Result : Q7NH99
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 30S ribosomal protein S16 |
| NCBI Accession ID | BA000045.2 |
| Organism | Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) |
| Left | 2794706 |
| Right | 2794975 |
| Strand | - |
| Nucleotide Sequence | TTGAAGCGCATTGGCGCCAAGAAAAAGCCGGTCTACCGCATCGTGGTGACCGACTCGCGCTCCCGCCGCGACGGTGCGGTCATCGAGGAAATCGGCTTTTACGATCCTCGCGCCAACACCGAGAAGGGCCTGCCCGAGGTCACCCTCGACGTCGAAGCCGCCCGCAGGTGGCTCTCCCACGGCGCCCGGCCGTCCGAAACGGTCCAGGGCCTGCTGAAGCGCGCCCAGGTCTACGCATCCCCGTCCTCTTCTACGCCCGACAGTGATTAG |
| Sequence | MKRIGAKKKPVYRIVVTDSRSRRDGAVIEEIGFYDPRANTEKGLPEVTLDVEAARRWLSHGARPSETVQGLLKRAQVYASPSSSTPDSD |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl00368. Profile Description: Ribosomal protein S16. This model describes ribosomal S16 of bacteria and organelles. [Protein synthesis, Ribosomal proteins: synthesis and modification] |
| Pubmed ID | 14621292 |
| Domain | CDD:412339 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | Q7NH99 |
| ORF Length (Amino Acid) | 89 |
++ More..
| Conservation Analysis |
No. of Species: 265
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 2794706 | 2794975 | - | NC_005125.1 | Gloeobacter violaceus PCC 7421 |
| 2 | 811505 | 811768 | + | NC_022600.1 | Gloeobacter kilaueensis JS1 |
| 3 | 1879313 | 1879555 | - | NZ_CP025197.1 | Acetivibrio saccincola |
| 4 | 1303560 | 1303820 | - | NC_014209.1 | Thermoanaerobacter mathranii subsp. mathranii str. A3 |
| 5 | 1307740 | 1308000 | - | NC_014964.1 | Thermoanaerobacter brockii subsp. finnii Ako-1 |
| 6 | 1281762 | 1282022 | - | NC_013921.1 | Thermoanaerobacter italicus Ab9 |
| 7 | 1419265 | 1419525 | - | NC_015958.1 | Thermoanaerobacter wiegelii Rt8.B1 |
| 8 | 1653022 | 1653240 | - | NC_014392.1 | Caldicellulosiruptor obsidiansis OB47 |
| 9 | 1449802 | 1450020 | - | NC_015949.1 | Caldicellulosiruptor lactoaceticus 6A |
| 10 | 1786397 | 1786615 | - | NC_014652.1 | Caldicellulosiruptor hydrothermalis 108 |
| 11 | 1022865 | 1023083 | + | NC_014721.1 | Caldicellulosiruptor kristjanssonii I77R1B |
| 12 | 1073017 | 1073235 | + | NC_012034.1 | Caldicellulosiruptor bescii DSM 6725 |
| 13 | 1433601 | 1433849 | - | NC_003869.1 | Caldanaerobacter subterraneus subsp. tengcongensis MB4 |
| 14 | 861005 | 861223 | + | NC_014657.1 | Caldicellulosiruptor owensensis OL |
| 15 | 1872404 | 1872622 | - | NC_014720.1 | Caldicellulosiruptor kronotskyensis 2002 |
| 16 | 2293333 | 2293551 | - | NC_009437.1 | Caldicellulosiruptor saccharolyticus DSM 8903 |
| 17 | 2140720 | 2140950 | - | NZ_CP014223.1 | Anaerotignum propionicum DSM 1682 |
| 18 | 1416853 | 1417095 | - | NC_013385.1 | Ammonifex degensii KC4 |
| 19 | 1120970 | 1121188 | + | NZ_CP034791.1 | Caldicellulosiruptor changbaiensis |
| 20 | 1309769 | 1310029 | - | NZ_CP009170.1 | Thermoanaerobacter kivui |
| 21 | 911718 | 911963 | + | NZ_CP017237.1 | Moorella thermoacetica |
| 22 | 1406070 | 1406300 | - | NC_015555.1 | Thermoanaerobacterium xylanolyticum LX-11 |
| 23 | 1482970 | 1483200 | - | NZ_CP047602.1 | Thermoanaerobacterium aotearoense |
| 24 | 1438092 | 1438325 | + | NZ_CP022121.1 | Dehalobacterium formicoaceticum |
| 25 | 3239323 | 3239541 | - | NZ_AP023367.1 | Anaerocolumna cellulosilytica |
| 26 | 854220 | 854474 | + | NC_019386.1 | Thermus oshimai JL-2 |
| 27 | 722462 | 722716 | - | NZ_CP038452.1 | Thermus caldilimi |
| 28 | 3753667 | 3753885 | + | NZ_CP048000.1 | Anaerocolumna sedimenticola |
| 29 | 1951200 | 1951439 | + | NZ_CP045875.1 | Heliorestis convoluta |
| 30 | 2526675 | 2526917 | - | NC_015275.1 | Cellulosilyticum lentocellum DSM 5427 |
| 31 | 1472664 | 1472894 | - | NC_014410.1 | Thermoanaerobacterium thermosaccharolyticum DSM 571 |
| 32 | 1221728 | 1221946 | - | NZ_CP027228.1 | Mogibacterium diversum |
| 33 | 580285 | 580530 | + | NC_013895.2 | Mageeibacillus indolicus UPII9-5 |
| 34 | 3061194 | 3061439 | - | NZ_CP045571.1 | Acidithiobacillus thiooxidans ATCC 19377 |
| 35 | 257890 | 258144 | - | NZ_CP016312.1 | Thermus brockianus |
| 36 | 946301 | 946546 | + | NC_014220.1 | Syntrophothermus lipocalidus DSM 12680 |
| 37 | 851024 | 851266 | + | NZ_CP030777.1 | Faecalibacterium prausnitzii |
| 38 | 1000618 | 1000881 | - | NZ_CP010822.1 | Thermus aquaticus Y51MC23 |
| 39 | 1857095 | 1857313 | - | NC_010556.1 | Exiguobacterium sibiricum 255-15 |
| 40 | 1208218 | 1208460 | + | NZ_LN879430.1 | Herbinix luporum |
| 41 | 3995179 | 3995418 | - | NC_011830.1 | Desulfitobacterium hafniense DCB-2 |
| 42 | 1659230 | 1659475 | + | NZ_CP015378.1 | Fictibacillus phosphorivorans |
| 43 | 788268 | 788513 | - | NZ_AP018795.1 | Acidithiobacillus ferridurans |
| 44 | 1145506 | 1145751 | + | NZ_CP046996.1 | Dehalobacter restrictus |
| 45 | 305370 | 305615 | + | NC_015942.1 | Acidithiobacillus ferrivorans SS3 |
| 46 | 2539999 | 2540244 | - | NC_011761.1 | Acidithiobacillus ferrooxidans ATCC 23270 |
| 47 | 1325418 | 1325636 | + | NZ_CP040058.1 | Anaerostipes rhamnosivorans |
| 48 | 2232953 | 2233171 | - | NZ_CP036345.1 | Anaerostipes caccae L1-92 |
| 49 | 1713084 | 1713302 | + | NZ_CP016502.1 | Acetivibrio thermocellus DSM 2360 |
| 50 | 2586248 | 2586493 | - | NZ_CP024109.1 | Bacillus cytotoxicus |
| 51 | 982747 | 983013 | - | NC_006461.1 | Thermus thermophilus HB8 |
| 52 | 1616085 | 1616309 | - | NZ_AP022873.1 | Dissulfurispira thermophila |
| 53 | 1425270 | 1425515 | + | NZ_CP019699.1 | Novibacillus thermophilus |
| 54 | 302035 | 302286 | - | NZ_CP017269.1 | Geosporobacter ferrireducens |
| 55 | 3239160 | 3239399 | - | NC_018017.1 | Desulfitobacterium dehalogenans ATCC 51507 |
| 56 | 1444268 | 1444522 | - | NZ_CP011361.2 | Salimicrobium jeotgali |
| 57 | 2343322 | 2343561 | - | NC_015172.1 | Syntrophobotulus glycolicus DSM 8271 |
| 58 | 1156213 | 1156470 | + | NZ_CP011366.1 | Salinicoccus halodurans |
| 59 | 1945422 | 1945667 | + | NZ_CP021850.1 | Pseudoclostridium thermosuccinogenes |
| 60 | 2595308 | 2595553 | - | NZ_CP019659.1 | Paenibacillus larvae subsp. larvae |
| 61 | 1439280 | 1439525 | - | NZ_CP014332.1 | Weissella jogaejeotgali |
| 62 | 1162676 | 1162906 | - | NZ_CP045798.1 | Thermoanaerosceptrum fracticalcis |
| 63 | 2763568 | 2763813 | - | NZ_CP018058.1 | Geobacillus thermocatenulatus |
| 64 | 2310185 | 2310436 | - | NC_014212.1 | Meiothermus silvanus DSM 9946 |
| 65 | 1604715 | 1604963 | - | NZ_CP040676.1 | Exiguobacterium mexicanum |
| 66 | 1011486 | 1011761 | + | NC_014925.1 | Staphylococcus pseudintermedius HKU10-03 |
| 67 | 1802554 | 1802799 | + | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 68 | 5464991 | 5465236 | + | NZ_CP016809.1 | Paenibacillus ihbetae |
| 69 | 1219096 | 1219341 | + | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 70 | 304954 | 305199 | + | NZ_CP061470.1 | Geobacillus zalihae |
| 71 | 666948 | 667193 | + | NZ_CP061472.1 | Geobacillus thermoleovorans |
| 72 | 1501319 | 1501564 | + | NZ_CP040336.1 | Bacillus luti |
| 73 | 3658378 | 3658623 | - | NC_007530.2 | Bacillus anthracis str. 'Ames Ancestor' |
| 74 | 3727923 | 3728168 | - | NZ_CP064875.1 | Bacillus toyonensis |
| 75 | 3862973 | 3863218 | - | NC_011725.1 | Bacillus cereus B4264 |
| 76 | 3867215 | 3867460 | - | NZ_CP032365.1 | Bacillus wiedmannii |
| 77 | 1005058 | 1005324 | + | NZ_CP014141.1 | Thermus parvatiensis |
| 78 | 2789376 | 2789621 | - | NZ_CP070511.1 | Parageobacillus toebii |
| 79 | 1854272 | 1854514 | - | NZ_CP026328.2 | Acidithiobacillus caldus |
| 80 | 1090747 | 1090965 | + | NC_015520.1 | Mahella australiensis 50-1 BON |
| 81 | 2184520 | 2184759 | + | NC_010337.2 | Heliomicrobium modesticaldum Ice1 |
| 82 | 1706881 | 1707099 | - | NC_014614.1 | Acetoanaerobium sticklandii |
| 83 | 3301025 | 3301279 | + | NZ_CP034437.1 | Paenibacillus albus |
| 84 | 2765183 | 2765437 | + | NZ_CP048209.1 | Paenibacillus lycopersici |
| 85 | 1342225 | 1342473 | + | NZ_CP040586.1 | Furfurilactobacillus rossiae |
| 86 | 897396 | 897650 | - | NZ_CP048286.1 | Paenibacillus rhizovicinus |
| 87 | 1328351 | 1328569 | - | NZ_LT635479.1 | Lachnoclostridium phocaeense |
| 88 | 2603503 | 2603775 | + | NZ_CP013023.1 | Paenibacillus bovis |
| 89 | 2268505 | 2268735 | - | NC_014376.1 | [Clostridium] saccharolyticum WM1 |
| 90 | 2905812 | 2906054 | - | NZ_CP015756.1 | Clostridium estertheticum subsp. estertheticum |
| 91 | 370829 | 371077 | + | NZ_CP013862.1 | Lentibacillus amyloliquefaciens |
| 92 | 388229 | 388483 | + | NZ_CP023501.1 | Weissella paramesenteroides |
| 93 | 1056862 | 1057107 | + | NZ_CP033433.1 | Cohnella candidum |
| 94 | 793804 | 794049 | - | NZ_CP035807.1 | Thiospirochaeta perfilievii |
| 95 | 1280337 | 1280555 | - | NZ_CP027002.1 | [Ruminococcus] gnavus ATCC 29149 |
| 96 | 2890617 | 2890862 | - | NZ_CP014150.1 | Paeniclostridium sordellii |
| 97 | 1070109 | 1070342 | + | NC_017857.3 | Methylophaga nitratireducenticrescens |
| 98 | 1988019 | 1988273 | - | NZ_CP012502.1 | Bacillus beveridgei |
| 99 | 58508 | 58741 | + | NZ_LR130778.1 | Petrocella atlantisensis |
| 100 | 4323021 | 4323275 | - | NZ_AP019400.1 | Cohnella abietis |
| 101 | 2012141 | 2012386 | + | NC_017668.1 | Halobacillus halophilus DSM 2266 |
| 102 | 1790523 | 1790786 | - | NZ_CP024955.1 | Kyrpidia spormannii |
| 103 | 1221760 | 1222017 | - | NZ_CP044499.1 | Lapidilactobacillus dextrinicus |
| 104 | 1078815 | 1079060 | + | NZ_AP019309.1 | Intestinibaculum porci |
| 105 | 4068091 | 4068345 | - | NZ_CP034346.1 | Paenibacillus lutimineralis |
| 106 | 749754 | 750008 | + | NZ_CP059276.1 | Lactobacillus taiwanensis |
| 107 | 769003 | 769257 | + | NC_008530.1 | Lactobacillus gasseri ATCC 33323 = JCM 1131 |
| 108 | 762784 | 763038 | + | NZ_AP018549.1 | Lactobacillus paragasseri |
| 109 | 1467335 | 1467598 | + | NC_014098.1 | Kyrpidia tusciae DSM 2912 |
| 110 | 3988884 | 3989138 | - | NZ_CP034248.1 | Paenibacillus lentus |
| 111 | 325382 | 325636 | + | NC_019793.1 | Deinococcus peraridilitoris DSM 19664 |
| 112 | 1431567 | 1431821 | + | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 113 | 1068930 | 1069175 | + | NZ_CP045293.1 | Paenibacillus guangzhouensis |
| 114 | 34052 | 34297 | - | NZ_CP053988.1 | Abiotrophia defectiva |
| 115 | 2221058 | 2221297 | - | NZ_CP048436.1 | Flavonifractor plautii |
| 116 | 799253 | 799498 | + | NZ_CP035492.1 | Paenibacillus protaetiae |
| 117 | 1415295 | 1415540 | - | NZ_CP023434.1 | Suicoccus acidiformans |
| 118 | 1137960 | 1138214 | - | NZ_CP024610.1 | Lactobacillus terrae |
| 119 | 4576542 | 4576814 | + | NZ_CP011058.1 | Paenibacillus beijingensis |
| 120 | 270274 | 270492 | + | NZ_CP070062.1 | Coprococcus comes |
| 121 | 2431562 | 2431780 | + | NZ_CP039126.1 | Blautia producta |
| 122 | 1584247 | 1584483 | + | NZ_CP021781.1 | Francisella adeliensis |
| 123 | 2496563 | 2496781 | - | NC_016894.1 | Acetobacterium woodii DSM 1030 |
| 124 | 1851922 | 1852155 | + | NC_023035.1 | Salinispira pacifica |
| 125 | 1825607 | 1825879 | - | NC_013891.1 | Listeria seeligeri serovar 1/2b str. SLCC3954 |
| 126 | 1841454 | 1841726 | - | NZ_LT906444.1 | Listeria welshimeri |
| 127 | 1922044 | 1922316 | - | NZ_CP009577.1 | Listeria ivanovii subsp. ivanovii |
| 128 | 1867427 | 1867699 | - | NC_003210.1 | Listeria monocytogenes EGD-e |
| 129 | 2151016 | 2151261 | - | NZ_CP014342.1 | Geobacillus subterraneus |
| 130 | 3397907 | 3398152 | - | NZ_CP017703.1 | Aeribacillus pallidus |
| 131 | 2210033 | 2210278 | - | NC_019897.1 | Thermobacillus composti KWC4 |
| 132 | 652778 | 653032 | - | NZ_CP012034.1 | Companilactobacillus ginsenosidimutans |
| 133 | 2250415 | 2250663 | + | NZ_CP042326.1 | Euhalothece natronophila Z-M001 |
| 134 | 2456849 | 2457103 | - | NZ_AP019308.1 | Paenibacillus baekrokdamisoli |
| 135 | 1887996 | 1888214 | - | NZ_HG917868.1 | Clostridium bornimense |
| 136 | 3786287 | 3786532 | - | NZ_CP009288.1 | Paenibacillus durus |
| 137 | 1918971 | 1919189 | + | NZ_CP036259.1 | Sporomusa termitida |
| 138 | 854699 | 854947 | + | NZ_CP047141.1 | Ligilactobacillus animalis |
| 139 | 1691720 | 1691965 | + | NZ_CP029797.1 | Paraliobacillus zengyii |
| 140 | 1039972 | 1040217 | + | NZ_CP012152.1 | Anoxybacillus gonensis |
| 141 | 1743704 | 1743952 | - | NZ_CP047121.1 | Lentilactobacillus hilgardii |
| 142 | 1779009 | 1779254 | + | NC_006270.3 | Bacillus licheniformis DSM 13 = ATCC 14580 |
| 143 | 1905146 | 1905367 | + | NC_015687.1 | Clostridium acetobutylicum DSM 1731 |
| 144 | 1755072 | 1755326 | + | NZ_CP019323.1 | Companilactobacillus allii |
| 145 | 667863 | 668111 | + | NZ_CP011403.1 | Ligilactobacillus salivarius str. Ren |
| 146 | 765146 | 765400 | + | NZ_CP018809.1 | Lactobacillus jensenii |
| 147 | 3268535 | 3268780 | - | NZ_CP004078.1 | Paenibacillus sabinae T27 |
| 148 | 1421220 | 1421465 | + | NZ_AP021853.1 | Sporolactobacillus terrae |
| 149 | 840701 | 840937 | - | NC_017856.1 | Methylophaga frappieri |
| 150 | 1005231 | 1005497 | + | NC_008340.1 | Alkalilimnicola ehrlichii MLHE-1 |
| 151 | 2671239 | 2671511 | - | NZ_LS483476.1 | Lederbergia lentus |
| 152 | 1801619 | 1801864 | + | NZ_CP023665.1 | Bacillus paralicheniformis |
| 153 | 1800980 | 1801225 | + | NZ_LT603683.1 | Bacillus glycinifermentans |
| 154 | 1062206 | 1062451 | - | NC_012778.1 | [Eubacterium] eligens ATCC 27750 |
| 155 | 3449100 | 3449345 | - | NZ_CP009286.1 | Paenibacillus stellifer |
| 156 | 1200289 | 1200507 | + | NZ_CP017253.2 | Clostridium taeniosporum |
| 157 | 1954699 | 1954944 | - | NZ_CP048104.1 | Kroppenstedtia pulmonis |
| 158 | 3908128 | 3908391 | - | NZ_CP012373.2 | Beggiatoa leptomitoformis |
| 159 | 3258745 | 3258975 | - | NZ_CP022464.2 | Enterocloster bolteae |
| 160 | 884508 | 884753 | - | NZ_AP019711.1 | Amedibacterium intestinale |
| 161 | 4652719 | 4652964 | + | NZ_CP041217.1 | Saccharibacillus brassicae |
| 162 | 956778 | 957032 | - | NZ_CP029476.1 | Lactobacillus apis |
| 163 | 774850 | 775092 | - | NZ_HF545616.1 | Ruminococcus bicirculans |
| 164 | 2700641 | 2700886 | - | NZ_CP019870.1 | Clostridioides difficile |
| 165 | 1102829 | 1103077 | + | NZ_LS483405.1 | Levilactobacillus brevis |
| 166 | 1573868 | 1574086 | + | NC_022571.1 | Clostridium saccharobutylicum DSM 13864 |
| 167 | 3730842 | 3731093 | - | NC_015577.1 | Treponema azotonutricium ZAS-9 |
| 168 | 1852009 | 1852254 | + | NZ_CP033052.1 | Bacillus vallismortis |
| 169 | 1677767 | 1678012 | + | NZ_CP051464.1 | Bacillus mojavensis |
| 170 | 1641447 | 1641692 | + | NZ_CP034943.1 | Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499 |
| 171 | 1646518 | 1646763 | + | NZ_CP013984.1 | Bacillus inaquosorum |
| 172 | 312234 | 312479 | - | NZ_CP029364.1 | Bacillus halotolerans |
| 173 | 1673647 | 1673892 | + | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
| 174 | 1270074 | 1270346 | - | NZ_CP046314.1 | Gemella morbillorum |
| 175 | 932232 | 932504 | + | NZ_LR134484.1 | Gemella haemolysans |
| 176 | 1554659 | 1554886 | + | NZ_CP041666.1 | Radiobacillus deserti |
| 177 | 1607271 | 1607495 | - | NZ_CP036523.1 | Peptacetobacter hiranonis |
| 178 | 299308 | 299541 | + | NZ_CP038241.1 | Allofrancisella inopinata |
| 179 | 1646403 | 1646648 | + | NC_013204.1 | Eggerthella lenta DSM 2243 |
| 180 | 617995 | 618240 | + | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 181 | 2254474 | 2254725 | + | NZ_CP031518.1 | Treponema ruminis |
| 182 | 1673975 | 1674208 | - | NC_023029.1 | Francisella orientalis LADL--07-285A |
| 183 | 1683334 | 1683567 | - | NC_017449.1 | Francisella hispaniensis |
| 184 | 14679 | 14912 | + | NZ_CP043552.1 | Francisella marina |
| 185 | 2211647 | 2211865 | - | NZ_CP013019.1 | Clostridium pasteurianum |
| 186 | 657445 | 657678 | + | NC_015696.1 | Francisella salina |
| 187 | 1577708 | 1577953 | + | NC_004193.1 | Oceanobacillus iheyensis HTE831 |
| 188 | 1195850 | 1196104 | - | NZ_CP029477.1 | Lactobacillus kullabergensis |
| 189 | 1607940 | 1608173 | + | NC_006177.1 | Symbiobacterium thermophilum IAM 14863 |
| 190 | 2372021 | 2372278 | - | NZ_CP016268.1 | Woeseia oceani |
| 191 | 2723118 | 2723363 | - | NC_014829.1 | Evansella cellulosilytica DSM 2522 |
| 192 | 1027724 | 1027978 | + | NZ_CP014167.1 | Paenibacillus yonginensis |
| 193 | 6150367 | 6150612 | + | NZ_CP045295.1 | Paenibacillus cellulositrophicus |
| 194 | 1442119 | 1442340 | + | NC_010718.1 | Natranaerobius thermophilus JW/NM-WN-LF |
| 195 | 1108392 | 1108646 | - | NZ_CP029544.1 | Lactobacillus helsingborgensis |
| 196 | 1218088 | 1218342 | + | NZ_CP039710.1 | Thermoactinomyces vulgaris |
| 197 | 1368177 | 1368410 | - | NZ_CP038017.1 | Allofrancisella frigidaquae |
| 198 | 2793123 | 2793341 | - | NZ_CP049887.1 | Vagococcus hydrophili |
| 199 | 2332271 | 2332516 | - | NZ_CP011937.1 | Bacillus velezensis |
| 200 | 1628630 | 1628875 | + | NZ_CP053376.1 | Bacillus amyloliquefaciens |
| 201 | 1609149 | 1609403 | - | NC_022369.1 | Lactococcus lactis subsp. cremoris KW2 |
| 202 | 1545691 | 1545936 | + | NZ_CP009416.1 | Jeotgalibacillus malaysiensis |
| 203 | 4956928 | 4957182 | - | NZ_CP009285.1 | Paenibacillus borealis |
| 204 | 563376 | 563609 | + | NZ_CP010427.1 | Allofrancisella guangzhouensis |
| 205 | 124028 | 124273 | - | NZ_CP017786.1 | Bacillus xiamenensis |
| 206 | 1575194 | 1575439 | + | NZ_CP011150.1 | Bacillus altitudinis |
| 207 | 3743746 | 3743991 | - | NZ_CP043404.1 | Bacillus safensis |
| 208 | 4177697 | 4177942 | - | NZ_CP009428.1 | Paenibacillus odorifer |
| 209 | 3737518 | 3737763 | - | NZ_CP021780.1 | Paenibacillus donghaensis |
| 210 | 4813118 | 4813372 | - | NZ_CP026520.1 | Paenibacillus chitinolyticus |
| 211 | 4236565 | 4236810 | - | NZ_CP009287.1 | Paenibacillus graminis |
| 212 | 6308927 | 6309172 | - | NZ_CP068595.1 | Paenibacillus sonchi |
| 213 | 4767622 | 4767867 | - | NZ_LN831776.1 | Paenibacillus riograndensis SBR5 |
| 214 | 1581329 | 1581574 | + | NZ_CP048852.1 | Bacillus tequilensis |
| 215 | 2355045 | 2355302 | - | NC_019940.1 | Thioflavicoccus mobilis 8321 |
| 216 | 3683369 | 3683608 | - | NZ_CP071376.1 | Clostridium gasigenes |
| 217 | 1575145 | 1575378 | - | NZ_CP022375.1 | Francisella opportunistica |
| 218 | 543884 | 544138 | + | NZ_CP031835.1 | Lactobacillus amylolyticus |
| 219 | 1794622 | 1794867 | + | NZ_CP024848.1 | Oceanobacillus zhaokaii |
| 220 | 1553898 | 1554146 | - | NC_014334.2 | Lacticaseibacillus paracasei |
| 221 | 1532051 | 1532299 | - | NZ_AP012544.1 | Lacticaseibacillus casei DSM 20011 = JCM 1134 = ATCC 393 |
| 222 | 1536516 | 1536764 | - | NZ_LS991421.1 | Lacticaseibacillus zeae |
| 223 | 4370337 | 4370582 | + | NZ_CP045298.1 | Paenibacillus brasilensis |
| 224 | 3491606 | 3491851 | - | NZ_CP020028.1 | Paenibacillus kribbensis |
| 225 | 3840179 | 3840424 | + | NC_016641.1 | Paenibacillus terrae HPL-003 |
| 226 | 2250791 | 2251033 | - | NC_009253.1 | Desulfotomaculum reducens MI-1 |
| 227 | 2171952 | 2172197 | + | NZ_CP053989.1 | Niallia circulans |
| 228 | 1445599 | 1445817 | + | NZ_CP060720.1 | Vagococcus carniphilus |
| 229 | 6169064 | 6169309 | - | NZ_CP048429.1 | Paenibacillus jilunlii |
| 230 | 2813820 | 2814092 | + | NZ_CP043611.1 | Paenibacillus antarcticus |
| 231 | 255824 | 256057 | - | NZ_CP022132.1 | Francisella halioticida |
| 232 | 1789139 | 1789384 | - | NZ_CP038012.1 | Sporosarcina pasteurii |
| 233 | 2540574 | 2540819 | - | NZ_CP017560.1 | Sporosarcina ureilytica |
| 234 | 1145135 | 1145392 | - | NC_008609.1 | Pelobacter propionicus DSM 2379 |
| 235 | 1767477 | 1767716 | - | NZ_CP054142.1 | Treponema parvum |
| 236 | 787401 | 787676 | - | NC_017080.1 | Phycisphaera mikurensis NBRC 102666 |
| 237 | 1965693 | 1965950 | - | NZ_CP042371.1 | Secundilactobacillus malefermentans |
| 238 | 1693559 | 1693807 | - | NZ_CP017713.1 | Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 |
| 239 | 3988732 | 3988977 | - | NZ_CP024035.1 | Priestia aryabhattai |
| 240 | 845576 | 845800 | + | NZ_AP018724.1 | Sulfurivermis fontis |
| 241 | 3277285 | 3277530 | - | NZ_CP014616.1 | Sporosarcina psychrophila |
| 242 | 544051 | 544299 | - | NC_016633.1 | Sphaerochaeta pleomorpha str. Grapes |
| 243 | 1576588 | 1576836 | + | NZ_CP023011.2 | Enterococcus hirae |
| 244 | 2262481 | 2262738 | + | NZ_CP011129.1 | Lysobacter antibioticus |
| 245 | 1050810 | 1051055 | + | NZ_CP006837.1 | Lysinibacillus varians |
| 246 | 3619485 | 3619730 | - | NZ_CP019980.1 | Lysinibacillus sphaericus |
| 247 | 2578893 | 2579138 | + | NC_014958.1 | Deinococcus maricopensis DSM 21211 |
| 248 | 2567570 | 2567815 | - | NZ_CP018866.1 | Sutcliffiella cohnii |
| 249 | 3743988 | 3744233 | - | NZ_CP010820.1 | Lysinibacillus fusiformis |
| 250 | 2606735 | 2606962 | - | NC_007484.1 | Nitrosococcus oceani ATCC 19707 |
| 251 | 959899 | 960144 | - | NZ_CP017704.1 | Peribacillus simplex NBRC 15720 = DSM 1321 |
| 252 | 4232745 | 4232990 | + | NZ_CP030926.1 | Peribacillus butanolivorans |
| 253 | 1052095 | 1052343 | + | NZ_CP049886.1 | Vagococcus coleopterorum |
| 254 | 1569646 | 1569894 | + | NC_008025.1 | Deinococcus geothermalis DSM 11300 |
| 255 | 1262692 | 1262937 | - | NZ_CP068053.1 | Peribacillus psychrosaccharolyticus |
| 256 | 1949917 | 1950162 | - | NZ_CP016539.2 | Planococcus plakortidis |
| 257 | 1972468 | 1972713 | - | NZ_CP016538.2 | Planococcus maritimus |
| 258 | 1995711 | 1995956 | - | NZ_CP059540.1 | Planococcus maritimus |
| 259 | 1768142 | 1768387 | - | NZ_CP013659.2 | Planococcus rifietoensis |
| 260 | 4169161 | 4169421 | + | NZ_CP022203.1 | Corallococcus macrosporus DSM 14697 |
| 261 | 4291725 | 4291985 | - | NZ_CP012109.1 | Myxococcus hansupus |
| 262 | 2441018 | 2441263 | - | NZ_AP014936.1 | Sulfurifustis variabilis |
| 263 | 6263072 | 6263338 | - | NC_010162.1 | Sorangium cellulosum So ce56 |
| 264 | 4130752 | 4131012 | + | NC_008095.1 | Myxococcus xanthus DK 1622 |
| 265 | 1561266 | 1561490 | - | NZ_CP035946.1 | Campylobacter canadensis |
| 266 | 2826514 | 2826768 | - | NZ_CP020046.1 | Thiomonas intermedia |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_014209.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF13083.8 | 0.82 | 218 | 21 | same-strand | KH domain |
| 2 | PF00448.24 | 0.86 | 228 | 135.0 | same-strand | SRP54-type protein, GTPase domain |
| 3 | PF02978.21 | 0.86 | 228 | 105 | same-strand | Signal peptide binding domain |
| 4 | PF02881.21 | 0.86 | 228 | 135.0 | same-strand | SRP54-type protein, helical bundle domain |
| 5 | PF01746.23 | 0.92 | 243 | 877.0 | same-strand | tRNA (Guanine-1)-methyltransferase |
| 6 | PF01782.20 | 0.95 | 252 | 362.5 | same-strand | RimM N-terminal domain |
| 7 | PF05239.18 | 0.89 | 236 | 364 | same-strand | PRC-barrel domain |
| 8 | PF04297.16 | 0.73 | 194 | 1487 | same-strand | Putative helix-turn-helix protein, YlxM / p13 like |
| 9 | PF01245.22 | 0.79 | 210 | 1754 | same-strand | Ribosomal protein L19 |
++ More..