ProsmORF-pred
Result : Q7V4G6
Protein Information
Information Type Description
Protein name UPF0367 protein PMT_1986
NCBI Accession ID BX548175.1
Organism Prochlorococcus marinus (strain MIT 9313)
Left 2100119
Right 2100421
Strand +
Nucleotide Sequence GTGATTCGCAAGAATGATGCAATCCTGTCAACGTTGTCCGTGTACGTCATTGAGCTGGCCCTCAAATTGAGCCCCTTGCCGGTATCGGTGCAGCGAAAAGCATTAACAGATGCGGAAGCCGTTTACCAGCAAGTGCGCAAGTGCCTGGAGAGAGGTCAGCCTCACCTTCTCGAGCTCAGTTGCGAAAAAGTCGAAGACAAGAAAGTCACTGTTTTGGTCAGTGAAATAGTTGCTGTTCAGCTCTATGAGAAAACAGCAGCAACTGGAGGCAGTAAGCGGCCTGGCTTTTCCTTTGAAACCTGA
Sequence MIRKNDAILSTLSVYVIELALKLSPLPVSVQRKALTDAEAVYQQVRKCLERGQPHLLELSCEKVEDKKVTVLVSEIVAVQLYEKTAATGGSKRPGFSFET
Source of smORF Swiss-Prot
Function The ORF matches to the profile of PRK13683. Profile Description: hypothetical protein; Provisional
Pubmed ID 12917642
Domain CDD:184240
Functional Category Others
Uniprot ID Q7V4G6
ORF Length (Amino Acid) 100
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Conservation Analysis
Conservation Analysis
No. of Species: 4
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 145956 146219 + NC_005042.1 Prochlorococcus marinus subsp. marinus str. CCMP1375
2 2853160 2853423 - NC_019675.1 Cyanobium gracile PCC 6307
3 2048351 2048614 - NC_019753.1 Crinalium epipsammum PCC 9333
4 1699826 1700080 - NZ_CP021983.2 Halomicronema hongdechloris C2206
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NC_019675.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF00005.29 1.0 4 1.5 same-strand ABC transporter
2 PF00124.21 0.75 3 293 opposite-strand Photosynthetic reaction centre protein
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