ProsmORF-pred
Result : Q72CS2
Protein Information
Information Type Description
Protein name 50S ribosomal protein L28
NCBI Accession ID AE017285.1
Organism Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303)
Left 1301234
Right 1301443
Strand +
Nucleotide Sequence ATGGGTAAGCAGTGCGAAGTTTGCGGCAAGAAGCCCCAGGTCGGCCACCATGTGAGCCACTCGAACATCAAGACCAAGCGTCGTTTCGAGCCCAACCTTCAGAGCGTTCGTCATCAGCTTCCTTCTGGCGAAGTGAAGACCGTGACCGTGTGCACTCGCTGCCTGCGTTCCGGTGCCGTCACCAAGCCCGTGGTTCGCAAGAGCGCCTAA
Sequence MGKQCEVCGKKPQVGHHVSHSNIKTKRRFEPNLQSVRHQLPSGEVKTVTVCTRCLRSGAVTKPVVRKSA
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl00367. Profile Description: Ribosomal L28 family. This model describes bacterial and chloroplast forms of the 50S ribosomal protein L28, a polypeptide about 60 amino acids in length. Mitochondrial homologs differ substantially in architecture (e.g. SP|P36525 from Saccharomyces cerevisiae, which is 258 amino acids long) and are not included. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Pubmed ID 15077118
Domain CDD:412338
Functional Category Ribosomal_protein
Uniprot ID Q72CS2
ORF Length (Amino Acid) 69
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Conservation Analysis
Conservation Analysis
No. of Species: 223
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 1304751 1304960 + NC_017310.1 Desulfovibrio vulgaris RCH1
2 2447280 2447489 - NC_007519.1 Desulfovibrio alaskensis G20
3 1437234 1437443 - NZ_CP014229.1 Desulfovibrio fairfieldensis
4 617399 617605 + NZ_CP026538.1 Desulfovibrio carbinolicus
5 4515650 4515856 - NC_012796.1 Desulfovibrio magneticus RS-1
6 1025625 1025834 - NC_020127.1 Lawsonia intracellularis N343
7 1642582 1642779 - NC_013223.1 Desulfohalobium retbaense DSM 5692
8 2762051 2762266 - NZ_LT907975.1 Pseudodesulfovibrio profundus
9 789975 790184 - NZ_CP045508.1 Desulfolutivibrio sulfoxidireducens
10 93627 93827 + NC_013173.1 Desulfomicrobium baculatum DSM 4028
11 3628791 3629000 - NZ_CP045504.1 Desulfovibrio sulfodismutans DSM 3696
12 721284 721496 + NC_012881.1 Maridesulfovibrio salexigens DSM 2638
13 1815415 1815627 - NZ_CP046400.1 Pseudodesulfovibrio cashew
14 3035497 3035709 + NC_014844.1 Pseudodesulfovibrio aespoeensis Aspo-2
15 1474432 1474641 - NZ_CP039543.1 Desulfovibrio marinus
16 2370058 2370267 - NZ_AP017378.1 Desulfovibrio ferrophilus
17 1846451 1846666 + NC_016803.1 Pseudodesulfovibrio mercurii
18 1396935 1397135 - NZ_CP014230.1 Desulfomicrobium orale DSM 12838
19 1394517 1394708 + NC_014365.1 Desulfarculus baarsii DSM 2075
20 2615176 2615379 + NC_016629.1 Desulfocurvibacter africanus subsp. africanus str. Walvis Bay
21 2530059 2530250 + NC_015388.1 Desulfobacca acetoxidans DSM 11109
22 4011924 4012118 - NC_008554.1 Syntrophobacter fumaroxidans MPOB
23 290288 290476 + NC_014216.1 Desulfurivibrio alkaliphilus AHT 2
24 575850 576047 + NZ_AP014945.1 Caldimicrobium thiodismutans
25 3137974 3138165 - NC_011768.1 Desulfatibacillum aliphaticivorans
26 2327689 2327883 - NZ_CP040098.1 Desulfoglaeba alkanexedens ALDC
27 430164 430376 - NC_011978.1 Thermotoga neapolitana DSM 4359
28 2443775 2443969 + NC_010814.1 Geobacter lovleyi SZ
29 67925 68119 - NZ_CP054140.1 Desulfobulbus oligotrophicus
30 680094 680306 - NC_023151.1 Thermotoga maritima MSB8
31 1383459 1383650 - NC_013205.1 Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
32 5655213 5655404 + NZ_AP021876.1 Desulfosarcina ovata subsp. sediminis
33 678002 678214 - NC_009486.1 Thermotoga petrophila RKU-1
34 916606 916818 + NC_013642.1 Thermotoga naphthophila RKU-10
35 923699 923896 - NZ_CP042909.1 Thermosulfurimonas marina
36 242257 242454 - NZ_CP008796.1 Thermodesulfobacterium commune DSM 2178
37 1411440 1411637 + NC_015682.1 Thermodesulfobacterium geofontis OPF15
38 3400021 3400212 - NZ_AP021874.1 Desulfosarcina alkanivorans
39 4129354 4129545 - NZ_AP021875.1 Desulfosarcina widdelii
40 3729871 3730062 + NC_009483.1 Geobacter uraniireducens Rf4
41 2009884 2010084 - NZ_AP014510.1 Thermotoga profunda AZM34c06
42 1524820 1525011 - NZ_CP010311.1 Geoalkalibacter subterraneus
43 1510522 1510713 - NC_007498.2 Syntrophotalea carbinolica DSM 2380
44 367025 367213 - NZ_CP015519.1 Syntrophotalea acetylenivorans
45 2449918 2450109 + NC_002939.5 Geobacter sulfurreducens PCA
46 3406436 3406627 - NZ_CP021434.1 Tumebacillus avium
47 2506165 2506356 + NC_009943.1 Desulfococcus oleovorans Hxd3
48 1843116 1843313 - NZ_CP018099.1 Caldithrix abyssi DSM 13497
49 1723106 1723303 + NC_009828.1 Pseudothermotoga lettingae TMO
50 1758161 1758358 + NC_022792.1 Pseudothermotoga elfii DSM 9442 = NBRC 107921
51 2960011 2960202 + NZ_CP022657.1 Tumebacillus algifaecis
52 2859890 2860084 - NC_014972.1 Desulfobulbus propionicus DSM 2032
53 1884862 1885056 + NC_006138.1 Desulfotalea psychrophila LSv54
54 2382681 2382872 - NC_011979.1 Geobacter daltonii FRC-32
55 2986008 2986229 + NC_011891.1 Anaeromyxobacter dehalogenans 2CP-1
56 977811 978002 + NC_014150.1 Brachyspira murdochii DSM 12563
57 2259177 2259371 + NZ_AP017470.1 Thermotomaculum hydrothermale
58 84611 84805 - NC_018645.1 Desulfobacula toluolica Tol2
59 2126273 2126464 + NZ_CP036259.1 Sporomusa termitida
60 2631537 2631728 + NC_007517.1 Geobacter metallireducens GS-15
61 2581635 2581829 + NC_020304.1 Desulfocapsa sulfexigens DSM 10523
62 6725459 6725650 + NC_017030.1 Corallococcus coralloides DSM 2259
63 316465 316659 + NZ_AP012333.1 Parascardovia denticolens DSM 10105 = JCM 12538
64 2122408 2122599 - NZ_LT996885.1 Dialister massiliensis
65 210188 210385 + NZ_CP021255.1 Desulfobulbus oralis
66 959077 959268 + NZ_CP029462.1 Megasphaera stantonii
67 1282007 1282195 + NZ_CP020921.1 Thermodesulfobium acidiphilum
68 2631571 2631762 + NZ_CP045529.1 Luteimicrobium xylanilyticum
69 2296892 2297083 + NZ_CP009788.1 Geobacter pickeringii
70 395950 396141 - NZ_CP061800.1 Desulfonema magnum
71 3249090 3249281 + NZ_CP041694.1 Cellulosimicrobium cellulans
72 945982 946176 + NC_013522.1 Thermanaerovibrio acidaminovorans DSM 6589
73 114294 114485 + NZ_CP009240.1 Megasphaera elsdenii 14-14
74 1073461 1073655 + NC_016148.1 Thermovirga lienii DSM 17291
75 1675601 1675798 + NC_007759.1 Syntrophus aciditrophicus SB
76 1394683 1394907 - NC_012108.1 Desulfobacterium autotrophicum HRM2
77 1345495 1345716 - NZ_CP014334.1 Fervidobacterium islandicum
78 1789531 1789722 - NC_012785.1 Kosmotoga olearia TBF 19.5.1
79 2466617 2466808 + NC_013530.1 Xylanimonas cellulosilytica DSM 15894
80 1519730 1519921 - NC_011661.1 Dictyoglomus turgidum DSM 6724
81 1335333 1335524 - NC_011297.1 Dictyoglomus thermophilum H-6-12
82 6894698 6894889 + NZ_CP015136.1 Luteitalea pratensis
83 1121643 1121864 + NC_009718.1 Fervidobacterium nodosum Rt17-B1
84 1171352 1171543 - NZ_CP046932.1 Brachyspira hyodysenteriae
85 1316013 1316234 - NC_017095.1 Fervidobacterium pennivorans DSM 9078
86 704234 704425 + NC_017243.1 Brachyspira intermedia PWS/A
87 4069275 4069466 - NZ_AP018449.1 Methylomusa anaerophila
88 911420 911611 - NC_015437.1 Selenomonas sputigena ATCC 35185
89 457448 457639 + NC_017934.1 Mesotoga prima MesG1.Ag.4.2
90 591229 591420 + NZ_CP011232.1 Kosmotoga pacifica
91 1710385 1710558 - NZ_CP011801.1 Nitrospira moscoviensis
92 5419634 5419825 + NZ_CP012109.1 Myxococcus hansupus
93 3427227 3427418 + NZ_LT828648.1 Nitrospira japonica
94 2355403 2355594 + NZ_CP019914.1 Brachyspira hampsonii
95 2237376 2237567 - NC_013947.1 Stackebrandtia nassauensis DSM 44728
96 3928090 3928281 - NC_020126.1 Myxococcus stipitatus DSM 14675
97 1617456 1617647 - NZ_AP019004.1 Phascolarctobacterium faecium
98 2595584 2595775 + NC_008609.1 Pelobacter propionicus DSM 2379
99 1431356 1431550 - NZ_AP012334.1 Scardovia inopinata JCM 12537
100 388766 388966 + NZ_AP014509.1 Thermotoga caldifontis AZM44c09
101 3146723 3146914 - NC_008095.1 Myxococcus xanthus DK 1622
102 1353011 1353202 + NZ_CP061799.1 Desulfonema limicola
103 245241 245432 - NZ_CP035495.1 Xylanimonas allomyrinae
104 1436896 1437078 - NC_009380.1 Salinispora tropica CNB-440
105 1372361 1372549 + NC_015499.1 Thermodesulfobium narugense DSM 14796
106 4458691 4458885 + NC_018025.1 Desulfomonile tiedjei DSM 6799
107 1505243 1505434 - NC_006177.1 Symbiobacterium thermophilum IAM 14863
108 1311653 1311841 + NC_007503.1 Carboxydothermus hydrogenoformans Z-2901
109 1483867 1484052 - NC_012115.1 Nautilia profundicola AmH
110 1403959 1404141 - NC_014391.1 Micromonospora aurantiaca ATCC 27029
111 147158 147352 - NZ_CP014209.1 Isoptericola dokdonensis DS-3
112 284894 285091 + NZ_CP022544.1 Bifidobacterium pseudolongum
113 590425 590613 + NC_016631.1 Granulicella mallensis MP5ACTX8
114 4341626 4341808 - NZ_CP016793.1 Lentzea guizhouensis
115 1229619 1229810 + NZ_CP018800.1 Mariprofundus ferrinatatus
116 7991477 7991659 + NC_022657.1 Actinoplanes friuliensis DSM 7358
117 2257147 2257338 + NC_015588.1 Isoptericola variabilis 225
118 301482 301673 - NC_014330.1 Brachyspira pilosicoli 95/1000
119 7671092 7671274 + NC_017093.1 Actinoplanes missouriensis 431
120 2152161 2152352 - NC_010337.2 Heliomicrobium modesticaldum Ice1
121 1795254 1795445 + NZ_CP048649.1 Aminipila butyrica
122 756705 756896 - NZ_CP048877.1 Thermosulfuriphilus ammonigenes
123 1055884 1056096 - NZ_CP007389.1 Thermosipho melanesiensis
124 986741 986929 - NZ_LR778174.1 Veillonella parvula
125 539074 539265 - NC_013740.1 Acidaminococcus fermentans DSM 20731
126 3536265 3536450 - NZ_CP014989.1 Serinicoccus hydrothermalis
127 2055588 2055761 - NC_013235.1 Nakamurella multipartita DSM 44233
128 1635708 1635902 + NZ_AP022826.1 Nitrosophilus labii
129 2123651 2123836 + NZ_CP040887.1 Serinicoccus chungangensis
130 1919692 1919883 - NZ_CP045875.1 Heliorestis convoluta
131 1187869 1188060 - NC_013216.1 Desulfofarcimen acetoxidans DSM 771
132 1293914 1294099 - NZ_CP026952.1 Aeromicrobium chenweiae
133 241475 241669 + NZ_AP012322.1 Bifidobacterium angulatum DSM 20098 = JCM 7096
134 1195526 1195711 - NZ_CP045737.1 Aeromicrobium yanjiei
135 871920 872108 - NZ_CP017237.1 Moorella thermoacetica
136 1847036 1847227 - NZ_CP010802.1 Desulfuromonas soudanensis
137 1149930 1150121 - NZ_CP018799.1 Mariprofundus aestuarium
138 987576 987767 - NZ_LS483427.1 Arcanobacterium haemolyticum
139 2055762 2055953 - NC_020520.1 Ilumatobacter coccineus YM16-304
140 818430 818624 - NC_018024.1 Acetomicrobium mobile DSM 13181
141 515443 515655 - NC_014963.1 Terriglobus saanensis SP1PR4
142 325232 325426 + NZ_CP006018.1 Bifidobacterium indicum LMG 11587 = DSM 20214
143 338485 338679 + NZ_CP007287.1 Bifidobacterium coryneforme
144 1238218 1238409 + NZ_CP070228.1 Arcanobacterium phocisimile
145 2985754 2985942 + NZ_CP022121.1 Dehalobacterium formicoaceticum
146 382962 383156 + NZ_AP012326.1 Bifidobacterium dentium JCM 1195 = DSM 20436
147 1970757 1970948 + NC_014614.1 Acetoanaerobium sticklandii
148 751718 751909 + NZ_CP007519.1 Trueperella pyogenes
149 3937136 3937324 - NC_013739.1 Conexibacter woesei DSM 14684
150 379359 379544 + NZ_CP040463.1 Caminibacter mediatlanticus TB-2
151 390081 390275 + NZ_CP026999.1 Bifidobacterium longum
152 1914227 1914418 - NZ_LR134476.1 Trueperella bialowiezensis
153 2481650 2481835 + NZ_CP038213.1 Ornithinimicrobium flavum
154 1737405 1737593 - NC_015589.1 Desulfotomaculum ruminis DSM 2154
155 1853467 1853649 - NZ_LR134363.1 Actinomyces slackii
156 2677062 2677244 + NZ_CP066049.1 Actinomyces naeslundii
157 2395231 2395416 + NZ_CP011502.1 Aeromicrobium erythreum
158 3539168 3539359 - NZ_CP047156.1 Epidermidibacterium keratini
159 2947293 2947475 + NZ_CP014228.1 Actinomyces radicidentis
160 1366684 1366878 - NZ_CP045851.1 Actinomarinicola tropica
161 1631787 1631969 + NZ_CP066060.1 Actinomyces oris
162 431794 431976 - NZ_LR134477.1 Actinomyces viscosus
163 2190479 2190664 + NZ_CP044427.1 Ornithinimicrobium pratense
164 418681 418875 + NC_018720.1 Bifidobacterium asteroides PRL2011
165 426893 427084 - NZ_CP022347.1 Campylobacter avium LMG 24591
166 1550726 1550914 + NZ_AP022847.1 Nitrosophilus alvini
167 1048249 1048431 - NZ_CP025227.1 Actinomyces wuliandei
168 109211 109393 - NZ_LR134350.1 Actinomyces howellii
169 2636747 2636941 - NZ_AP012331.1 Bifidobacterium scardovii JCM 12489 = DSM 13734
170 1980973 1981167 - NZ_CP006712.1 Bifidobacterium breve JCM 7017
171 1841838 1842029 - NC_012669.1 Beutenbergia cavernae DSM 12333
172 1343580 1343771 + NZ_CP017812.1 Boudabousia tangfeifanii
173 1426150 1426341 + NC_008593.1 Clostridium novyi NT
174 700303 700491 + NC_016630.1 Filifactor alocis ATCC 35896
175 3290355 3290546 + NC_018017.1 Desulfitobacterium dehalogenans ATCC 51507
176 4078588 4078779 + NC_011830.1 Desulfitobacterium hafniense DCB-2
177 3046959 3047150 + NZ_CP042430.1 Baekduia soli
178 3385365 3385556 + NC_016906.1 Gordonia polyisoprenivorans VH2
179 1547799 1547981 + NZ_CP053642.1 Actinomyces marmotae
180 1568009 1568200 + NC_017094.1 Leptospirillum ferrooxidans C2-3
181 2325919 2326110 + NZ_CP007032.1 Desulfitobacterium metallireducens DSM 15288
182 4913796 4913987 + NC_016584.1 Desulfosporosinus orientis DSM 765
183 276401 276595 + NZ_CP028341.1 Bifidobacterium adolescentis
184 1285984 1286178 - NZ_CP062938.1 Bifidobacterium eulemuris
185 3829250 3829441 + NC_018068.1 Desulfosporosinus acidiphilus SJ4
186 1590662 1590856 + NZ_CP062948.1 Bifidobacterium lemurum
187 288471 288665 + NZ_CP025199.1 Bifidobacterium pseudocatenulatum
188 1104458 1104640 - NZ_CP039292.1 Actinomyces procaprae
189 243308 243502 + NZ_AP012325.1 Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043
190 1584701 1584889 + NC_013124.1 Acidimicrobium ferrooxidans DSM 10331
191 468027 468203 - NZ_AP022873.1 Dissulfurispira thermophila
192 1552871 1553059 - NZ_CP021850.1 Pseudoclostridium thermosuccinogenes
193 4829533 4829724 - NZ_CP011125.1 Sandaracinus amylolyticus
194 1612394 1612576 + NZ_CP066802.1 Actinomyces weissii
195 1280319 1280501 + NZ_LR134357.1 Actinomyces israelii
196 1115014 1115205 - NZ_CP046996.1 Dehalobacter restrictus
197 702864 703037 + NZ_LT635457.1 Actinomyces pacaensis
198 3919171 3919359 + NC_018515.1 Desulfosporosinus meridiei DSM 13257
199 661590 661781 + NZ_CP008802.1 Actinotignum schaalii
200 2368595 2368786 + NC_015172.1 Syntrophobotulus glycolicus DSM 8271
201 291868 292077 - NZ_CP063164.1 Sulfurovum indicum
202 1202626 1202814 - NZ_CP019870.1 Clostridioides difficile
203 851807 851995 - NZ_CP045927.1 Staphylococcus agnetis
204 1707439 1707627 + NZ_CP008747.1 Staphylococcus hyicus
205 579456 579644 + NZ_CP014022.1 Staphylococcus lugdunensis
206 1694579 1694767 - NZ_CP066042.1 Staphylococcus saccharolyticus
207 1823062 1823247 - NZ_LT906441.1 Cutibacterium granulosum
208 1648605 1648793 + NZ_CP064056.1 Staphylococcus lloydii
209 1682137 1682325 + NZ_CP035288.1 Staphylococcus epidermidis
210 873083 873271 - NZ_CP013911.1 Staphylococcus haemolyticus
211 1119591 1119779 + NZ_CP016809.1 Paenibacillus ihbetae
212 109658 109846 + NZ_CP033732.1 Staphylococcus hominis
213 4258416 4258604 + NZ_CP048209.1 Paenibacillus lycopersici
214 1794954 1795142 + NZ_CP018776.1 Staphylococcus condimenti
215 1287611 1287799 - NZ_CP033460.1 Staphylococcus debuckii
216 978050 978238 - NC_014925.1 Staphylococcus pseudintermedius HKU10-03
217 3083832 3084020 + NC_014624.2 Eubacterium callanderi
218 1355825 1356013 + NZ_CP029487.1 Eubacterium maltosivorans
219 1168458 1168646 - NZ_LT906460.1 Staphylococcus simiae
220 1213341 1213529 - NZ_LR134304.1 Staphylococcus schweitzeri
221 1142974 1143162 - NC_007795.1 Staphylococcus aureus subsp. aureus NCTC 8325
222 2162608 2162796 - NZ_CP019962.1 Eubacterium limosum
223 6455081 6455269 - NZ_CP048286.1 Paenibacillus rhizovicinus
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