiolapillus brandeum |
| 317 | 3633515 | 3633712 | - | NZ_CP041335.1 | Chitinolyticbacter meiyuanensis |
| 318 | 199053 | 199247 | + | NZ_CP034759.1 | Litorilituus sediminis |
| 319 | 644290 | 644487 | + | NC_015520.1 | Mahella australiensis 50-1 BON |
| 320 | 3016550 | 3016747 | - | NZ_CP035807.1 | Thiospirochaeta perfilievii |
| 321 | 2493986 | 2494180 | - | NZ_CP043869.1 | Neptunomonas concharum |
| 322 | 916097 | 916294 | - | NZ_CP036150.1 | Oceanispirochaeta crateris |
| 323 | 1924375 | 1924575 | - | NZ_CP013187.1 | Pseudoalteromonas phenolica |
| 324 | 1541152 | 1541352 | - | NC_015577.1 | Treponema azotonutricium ZAS-9 |
| 325 | 1839630 | 1839827 | - | NC_015672.1 | Flexistipes sinusarabici DSM 4947 |
| 326 | 90328 | 90525 | + | NC_016893.1 | Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) |
| 327 | 893027 | 893224 | + | NZ_CP007452.1 | Peptoclostridium acidaminophilum DSM 3953 |
| 328 | 4624337 | 4624534 | + | NZ_CP021904.1 | Alkalitalea saponilacus |
| 329 | 1445060 | 1445260 | + | NZ_LS483476.1 | Lederbergia lentus |
| 330 | 731095 | 731283 | + | NZ_LR134365.1 | Cardiobacterium hominis |
| 331 | 1285840 | 1286037 | - | NZ_CP011412.1 | Sedimenticola thiotaurini |
| 332 | 6154474 | 6154671 | - | NZ_CP061800.1 | Desulfonema magnum |
| 333 | 2344947 | 2345144 | - | NZ_LR134376.1 | Aeromonas encheleia |
| 334 | 1188308 | 1188505 | + | NZ_CP051883.1 | Aeromonas salmonicida |
| 335 | 2480305 | 2480502 | - | NZ_AP022188.1 | Aeromonas media |
| 336 | 947560 | 947754 | + | NZ_CP040676.1 | Exiguobacterium mexicanum |
| 337 | 193022 | 193219 | - | NZ_CP028884.1 | Borrelia turcica IST7 |
| 338 | 1235590 | 1235787 | + | NZ_CP016502.1 | Acetivibrio thermocellus DSM 2360 |
| 339 | 1247113 | 1247310 | + | NZ_CP016210.1 | Azoarcus olearius |
| 340 | 2473329 | 2473529 | - | NZ_CP012024.1 | Bacillus smithii |
| 341 | 1197554 | 1197751 | + | NC_020134.1 | Thermoclostridium stercorarium subsp. stercorarium DSM 8532 |
| 342 | 4593435 | 4593632 | - | NZ_CP007451.1 | Draconibacterium orientale |
| 343 | 533232 | 533426 | + | NZ_AP019736.1 | Alistipes dispar |
| 344 | 2622051 | 2622251 | - | NC_015578.1 | Treponema primitia ZAS-2 |
| 345 | 1899597 | 1899797 | + | NC_015732.1 | Treponema caldarium DSM 7334 |
| 346 | 1476110 | 1476307 | + | NC_014734.1 | Paludibacter propionicigenes WB4 |
| 347 | 2562389 | 2562586 | - | NC_015388.1 | Desulfobacca acetoxidans DSM 11109 |
| 348 | 2002525 | 2002722 | - | NZ_LR590481.1 | Hathewaya histolytica |
| 349 | 2117150 | 2117344 | - | NZ_CP014263.1 | Spirosoma montaniterrae |
| 350 | 1419489 | 1419686 | + | NZ_CP015772.1 | Niabella ginsenosidivorans |
| 351 | 807850 | 808047 | + | NZ_AP018042.1 | Labilibaculum antarcticum |
| 352 | 1801048 | 1801245 | - | NC_014410.1 | Thermoanaerobacterium thermosaccharolyticum DSM 571 |
| 353 | 397711 | 397908 | - | NZ_AP014564.1 | Ichthyobacterium seriolicida |
| 354 | 2150941 | 2151135 | - | NC_010556.1 | Exiguobacterium sibiricum 255-15 |
| 355 | 3104023 | 3104217 | - | NC_002516.2 | Pseudomonas aeruginosa PAO1 |
| 356 | 321311 | 321508 | + | NZ_CP007035.1 | Niabella soli DSM 19437 |
| 357 | 2444070 | 2444267 | + | NZ_CP058952.1 | Chitinibacter fontanus |
| 358 | 381375 | 381569 | - | NZ_CP027432.2 | Caminibacter pacificus |
| 359 | 3510060 | 3510257 | - | NZ_CP032157.1 | Paraflavitalea soli |
| 360 | 4244540 | 4244737 | + | NZ_CP017479.1 | Flavobacterium gilvum |
| 361 | 1625271 | 1625468 | - | NZ_CP059563.1 | Conchiformibius steedae |
| 362 | 6295290 | 6295484 | + | NC_015703.1 | Runella slithyformis DSM 19594 |
| 363 | 1945761 | 1945958 | - | NC_015164.1 | Phocaeicola salanitronis DSM 18170 |
| 364 | 314112 | 314309 | - | NZ_CP046027.1 | Neisseria brasiliensis |
| 365 | 2208345 | 2208542 | + | NZ_CP022389.1 | Capnocytophaga canimorsus |
| 366 | 3906734 | 3906928 | - | NZ_CP060092.1 | Teredinibacter purpureus |
| 367 | 449610 | 449807 | + | NZ_CP042433.1 | Flavisolibacter ginsenosidimutans |
| 368 | 1928473 | 1928667 | + | NC_008255.1 | Cytophaga hutchinsonii ATCC 33406 |
| 369 | 2206263 | 2206463 | + | NC_013061.1 | Pedobacter heparinus DSM 2366 |
| 370 | 2263181 | 2263381 | - | NZ_CP024091.1 | Pedobacter ginsengisoli |
| 371 | 2327013 | 2327210 | - | NZ_CP061703.1 | Mesoflavibacter profundi |
| 372 | 1323506 | 1323703 | - | NC_023035.1 | Salinispira pacifica |
| 373 | 611985 | 612179 | + | NC_018868.3 | Simiduia agarivorans SA1 = DSM 21679 |
| 374 | 1248407 | 1248604 | + | NZ_CP048113.1 | Chitinophaga agri |
| 375 | 3619380 | 3619577 | - | NZ_CP023777.1 | Chitinophaga caeni |
| 376 | 1656967 | 1657161 | + | NZ_CP014864.1 | Microbulbifer thermotolerans |
| 377 | 2433510 | 2433704 | - | NZ_CP019650.1 | Microbulbifer agarilyticus |
| 378 | 2501235 | 2501429 | - | NZ_CP047491.1 | Microbulbifer hydrolyticus |
| 379 | 280023 | 280208 | - | NC_016599.1 | Owenweeksia hongkongensis DSM 17368 |
| 380 | 444301 | 444498 | + | NZ_CP031188.1 | Flavobacterium arcticum |
| 381 | 5318690 | 5318887 | - | NZ_CP019288.1 | Kordia antarctica |
| 382 | 37145 | 37342 | + | NZ_CP039456.1 | Changchengzhania lutea |
| 383 | 1750933 | 1751130 | - | NZ_CP019342.1 | Nonlabens tegetincola |
| 384 | 275435 | 275632 | - | NC_020156.1 | Nonlabens dokdonensis DSW-6 |
| 385 | 2951657 | 2951854 | - | NC_010995.1 | Cellvibrio japonicus Ueda107 |
| 386 | 1522290 | 1522484 | + | NZ_CP014544.1 | Zhongshania aliphaticivorans |
| 387 | 316259 | 316456 | - | NZ_CP045696.1 | Sodaliphilus pleomorphus |
| 388 | 3167314 | 3167511 | + | NZ_CP007202.1 | Siansivirga zeaxanthinifaciens CC-SAMT-1 |
| 389 | 1418256 | 1418450 | - | NC_007503.1 | Carboxydothermus hydrogenoformans Z-2901 |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP006569.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01409.22 | 0.61 | 236 | 728 | same-strand | tRNA synthetases class II core domain (F) |
| 2 | PF02912.20 | 0.6 | 234 | 727 | same-strand | Aminoacyl tRNA synthetase class II, N-terminal domain |
| 3 | PF00453.20 | 1.0 | 388 | 43 | same-strand | Ribosomal protein L20 |
| 4 | PF00707.24 | 0.97 | 378 | 97.0 | same-strand | Translation initiation factor IF-3, C-terminal domain |
| 5 | PF00587.27 | 0.83 | 322 | 645.0 | same-strand | tRNA synthetase class II core domain (G, H, P, S and T) |
| 6 | PF03129.22 | 0.83 | 322 | 645 | same-strand | Anticodon binding domain |
| 7 | PF07973.16 | 0.83 | 321 | 645 | same-strand | Threonyl and Alanyl tRNA synthetase second additional domain |
| 8 | PF02824.23 | 0.81 | 315 | 645 | same-strand | TGS domain |
++ More..