Result : Q7VQV2
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Putative membrane protein insertion efficiency factor |
| NCBI Accession ID | BX248583.1 |
| Organism | Blochmannia floridanus |
| Left | 13776 |
| Right | 14000 |
| Strand | - |
| Nucleotide Sequence | ATGGTATCACTACCAAAATTATCAGCAAAAATCATAATACGGTTAATATACATATATCAAATCGGAATTAGCCCAATATTAGGTCATCATTGTCGTTTTTCAATAACATGTTCCCAATATGGAATTAACTCAATACGCAATTTTGGTATACTAAAAGGTTGTTGGAAAACATGTATACGAATATTAAAATGTCACCCTTTTAATAAAAATGATAACACACAATAA |
| Sequence | MVSLPKLSAKIIIRLIYIYQIGISPILGHHCRFSITCSQYGINSIRNFGILKGCWKTCIRILKCHPFNKNDNTQ |
| Source of smORF | Swiss-Prot |
| Function | Could be involved in insertion of integral membrane proteins into the membrane. {ECO:0000255|HAMAP-Rule:MF_00386}. |
| Pubmed ID | 12886019 |
| Domain | CDD:412414 |
| Functional Category | Others |
| Uniprot ID | Q7VQV2 |
| ORF Length (Amino Acid) | 74 |
++ More..
| Conservation Analysis |
No. of Species: 184
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 4678254 | 4678511 | - | NC_012880.1 | Musicola paradisiaca Ech703 |
| 2 | 4994484 | 4994741 | - | NZ_CP065044.1 | Pectobacterium aroidearum |
| 3 | 4485863 | 4486105 | - | NZ_CP015581.1 | Tatumella citrea |
| 4 | 4890813 | 4891070 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 5 | 4996519 | 4996776 | - | NZ_CP034938.1 | Pectobacterium odoriferum |
| 6 | 791838 | 792098 | + | NZ_CP029736.1 | Providencia rettgeri |
| 7 | 4448675 | 4448932 | + | NZ_LT615367.1 | Dickeya aquatica |
| 8 | 1041076 | 1041336 | + | NZ_CP023536.1 | Providencia alcalifaciens |
| 9 | 4792365 | 4792622 | - | NZ_CP038498.1 | Pectobacterium punjabense |
| 10 | 1631387 | 1631644 | - | NZ_CP047495.1 | Pectobacterium brasiliense |
| 11 | 4914462 | 4914719 | + | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 12 | 3693571 | 3693828 | + | NZ_CP017482.1 | Pectobacterium polaris |
| 13 | 4058477 | 4058734 | + | NZ_CP015749.1 | Pectobacterium parmentieri |
| 14 | 4284399 | 4284659 | - | NZ_LS483422.1 | Providencia heimbachae |
| 15 | 1664531 | 1664788 | + | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 16 | 2825783 | 2826040 | - | NZ_CP049115.1 | Pantoea stewartii |
| 17 | 4585146 | 4585403 | - | NC_017554.1 | Pantoea ananatis PA13 |
| 18 | 4037052 | 4037312 | - | NZ_LR134531.1 | Pragia fontium |
| 19 | 1568150 | 1568410 | - | NZ_CP026364.1 | Proteus hauseri |
| 20 | 4776778 | 4777023 | - | NZ_LR134201.1 | Cedecea lapagei |
| 21 | 5176860 | 5177105 | - | NZ_CP023525.1 | Cedecea neteri |
| 22 | 3858315 | 3858572 | - | NZ_CP065534.1 | Lonsdalea populi |
| 23 | 4028387 | 4028644 | - | NZ_CP034148.1 | Pantoea agglomerans |
| 24 | 4034663 | 4034920 | - | NZ_CP045720.1 | Pantoea eucalypti |
| 25 | 4048841 | 4049098 | - | NZ_CP038853.1 | Pantoea vagans |
| 26 | 81340 | 81555 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 27 | 3388377 | 3388634 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 28 | 4144754 | 4145011 | - | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 29 | 4305740 | 4305997 | - | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 30 | 48408 | 48665 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 31 | 4002978 | 4003235 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 32 | 50046 | 50303 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 33 | 4569798 | 4570055 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 34 | 4265068 | 4265325 | - | NZ_CP061511.1 | Mixta calida |
| 35 | 41784 | 42041 | - | NZ_CP026377.1 | Mixta gaviniae |
| 36 | 4026649 | 4026906 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 37 | 3213558 | 3213803 | + | NZ_CP045300.1 | Kosakonia arachidis |
| 38 | 5414819 | 5415064 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 39 | 5315256 | 5315501 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 40 | 4890197 | 4890454 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 41 | 4286343 | 4286600 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 42 | 1601977 | 1602234 | + | NZ_CP019706.1 | Pantoea alhagi |
| 43 | 3444353 | 3444613 | - | NC_010554.1 | Proteus mirabilis HI4320 |
| 44 | 3786307 | 3786567 | - | NZ_CP031123.2 | Providencia huaxiensis |
| 45 | 4564821 | 4565078 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 46 | 4685495 | 4685752 | - | NZ_CP050150.1 | Hafnia alvei |
| 47 | 3742796 | 3743053 | + | NZ_LN907827.1 | Erwinia gerundensis |
| 48 | 5067185 | 5067442 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 49 | 3943373 | 3943633 | - | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 50 | 1142062 | 1142319 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 51 | 4617056 | 4617313 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 52 | 5189132 | 5189377 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 53 | 4279371 | 4279631 | - | NZ_CP048796.1 | Providencia vermicola |
| 54 | 1226279 | 1226524 | - | NZ_CP040428.1 | Jejubacter calystegiae |
| 55 | 5241329 | 5241574 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 56 | 5300722 | 5300967 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 57 | 5540913 | 5541158 | - | NZ_CP054254.1 | Klebsiella variicola |
| 58 | 5687792 | 5688052 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 59 | 4315739 | 4315996 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 60 | 4738908 | 4739165 | - | NZ_CP025799.1 | Dickeya zeae |
| 61 | 4812474 | 4812731 | - | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 62 | 4684307 | 4684552 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 63 | 48532 | 48789 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 64 | 6182251 | 6182508 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 65 | 4157224 | 4157481 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 66 | 4691231 | 4691488 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 67 | 3648463 | 3648720 | - | NZ_CP067057.1 | Rahnella aceris |
| 68 | 895653 | 895904 | - | NZ_CP020388.1 | Pluralibacter gergoviae |
| 69 | 4071787 | 4072044 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 70 | 4448647 | 4448904 | - | NZ_LR134340.1 | Escherichia marmotae |
| 71 | 2449458 | 2449715 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 72 | 1855579 | 1855836 | + | NZ_CP053416.1 | Salmonella bongori |
| 73 | 2888876 | 2889133 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 74 | 4634514 | 4634771 | - | NZ_AP022508.1 | Enterobacter bugandensis |
| 75 | 3884816 | 3885073 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 76 | 3859414 | 3859671 | + | NZ_AP014857.1 | Escherichia albertii |
| 77 | 4709704 | 4709961 | - | NZ_CP027986.1 | Enterobacter sichuanensis |
| 78 | 48967 | 49224 | + | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 79 | 4747406 | 4747663 | - | NZ_CP017184.1 | Enterobacter roggenkampii |
| 80 | 4811953 | 4812210 | - | NC_015968.1 | Enterobacter soli |
| 81 | 2582500 | 2582757 | + | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 82 | 4847429 | 4847686 | - | NZ_CP009756.1 | Enterobacter cloacae |
| 83 | 3233296 | 3233541 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 84 | 4046178 | 4046435 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 85 | 3565571 | 3565816 | + | NZ_CP045769.1 | Enterobacter cancerogenus |
| 86 | 1367090 | 1367335 | + | NZ_LT556085.1 | Citrobacter amalonaticus |
| 87 | 5110091 | 5110348 | - | NZ_CP043318.1 | Enterobacter chengduensis |
| 88 | 4261530 | 4261775 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 89 | 456657 | 456914 | + | NZ_CP045205.1 | Citrobacter telavivensis |
| 90 | 4671174 | 4671431 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 91 | 1732750 | 1732995 | - | NZ_CP042941.1 | Atlantibacter hermannii |
| 92 | 3121200 | 3121445 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 93 | 4879167 | 4879412 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 94 | 5597097 | 5597342 | - | NZ_CP050508.1 | Raoultella terrigena |
| 95 | 4771184 | 4771441 | + | NZ_CP013990.1 | Leclercia adecarboxylata |
| 96 | 1722754 | 1722999 | + | NZ_CP026047.1 | Raoultella planticola |
| 97 | 5574299 | 5574544 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 98 | 3974675 | 3974884 | - | NZ_LS483470.1 | Leminorella richardii |
| 99 | 3771889 | 3772146 | - | NZ_CP028271.1 | Mixta intestinalis |
| 100 | 3852968 | 3853210 | + | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 101 | 3486254 | 3486511 | - | NZ_CP023529.1 | Lelliottia amnigena |
| 102 | 3775205 | 3775447 | + | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 103 | 2158907 | 2159164 | - | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 104 | 1767472 | 1767726 | - | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 105 | 5265069 | 5265314 | - | NZ_CP041247.1 | Raoultella electrica |
| 106 | 4853100 | 4853357 | + | NC_014500.1 | Dickeya dadantii 3937 |
| 107 | 2782059 | 2782316 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 108 | 3423167 | 3423424 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 109 | 3810903 | 3811157 | - | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 110 | 1740556 | 1740810 | - | NZ_CP023706.1 | Edwardsiella tarda |
| 111 | 3810120 | 3810374 | - | NZ_CP016043.1 | Edwardsiella hoshinae |
| 112 | 3840203 | 3840463 | - | NZ_CP029185.2 | Limnobaculum parvum |
| 113 | 4606018 | 4606263 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 114 | 4907548 | 4907805 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 115 | 2285533 | 2285790 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 116 | 476539 | 476784 | - | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 117 | 2180348 | 2180608 | - | NZ_LT906463.1 | Haemophilus pittmaniae |
| 118 | 4752805 | 4753062 | - | NZ_CP046293.1 | Yersinia intermedia |
| 119 | 4608746 | 4609003 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 120 | 1588440 | 1588697 | + | NZ_CP007230.1 | Yersinia similis |
| 121 | 911389 | 911646 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 122 | 2844527 | 2844784 | + | NZ_CP009787.1 | Yersinia rohdei |
| 123 | 2720223 | 2720480 | - | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 124 | 1278600 | 1278857 | - | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 125 | 1914884 | 1915132 | + | NZ_CP020465.1 | Cognaticolwellia beringensis |
| 126 | 870651 | 870863 | + | NZ_CP015108.1 | Sporosarcina ureae |
| 127 | 4194540 | 4194737 | - | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 128 | 1870308 | 1870544 | + | NC_016630.1 | Filifactor alocis ATCC 35896 |
| 129 | 3658166 | 3658363 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 130 | 5278066 | 5278275 | - | NC_011830.1 | Desulfitobacterium hafniense DCB-2 |
| 131 | 2244913 | 2245134 | - | NZ_CP007452.1 | Peptoclostridium acidaminophilum DSM 3953 |
| 132 | 4224192 | 4224374 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 133 | 3463636 | 3463845 | - | NZ_CP042433.1 | Flavisolibacter ginsenosidimutans |
| 134 | 4127 | 4321 | - | NZ_AP018689.1 | Vibrio aphrogenes |
| 135 | 5063433 | 5063630 | - | NC_012962.1 | Photorhabdus asymbiotica |
| 136 | 3905 | 4087 | - | NC_011312.1 | Aliivibrio salmonicida LFI1238 |
| 137 | 4164 | 4346 | - | NZ_AP018685.1 | Vibrio rumoiensis |
| 138 | 3299588 | 3299782 | - | NZ_CP016176.1 | Xenorhabdus hominickii |
| 139 | 243018 | 243260 | - | NZ_CP068345.1 | Succinivibrio dextrinosolvens |
| 140 | 2684753 | 2684962 | - | NZ_AP019845.1 | Leptotrichia trevisanii |
| 141 | 4170837 | 4171064 | - | NZ_CP012621.1 | Zobellella denitrificans |
| 142 | 3210248 | 3210475 | + | NZ_CP044060.1 | Aeromonas veronii |
| 143 | 3475004 | 3475231 | + | NZ_CP065745.1 | Aeromonas allosaccharophila |
| 144 | 4754800 | 4755027 | - | NZ_AP022188.1 | Aeromonas media |
| 145 | 2304288 | 2304500 | - | NZ_AP019829.2 | Leptotrichia wadei |
| 146 | 1890260 | 1890457 | - | NZ_CP011104.1 | Photorhabdus thracensis |
| 147 | 3779453 | 3779683 | + | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 148 | 3167122 | 3167349 | + | NZ_LS483476.1 | Lederbergia lentus |
| 149 | 4633538 | 4633750 | + | NZ_CP024035.1 | Priestia aryabhattai |
| 150 | 3698485 | 3698712 | + | NZ_CP040449.1 | Aeromonas simiae |
| 151 | 1804545 | 1804784 | + | NZ_CP030926.1 | Peribacillus butanolivorans |
| 152 | 3177067 | 3177288 | - | NZ_CP017704.1 | Peribacillus simplex NBRC 15720 = DSM 1321 |
| 153 | 3213781 | 3214032 | - | NZ_CP029347.1 | Saliniradius amylolyticus |
| 154 | 2146805 | 2147029 | - | NC_017668.1 | Halobacillus halophilus DSM 2266 |
| 155 | 2932283 | 2932510 | + | NZ_CP051464.1 | Bacillus mojavensis |
| 156 | 3155968 | 3156195 | - | NZ_CP029364.1 | Bacillus halotolerans |
| 157 | 3157526 | 3157753 | + | NC_011729.1 | Gloeothece citriformis PCC 7424 |
| 158 | 2961776 | 2961991 | + | NZ_CP053376.1 | Bacillus amyloliquefaciens |
| 159 | 2141726 | 2141914 | - | NZ_AP019827.1 | Leptotrichia shahii |
| 160 | 2941799 | 2942026 | + | NZ_CP034943.1 | Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499 |
| 161 | 4278334 | 4278588 | - | NC_014541.1 | Ferrimonas balearica DSM 9799 |
| 162 | 9581 | 9835 | - | NC_008700.1 | Shewanella amazonensis SB2B |
| 163 | 4544539 | 4544745 | - | NC_013216.1 | Desulfofarcimen acetoxidans DSM 771 |
| 164 | 4221000 | 4221242 | - | NZ_CP037951.1 | Parashewanella tropica |
| 165 | 876224 | 876433 | - | NZ_CP016020.1 | Bacillus weihaiensis |
| 166 | 4787867 | 4788103 | + | NZ_CP032365.1 | Bacillus wiedmannii |
| 167 | 1023954 | 1024184 | - | NZ_CP011937.1 | Bacillus velezensis |
| 168 | 549108 | 549290 | + | NZ_CP026363.1 | Brevibacillus agri |
| 169 | 4603849 | 4604085 | + | NZ_CP064875.1 | Bacillus toyonensis |
| 170 | 3138097 | 3138324 | + | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
| 171 | 1166006 | 1166230 | - | NZ_CP027226.1 | Fastidiosipila sanguinis |
| 172 | 2943395 | 2943622 | + | NZ_CP048852.1 | Bacillus tequilensis |
| 173 | 2337722 | 2337946 | + | NZ_CP012152.1 | Anoxybacillus gonensis |
| 174 | 2948198 | 2948395 | + | NC_002570.2 | Alkalihalobacillus halodurans C-125 |
| 175 | 140601 | 140789 | + | NZ_CP036523.1 | Peptacetobacter hiranonis |
| 176 | 3520000 | 3520188 | - | NZ_CP068053.1 | Peribacillus psychrosaccharolyticus |
| 177 | 223211 | 223432 | + | NZ_CP068114.1 | Fusobacterium canifelinum |
| 178 | 849292 | 849516 | - | NZ_CP013862.1 | Lentibacillus amyloliquefaciens |
| 179 | 3017433 | 3017660 | + | NZ_CP013984.1 | Bacillus inaquosorum |
| 180 | 1454341 | 1454529 | - | NZ_AP018933.1 | Zymobacter palmae |
| 181 | 1875765 | 1876001 | - | NZ_CP029797.1 | Paraliobacillus zengyii |
| 182 | 2239161 | 2239394 | + | NZ_CP027770.1 | Staphylococcus felis |
| 183 | 1167217 | 1167441 | - | NC_007759.1 | Syntrophus aciditrophicus SB |
| 184 | 450114 | 450314 | + | NZ_AP019004.1 | Phascolarctobacterium faecium |
| 185 | 3602946 | 3603161 | - | NZ_CP025197.1 | Acetivibrio saccincola |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_012880.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF12631.9 | 0.85 | 157 | 1752.0 | same-strand | MnmE helical domain |
| 2 | PF10396.11 | 0.85 | 157 | 1752.0 | same-strand | GTP-binding protein TrmE N-terminus |
| 3 | PF14849.8 | 0.78 | 144 | 3 | same-strand | YidC periplasmic domain |
| 4 | PF02096.22 | 0.85 | 157 | 3.0 | same-strand | 60Kd inner membrane protein |
| 5 | PF00825.20 | 0.7 | 128 | -36 | same-strand | Ribonuclease P |
++ More..