Result : Q73TF1
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 30S ribosomal protein S18 2 |
| NCBI Accession ID | AE016958.1 |
| Organism | Mycolicibacterium paratuberculosis (strain ATCC BAA-968 / K-10) (Mycobacterium paratuberculosis) |
| Left | 4212759 |
| Right | 4213025 |
| Strand | - |
| Nucleotide Sequence | ATGCCCAAGAAACCTGCGCGGACGCGCAGGCCGGCTCCTTTGGCCGGCCGGGCGCGTAAGAAGAATCTTCTCGACAGCCTCGGGTTGCGCACCGTGGACTACAAGGACACCGCGACGCTGCGGGTGTTCATCTCCGAACGCGGCAAGATCCGTTCCCGTCAGGTCACCGGCCTGTCCGTCCAGCAACAACGACAGGTCGCGACGGCGATCAAGAACGCCCGCGAAATGGCGCTTCTTCCATATCCGGGGCAAGGCATCAAGCCGTAA |
| Sequence | MPKKPARTRRPAPLAGRARKKNLLDSLGLRTVDYKDTATLRVFISERGKIRSRQVTGLSVQQQRQVATAIKNAREMALLPYPGQGIKP |
| Source of smORF | Swiss-Prot |
| Function | Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit. {ECO:0000255|HAMAP-Rule:MF_00270}. |
| Pubmed ID | 16116077 |
| Domain | CDD:412341 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | Q73TF1 |
| ORF Length (Amino Acid) | 88 |
++ More..
| Conservation Analysis |
No. of Species: 178
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 5011759 | 5012022 | + | NC_016946.1 | Mycobacterium intracellulare ATCC 13950 |
| 2 | 76079 | 76333 | + | NC_016946.1 | Mycobacterium intracellulare ATCC 13950 |
| 3 | 3761988 | 3762251 | + | NZ_AP022614.1 | Mycobacterium parmense |
| 4 | 4256879 | 4257133 | + | NZ_AP022614.1 | Mycobacterium parmense |
| 5 | 4853762 | 4854025 | + | NZ_CP023147.1 | Mycobacterium marseillense |
| 6 | 69691 | 69945 | + | NZ_CP023147.1 | Mycobacterium marseillense |
| 7 | 76065 | 76319 | + | NC_016948.1 | Mycobacterium paraintracellulare |
| 8 | 2067210 | 2067455 | - | NZ_AP022600.1 | Mycolicibacterium tokaiense |
| 9 | 1693387 | 1693647 | - | NZ_AP022600.1 | Mycolicibacterium tokaiense |
| 10 | 5720665 | 5720928 | + | NZ_AP018410.1 | Mycobacterium pseudoshottsii JCM 15466 |
| 11 | 69570 | 69824 | + | NZ_AP018410.1 | Mycobacterium pseudoshottsii JCM 15466 |
| 12 | 1782635 | 1782898 | - | NZ_CP058277.1 | Mycobacterium marinum |
| 13 | 1555278 | 1555532 | + | NZ_CP058277.1 | Mycobacterium marinum |
| 14 | 2114194 | 2114448 | - | NZ_AP022615.1 | Mycobacterium heidelbergense |
| 15 | 1260998 | 1261261 | - | NZ_AP022572.1 | Mycobacterium shottsii |
| 16 | 686294 | 686548 | - | NZ_AP022572.1 | Mycobacterium shottsii |
| 17 | 4091326 | 4091583 | - | NZ_AP022573.1 | Mycobacterium saskatchewanense |
| 18 | 3628532 | 3628789 | + | NZ_AP022573.1 | Mycobacterium saskatchewanense |
| 19 | 4943858 | 4944109 | - | NZ_AP022563.1 | Mycolicibacterium duvalii |
| 20 | 4515867 | 4516121 | + | NZ_AP022563.1 | Mycolicibacterium duvalii |
| 21 | 1199233 | 1199493 | - | NZ_AP022596.1 | Mycolicibacterium helvum |
| 22 | 2419114 | 2419368 | + | NZ_AP022596.1 | Mycolicibacterium helvum |
| 23 | 3635952 | 3636218 | + | NZ_AP022595.1 | Mycolicibacterium sarraceniae |
| 24 | 1477547 | 1477801 | - | NZ_AP022595.1 | Mycolicibacterium sarraceniae |
| 25 | 3987837 | 3988088 | - | NZ_AP022616.1 | Mycolicibacterium phocaicum |
| 26 | 3814750 | 3815004 | + | NZ_AP022616.1 | Mycolicibacterium phocaicum |
| 27 | 2406372 | 2406593 | + | NZ_AP022568.1 | Mycobacterium simiae |
| 28 | 2580012 | 2580266 | - | NZ_AP022568.1 | Mycobacterium simiae |
| 29 | 4592311 | 4592559 | - | NZ_AP022561.1 | Mycolicibacterium aichiense |
| 30 | 5893191 | 5893445 | + | NZ_AP022561.1 | Mycolicibacterium aichiense |
| 31 | 2811078 | 2811332 | - | NZ_AP022603.1 | Mycolicibacterium fallax |
| 32 | 534985 | 535245 | - | NZ_AP022570.1 | Mycolicibacterium poriferae |
| 33 | 5873827 | 5874078 | + | NC_008726.1 | Mycolicibacterium vanbaalenii PYR-1 |
| 34 | 1053472 | 1053729 | - | NZ_CP043474.1 | Mycobacterium grossiae |
| 35 | 1386987 | 1387244 | + | NZ_CP043474.1 | Mycobacterium grossiae |
| 36 | 203857 | 204129 | - | NZ_LR130759.1 | Mycobacterium basiliense |
| 37 | 69713 | 69967 | + | NZ_LR130759.1 | Mycobacterium basiliense |
| 38 | 1811933 | 1812187 | - | NZ_AP022589.1 | Mycolicibacter minnesotensis |
| 39 | 1526896 | 1527156 | + | NZ_AP022598.1 | Mycolicibacterium parafortuitum |
| 40 | 290972 | 291220 | - | NZ_CP010271.1 | Mycobacteroides saopaulense |
| 41 | 4589872 | 4590126 | - | NZ_CP010271.1 | Mycobacteroides saopaulense |
| 42 | 3446454 | 3446705 | + | NZ_AP022576.1 | Mycobacterium florentinum |
| 43 | 3598922 | 3599176 | - | NZ_AP022576.1 | Mycobacterium florentinum |
| 44 | 3229050 | 3229283 | + | NZ_AP022577.1 | Mycolicibacterium aubagnense |
| 45 | 3399855 | 3400109 | - | NZ_AP022577.1 | Mycolicibacterium aubagnense |
| 46 | 606909 | 607163 | + | NZ_AP022618.1 | Mycolicibacterium insubricum |
| 47 | 5864512 | 5864760 | + | NZ_CP062008.1 | Mycolicibacterium mucogenicum DSM 44124 |
| 48 | 6043106 | 6043360 | - | NZ_CP062008.1 | Mycolicibacterium mucogenicum DSM 44124 |
| 49 | 3613560 | 3613823 | + | NZ_AP022593.1 | Mycolicibacterium arabiense |
| 50 | 4716486 | 4716740 | - | NZ_CP024633.1 | Mycobacteroides salmoniphilum |
| 51 | 285191 | 285436 | - | NZ_AP018165.1 | [Mycobacterium] stephanolepidis |
| 52 | 4932466 | 4932720 | - | NZ_AP018165.1 | [Mycobacterium] stephanolepidis |
| 53 | 217748 | 217996 | - | NZ_AP018164.1 | Mycobacterium shigaense |
| 54 | 81004 | 81258 | + | NZ_AP018164.1 | Mycobacterium shigaense |
| 55 | 318899 | 319144 | - | NZ_CP007220.1 | Mycobacteroides chelonae CCUG 47445 |
| 56 | 4970173 | 4970427 | - | NZ_CP007220.1 | Mycobacteroides chelonae CCUG 47445 |
| 57 | 3782702 | 3782959 | + | NZ_AP022587.1 | Mycobacterium stomatepiae |
| 58 | 3934129 | 3934383 | - | NZ_AP022587.1 | Mycobacterium stomatepiae |
| 59 | 315053 | 315301 | - | NZ_CP014955.1 | Mycobacteroides abscessus |
| 60 | 5012996 | 5013250 | - | NZ_CP014955.1 | Mycobacteroides abscessus |
| 61 | 429438 | 429686 | - | NZ_CP011530.1 | Mycobacteroides immunogenum |
| 62 | 5516262 | 5516516 | - | NZ_CP011530.1 | Mycobacteroides immunogenum |
| 63 | 2569521 | 2569775 | - | NZ_LR134355.1 | Mycolicibacterium chitae |
| 64 | 5412886 | 5413146 | - | NZ_LR134355.1 | Mycolicibacterium chitae |
| 65 | 59122 | 59376 | + | NC_000962.3 | Mycobacterium tuberculosis H37Rv |
| 66 | 6936526 | 6936780 | - | NZ_LN831039.1 | Mycolicibacterium smegmatis |
| 67 | 3930696 | 3930950 | - | NZ_AP022601.1 | Mycobacterium gallinarum |
| 68 | 4333444 | 4333707 | - | NZ_AP022601.1 | Mycobacterium gallinarum |
| 69 | 1340798 | 1341052 | - | NZ_CP012150.1 | Mycobacterium goodii |
| 70 | 585198 | 585446 | - | NC_012704.1 | Corynebacterium kroppenstedtii DSM 44385 |
| 71 | 3476715 | 3476930 | - | NZ_AP022620.1 | Mycolicibacterium anyangense |
| 72 | 4079322 | 4079579 | + | NZ_AP022620.1 | Mycolicibacterium anyangense |
| 73 | 2045254 | 2045472 | + | NZ_LR698967.1 | Corynebacterium ammoniagenes |
| 74 | 750696 | 750914 | - | NZ_CP019688.1 | Corynebacterium glaucum |
| 75 | 694955 | 695173 | + | NZ_CP014635.1 | Corynebacterium simulans |
| 76 | 1973239 | 1973457 | + | NZ_CP009251.1 | Corynebacterium stationis |
| 77 | 5535211 | 5535474 | - | NZ_CP011269.1 | Mycolicibacterium fortuitum |
| 78 | 6197914 | 6198174 | - | NZ_CP011269.1 | Mycolicibacterium fortuitum |
| 79 | 670501 | 670734 | - | NC_013093.1 | Actinosynnema mirum DSM 43827 |
| 80 | 4434698 | 4434952 | + | NZ_AP022586.1 | Mycolicibacterium litorale |
| 81 | 704706 | 704954 | - | NZ_CP009215.1 | Corynebacterium ureicelerivorans |
| 82 | 4623845 | 4624102 | + | NZ_AP023172.1 | Rhodococcus qingshengii |
| 83 | 883497 | 883715 | - | NZ_CP009246.1 | Corynebacterium flavescens |
| 84 | 801663 | 801881 | - | NZ_CP039247.1 | Corynebacterium endometrii |
| 85 | 5715984 | 5716217 | + | NZ_CP034539.1 | Streptomyces cyaneochromogenes |
| 86 | 4426720 | 4426971 | + | NZ_CP022521.1 | Actinoalloteichus hoggarensis |
| 87 | 4382356 | 4382595 | + | NZ_CP016174.1 | Amycolatopsis orientalis |
| 88 | 136434 | 136673 | + | NC_013947.1 | Stackebrandtia nassauensis DSM 44728 |
| 89 | 1249766 | 1250041 | - | NZ_AP022610.1 | Mycolicibacterium madagascariense |
| 90 | 51388 | 51654 | + | NZ_AP022610.1 | Mycolicibacterium madagascariense |
| 91 | 1818247 | 1818498 | + | NZ_CP026746.1 | Nocardia cyriacigeorgica |
| 92 | 1670876 | 1671121 | + | NZ_LT906473.1 | Corynebacterium cystitidis |
| 93 | 900565 | 900783 | - | NC_012590.1 | Corynebacterium aurimucosum ATCC 700975 |
| 94 | 954248 | 954466 | - | NZ_CP010827.1 | Corynebacterium singulare |
| 95 | 1831884 | 1832102 | + | NZ_LS483460.1 | Corynebacterium minutissimum |
| 96 | 3643284 | 3643538 | + | NC_015564.1 | Hoyosella subflava DQS3-9A1 |
| 97 | 6802955 | 6803203 | + | NZ_LR134352.1 | Nocardia asteroides |
| 98 | 632180 | 632431 | + | NZ_LR134352.1 | Nocardia asteroides |
| 99 | 553736 | 553990 | - | NC_008278.1 | Frankia alni ACN14a |
| 100 | 3451298 | 3451552 | + | NZ_AP022567.1 | Mycolicibacterium mageritense |
| 101 | 2624204 | 2624464 | + | NZ_AP022567.1 | Mycolicibacterium mageritense |
| 102 | 9514922 | 9515152 | - | NZ_CP063373.1 | Streptomyces ferrugineus |
| 103 | 59174 | 59428 | + | NC_015848.1 | Mycobacterium canettii CIPT 140010059 |
| 104 | 6386322 | 6386573 | + | NZ_CP018082.1 | Nocardia mangyaensis |
| 105 | 7158430 | 7158681 | + | NZ_CP018082.1 | Nocardia mangyaensis |
| 106 | 2127006 | 2127224 | + | NZ_CP006841.1 | Corynebacterium lactis RW2-5 |
| 107 | 3690401 | 3690661 | + | NZ_AP022565.1 | Mycolicibacterium alvei |
| 108 | 51506 | 51763 | + | NZ_CP020809.1 | Mycobacterium dioxanotrophicus |
| 109 | 3659225 | 3659467 | - | NZ_CP051486.1 | Streptomyces pratensis |
| 110 | 507579 | 507821 | - | NZ_CP022208.1 | Rhodococcus pyridinivorans |
| 111 | 2486947 | 2487186 | - | NZ_CP042260.1 | Glutamicibacter halophytocola |
| 112 | 1255056 | 1255316 | - | NZ_AP022579.1 | Mycolicibacterium boenickei |
| 113 | 1080710 | 1080961 | - | NZ_AP017369.1 | Corynebacterium suranareeae |
| 114 | 2473983 | 2474219 | - | NZ_CP061539.1 | Rothia terrae |
| 115 | 4447488 | 4447718 | - | NZ_CP023689.1 | Streptomyces chartreusis |
| 116 | 2794415 | 2794651 | - | NZ_CP035504.1 | Kocuria indica |
| 117 | 1980553 | 1980813 | + | NZ_CP035806.1 | Leucobacter triazinivorans |
| 118 | 1892771 | 1893010 | + | NZ_CP018135.1 | Neomicrococcus aestuarii |
| 119 | 1004203 | 1004454 | - | NC_004369.1 | Corynebacterium efficiens YS-314 |
| 120 | 7010375 | 7010596 | + | NZ_AP023355.1 | Actinocatenispora thailandica |
| 121 | 3254739 | 3255002 | - | NZ_CP033724.1 | Clavibacter michiganensis subsp. michiganensis |
| 122 | 890450 | 890701 | - | NC_020506.1 | Corynebacterium callunae DSM 20147 |
| 123 | 897012 | 897263 | - | NZ_CP009220.1 | Corynebacterium deserti GIMN1.010 |
| 124 | 4182041 | 4182274 | + | NZ_AP023439.1 | Streptomyces tuirus |
| 125 | 908772 | 909023 | - | NZ_CP015622.1 | Corynebacterium crudilactis |
| 126 | 6954455 | 6954691 | + | NZ_CP029196.1 | Streptomyces venezuelae |
| 127 | 4039348 | 4039611 | - | NZ_CP020715.1 | Cnuibacter physcomitrellae |
| 128 | 1141592 | 1141840 | - | NZ_CP011786.1 | Bifidobacterium actinocoloniiforme DSM 22766 |
| 129 | 5188118 | 5188360 | - | NZ_LT906450.1 | Rhodococcus rhodochrous |
| 130 | 7131554 | 7131790 | + | NZ_CP010407.1 | Streptomyces vietnamensis |
| 131 | 3128338 | 3128577 | - | NC_010168.1 | Renibacterium salmoninarum ATCC 33209 |
| 132 | 3813797 | 3814036 | - | NC_014550.1 | Glutamicibacter arilaitensis Re117 |
| 133 | 974474 | 974710 | + | NC_014643.1 | Rothia dentocariosa ATCC 17931 |
| 134 | 2691515 | 2691751 | - | NZ_LR134479.1 | Rothia aeria |
| 135 | 2420285 | 2420521 | - | NZ_CP056080.1 | Rothia nasimurium |
| 136 | 4113999 | 4114238 | - | NZ_CP068013.1 | Paenarthrobacter ureafaciens |
| 137 | 4956513 | 4956749 | + | NZ_CP023691.1 | Streptomyces platensis |
| 138 | 2400590 | 2400826 | - | NZ_CP061538.1 | Rothia amarae |
| 139 | 3197446 | 3197685 | - | NZ_LR131272.1 | Arthrobacter agilis |
| 140 | 5084171 | 5084404 | + | NZ_CP015098.1 | Streptomyces qaidamensis |
| 141 | 2927760 | 2928002 | + | NZ_CP011005.1 | Psychromicrobium lacuslunae |
| 142 | 1293709 | 1293948 | - | NZ_CP018863.1 | Arthrobacter crystallopoietes |
| 143 | 1746643 | 1746885 | - | NZ_CP065050.1 | Streptomyces solisilvae |
| 144 | 1450530 | 1450793 | + | NZ_AP017457.1 | Aurantimicrobium minutum |
| 145 | 4123480 | 4123716 | - | NZ_CP023688.1 | Streptomyces rimosus |
| 146 | 3263978 | 3264217 | - | NZ_CP034412.1 | Glutamicibacter creatinolyticus |
| 147 | 3601213 | 3601452 | - | NZ_CP033081.1 | Glutamicibacter nicotianae |
| 148 | 4144960 | 4145202 | + | NZ_CP040752.1 | Streptomyces rectiverticillatus |
| 149 | 4532396 | 4532650 | + | NZ_LR026975.1 | Mycolicibacterium hassiacum DSM 44199 |
| 150 | 2475775 | 2476014 | - | NC_012803.1 | Micrococcus luteus NCTC 2665 |
| 151 | 5490762 | 5491004 | + | NZ_CP031455.1 | Streptomyces olivoreticuli subsp. olivoreticuli |
| 152 | 3629053 | 3629286 | - | NZ_CP010849.1 | Streptomyces cyaneogriseus subsp. noncyanogenus |
| 153 | 4155920 | 4156183 | - | NZ_CP016282.1 | Cryobacterium arcticum |
| 154 | 2489238 | 2489501 | + | NZ_CP030033.1 | Cryobacterium soli |
| 155 | 4822669 | 4822923 | - | NZ_AP024310.1 | Mycobacterium heckeshornense |
| 156 | 908188 | 908448 | + | NZ_AP022574.1 | Mycolicibacterium psychrotolerans |
| 157 | 4489948 | 4490181 | - | NC_013929.1 | Streptomyces scabiei 87.22 |
| 158 | 5486838 | 5487074 | + | NZ_CP070326.1 | Streptomyces noursei |
| 159 | 3975101 | 3975334 | + | NZ_CP022310.1 | Streptomyces calvus |
| 160 | 4875505 | 4875738 | + | NZ_CP021978.1 | Streptomyces hawaiiensis |
| 161 | 6817586 | 6817825 | - | NZ_CP031742.1 | Streptomyces koyangensis |
| 162 | 5425606 | 5425860 | - | NZ_AP022612.1 | Mycolicibacterium confluentis |
| 163 | 3642436 | 3642675 | + | NZ_CP013745.1 | Arthrobacter alpinus |
| 164 | 3310778 | 3311032 | + | NC_022663.1 | Mycobacterium kansasii ATCC 12478 |
| 165 | 447796 | 448035 | - | NZ_CP029642.1 | Arthrobacter dokdonellae |
| 166 | 1099179 | 1099424 | - | NZ_CP031264.1 | Streptacidiphilus bronchialis |
| 167 | 4259982 | 4260215 | - | NZ_CP030073.1 | Streptomyces cadmiisoli |
| 168 | 4585945 | 4586181 | - | NZ_CP023699.1 | Streptomyces kanamyceticus |
| 169 | 1894405 | 1894659 | + | NZ_AP022583.1 | Mycobacterium noviomagense |
| 170 | 2379484 | 2379738 | + | NZ_AP022599.1 | Mycolicibacterium pulveris |
| 171 | 4905823 | 4906077 | - | NZ_LT906483.1 | Mycolicibacterium thermoresistibile |
| 172 | 4429076 | 4429330 | + | NZ_AP022590.1 | Mycobacterium mantenii |
| 173 | 4970724 | 4970978 | + | NZ_AP022617.1 | Mycolicibacterium monacense |
| 174 | 4044994 | 4045248 | - | NZ_AP022619.1 | Mycobacterium paraseoulense |
| 175 | 5670601 | 5670837 | + | NC_003155.5 | Streptomyces avermitilis MA-4680 = NBRC 14893 |
| 176 | 6236990 | 6237223 | + | NZ_CP045096.1 | Streptomyces phaeolivaceus |
| 177 | 78781 | 79035 | + | NZ_CP009360.4 | Mycobacterium avium subsp. hominissuis |
| 178 | 1239435 | 1239698 | - | NZ_AP022588.1 | Mycolicibacterium sediminis |
| 179 | 3426827 | 3427084 | + | NZ_AP022569.1 | Mycobacterium cookii |
| 180 | 510350 | 510613 | + | NZ_AP022560.1 | Mycolicibacterium moriokaense |
| 181 | 3834110 | 3834370 | - | NZ_AP022605.1 | Mycobacterium doricum |
| 182 | 1512895 | 1513149 | - | NZ_AP022606.1 | Mycobacterium branderi |
| 183 | 4323811 | 4324074 | + | NZ_AP022608.1 | Mycolicibacterium gadium |
| 184 | 5370993 | 5371229 | + | NZ_CP023690.1 | Streptomyces spectabilis |
| 185 | 4495022 | 4495276 | - | NZ_AP022581.1 | Mycobacterium lacus |
| 186 | 3783939 | 3784193 | - | NZ_AP022609.1 | Mycolicibacter hiberniae |
| 187 | 3932559 | 3932813 | + | NZ_AP022575.1 | Mycobacterium shinjukuense |
| 188 | 4237953 | 4238207 | - | NZ_AP022582.1 | Mycobacterium seoulense |
| 189 | 3153542 | 3153796 | - | NZ_CP029543.1 | Mycobacterium leprae |
| 190 | 4337237 | 4337479 | - | NZ_CP032427.1 | Streptomyces griseorubiginosus |
| 191 | 5845258 | 5845512 | + | NZ_AP022613.1 | Mycobacterium conspicuum |
| 192 | 4486055 | 4486309 | - | NZ_LT906469.1 | Mycolicibacter terrae |
| 193 | 2003683 | 2003937 | + | NZ_AP022562.1 | Mycobacterium novum |
| 194 | 4598562 | 4598816 | - | NC_015576.1 | Mycolicibacter sinensis |
| 195 | 4889394 | 4889627 | + | NZ_CP071839.1 | Streptomyces cyanogenus |
| 196 | 4396556 | 4396810 | + | NZ_CP012382.1 | Streptomyces ambofaciens ATCC 23877 |
| 197 | 5313642 | 5313875 | + | NZ_CP047020.1 | Streptomyces broussonetiae |
| 198 | 87364 | 87618 | + | NZ_CP025546.1 | Mycobacterium paragordonae |
| 199 | 76906 | 77160 | + | NZ_CP011883.2 | Mycobacterium haemophilum DSM 44634 |
| 200 | 6185306 | 6185572 | - | NZ_CP011491.1 | Mycolicibacterium vaccae 95051 |
| 201 | 2719592 | 2719828 | + | NZ_CP030862.1 | Streptomyces globosus |
| 202 | 3234847 | 3235092 | - | NZ_CP034279.1 | Streptomyces ficellus |
| 203 | 6532770 | 6533006 | + | NZ_CP023693.1 | Streptomyces cinereoruber |
| 204 | 4372105 | 4372344 | + | NZ_CP023695.1 | Streptomyces alboniger |
| 205 | 5693809 | 5694048 | + | NZ_CP022744.1 | Streptomyces lincolnensis |
| 206 | 7269563 | 7269811 | - | NZ_CP013738.1 | Streptomyces globisporus C-1027 |
| 207 | 7694776 | 7695018 | - | NC_021177.1 | Streptomyces fulvissimus DSM 40593 |
| 208 | 3373309 | 3373536 | - | NC_019902.2 | Thioalkalivibrio nitratireducens DSM 14787 |
| 209 | 102072 | 102356 | + | NZ_CP065993.1 | Leuconostoc pseudomesenteroides |
| 210 | 1796546 | 1796830 | + | NZ_CP028251.1 | Leuconostoc mesenteroides |
| 211 | 1925144 | 1925428 | - | NZ_CP015247.1 | Leuconostoc suionicum |
| 212 | 1540984 | 1541268 | - | NZ_CP042410.1 | Leuconostoc citreum |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_016946.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01250.19 | 0.66 | 117 | 653 | same-strand | Ribosomal protein S6 |
| 2 | PF00436.27 | 0.65 | 116 | 44.5 | same-strand | Single-strand binding protein family |
| 3 | PF03948.16 | 0.66 | 117 | 21 | same-strand | Ribosomal protein L9, C-terminal domain |
| 4 | PF01281.21 | 0.66 | 117 | 21 | same-strand | Ribosomal protein L9, N-terminal domain |
++ More..