Result : Q7NEG5
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 30S ribosomal protein S14 type Z |
| NCBI Accession ID | |
| Organism | Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) |
| Left | |
| Right | |
| Strand | |
| Nucleotide Sequence | |
| Sequence | MVEREKKRQKLVLKGKLSDTRLHNRCWRCGRPRGYIRDFGLCRICFREMAHQGLLPGVVKASW |
| Source of smORF | Swiss-Prot |
| Function | Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. {ECO:0000255|HAMAP-Rule:MF_01364}. |
| Pubmed ID | 14621292 |
| Domain | CDD:412331 |
| Functional Category | Metal-binding_and_Ribosomal_protein |
| Uniprot ID | Q7NEG5 |
| ORF Length (Amino Acid) | 63 |
++ More..
| Conservation Analysis |
No. of Species: 396
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 4113371 | 4113562 | - | NC_005125.1 | Gloeobacter violaceus PCC 7421 |
| 2 | 2778540 | 2778731 | - | NC_022600.1 | Gloeobacter kilaueensis JS1 |
| 3 | 359339 | 359503 | + | NC_015555.1 | Thermoanaerobacterium xylanolyticum LX-11 |
| 4 | 2251552 | 2251716 | - | NZ_CP047602.1 | Thermoanaerobacterium aotearoense |
| 5 | 435528 | 435692 | + | NC_014410.1 | Thermoanaerobacterium thermosaccharolyticum DSM 571 |
| 6 | 1066996 | 1067151 | + | NC_005043.1 | Chlamydia pneumoniae TW-183 |
| 7 | 958903 | 959058 | - | NC_003361.3 | Chlamydia caviae GPIC |
| 8 | 981466 | 981621 | + | NZ_LS398098.1 | Chlamydia suis |
| 9 | 2546742 | 2546912 | - | NC_013204.1 | Eggerthella lenta DSM 2243 |
| 10 | 865013 | 865177 | - | NZ_CP054494.1 | Flavobacterium columnare |
| 11 | 211934 | 212089 | + | NC_007899.1 | Chlamydia felis Fe/C-56 |
| 12 | 959390 | 959545 | - | NC_017287.1 | Chlamydia psittaci 6BC |
| 13 | 402507 | 402692 | + | NZ_CP006950.1 | Dehalococcoides mccartyi CG4 |
| 14 | 624016 | 624186 | + | NC_017583.1 | Spirochaeta thermophila DSM 6578 |
| 15 | 506484 | 506654 | + | NC_018068.1 | Desulfosporosinus acidiphilus SJ4 |
| 16 | 2747763 | 2747918 | + | NZ_LR134441.1 | Kaistella antarctica |
| 17 | 244874 | 245044 | + | NC_018515.1 | Desulfosporosinus meridiei DSM 13257 |
| 18 | 243603 | 243773 | + | NC_016584.1 | Desulfosporosinus orientis DSM 765 |
| 19 | 1348152 | 1348316 | + | NZ_CP038810.1 | Flavobacterium sangjuense |
| 20 | 2410372 | 2410557 | - | NZ_AP021875.1 | Desulfosarcina widdelii |
| 21 | 3401586 | 3401750 | + | NZ_CP037933.1 | Flavobacterium nackdongense |
| 22 | 1082182 | 1082367 | + | NZ_CP018099.1 | Caldithrix abyssi DSM 13497 |
| 23 | 813988 | 814152 | - | NZ_CP029463.1 | Flavobacterium sediminis |
| 24 | 2351392 | 2351580 | + | NZ_CP043612.1 | Flavobacterium nitrogenifigens |
| 25 | 2372922 | 2373107 | - | NZ_AP021874.1 | Desulfosarcina alkanivorans |
| 26 | 133995 | 134180 | + | NC_014377.1 | Thermosediminibacter oceani DSM 16646 |
| 27 | 3136574 | 3136738 | + | NC_011729.1 | Gloeothece citriformis PCC 7424 |
| 28 | 337478 | 337642 | - | NZ_CP019419.1 | Polaribacter reichenbachii |
| 29 | 814382 | 814537 | - | NZ_CP022957.1 | Maribacter cobaltidurans |
| 30 | 1937829 | 1937999 | - | NC_014209.1 | Thermoanaerobacter mathranii subsp. mathranii str. A3 |
| 31 | 1958059 | 1958229 | - | NZ_CP009170.1 | Thermoanaerobacter kivui |
| 32 | 2005156 | 2005326 | - | NC_013921.1 | Thermoanaerobacter italicus Ab9 |
| 33 | 3178889 | 3179044 | + | NZ_CP022986.1 | Chryseobacterium camelliae |
| 34 | 2016337 | 2016522 | - | NZ_CP007514.1 | Rubrobacter radiotolerans |
| 35 | 1701740 | 1701895 | + | NZ_CP033932.1 | Chryseobacterium bernardetii |
| 36 | 4046280 | 4046435 | + | NZ_LR134289.1 | Chryseobacterium gleum |
| 37 | 224019 | 224174 | - | NZ_CP015840.1 | Chlamydia gallinacea 08-1274/3 |
| 38 | 787409 | 787594 | + | NC_013525.1 | Thermobaculum terrenum ATCC BAA-798 |
| 39 | 6984567 | 6984752 | + | NZ_AP021876.1 | Desulfosarcina ovata subsp. sediminis |
| 40 | 3261491 | 3261655 | - | NZ_CP034161.1 | Epilithonimonas vandammei |
| 41 | 1881030 | 1881221 | - | NZ_LR215974.1 | Chryseobacterium taihuense |
| 42 | 1977961 | 1978152 | + | NZ_LT906465.1 | Chryseobacterium taklimakanense |
| 43 | 201478 | 201633 | + | NC_002620.2 | Chlamydia muridarum str. Nigg |
| 44 | 2077646 | 2077804 | - | NC_010729.1 | Porphyromonas gingivalis ATCC 33277 |
| 45 | 193839 | 194027 | - | NZ_CP017479.1 | Flavobacterium gilvum |
| 46 | 409905 | 410075 | + | NZ_CP048436.1 | Flavonifractor plautii |
| 47 | 1180754 | 1180918 | + | NZ_CP017688.1 | Flavobacterium crassostreae |
| 48 | 1727930 | 1728094 | + | NZ_CP020918.1 | Flavobacterium faecale |
| 49 | 2062554 | 2062745 | + | NC_018013.1 | Aequorivita sublithincola DSM 14238 |
| 50 | 901149 | 901304 | - | NC_022439.1 | Chlamydia pecorum PV3056/3 |
| 51 | 173617 | 173772 | - | NZ_CP028811.1 | Flavobacterium magnum |
| 52 | 308567 | 308737 | + | NZ_CP007032.1 | Desulfitobacterium metallireducens DSM 15288 |
| 53 | 3725441 | 3725611 | + | NZ_CP017269.1 | Geosporobacter ferrireducens |
| 54 | 1271419 | 1271589 | - | NZ_LT821227.1 | Phoenicibacter congonensis |
| 55 | 238324 | 238494 | + | NC_009253.1 | Desulfotomaculum reducens MI-1 |
| 56 | 3382498 | 3382689 | + | NZ_CP012898.1 | Algibacter alginicilyticus |
| 57 | 2271690 | 2271845 | - | NZ_CP019288.1 | Kordia antarctica |
| 58 | 467928 | 468098 | + | NC_019903.1 | Desulfitobacterium dichloroeliminans LMG P-21439 |
| 59 | 853285 | 853470 | + | NC_011297.1 | Dictyoglomus thermophilum H-6-12 |
| 60 | 3383356 | 3383541 | + | NC_013720.1 | Pirellula staleyi DSM 6068 |
| 61 | 446408 | 446578 | + | NZ_AP022873.1 | Dissulfurispira thermophila |
| 62 | 420693 | 420863 | + | NC_014964.1 | Thermoanaerobacter brockii subsp. finnii Ako-1 |
| 63 | 2288325 | 2288495 | - | NC_015958.1 | Thermoanaerobacter wiegelii Rt8.B1 |
| 64 | 1017899 | 1018123 | + | NZ_LT605205.1 | Proteiniphilum saccharofermentans |
| 65 | 1614483 | 1614653 | - | NZ_CP013661.2 | Planococcus kocurii |
| 66 | 148224 | 148394 | + | NZ_CP019401.1 | Planococcus faecalis |
| 67 | 5772922 | 5773092 | - | NZ_CP022753.1 | Nocardiopsis gilva YIM 90087 |
| 68 | 793161 | 793316 | - | NZ_CP025938.1 | Tamlana carrageenivorans |
| 69 | 1020674 | 1020859 | + | NC_011661.1 | Dictyoglomus turgidum DSM 6724 |
| 70 | 1345454 | 1345624 | - | NC_015318.1 | Hippea maritima DSM 10411 |
| 71 | 2658548 | 2658718 | - | NC_008346.1 | Syntrophomonas wolfei subsp. wolfei str. Goettingen G311 |
| 72 | 1119679 | 1119864 | + | NC_013595.1 | Streptosporangium roseum DSM 43021 |
| 73 | 1923803 | 1923988 | + | NC_008554.1 | Syntrophobacter fumaroxidans MPOB |
| 74 | 310419 | 310589 | + | NC_015589.1 | Desulfotomaculum ruminis DSM 2154 |
| 75 | 1597228 | 1597419 | + | NZ_CP053352.1 | Winogradskyella helgolandensis |
| 76 | 324302 | 324487 | + | NZ_CP027226.1 | Fastidiosipila sanguinis |
| 77 | 3219073 | 3219237 | - | NZ_CP054012.1 | Parabacteroides distasonis |
| 78 | 4216781 | 4216966 | + | NZ_CP061725.1 | Micromonospora craniellae |
| 79 | 358097 | 358252 | - | NZ_CP061725.1 | Micromonospora craniellae |
| 80 | 226195 | 226380 | + | NC_010718.1 | Natranaerobius thermophilus JW/NM-WN-LF |
| 81 | 6589881 | 6590066 | - | NZ_CP058322.1 | Micromonospora carbonacea |
| 82 | 877577 | 877762 | + | NC_017094.1 | Leptospirillum ferrooxidans C2-3 |
| 83 | 215528 | 215698 | + | NC_013895.2 | Mageeibacillus indolicus UPII9-5 |
| 84 | 4829332 | 4829517 | - | NZ_CP045309.1 | Micromonospora terminaliae |
| 85 | 6176596 | 6176781 | - | NC_014391.1 | Micromonospora aurantiaca ATCC 27029 |
| 86 | 4467468 | 4467653 | - | NC_009380.1 | Salinispora tropica CNB-440 |
| 87 | 3270223 | 3270396 | - | NC_009380.1 | Salinispora tropica CNB-440 |
| 88 | 7625299 | 7625469 | - | NC_009142.1 | Saccharopolyspora erythraea NRRL 2338 |
| 89 | 136051 | 136221 | + | NZ_CP016540.2 | Planococcus versutus |
| 90 | 830334 | 830519 | + | NZ_CP031115.1 | Rubrobacter indicoceani |
| 91 | 665759 | 665944 | + | NC_017098.1 | Spirochaeta africana DSM 8902 |
| 92 | 5929279 | 5929464 | - | NZ_AP023355.1 | Actinocatenispora thailandica |
| 93 | 4428900 | 4429085 | - | NZ_CP023147.1 | Mycobacterium marseillense |
| 94 | 2368643 | 2368813 | - | NC_018664.1 | Gottschalkia acidurici 9a |
| 95 | 168213 | 168383 | + | NZ_CP016543.2 | Planococcus donghaensis |
| 96 | 69918 | 70082 | - | NZ_CP024727.1 | Prevotella intermedia |
| 97 | 220060 | 220245 | + | NC_015519.1 | Tepidanaerobacter acetatoxydans Re1 |
| 98 | 3367436 | 3367606 | - | NZ_CP025197.1 | Acetivibrio saccincola |
| 99 | 3232687 | 3232872 | + | NZ_CP038267.1 | Nocardioides euryhalodurans |
| 100 | 8291208 | 8291393 | + | NZ_AP022870.1 | Phytohabitans flavus |
| 101 | 4379186 | 4379371 | + | NZ_AP022871.1 | Phytohabitans suffuscus |
| 102 | 3259004 | 3259168 | - | NZ_CP069440.1 | Phocaeicola coprophilus |
| 103 | 177997 | 178182 | + | NZ_LN824141.1 | Defluviitoga tunisiensis |
| 104 | 5200091 | 5200276 | + | NZ_AP022582.1 | Mycobacterium seoulense |
| 105 | 2948936 | 2949106 | - | NC_014212.1 | Meiothermus silvanus DSM 9946 |
| 106 | 5000456 | 5000641 | + | NZ_AP022619.1 | Mycobacterium paraseoulense |
| 107 | 846858 | 847028 | + | NC_009943.1 | Desulfococcus oleovorans Hxd3 |
| 108 | 5271834 | 5271998 | + | NZ_CP030840.1 | Acidisarcina polymorpha |
| 109 | 249452 | 249637 | + | NC_014926.1 | Thermovibrio ammonificans HB-1 |
| 110 | 148352 | 148522 | + | NZ_LT603683.1 | Bacillus glycinifermentans |
| 111 | 3342336 | 3342560 | - | NZ_CP016534.2 | Planococcus antarcticus DSM 14505 |
| 112 | 152739 | 152909 | + | NZ_CP016534.2 | Planococcus antarcticus DSM 14505 |
| 113 | 7231587 | 7231772 | + | NZ_CP015163.1 | Amycolatopsis albispora |
| 114 | 2417703 | 2417888 | + | NZ_CP043474.1 | Mycobacterium grossiae |
| 115 | 2221224 | 2221388 | + | NZ_AP019307.1 | Nocardioides baekrokdamisoli |
| 116 | 148079 | 148249 | + | NZ_CP016537.2 | Planococcus halocryophilus |
| 117 | 1779184 | 1779369 | - | NC_013939.1 | Deferribacter desulfuricans SSM1 |
| 118 | 2176778 | 2176948 | - | NC_017448.1 | Fibrobacter succinogenes subsp. succinogenes S85 |
| 119 | 1125465 | 1125641 | - | NC_014330.1 | Brachyspira pilosicoli 95/1000 |
| 120 | 2250708 | 2250884 | + | NZ_CP046932.1 | Brachyspira hyodysenteriae |
| 121 | 1284387 | 1284563 | - | NZ_CP019914.1 | Brachyspira hampsonii |
| 122 | 2106864 | 2107040 | + | NC_014150.1 | Brachyspira murdochii DSM 12563 |
| 123 | 145711 | 145881 | + | NZ_CP016538.2 | Planococcus maritimus |
| 124 | 2870974 | 2871150 | - | NC_017243.1 | Brachyspira intermedia PWS/A |
| 125 | 1616114 | 1616302 | - | NC_012438.1 | Sulfurihydrogenibium azorense Az-Fu1 |
| 126 | 646288 | 646473 | + | NZ_LS483423.1 | Jonesia denitrificans |
| 127 | 145083 | 145253 | + | NZ_CP016539.2 | Planococcus plakortidis |
| 128 | 349881 | 350051 | + | NC_021184.1 | Desulfoscipio gibsoniae DSM 7213 |
| 129 | 759326 | 759490 | + | NC_014387.1 | Butyrivibrio proteoclasticus B316 |
| 130 | 3333870 | 3334040 | + | NZ_CP013659.2 | Planococcus rifietoensis |
| 131 | 445598 | 445768 | + | NC_015732.1 | Treponema caldarium DSM 7334 |
| 132 | 3050388 | 3050552 | + | NZ_CP012040.1 | Cyclobacterium amurskyense |
| 133 | 2537316 | 2537486 | - | NZ_CP013862.1 | Lentibacillus amyloliquefaciens |
| 134 | 3039547 | 3039711 | + | NC_015914.1 | Cyclobacterium marinum DSM 745 |
| 135 | 759780 | 759965 | + | NC_022116.1 | Amycolatopsis mediterranei RB |
| 136 | 1199750 | 1199920 | + | NZ_CP017703.1 | Aeribacillus pallidus |
| 137 | 1101238 | 1101408 | - | NZ_AP022599.1 | Mycolicibacterium pulveris |
| 138 | 145552 | 145722 | + | NZ_CP059540.1 | Planococcus maritimus |
| 139 | 2816589 | 2816774 | - | NC_020134.1 | Thermoclostridium stercorarium subsp. stercorarium DSM 8532 |
| 140 | 3659586 | 3659750 | + | NZ_CP044344.1 | Nocardioides cynanchi |
| 141 | 1402926 | 1403111 | + | NC_017310.1 | Desulfovibrio vulgaris RCH1 |
| 142 | 1054361 | 1054531 | - | NZ_CP022096.2 | Staphylococcus pettenkoferi |
| 143 | 256343 | 256513 | + | NZ_CP053989.1 | Niallia circulans |
| 144 | 3319922 | 3320107 | - | NZ_CP043661.1 | Kribbella qitaiheensis |
| 145 | 1266865 | 1267050 | - | NZ_AP022596.1 | Mycolicibacterium helvum |
| 146 | 1594216 | 1594380 | - | NZ_LS483427.1 | Arcanobacterium haemolyticum |
| 147 | 2151009 | 2151194 | - | NZ_LR134442.1 | Propionibacterium australiense |
| 148 | 4430442 | 4430627 | - | NZ_CP011112.1 | Luteipulveratus mongoliensis |
| 149 | 2198119 | 2198304 | - | NZ_AP022577.1 | Mycolicibacterium aubagnense |
| 150 | 971544 | 971729 | + | NZ_CP039291.1 | Cellulomonas shaoxiangyii |
| 151 | 3251790 | 3251975 | - | NZ_AP022586.1 | Mycolicibacterium litorale |
| 152 | 2276523 | 2276708 | - | NC_007519.1 | Desulfovibrio alaskensis G20 |
| 153 | 10399909 | 10400094 | - | NZ_CP034550.1 | Saccharothrix syringae |
| 154 | 939330 | 939515 | - | NC_011959.1 | Thermomicrobium roseum DSM 5159 |
| 155 | 1057312 | 1057482 | - | NZ_CP022315.1 | Virgibacillus phasianinus |
| 156 | 1113005 | 1113190 | + | NC_015514.1 | Cellulomonas fimi ATCC 484 |
| 157 | 166093 | 166263 | - | NZ_CP022437.1 | Virgibacillus necropolis |
| 158 | 1940237 | 1940407 | - | NZ_CP022983.1 | Cytobacillus kochii |
| 159 | 305376 | 305540 | + | NZ_LT906441.1 | Cutibacterium granulosum |
| 160 | 2512498 | 2512683 | + | NZ_AP022595.1 | Mycolicibacterium sarraceniae |
| 161 | 1183196 | 1183381 | + | NZ_CP011491.1 | Mycolicibacterium vaccae 95051 |
| 162 | 477856 | 478041 | - | NZ_CP015079.1 | Nocardioides dokdonensis FR1436 |
| 163 | 4762468 | 4762653 | + | NZ_AP022573.1 | Mycobacterium saskatchewanense |
| 164 | 3473047 | 3473232 | - | NZ_AP022590.1 | Mycobacterium mantenii |
| 165 | 699460 | 699645 | + | NC_013530.1 | Xylanimonas cellulosilytica DSM 15894 |
| 166 | 3508260 | 3508445 | + | NZ_CP035495.1 | Xylanimonas allomyrinae |
| 167 | 272904 | 273074 | + | NZ_CP011366.1 | Salinicoccus halodurans |
| 168 | 87782 | 87952 | + | NZ_CP014150.1 | Paeniclostridium sordellii |
| 169 | 8666789 | 8666974 | - | NZ_CP016174.1 | Amycolatopsis orientalis |
| 170 | 2375185 | 2375355 | - | NZ_CP023434.1 | Suicoccus acidiformans |
| 171 | 2743876 | 2744061 | - | NC_014831.1 | Thermaerobacter marianensis DSM 12885 |
| 172 | 1633079 | 1633249 | + | NZ_CP063356.1 | Anaerobacillus isosaccharinicus |
| 173 | 50827 | 50997 | - | NZ_CP020772.1 | Halobacillus mangrovi |
| 174 | 4682127 | 4682312 | - | NZ_AP022561.1 | Mycolicibacterium aichiense |
| 175 | 1639459 | 1639644 | - | NC_014761.1 | Oceanithermus profundus DSM 14977 |
| 176 | 18388 | 18570 | - | NC_021064.1 | Cutibacterium avidum 44067 |
| 177 | 1465269 | 1465433 | + | NZ_CP011310.1 | Aurantiacibacter atlanticus |
| 178 | 3390182 | 3390367 | - | NZ_CP026538.1 | Desulfovibrio carbinolicus |
| 179 | 1346679 | 1346864 | + | NC_012796.1 | Desulfovibrio magneticus RS-1 |
| 180 | 652529 | 652714 | + | NZ_CP023865.1 | Actinoplanes teichomyceticus ATCC 31121 |
| 181 | 1147762 | 1147950 | + | NC_012440.1 | Persephonella marina EX-H1 |
| 182 | 3740441 | 3740626 | - | NZ_AP022617.1 | Mycolicibacterium monacense |
| 183 | 2482325 | 2482510 | + | NZ_AP022588.1 | Mycolicibacterium sediminis |
| 184 | 3306147 | 3306332 | + | NZ_AP022600.1 | Mycolicibacterium tokaiense |
| 185 | 5472607 | 5472792 | + | NZ_CP033972.1 | Gordonia insulae |
| 186 | 1936499 | 1936672 | + | NZ_CP033972.1 | Gordonia insulae |
| 187 | 204225 | 204395 | - | NZ_CP066042.1 | Staphylococcus saccharolyticus |
| 188 | 714235 | 714405 | + | NZ_LR134242.1 | Staphylococcus warneri |
| 189 | 1433181 | 1433351 | - | NZ_CP007601.1 | Staphylococcus capitis subsp. capitis |
| 190 | 760946 | 761116 | + | NZ_CP035288.1 | Staphylococcus epidermidis |
| 191 | 756769 | 756939 | - | NC_022737.1 | Staphylococcus pasteuri SP1 |
| 192 | 792097 | 792267 | + | NZ_AP018587.1 | Staphylococcus caprae |
| 193 | 2074328 | 2074498 | - | NZ_CP035485.1 | Salicibibacter halophilus |
| 194 | 1520504 | 1520674 | - | NZ_CP014161.1 | Aerococcus urinae |
| 195 | 5570005 | 5570190 | + | NZ_AP022601.1 | Mycobacterium gallinarum |
| 196 | 3298250 | 3298435 | - | NZ_CP072827.1 | Streptomyces mobaraensis NBRC 13819 = DSM 40847 |
| 197 | 2196848 | 2197018 | + | NC_006270.3 | Bacillus licheniformis DSM 13 = ATCC 14580 |
| 198 | 139886 | 140056 | + | NC_006270.3 | Bacillus licheniformis DSM 13 = ATCC 14580 |
| 199 | 4113502 | 4113687 | - | NZ_CP022208.1 | Rhodococcus pyridinivorans |
| 200 | 3775410 | 3775595 | - | NZ_LT906450.1 | Rhodococcus rhodochrous |
| 201 | 378096 | 378266 | - | NC_014246.1 | Mobiluncus curtisii ATCC 43063 |
| 202 | 1667048 | 1667233 | + | NZ_CP041694.1 | Cellulosimicrobium cellulans |
| 203 | 1136477 | 1136662 | + | NZ_LR134356.1 | Mycolicibacterium aurum |
| 204 | 3294427 | 3294612 | - | NC_013521.1 | Sanguibacter keddieii DSM 10542 |
| 205 | 1513003 | 1513173 | + | NZ_CP033732.1 | Staphylococcus hominis |
| 206 | 1779361 | 1779531 | - | NZ_CP013911.1 | Staphylococcus haemolyticus |
| 207 | 2238236 | 2238406 | + | NZ_CP014022.1 | Staphylococcus lugdunensis |
| 208 | 2165882 | 2166052 | - | NZ_LT906460.1 | Staphylococcus simiae |
| 209 | 2267356 | 2267526 | - | NZ_LR134304.1 | Staphylococcus schweitzeri |
| 210 | 2311496 | 2311666 | - | NC_007795.1 | Staphylococcus aureus subsp. aureus NCTC 8325 |
| 211 | 2030377 | 2030589 | + | NC_009664.2 | Kineococcus radiotolerans SRS30216 = ATCC BAA-149 |
| 212 | 1424109 | 1424294 | + | NC_008726.1 | Mycolicibacterium vanbaalenii PYR-1 |
| 213 | 150209 | 150379 | + | NC_017668.1 | Halobacillus halophilus DSM 2266 |
| 214 | 153655 | 153825 | + | NZ_CP017962.1 | Virgibacillus halodenitrificans |
| 215 | 1368459 | 1368629 | - | NZ_CP018622.1 | Virgibacillus dokdonensis |
| 216 | 2102791 | 2102946 | + | NC_019689.1 | Pleurocapsa sp. PCC 7327 |
| 217 | 242688 | 242873 | - | NZ_AP022598.1 | Mycolicibacterium parafortuitum |
| 218 | 474300 | 474476 | - | NZ_CP042909.1 | Thermosulfurimonas marina |
| 219 | 1487569 | 1487724 | - | NZ_LN849456.1 | Devriesea agamarum |
| 220 | 2295650 | 2295820 | + | NZ_CP023665.1 | Bacillus paralicheniformis |
| 221 | 172366 | 172536 | + | NZ_CP023665.1 | Bacillus paralicheniformis |
| 222 | 1793448 | 1793618 | + | NZ_CP021434.1 | Tumebacillus avium |
| 223 | 5325830 | 5325994 | - | NZ_AP023440.1 | Streptomyces glomeroaurantiacus |
| 224 | 607219 | 607392 | + | NZ_CP070228.1 | Arcanobacterium phocisimile |
| 225 | 5776077 | 5776262 | - | NZ_CP015136.1 | Luteitalea pratensis |
| 226 | 1991935 | 1992105 | + | NZ_AP023172.1 | Rhodococcus qingshengii |
| 227 | 5526014 | 5526199 | - | NZ_AP022574.1 | Mycolicibacterium psychrotolerans |
| 228 | 661344 | 661529 | + | NC_017093.1 | Actinoplanes missouriensis 431 |
| 229 | 1815526 | 1815711 | + | NZ_CP040635.1 | Acidipropionibacterium jensenii |
| 230 | 5484535 | 5484753 | - | NZ_CP070326.1 | Streptomyces noursei |
| 231 | 2569602 | 2569787 | + | NZ_CP060713.1 | Nocardioides mesophilus |
| 232 | 1002027 | 1002212 | + | NC_022657.1 | Actinoplanes friuliensis DSM 7358 |
| 233 | 186410 | 186595 | + | NC_014378.1 | Acetohalobium arabaticum DSM 5501 |
| 234 | 1755196 | 1755381 | - | NZ_CP044548.2 | Janibacter melonis |
| 235 | 1988765 | 1988950 | - | NZ_CP010904.1 | Kiritimatiella glycovorans |
| 236 | 1946869 | 1947087 | + | NC_015635.1 | Microlunatus phosphovorus NM-1 |
| 237 | 1560066 | 1560236 | - | NZ_CP038452.1 | Thermus caldilimi |
| 238 | 3072658 | 3072828 | - | NZ_CP048104.1 | Kroppenstedtia pulmonis |
| 239 | 325726 | 325911 | + | NZ_CP010822.1 | Thermus aquaticus Y51MC23 |
| 240 | 5491559 | 5491720 | - | NC_013440.1 | Haliangium ochraceum DSM 14365 |
| 241 | 500241 | 500396 | + | NC_015672.1 | Flexistipes sinusarabici DSM 4947 |
| 242 | 2196489 | 2196659 | - | NZ_CP033460.1 | Staphylococcus debuckii |
| 243 | 1430766 | 1430957 | + | NZ_CP033460.1 | Staphylococcus debuckii |
| 244 | 1849354 | 1849524 | - | NZ_AP022826.1 | Nitrosophilus labii |
| 245 | 1090724 | 1090894 | - | NC_017096.1 | Caldisericum exile AZM16c01 |
| 246 | 2400099 | 2400284 | - | NZ_AP022593.1 | Mycolicibacterium arabiense |
| 247 | 3319937 | 3320122 | - | NZ_AP022614.1 | Mycobacterium parmense |
| 248 | 424333 | 424518 | - | NC_023062.1 | Mycoplasma ovis str. Michigan |
| 249 | 2315663 | 2315827 | + | NZ_CP023777.1 | Chitinophaga caeni |
| 250 | 264258 | 264443 | + | NC_019386.1 | Thermus oshimai JL-2 |
| 251 | 2623165 | 2623329 | - | NZ_LS483468.1 | Rhodococcus coprophilus |
| 252 | 5311386 | 5311550 | - | NZ_CP047020.1 | Streptomyces broussonetiae |
| 253 | 4441254 | 4441448 | + | NZ_CP016616.1 | Microvirga ossetica |
| 254 | 1719212 | 1719397 | - | NC_015387.1 | Marinithermus hydrothermalis DSM 14884 |
| 255 | 1034641 | 1034826 | - | NZ_CP008796.1 | Thermodesulfobacterium commune DSM 2178 |
| 256 | 901476 | 901646 | + | NZ_CP018776.1 | Staphylococcus condimenti |
| 257 | 913532 | 913717 | + | NC_015671.1 | Cellulomonas gilvus ATCC 13127 |
| 258 | 3071444 | 3071608 | + | NZ_CP031194.1 | Streptomyces paludis |
| 259 | 5779706 | 5779873 | - | NC_015312.1 | Pseudonocardia dioxanivorans CB1190 |
| 260 | 9212572 | 9212757 | - | NZ_CP007155.1 | Kutzneria albida DSM 43870 |
| 261 | 1337294 | 1337479 | + | NZ_CP016312.1 | Thermus brockianus |
| 262 | 1551198 | 1551383 | - | NC_014758.1 | Calditerrivibrio nitroreducens DSM 19672 |
| 263 | 985951 | 986136 | - | NZ_CP007519.1 | Trueperella pyogenes |
| 264 | 347607 | 347792 | + | NC_018149.1 | Mycoplasma wenyonii str. Massachusetts |
| 265 | 1156795 | 1156950 | + | NC_013523.1 | Sphaerobacter thermophilus DSM 20745 |
| 266 | 571343 | 571528 | - | NZ_LR134476.1 | Trueperella bialowiezensis |
| 267 | 273797 | 273985 | + | NZ_CP007028.1 | Thermocrinis ruber |
| 268 | 379306 | 379500 | - | NZ_CP040818.1 | Paraoceanicella profunda |
| 269 | 1322948 | 1323118 | + | NC_023151.1 | Thermotoga maritima MSB8 |
| 270 | 4674261 | 4674425 | + | NZ_CP042435.1 | Panacibacter ginsenosidivorans |
| 271 | 5668223 | 5668387 | - | NC_003155.5 | Streptomyces avermitilis MA-4680 = NBRC 14893 |
| 272 | 4262271 | 4262432 | + | NZ_CP030073.1 | Streptomyces cadmiisoli |
| 273 | 9517208 | 9517372 | + | NZ_CP063373.1 | Streptomyces ferrugineus |
| 274 | 1170889 | 1171074 | - | NZ_CP062938.1 | Bifidobacterium eulemuris |
| 275 | 415450 | 415635 | + | NZ_CP014141.1 | Thermus parvatiensis |
| 276 | 2346881 | 2347048 | - | NC_013223.1 | Desulfohalobium retbaense DSM 5692 |
| 277 | 428330 | 428512 | + | NZ_AP018721.1 | Sulfuritortus calidifontis |
| 278 | 1584626 | 1584811 | - | NC_006461.1 | Thermus thermophilus HB8 |
| 279 | 2119803 | 2119973 | + | NZ_CP015108.1 | Sporosarcina ureae |
| 280 | 5994578 | 5994763 | - | NZ_CP036291.1 | Pirellulimonas nuda |
| 281 | 145052 | 145222 | + | NC_018704.1 | Amphibacillus xylanus NBRC 15112 |
| 282 | 855863 | 856057 | - | NZ_CP015093.1 | Salipiger abyssi |
| 283 | 1332365 | 1332535 | + | NC_013642.1 | Thermotoga naphthophila RKU-10 |
| 284 | 1308761 | 1308931 | + | NC_009486.1 | Thermotoga petrophila RKU-1 |
| 285 | 988994 | 989164 | + | NC_011978.1 | Thermotoga neapolitana DSM 4359 |
| 286 | 1687467 | 1687652 | + | NZ_CP062948.1 | Bifidobacterium lemurum |
| 287 | 2868868 | 2869059 | - | NZ_CP029145.1 | Hymenobacter nivis |
| 288 | 383409 | 383588 | + | NZ_CP014835.1 | Streptococcus halotolerans |
| 289 | 1885263 | 1885436 | + | NZ_CP066060.1 | Actinomyces oris |
| 290 | 10850786 | 10850971 | + | NZ_CP016211.1 | Minicystis rosea |
| 291 | 914186 | 914359 | - | NZ_AP012331.1 | Bifidobacterium scardovii JCM 12489 = DSM 13734 |
| 292 | 3688836 | 3689000 | - | NZ_CP011451.1 | Nitrosomonas communis |
| 293 | 1750472 | 1750642 | - | NZ_CP041305.1 | Cytobacillus ciccensis |
| 294 | 405777 | 405962 | + | NZ_AP012325.1 | Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043 |
| 295 | 446053 | 446238 | + | NZ_CP025199.1 | Bifidobacterium pseudocatenulatum |
| 296 | 438852 | 439037 | + | NZ_CP028341.1 | Bifidobacterium adolescentis |
| 297 | 534622 | 534807 | + | NZ_AP012326.1 | Bifidobacterium dentium JCM 1195 = DSM 20436 |
| 298 | 2147926 | 2148090 | - | NZ_AP012326.1 | Bifidobacterium dentium JCM 1195 = DSM 20436 |
| 299 | 143620 | 143790 | + | NZ_CP042593.1 | Bacillus dafuensis |
| 300 | 399768 | 399941 | - | NZ_LR134357.1 | Actinomyces israelii |
| 301 | 133690 | 133860 | + | NZ_CP024109.1 | Bacillus cytotoxicus |
| 302 | 4986620 | 4986790 | - | NZ_CP040336.1 | Bacillus luti |
| 303 | 127383 | 127553 | + | NC_007530.2 | Bacillus anthracis str. 'Ames Ancestor' |
| 304 | 132826 | 132996 | + | NZ_CP064875.1 | Bacillus toyonensis |
| 305 | 133028 | 133198 | + | NC_011725.1 | Bacillus cereus B4264 |
| 306 | 132747 | 132917 | + | NZ_CP032365.1 | Bacillus wiedmannii |
| 307 | 1898362 | 1898547 | - | NZ_CP006712.1 | Bifidobacterium breve JCM 7017 |
| 308 | 1990371 | 1990556 | - | NZ_CP026999.1 | Bifidobacterium longum |
| 309 | 822836 | 823018 | - | NC_016638.1 | Mycoplasma haemocanis str. Illinois |
| 310 | 1050117 | 1050299 | - | NC_014970.1 | Mycoplasma haemofelis str. Langford 1 |
| 311 | 775672 | 775845 | - | NZ_CP025227.1 | Actinomyces wuliandei |
| 312 | 446319 | 446504 | + | NZ_AP017378.1 | Desulfovibrio ferrophilus |
| 313 | 960818 | 961003 | + | NZ_CP045529.1 | Luteimicrobium xylanilyticum |
| 314 | 1171861 | 1172031 | - | NZ_LS483446.1 | Helicobacter mustelae |
| 315 | 973666 | 973851 | - | NZ_CP071376.1 | Clostridium gasigenes |
| 316 | 3255455 | 3255649 | + | NC_014664.1 | Rhodomicrobium vannielii ATCC 17100 |
| 317 | 2094908 | 2095102 | + | NZ_CP042582.1 | Hypericibacter adhaerens |
| 318 | 206167 | 206361 | + | NC_023135.1 | Leisingera methylohalidivorans DSM 14336 |
| 319 | 3192683 | 3192877 | - | NZ_CP042906.1 | Hypericibacter terrae |
| 320 | 220138 | 220332 | + | NZ_CP015230.1 | Epibacterium mobile F1926 |
| 321 | 681008 | 681181 | - | NZ_CP053642.1 | Actinomyces marmotae |
| 322 | 1061891 | 1062076 | + | NZ_CP025198.1 | Acidipropionibacterium virtanenii |
| 323 | 11071592 | 11071777 | - | NC_010162.1 | Sorangium cellulosum So ce56 |
| 324 | 1708011 | 1708196 | - | NC_018720.1 | Bifidobacterium asteroides PRL2011 |
| 325 | 1822362 | 1822535 | - | NZ_CP014228.1 | Actinomyces radicidentis |
| 326 | 1444085 | 1444255 | - | NC_017095.1 | Fervidobacterium pennivorans DSM 9078 |
| 327 | 1393360 | 1393545 | - | NZ_CP006018.1 | Bifidobacterium indicum LMG 11587 = DSM 20214 |
| 328 | 1430488 | 1430673 | - | NZ_CP007287.1 | Bifidobacterium coryneforme |
| 329 | 1452137 | 1452322 | - | NZ_AP013035.1 | Thermosulfidibacter takaii ABI70S6 |
| 330 | 3083004 | 3083210 | - | NZ_CP022579.1 | Oryzomicrobium terrae |
| 331 | 3242888 | 3243082 | - | NZ_CP065915.1 | Pelagovum pacificum |
| 332 | 1157174 | 1157362 | - | NC_000918.1 | Aquifex aeolicus VF5 |
| 333 | 1923526 | 1923708 | - | NC_014632.1 | Ilyobacter polytropus DSM 2926 |
| 334 | 1217503 | 1217673 | - | NC_009718.1 | Fervidobacterium nodosum Rt17-B1 |
| 335 | 164259 | 164453 | + | NZ_CP042261.1 | Qingshengfaniella alkalisoli |
| 336 | 1395646 | 1395810 | + | NC_014643.1 | Rothia dentocariosa ATCC 17931 |
| 337 | 2064026 | 2064220 | - | NZ_CP025430.1 | Paracoccus zhejiangensis |
| 338 | 777254 | 777409 | + | NC_013959.1 | Sideroxydans lithotrophicus ES-1 |
| 339 | 1153190 | 1153375 | + | NZ_CP011801.1 | Nitrospira moscoviensis |
| 340 | 498585 | 498779 | + | NC_003911.12 | Ruegeria pomeroyi DSS-3 |
| 341 | 330645 | 330839 | + | NZ_AP018786.1 | Sutterella megalosphaeroides |
| 342 | 1856621 | 1856776 | - | NZ_CP041730.1 | Chitinimonas arctica |
| 343 | 1723797 | 1723982 | + | NZ_CP011786.1 | Bifidobacterium actinocoloniiforme DSM 22766 |
| 344 | 964279 | 964464 | + | NZ_CP012159.1 | Chondromyces crocatus |
| 345 | 2867545 | 2867751 | - | NC_005363.1 | Bdellovibrio bacteriovorus HD100 |
| 346 | 331762 | 331932 | + | NZ_CP013235.1 | Collimonas arenae |
| 347 | 444182 | 444346 | + | NZ_CP013236.1 | Collimonas pratensis |
| 348 | 718309 | 718473 | + | NZ_CP013232.1 | Collimonas fungivorans |
| 349 | 2023670 | 2023864 | + | NZ_CP040882.1 | Sutterella faecalis |
| 350 | 889453 | 889638 | - | NZ_CP008802.1 | Actinotignum schaalii |
| 351 | 2786861 | 2787016 | + | NZ_LT671418.1 | Herminiimonas arsenitoxidans |
| 352 | 642254 | 642448 | - | NZ_CP024422.1 | Paracoccus yeei |
| 353 | 1119654 | 1119848 | - | NZ_CP030239.1 | Paracoccus mutanolyticus |
| 354 | 1600045 | 1600239 | + | NZ_CP020612.1 | Paracoccus contaminans |
| 355 | 844326 | 844520 | - | NZ_CP014327.1 | Halocynthiibacter arcticus |
| 356 | 2444620 | 2444847 | - | NZ_LR134302.1 | Achromobacter spanius |
| 357 | 6331900 | 6332127 | - | NZ_CP038034.1 | Achromobacter insolitus |
| 358 | 4900646 | 4900873 | - | NZ_CP053986.1 | Achromobacter denitrificans |
| 359 | 3295511 | 3295717 | + | NZ_CP047650.1 | Xylophilus rhododendri |
| 360 | 255625 | 255780 | - | NZ_CP031124.1 | Ephemeroptericola cinctiostellae |
| 361 | 765068 | 765232 | + | NZ_CP023422.1 | Janthinobacterium svalbardensis |
| 362 | 4626753 | 4626917 | + | NZ_CP041185.1 | Janthinobacterium tructae |
| 363 | 727004 | 727168 | + | NZ_CP048832.1 | Janthinobacterium lividum |
| 364 | 3296946 | 3297125 | - | NZ_CP012373.2 | Beggiatoa leptomitoformis |
| 365 | 2506168 | 2506362 | - | NZ_CP068055.1 | Sutterella wadsworthensis |
| 366 | 3278710 | 3278937 | - | NC_018518.1 | Bordetella pertussis 18323 |
| 367 | 4127399 | 4127626 | + | NZ_AP019378.1 | Bordetella parapertussis |
| 368 | 5128087 | 5128314 | - | NZ_LR134326.1 | Bordetella bronchiseptica |
| 369 | 47080 | 47235 | + | NZ_CP043146.1 | Bordetella holmesii |
| 370 | 4413831 | 4414058 | - | NZ_CP016440.1 | Bordetella pseudohinzii |
| 371 | 1552435 | 1552662 | - | NZ_CP021395.1 | Bordetella hinzii |
| 372 | 1538638 | 1538832 | + | NZ_CP004372.1 | Roseibacterium elongatum DSM 19469 |
| 373 | 8452331 | 8452486 | - | NZ_LR593886.1 | Gemmata massiliana |
| 374 | 2813143 | 2813337 | + | NZ_CP061498.1 | Roseicitreum antarcticum |
| 375 | 1897747 | 1897920 | + | NZ_CP038033.1 | Nitrosococcus wardiae |
| 376 | 4505087 | 4505257 | - | NZ_CP003915.1 | Advenella mimigardefordensis DPN7 |
| 377 | 569446 | 569601 | + | NZ_AP022853.1 | Sulfurimicrobium lacus |
| 378 | 3405470 | 3405649 | - | NZ_CP035708.1 | Sphaerotilus natans subsp. sulfidivorans |
| 379 | 1540235 | 1540405 | - | NZ_CP047165.1 | Pelistega ratti |
| 380 | 1923318 | 1923473 | - | NC_020813.1 | Bdellovibrio exovorus JSS |
| 381 | 4159541 | 4159711 | - | NC_017964.1 | Advenella kashmirensis WT001 |
| 382 | 1866004 | 1866159 | - | NZ_CP009238.1 | Basilea psittacipulmonis DSM 24701 |
| 383 | 788422 | 788577 | + | NZ_CP017476.1 | Hydrogenophaga crassostreae |
| 384 | 615783 | 615938 | + | NC_014394.1 | Gallionella capsiferriformans ES-2 |
| 385 | 952577 | 952732 | + | NZ_CP024608.1 | Massilia violaceinigra |
| 386 | 2213404 | 2213574 | - | NZ_LR134479.1 | Rothia aeria |
| 387 | 2216340 | 2216567 | + | NZ_CP020046.1 | Thiomonas intermedia |
| 388 | 157179 | 157406 | + | NZ_CP013737.1 | Herbaspirillum rubrisubalbicans M1 |
| 389 | 3410440 | 3410667 | - | NZ_CP018845.1 | Herbaspirillum robiniae |
| 390 | 5306561 | 5306725 | - | NZ_HG322949.1 | Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 |
| 391 | 139828 | 140055 | + | NZ_CP011930.1 | Herbaspirillum seropedicae |
| 392 | 179100 | 179327 | + | NZ_CP037993.1 | Herbaspirillum huttiense |
| 393 | 1143455 | 1143655 | - | NZ_CP027669.1 | Simplicispira suum |
| 394 | 3431889 | 3432074 | - | NZ_AP014924.1 | Limnochorda pilosa |
| 395 | 3373981 | 3374196 | - | NZ_CP016022.1 | Ralstonia insidiosa |
| 396 | 56488 | 56652 | - | NZ_CP018787.1 | Oxalobacter formigenes |
| 397 | 2684262 | 2684432 | + | NZ_CP060414.1 | Neisseria musculi |
| 398 | 1445632 | 1445847 | - | NZ_CP011257.1 | Ralstonia mannitolilytica |
| 399 | 1572091 | 1572306 | - | NZ_CP012943.1 | Ralstonia solanacearum |
| 400 | 3529752 | 3529967 | - | NZ_CP068285.1 | Ralstonia syzygii subsp. celebesensis |
| 401 | 2494757 | 2494927 | - | NZ_LT906434.1 | Neisseria zoodegmatis |
| 402 | 4170618 | 4170773 | - | NZ_CP051298.1 | Alicycliphilus denitrificans |
| 403 | 58701 | 58865 | + | NZ_CP023276.1 | Polynucleobacter difficilis |
| 404 | 63358 | 63528 | + | NZ_CP030086.1 | Polynucleobacter paneuropaeus |
| 405 | 1581710 | 1581880 | + | NZ_LT615228.1 | Polynucleobacter necessarius |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_015555.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF03719.17 | 0.91 | 359 | 1413.0 | same-strand | Ribosomal protein S5, C-terminal domain |
| 2 | PF00333.22 | 0.9 | 357 | 1412.0 | same-strand | Ribosomal protein S5, N-terminal domain |
| 3 | PF00861.24 | 0.9 | 356 | 1032 | same-strand | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast |
| 4 | PF00347.25 | 0.91 | 360 | 460.0 | same-strand | Ribosomal protein L6 |
| 5 | PF00410.21 | 0.9 | 358 | 31 | same-strand | Ribosomal protein S8 |
| 6 | PF00673.23 | 0.91 | 360 | 35 | same-strand | ribosomal L5P family C-terminus |
| 7 | PF00281.21 | 0.91 | 362 | 35 | same-strand | Ribosomal protein L5 |
| 8 | PF17136.6 | 0.89 | 351 | 603.0 | same-strand | Ribosomal proteins 50S L24/mitochondrial 39S L24 |
| 9 | PF00467.31 | 0.77 | 304 | 601 | same-strand | KOW motif |
| 10 | PF00238.21 | 0.91 | 362 | 956 | same-strand | Ribosomal protein L14p/L23e |
| 11 | PF00366.22 | 0.8 | 315 | 1365.0 | same-strand | Ribosomal protein S17 |
| 12 | PF00831.25 | 0.79 | 311 | 1651.0 | same-strand | Ribosomal L29 protein |
| 13 | PF00327.22 | 0.82 | 325 | 1939.0 | same-strand | Ribosomal protein L30p/L7e |
++ More..