Result : Q7N2J6
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | NADH-quinone oxidoreductase subunit K (EC 7.1.1.-) (NADH dehydrogenase I subunit K) (NDH-1 subunit K) |
| NCBI Accession ID | BX571869.1 |
| Organism | Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01) |
| Left | 123020 |
| Right | 123322 |
| Strand | - |
| Nucleotide Sequence | ATGATACCTCTTCAACATGGACTGATTTTGGCGGCAATTCTATTTGTGTTGGGCCTGACCGGGCTCATCATCCGCCGTAATCTGTTGTTTATGTTAATTGGGCTCGAAGTGATGATTAATGCTGCGGCTCTGGCTTTTGTTGTGGTAGGCAGCTATTGGGGCCAGCCAGATGGTCAAGTGATGTTTATTTTGGCTATCAGCTTGGCGGCGGCAGAGGCGAGTATTGGCTTGGCGCTGTTATTGCAGCTCTATCGTCGTCGCCAGAATCTGAATATTGATACAGTCAGTGAGATGCGCGGATGA |
| Sequence | MIPLQHGLILAAILFVLGLTGLIIRRNLLFMLIGLEVMINAAALAFVVVGSYWGQPDGQVMFILAISLAAAEASIGLALLLQLYRRRQNLNIDTVSEMRG |
| Source of smORF | Swiss-Prot |
| Function | NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. {ECO:0000255|HAMAP-Rule:MF_01456}. |
| Pubmed ID | 14528314 |
| Domain | CDD:412408 |
| Functional Category | Others |
| Uniprot ID | Q7N2J6 |
| ORF Length (Amino Acid) | 100 |
++ More..
| Conservation Analysis |
No. of Species: 294
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3593006 | 3593308 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 2 | 1755410 | 1755712 | + | NC_012962.1 | Photorhabdus asymbiotica |
| 3 | 3780509 | 3780811 | + | NZ_CP011104.1 | Photorhabdus thracensis |
| 4 | 4658751 | 4659053 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 5 | 3057590 | 3057892 | + | NZ_CP042941.1 | Atlantibacter hermannii |
| 6 | 3314853 | 3315155 | - | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 7 | 4724323 | 4724625 | + | NZ_CP045300.1 | Kosakonia arachidis |
| 8 | 1698499 | 1698801 | + | NZ_CP014007.2 | Kosakonia oryzae |
| 9 | 3479331 | 3479633 | - | NZ_CP015113.1 | Kosakonia radicincitans |
| 10 | 468615 | 468917 | - | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 11 | 4449414 | 4449716 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 12 | 1593959 | 1594261 | + | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 13 | 2224973 | 2225275 | + | NZ_CP045205.1 | Citrobacter telavivensis |
| 14 | 3604142 | 3604444 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 15 | 3675002 | 3675304 | - | NZ_LR134494.1 | Serratia quinivorans |
| 16 | 467411 | 467713 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 17 | 2956533 | 2956835 | - | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 18 | 990640 | 990942 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 19 | 3088937 | 3089239 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 20 | 2114562 | 2114864 | + | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 21 | 2941861 | 2942163 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 22 | 3678513 | 3678815 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 23 | 1330786 | 1331088 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 24 | 2933444 | 2933746 | - | NZ_LR134340.1 | Escherichia marmotae |
| 25 | 400287 | 400589 | - | NZ_CP053416.1 | Salmonella bongori |
| 26 | 4406986 | 4407288 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 27 | 2403155 | 2403457 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 28 | 2395043 | 2395345 | - | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 29 | 2391583 | 2391885 | - | NZ_AP014857.1 | Escherichia albertii |
| 30 | 494680 | 494982 | + | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 31 | 3984277 | 3984579 | + | NZ_CP044098.1 | Citrobacter portucalensis |
| 32 | 1081897 | 1082199 | - | NZ_CP033744.1 | Citrobacter freundii |
| 33 | 4618760 | 4619062 | - | NZ_LT556085.1 | Citrobacter amalonaticus |
| 34 | 2831396 | 2831698 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 35 | 3121348 | 3121650 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 36 | 1315125 | 1315427 | + | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 37 | 158237 | 158539 | + | NZ_CP038469.1 | Citrobacter tructae |
| 38 | 1330323 | 1330625 | + | NZ_LR134201.1 | Cedecea lapagei |
| 39 | 1369315 | 1369617 | + | NZ_CP023525.1 | Cedecea neteri |
| 40 | 1470835 | 1471137 | + | NZ_CP013990.1 | Leclercia adecarboxylata |
| 41 | 1198669 | 1198971 | + | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 42 | 3731581 | 3731883 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 43 | 2016608 | 2016910 | - | NZ_CP023529.1 | Lelliottia amnigena |
| 44 | 1522726 | 1523028 | + | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 45 | 4767328 | 4767630 | - | NZ_CP040428.1 | Jejubacter calystegiae |
| 46 | 1490023 | 1490325 | + | NZ_CP035129.1 | Kosakonia cowanii |
| 47 | 3276881 | 3277183 | - | NC_014500.1 | Dickeya dadantii 3937 |
| 48 | 2493997 | 2494299 | - | NZ_CP065534.1 | Lonsdalea populi |
| 49 | 757621 | 757923 | + | NZ_CP011602.1 | Phytobacter ursingii |
| 50 | 1611279 | 1611581 | + | NZ_CP043727.1 | Yersinia canariae |
| 51 | 1562477 | 1562779 | + | NZ_CP011118.1 | Yersinia enterocolitica |
| 52 | 3145596 | 3145898 | - | NZ_CP038498.1 | Pectobacterium punjabense |
| 53 | 3258947 | 3259249 | + | NZ_CP047495.1 | Pectobacterium brasiliense |
| 54 | 1588319 | 1588621 | + | NZ_CP051652.1 | Pectobacterium carotovorum |
| 55 | 3299925 | 3300227 | - | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 56 | 1698617 | 1698919 | + | NZ_CP065044.1 | Pectobacterium aroidearum |
| 57 | 3255982 | 3256284 | - | NZ_CP034938.1 | Pectobacterium odoriferum |
| 58 | 2076461 | 2076763 | - | NZ_CP017482.1 | Pectobacterium polaris |
| 59 | 2486567 | 2486869 | - | NZ_CP015749.1 | Pectobacterium parmentieri |
| 60 | 174141 | 174443 | - | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 61 | 1366379 | 1366681 | + | NZ_LT615367.1 | Dickeya aquatica |
| 62 | 1430949 | 1431251 | + | NZ_CP045845.1 | Kluyvera intermedia |
| 63 | 1367019 | 1367321 | + | NZ_AP023184.1 | Buttiauxella agrestis |
| 64 | 1328757 | 1329059 | + | NZ_CP042220.2 | Dickeya poaceiphila |
| 65 | 3084270 | 3084572 | - | NZ_CP025799.1 | Dickeya zeae |
| 66 | 2429498 | 2429800 | - | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 67 | 2681882 | 2682184 | + | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 68 | 4893750 | 4894052 | - | NZ_CP065640.1 | Serratia rubidaea |
| 69 | 730407 | 730709 | + | NZ_CP014137.1 | Brenneria goodwinii |
| 70 | 2984192 | 2984494 | - | NC_012880.1 | Musicola paradisiaca Ech703 |
| 71 | 1320117 | 1320419 | + | NZ_CP054058.1 | Scandinavium goeteborgense |
| 72 | 1330844 | 1331146 | - | NZ_CP009787.1 | Yersinia rohdei |
| 73 | 1257083 | 1257385 | - | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 74 | 3074373 | 3074675 | - | NZ_CP046293.1 | Yersinia intermedia |
| 75 | 4427757 | 4428059 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 76 | 2912996 | 2913298 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 77 | 3628790 | 3629092 | - | NZ_LT906479.1 | Serratia ficaria |
| 78 | 170003 | 170305 | + | NZ_CP067057.1 | Rahnella aceris |
| 79 | 2434123 | 2434425 | - | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 80 | 1350457 | 1350759 | + | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 81 | 2522122 | 2522424 | - | NZ_CP023567.1 | Erwinia pyrifoliae |
| 82 | 3260483 | 3260785 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 83 | 3176073 | 3176375 | - | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 84 | 1008653 | 1008955 | - | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 85 | 3233312 | 3233614 | - | NZ_AP022508.1 | Enterobacter bugandensis |
| 86 | 3261486 | 3261788 | - | NZ_CP027986.1 | Enterobacter sichuanensis |
| 87 | 3256802 | 3257104 | - | NZ_CP017184.1 | Enterobacter roggenkampii |
| 88 | 3219510 | 3219812 | - | NC_015968.1 | Enterobacter soli |
| 89 | 4026649 | 4026951 | + | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 90 | 3372342 | 3372644 | - | NZ_CP009756.1 | Enterobacter cloacae |
| 91 | 2519355 | 2519657 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 92 | 3541233 | 3541535 | - | NZ_CP043318.1 | Enterobacter chengduensis |
| 93 | 1502000 | 1502302 | + | NZ_CP071320.1 | Serratia ureilytica |
| 94 | 3598277 | 3598579 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 95 | 249634 | 249936 | + | NZ_CP045769.1 | Enterobacter cancerogenus |
| 96 | 2844184 | 2844486 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 97 | 2584192 | 2584494 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 98 | 1610005 | 1610307 | + | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 99 | 4659596 | 4659898 | - | NZ_CP007230.1 | Yersinia similis |
| 100 | 2912502 | 2912804 | + | NZ_CP019706.1 | Pantoea alhagi |
| 101 | 3015501 | 3015803 | - | NZ_CP050150.1 | Hafnia alvei |
| 102 | 5764668 | 5764970 | - | NZ_CP011254.1 | Serratia fonticola |
| 103 | 1439663 | 1439965 | + | NZ_LR134475.1 | Klebsiella aerogenes |
| 104 | 170605 | 170907 | - | NZ_CP026047.1 | Raoultella planticola |
| 105 | 1504377 | 1504679 | + | NZ_CP046672.1 | Raoultella ornithinolytica |
| 106 | 1102402 | 1102704 | + | NZ_CP032487.1 | Yersinia hibernica |
| 107 | 1523006 | 1523308 | + | NZ_CP054254.1 | Klebsiella variicola |
| 108 | 1575541 | 1575843 | + | NZ_CP050508.1 | Raoultella terrigena |
| 109 | 1021029 | 1021331 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 110 | 1702385 | 1702687 | + | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 111 | 1513304 | 1513606 | + | NZ_CP041247.1 | Raoultella electrica |
| 112 | 1473681 | 1473983 | + | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 113 | 4712220 | 4712522 | - | NZ_CP020388.1 | Pluralibacter gergoviae |
| 114 | 3772630 | 3772932 | - | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 115 | 409266 | 409568 | + | NZ_CP016176.1 | Xenorhabdus hominickii |
| 116 | 1704146 | 1704448 | + | NZ_CP060111.1 | Klebsiella michiganensis |
| 117 | 2859579 | 2859881 | + | NZ_CP023706.1 | Edwardsiella tarda |
| 118 | 1187502 | 1187804 | + | NZ_CP016043.1 | Edwardsiella hoshinae |
| 119 | 1757220 | 1757522 | + | NZ_CP036175.1 | Klebsiella huaxiensis |
| 120 | 1878550 | 1878852 | - | NC_010554.1 | Proteus mirabilis HI4320 |
| 121 | 105543 | 105845 | - | NZ_CP026364.1 | Proteus hauseri |
| 122 | 986223 | 986525 | - | NZ_CP060401.1 | Xenorhabdus nematophila |
| 123 | 2742045 | 2742347 | - | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 124 | 2565690 | 2565992 | - | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 125 | 377954 | 378256 | - | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 126 | 2459921 | 2460223 | - | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 127 | 2862629 | 2862931 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 128 | 1222760 | 1223062 | + | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 129 | 2545205 | 2545507 | + | NZ_CP023536.1 | Providencia alcalifaciens |
| 130 | 1285376 | 1285678 | + | NZ_LS483470.1 | Leminorella richardii |
| 131 | 2649341 | 2649643 | - | NZ_LR134531.1 | Pragia fontium |
| 132 | 2753530 | 2753832 | - | NZ_CP034148.1 | Pantoea agglomerans |
| 133 | 1310783 | 1311085 | + | NZ_CP045720.1 | Pantoea eucalypti |
| 134 | 1254494 | 1254796 | + | NZ_CP038853.1 | Pantoea vagans |
| 135 | 2669925 | 2670227 | - | NZ_LN907827.1 | Erwinia gerundensis |
| 136 | 2948616 | 2948918 | - | NZ_CP061511.1 | Mixta calida |
| 137 | 3112197 | 3112499 | - | NZ_CP026377.1 | Mixta gaviniae |
| 138 | 1386841 | 1387143 | - | NZ_CP049115.1 | Pantoea stewartii |
| 139 | 2242634 | 2242936 | - | NZ_CP028271.1 | Mixta intestinalis |
| 140 | 3446607 | 3446909 | - | NC_014306.1 | Erwinia billingiae Eb661 |
| 141 | 2878027 | 2878329 | - | NZ_CP015581.1 | Tatumella citrea |
| 142 | 1504108 | 1504410 | + | NC_017554.1 | Pantoea ananatis PA13 |
| 143 | 1781705 | 1782007 | + | NZ_LS483422.1 | Providencia heimbachae |
| 144 | 3639625 | 3639891 | + | NZ_CP047698.1 | Pseudomonas knackmussii |
| 145 | 1842398 | 1842700 | + | NZ_CP048796.1 | Providencia vermicola |
| 146 | 2992548 | 2992856 | + | NC_002516.2 | Pseudomonas aeruginosa PAO1 |
| 147 | 2394344 | 2394610 | + | NZ_CP011835.1 | Azotobacter chroococcum |
| 148 | 1295458 | 1295760 | + | NZ_CP029185.2 | Limnobaculum parvum |
| 149 | 1372726 | 1373028 | - | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 150 | 3243296 | 3243598 | - | NZ_CP029736.1 | Providencia rettgeri |
| 151 | 2065342 | 2065644 | - | NZ_CP031123.2 | Providencia huaxiensis |
| 152 | 3812040 | 3812348 | + | NZ_CP068034.2 | Pseudomonas syringae |
| 153 | 4329196 | 4329489 | + | NZ_CP018420.1 | Pseudomonas veronii |
| 154 | 3163555 | 3163800 | - | NZ_CP048833.1 | Pseudomonas multiresinivorans |
| 155 | 4344417 | 4344698 | + | NZ_CP061079.1 | Pseudomonas chlororaphis |
| 156 | 4056638 | 4056931 | + | NZ_CP012400.2 | Pseudomonas yamanorum |
| 157 | 4290823 | 4291089 | + | NZ_CP014158.1 | Pseudomonas citronellolis |
| 158 | 3650715 | 3651008 | + | NZ_CP010896.1 | Pseudomonas simiae |
| 159 | 2869020 | 2869328 | - | NZ_AP014862.1 | Pseudomonas furukawaii |
| 160 | 541450 | 541743 | - | NZ_CP040449.1 | Aeromonas simiae |
| 161 | 3372985 | 3373251 | + | NZ_CP043311.1 | Pseudomonas lalkuanensis |
| 162 | 3719852 | 3720145 | + | NZ_CP054205.1 | Pseudomonas rhodesiae |
| 163 | 3535010 | 3535303 | + | NZ_CP027723.1 | Pseudomonas orientalis |
| 164 | 4452352 | 4452645 | + | NZ_LS999205.1 | Pseudomonas protegens CHA0 |
| 165 | 3694868 | 3695161 | + | NZ_CP023272.1 | Pseudomonas lurida |
| 166 | 3926466 | 3926759 | + | NZ_CP027756.1 | Pseudomonas synxantha |
| 167 | 4450131 | 4450439 | + | NZ_CP014870.1 | Pseudomonas silesiensis |
| 168 | 1340445 | 1340708 | + | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 169 | 3813592 | 3813900 | + | NC_004578.1 | Pseudomonas syringae pv. tomato str. DC3000 |
| 170 | 2385610 | 2385918 | - | NZ_CP067022.1 | Pseudomonas cannabina pv. alisalensis |
| 171 | 3717022 | 3717330 | + | NZ_CP042804.1 | Pseudomonas amygdali pv. tabaci str. ATCC 11528 |
| 172 | 4232294 | 4232602 | + | NZ_CP035088.1 | Pseudomonas viciae |
| 173 | 2045495 | 2045761 | - | NZ_CP007039.1 | Pseudomonas cichorii JBC1 |
| 174 | 3808891 | 3809199 | + | NZ_CP046621.1 | Pseudomonas alkylphenolica |
| 175 | 2171482 | 2171790 | - | NZ_CP071706.1 | Pseudomonas donghuensis |
| 176 | 4503399 | 4503692 | + | NZ_CP051487.1 | Pseudomonas umsongensis |
| 177 | 2825857 | 2826165 | + | NZ_CP009365.1 | Pseudomonas soli |
| 178 | 6553436 | 6553744 | - | NZ_CP048810.1 | Pseudomonas bijieensis |
| 179 | 4257992 | 4258300 | + | NZ_CP034725.1 | Pseudomonas brassicacearum |
| 180 | 2463793 | 2464101 | - | NZ_CP049044.1 | Pseudomonas psychrophila |
| 181 | 2321417 | 2321725 | - | NZ_CP070503.1 | Pseudomonas atacamensis |
| 182 | 3954974 | 3955282 | + | NZ_CP029608.1 | Pseudomonas kribbensis |
| 183 | 5056285 | 5056593 | + | NZ_CP014205.2 | Pseudomonas glycinae |
| 184 | 4143058 | 4143366 | + | NZ_CP062253.1 | Pseudomonas gozinkensis |
| 185 | 4178390 | 4178698 | + | NZ_CP062252.1 | Pseudomonas allokribbensis |
| 186 | 5399411 | 5399719 | - | NZ_CP031146.1 | Pseudomonas plecoglossicida |
| 187 | 3936361 | 3936669 | + | NZ_CP022562.1 | Pseudomonas monteilii |
| 188 | 1892388 | 1892696 | - | NC_021505.1 | Pseudomonas putida NBRC 14164 |
| 189 | 1755006 | 1755299 | - | NZ_CP062158.2 | Pseudomonas lundensis |
| 190 | 990903 | 991211 | - | NZ_CP012676.1 | Pseudomonas versuta |
| 191 | 2568996 | 2569304 | + | NZ_CP009533.1 | Pseudomonas rhizosphaerae |
| 192 | 2358535 | 2358843 | - | NZ_AP022642.1 | Pseudomonas otitidis |
| 193 | 2022606 | 2022914 | - | NZ_CP024159.1 | Pseudomonas mosselii |
| 194 | 3770145 | 3770453 | + | NC_008027.1 | Pseudomonas entomophila L48 |
| 195 | 1413811 | 1414119 | + | NZ_CP014262.1 | Pseudomonas corrugata |
| 196 | 2484322 | 2484585 | + | NZ_LR215729.2 | Pseudomonas marincola |
| 197 | 2053923 | 2054168 | - | NZ_CP056030.1 | Pseudomonas eucalypticola |
| 198 | 3478803 | 3479048 | - | NC_007963.1 | Chromohalobacter salexigens DSM 3043 |
| 199 | 1521228 | 1521530 | + | NZ_CP006569.1 | Sodalis praecaptivus |
| 200 | 2795503 | 2795784 | - | NZ_CP049801.1 | Acinetobacter shaoyimingii |
| 201 | 719677 | 719958 | + | NZ_CP049916.1 | Acinetobacter lanii |
| 202 | 2909566 | 2909829 | + | NZ_CP060009.1 | Pseudomonas sediminis |
| 203 | 4645927 | 4646193 | - | NZ_CP070505.1 | Pseudomonas toyotomiensis |
| 204 | 2761203 | 2761481 | - | NZ_CP031222.1 | Aquirhabdus parva |
| 205 | 2692067 | 2692348 | - | NZ_CP030880.1 | Acinetobacter haemolyticus |
| 206 | 2940419 | 2940685 | + | NC_012560.1 | Azotobacter vinelandii DJ |
| 207 | 919082 | 919363 | + | NZ_AP014630.1 | Acinetobacter guillouiae |
| 208 | 2690907 | 2691173 | + | NZ_CP013124.1 | Pseudomonas mendocina S5.2 |
| 209 | 2293916 | 2294197 | - | NZ_CP041970.1 | Acinetobacter dispersus |
| 210 | 478070 | 478336 | + | NZ_CP045302.1 | Azotobacter salinestris |
| 211 | 1597503 | 1597757 | + | NZ_CP021323.1 | Kushneria konosiri |
| 212 | 3377693 | 3377974 | - | NC_014259.1 | Acinetobacter oleivorans DR1 |
| 213 | 755967 | 756248 | + | NZ_CP024632.1 | Acinetobacter junii |
| 214 | 1647550 | 1647831 | - | NZ_CP021358.1 | Kushneria marisflavi |
| 215 | 1151103 | 1151384 | - | NZ_CP070518.1 | Acinetobacter calcoaceticus |
| 216 | 831203 | 831511 | + | NZ_CP029397.2 | Acinetobacter defluvii |
| 217 | 1287834 | 1288115 | - | NZ_CP040105.1 | Acinetobacter nosocomialis M2 |
| 218 | 32958 | 33239 | + | NC_016603.1 | Acinetobacter pittii PHEA-2 |
| 219 | 3176772 | 3177053 | - | NZ_CP053391.1 | Acinetobacter lactucae |
| 220 | 3197287 | 3197568 | - | NZ_CP015121.1 | Acinetobacter baumannii |
| 221 | 3308183 | 3308464 | - | NZ_CP065820.1 | Acinetobacter seifertii |
| 222 | 618143 | 618424 | + | NZ_CP016895.1 | Acinetobacter larvae |
| 223 | 724050 | 724331 | + | NC_005966.1 | Acinetobacter baylyi ADP1 |
| 224 | 2498846 | 2499112 | - | NZ_CP068551.1 | Pseudomonas khazarica |
| 225 | 777512 | 777814 | - | NZ_CP012678.1 | Psychrobacter urativorans |
| 226 | 1968069 | 1968317 | - | NZ_AP022188.1 | Aeromonas media |
| 227 | 2898079 | 2898327 | + | NC_012691.1 | Tolumonas auensis DSM 9187 |
| 228 | 858746 | 859039 | - | NZ_CP051883.1 | Aeromonas salmonicida |
| 229 | 1943117 | 1943383 | - | NZ_CP050851.1 | Aeromonas hydrophila |
| 230 | 72557 | 72838 | - | NZ_CP012808.1 | Acinetobacter equi |
| 231 | 2125062 | 2125370 | - | NZ_CP045650.1 | Acinetobacter wanghuae |
| 232 | 2744030 | 2744329 | - | NZ_AP018933.1 | Zymobacter palmae |
| 233 | 2407798 | 2408079 | - | NZ_CP071766.1 | Acinetobacter towneri |
| 234 | 853363 | 853644 | + | NZ_CP035934.2 | Acinetobacter cumulans |
| 235 | 2263800 | 2264099 | + | NZ_CP014234.1 | Moraxella osloensis |
| 236 | 1333053 | 1333301 | + | NZ_CP044060.1 | Aeromonas veronii |
| 237 | 736646 | 736894 | - | NZ_CP065745.1 | Aeromonas allosaccharophila |
| 238 | 709732 | 710013 | + | NZ_CP044483.1 | Acinetobacter schindleri |
| 239 | 4300147 | 4300404 | - | NZ_CP013106.1 | Halomonas huangheensis |
| 240 | 127945 | 128211 | + | NZ_CP021435.1 | Halomonas beimenensis |
| 241 | 2574166 | 2574459 | + | NZ_LR134376.1 | Aeromonas encheleia |
| 242 | 2720211 | 2720492 | - | NZ_CP032134.1 | Acinetobacter chinensis |
| 243 | 170548 | 170850 | + | NC_004545.1 | Buchnera aphidicola str. Bp (Baizongia pistaciae) |
| 244 | 5484731 | 5484979 | - | NC_018025.1 | Desulfomonile tiedjei DSM 6799 |
| 245 | 2660927 | 2661193 | - | NZ_CP043042.1 | Marinobacter fonticola |
| 246 | 1048223 | 1048489 | + | NZ_CP042382.1 | Pistricoccus aurantiacus |
| 247 | 1436264 | 1436521 | - | NC_002977.6 | Methylococcus capsulatus str. Bath |
| 248 | 88099 | 88356 | + | NZ_AP018795.1 | Acidithiobacillus ferridurans |
| 249 | 2915581 | 2915838 | + | NZ_CP055153.1 | Adhaeribacter radiodurans |
| 250 | 4787694 | 4787960 | + | NZ_AP017928.1 | Methylocaldum marinum |
| 251 | 3224610 | 3224903 | - | NZ_CP020931.1 | Marinobacter salarius |
| 252 | 288952 | 289209 | + | NZ_CP040896.1 | Hymenobacter jejuensis |
| 253 | 976340 | 976639 | + | NZ_CP065728.1 | Moraxella nonliquefaciens |
| 254 | 724997 | 725296 | + | NC_014147.1 | Moraxella catarrhalis BBH18 |
| 255 | 5313796 | 5314050 | + | NZ_CP032382.1 | Chryseolinea soli |
| 256 | 143567 | 143812 | + | NZ_CP043420.1 | Kushneria phosphatilytica |
| 257 | 2254139 | 2254447 | - | NZ_CP053708.1 | Lichenicola cladoniae |
| 258 | 2609089 | 2609379 | - | NZ_CP017689.1 | Thalassotalea crassostreae |
| 259 | 841037 | 841285 | - | NZ_CP012371.1 | Nitrosospira briensis C-128 |
| 260 | 812776 | 813078 | + | NZ_CP014945.1 | Psychrobacter alimentarius |
| 261 | 3729694 | 3729957 | - | NC_016609.1 | Niastella koreensis GR20-10 |
| 262 | 2629528 | 2629797 | + | NZ_CP011801.1 | Nitrospira moscoviensis |
| 263 | 977202 | 977459 | - | NZ_CP021235.1 | Pontibacter actiniarum |
| 264 | 708863 | 709156 | + | NZ_CP047984.1 | Pontibacter russatus |
| 265 | 3658804 | 3659094 | + | NC_017770.1 | Solitalea canadensis DSM 3403 |
| 266 | 706431 | 706706 | + | NC_007204.1 | Psychrobacter arcticus 273-4 |
| 267 | 694808 | 695083 | + | NC_007969.1 | Psychrobacter cryohalolentis K5 |
| 268 | 1141490 | 1141768 | - | NZ_LR884459.1 | Psychrobacter arenosus |
| 269 | 510033 | 510341 | - | NZ_CP048106.1 | Pontibacter pudoricolor |
| 270 | 3838808 | 3839101 | - | NZ_CP014766.1 | Pontibacter akesuensis |
| 271 | 3204135 | 3204428 | - | NZ_CP009621.1 | Pontibacter korlensis |
| 272 | 571224 | 571508 | + | NZ_CP020465.1 | Cognaticolwellia beringensis |
| 273 | 2704563 | 2704826 | + | NZ_CP042806.1 | Terriglobus albidus |
| 274 | 1183077 | 1183325 | + | NC_007614.1 | Nitrosospira multiformis ATCC 25196 |
| 275 | 4801113 | 4801421 | - | NC_013132.1 | Chitinophaga pinensis DSM 2588 |
| 276 | 4801941 | 4802204 | - | NZ_CP018099.1 | Caldithrix abyssi DSM 13497 |
| 277 | 2671013 | 2671315 | - | NZ_CP007445.1 | Gilliamella apicola |
| 278 | 379942 | 380241 | + | NZ_CP015839.1 | Marinobacterium aestuarii |
| 279 | 1791652 | 1791951 | - | NZ_CP030241.1 | Moraxella bovis |
| 280 | 1498648 | 1498947 | - | NZ_CP011158.1 | Moraxella ovis |
| 281 | 1377670 | 1377969 | - | NZ_CP011381.2 | Moraxella bovoculi |
| 282 | 113767 | 114069 | + | NZ_CP009056.1 | Frischella perrara |
| 283 | 384563 | 384847 | - | NC_009483.1 | Geobacter uraniireducens Rf4 |
| 284 | 1916360 | 1916608 | - | NZ_LR134343.1 | Moraxella cuniculi |
| 285 | 3044740 | 3044985 | + | NZ_CP038033.1 | Nitrosococcus wardiae |
| 286 | 888356 | 888664 | + | NC_015186.1 | Acidiphilium multivorum AIU301 |
| 287 | 2686525 | 2686806 | + | NZ_CP014864.1 | Microbulbifer thermotolerans |
| 288 | 2149127 | 2149459 | - | NZ_CP014143.1 | Microbulbifer aggregans |
| 289 | 1220523 | 1220834 | - | NC_007484.1 | Nitrosococcus oceani ATCC 19707 |
| 290 | 2721454 | 2721702 | - | NZ_AP014690.1 | Asaia bogorensis NBRC 16594 |
| 291 | 3312762 | 3313031 | - | NZ_LN606600.1 | Acetobacter senegalensis |
| 292 | 835038 | 835325 | - | NZ_CP029822.1 | Entomomonas moraniae |
| 293 | 2102105 | 2102416 | + | NC_014315.1 | Nitrosococcus watsonii C-113 |
| 294 | 2209902 | 2210147 | - | NC_013960.1 | Nitrosococcus halophilus Nc 4 |
| 295 | 2761734 | 2761976 | + | NZ_CP014681.1 | Kozakia baliensis |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_005126.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00361.22 | 1.0 | 294 | 1906.5 | same-strand | Proton-conducting membrane transporter |
| 2 | PF00662.22 | 1.0 | 294 | -3 | same-strand | NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus |
| 3 | PF00499.22 | 1.0 | 293 | -3.0 | same-strand | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 |
| 4 | PF00037.29 | 0.99 | 291 | 562.0 | same-strand | 4Fe-4S binding domain |
| 5 | PF12838.9 | 0.99 | 291 | 562.0 | same-strand | 4Fe-4S dicluster domain |
| 6 | PF13237.8 | 0.99 | 291 | 562.0 | same-strand | 4Fe-4S dicluster domain |
| 7 | PF13187.8 | 0.99 | 291 | 562.0 | same-strand | 4Fe-4S dicluster domain |
| 8 | PF00146.23 | 0.99 | 292 | 1119 | same-strand | NADH dehydrogenase |
| 9 | PF10588.11 | 0.99 | 291 | 2094.0 | same-strand | NADH-ubiquinone oxidoreductase-G iron-sulfur binding region |
| 10 | PF13510.8 | 0.98 | 289 | 2094.0 | same-strand | 2Fe-2S iron-sulfur cluster binding domain |
| 11 | PF04879.18 | 0.99 | 292 | 2094 | same-strand | Molybdopterin oxidoreductase Fe4S4 domain |
| 12 | PF00111.29 | 0.96 | 281 | 2094.0 | same-strand | 2Fe-2S iron-sulfur cluster binding domain |
| 13 | PF01512.19 | 0.98 | 287 | 4921.0 | same-strand | Respiratory-chain NADH dehydrogenase 51 Kd subunit |
| 14 | PF10589.11 | 0.98 | 287 | 4921.0 | same-strand | NADH-ubiquinone oxidoreductase-F iron-sulfur binding region |
| 15 | PF10531.11 | 0.7 | 205 | 4908 | same-strand | SLBB domain |
++ More..