ProsmORF-pred
Result : A8Z5V7
Protein Information
Information Type Description
Protein name 50S ribosomal protein L35
NCBI Accession ID CP000770.2
Organism Sulcia muelleri (strain GWSS)
Left 88241
Right 88438
Strand +
Nucleotide Sequence ATGTTTAAATTAAAAACTAAATCTGGAGCAAAAAAACGTTTTAAATTTATAGTAAATGGAAAAATTAAGAGAAAAAAATCATTTAAAAATCATCTTTTAACTAAAAAAGAGAATAAAAGAAAACGTAGATTATCCTACTTTTCTAGAGTACACAAATCAGATATAAAAAATATAAAAAAACAATTATTATTAAATTAA
Sequence MFKLKTKSGAKKRFKFIVNGKIKRKKSFKNHLLTKKENKRKRRLSYFSRVHKSDIKNIKKQLLLN
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl00392. Profile Description: Ribosomal protein L35. This ribosomal protein is found in bacteria and organelles only. It is not closely related to any eukaryotic or archaeal ribosomal protein. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Pubmed ID 18048332
Domain CDD:412354
Functional Category Ribosomal_protein
Uniprot ID A8Z5V7
ORF Length (Amino Acid) 65
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 518
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 5450083 5450277 + NZ_CP032382.1 Chryseolinea soli
2 1149309 1149506 - NZ_LT899436.1 Tenacibaculum jejuense
3 165651 165848 - NZ_CP063145.1 Cruoricaptor ignavus
4 652763 652957 - NC_014759.1 Marivirga tractuosa DSM 4126
5 427834 428031 + NC_017045.1 Riemerella anatipestifer ATCC 11845 = DSM 15868
6 4321760 4321957 + NZ_CP015199.1 Chryseobacterium glaciei
7 605522 605719 - NZ_CP013118.1 Salinivirga cyanobacteriivorans
8 329325 329522 + NZ_CP013210.1 Empedobacter brevis
9 2445900 2446097 + NZ_CP020822.1 Tenacibaculum maritimum
10 192391 192579 - NC_020510.1 Blattabacterium cuenoti BPAA
11 2699294 2699491 - NZ_CP053698.1 Empedobacter stercoris
12 3417640 3417837 + NZ_CP040908.1 Empedobacter falsenii
13 427739 427939 + NC_018018.1 Bernardetia litoralis DSM 6794
14 4244540 4244737 + NZ_CP017479.1 Flavobacterium gilvum
15 1073607 1073804 + NC_010729.1 Porphyromonas gingivalis ATCC 33277
16 20081 20278 + NZ_CP054494.1 Flavobacterium columnare
17 1354185 1354382 - NZ_CP017688.1 Flavobacterium crassostreae
18 2505571 2505768 - NZ_CP020918.1 Flavobacterium faecale
19 2703560 2703757 - NC_015167.1 Cellulophaga lytica DSM 7489
20 1883416 1883613 - NZ_CP028811.1 Flavobacterium magnum
21 2592445 2592642 - NZ_CP033929.1 Chryseobacterium indoltheticum
22 807850 808047 + NZ_AP018042.1 Labilibaculum antarcticum
23 255499 255696 - NZ_LR134503.1 Kaistella jeonii
24 574230 574427 - NZ_CP033926.1 Chryseobacterium joostei
25 2913607 2913804 - NZ_LR134386.1 Chryseobacterium nakagawai
26 610832 611029 - NZ_LR134289.1 Chryseobacterium gleum
27 3881103 3881300 - NZ_CP033924.1 Chryseobacterium lactis
28 2263727 2263924 + NZ_CP033914.1 Chryseobacterium shandongense
29 758019 758216 + NZ_LR215974.1 Chryseobacterium taihuense
30 1026489 1026686 - NZ_CP050995.1 Chryseobacterium gallinarum
31 390556 390753 - NZ_CP022986.1 Chryseobacterium camelliae
32 3856949 3857146 - NZ_CP033932.1 Chryseobacterium bernardetii
33 1443337 1443531 - NZ_CP034562.1 Flammeovirga pectinis
34 4233937 4234134 + NZ_CP033920.1 Chryseobacterium carnipullorum
35 588735 588932 + NZ_CP017774.1 Flavobacterium commune
36 29671 29868 + NZ_CP029255.1 Flavobacterium crocinum
37 2208345 2208542 + NZ_CP022389.1 Capnocytophaga canimorsus
38 530780 530977 - NZ_CP034930.1 Apibacter raozihei
39 2786215 2786412 - NZ_CP016907.1 Flavobacterium anhuiense
40 2706421 2706618 - NZ_CP043612.1 Flavobacterium nitrogenifigens
41 2005083 2005280 - NZ_CP029187.1 Flavobacterium pallidum
42 3633807 3634004 - NZ_CP037933.1 Flavobacterium nackdongense
43 4056735 4056932 + NZ_CP020919.1 Flavobacterium kingsejongi
44 32999 33196 + NC_009441.1 Flavobacterium johnsoniae UW101
45 1713839 1714036 - NZ_CP006828.1 Ornithobacterium rhinotracheale ORT-UMN 88
46 1496995 1497192 + NZ_CP018155.1 Tenacibaculum todarodis
47 339881 340078 - NZ_LR134441.1 Kaistella antarctica
48 289765 289962 - NZ_CP034159.1 Kaistella carnis
49 2728112 2728309 - NZ_CP034161.1 Epilithonimonas vandammei
50 180069 180266 - NZ_CP042476.1 Antarcticibacterium arcticum
51 3282263 3282460 - NZ_CP040812.1 Antarcticibacterium flavum
52 1894905 1895102 + NZ_CP022378.1 Capnocytophaga cynodegmi
53 1107322 1107519 + NZ_CP023049.2 Chryseobacterium piperi
54 843436 843633 - NZ_CP022387.1 Capnocytophaga stomatis
55 275435 275632 - NC_020156.1 Nonlabens dokdonensis DSW-6
56 1783866 1784063 - NZ_CP038810.1 Flavobacterium sangjuense
57 89935 90129 - NZ_CP030041.1 Echinicola strongylocentroti
58 3776360 3776557 + NZ_CP029186.1 Flavobacterium album
59 3685775 3685972 + NZ_CP042831.1 Flavobacterium alkalisoli
60 1750933 1751130 - NZ_CP019342.1 Nonlabens tegetincola
61 151016 151213 - NZ_LT906465.1 Chryseobacterium taklimakanense
62 1476110 1476307 + NC_014734.1 Paludibacter propionicigenes WB4
63 1479038 1479235 - NZ_CP034549.1 Nonlabens ponticola
64 444301 444498 + NZ_CP031188.1 Flavobacterium arcticum
65 5318690 5318887 - NZ_CP019288.1 Kordia antarctica
66 2937500 2937697 + NC_016001.1 Flavobacterium branchiophilum FL-15
67 2980048 2980245 - NC_014934.1 Cellulophaga algicola DSM 14237
68 1095834 1096028 - NZ_CP032317.1 Hymenobacter oligotrophus
69 2413076 2413273 - NZ_CP009976.1 Cellulophaga baltica 18
70 892509 892706 + NZ_CP025791.1 Flavivirga eckloniae
71 405962 406159 + NZ_CP058595.1 Costertonia aggregata
72 4593435 4593632 - NZ_CP007451.1 Draconibacterium orientale
73 4624337 4624534 + NZ_CP021904.1 Alkalitalea saponilacus
74 1766405 1766602 - NZ_LR134404.1 Weeksella virosa
75 4324289 4324483 - NZ_CP040106.1 Echinicola rosea
76 3701739 3701933 + NZ_CP012040.1 Cyclobacterium amurskyense
77 581005 581202 + NZ_CP016359.1 Gramella flava JLT2011
78 7333484 7333678 - NZ_CP048222.1 Rhodocytophaga rosea
79 37145 37342 + NZ_CP039456.1 Changchengzhania lutea
80 1006041 1006238 - NC_017025.1 Flavobacterium indicum GPTSA100-9 = DSM 17447
81 3129657 3129854 + NZ_LR778301.1 Denitratisoma oestradiolicum
82 310101 310298 + NZ_CP022957.1 Maribacter cobaltidurans
83 672544 672741 - NC_008571.1 Gramella forsetii KT0803
84 71519 71716 - NZ_CP018153.1 Gramella salexigens
85 152762 152959 + NZ_CP028136.1 Gramella fulva
86 4060179 4060373 + NC_019904.1 Echinicola vietnamensis DSM 17526
87 304979 305176 - NC_015321.1 Fluviicola taffensis DSM 16823
88 1486056 1486253 + NZ_CP015067.2 Elizabethkingia anophelis
89 1086800 1086997 - NZ_CP014337.1 Elizabethkingia bruuniana
90 397711 397908 - NZ_AP014564.1 Ichthyobacterium seriolicida
91 1188169 1188366 + NZ_CP054012.1 Parabacteroides distasonis
92 7750861 7751061 - NZ_CP042437.1 Mucilaginibacter ginsenosidivorax
93 3069866 3070066 - NZ_CP038029.1 Sphingobacterium psychroaquaticum
94 118823 119020 - NZ_CP039934.1 Myroides fluvii
95 286737 286934 + NZ_LT605205.1 Proteiniphilum saccharofermentans
96 2396097 2396297 - NC_017770.1 Solitalea canadensis DSM 3403
97 706514 706711 + NZ_CP034120.1 Glaciecola amylolytica
98 1367742 1367939 + NZ_CP010817.1 Myroides profundi
99 1251822 1252022 + NZ_CP030848.1 Sphingobacterium hotanense
100 2145844 2146041 + NZ_CP019352.1 Lacinutrix venerupis
101 5655829 5656029 - NZ_LR590484.1 Sphingobacterium thalpophilum
102 65379 65576 + NZ_CP015125.1 Dokdonia donghaensis DSW-1
103 3088270 3088464 + NZ_CP044285.1 Hymenobacter baengnokdamensis
104 2726510 2726704 - NZ_CP012836.1 Algoriphagus sanaruensis
105 2945965 2946165 - NZ_CP022743.1 Mucilaginibacter xinganensis
106 2501747 2501941 + NZ_CP055153.1 Adhaeribacter radiodurans
107 985772 985969 + NZ_CP029331.1 Thauera hydrothermalis
108 3845805 3846005 - NZ_CP049246.1 Sphingobacterium lactis
109 5032024 5032218 + NZ_CP055156.1 Adhaeribacter swui
110 3903567 3903764 + NC_014041.1 Zunongwangia profunda SM-A87
111 4179797 4179991 + NZ_CP014766.1 Pontibacter akesuensis
112 2399462 2399656 + NZ_CP007145.1 Hymenobacter swuensis DY53
113 3794656 3794856 + NZ_CP042436.1 Mucilaginibacter ginsenosidivorans
114 1703003 1703197 - NZ_CP021235.1 Pontibacter actiniarum
115 4459541 4459735 - NZ_CP009621.1 Pontibacter korlensis
116 2946622 2946819 + NC_018010.1 Belliella baltica DSM 15883
117 2436965 2437162 - NZ_CP022579.1 Oryzomicrobium terrae
118 2454499 2454693 - NZ_CP037922.1 Hymenobacter radiodurans
119 510800 510994 + NZ_CP047897.1 Nibribacter ruber
120 4595698 4595892 - NZ_CP040896.1 Hymenobacter jejuensis
121 3211519 3211719 - NZ_AP017313.1 Mucilaginibacter gotjawali
122 3661531 3661725 + NC_015914.1 Cyclobacterium marinum DSM 745
123 2327013 2327210 - NZ_CP061703.1 Mesoflavibacter profundi
124 194765 194962 + NZ_CP014646.1 Thauera humireducens
125 1705907 1706101 + NZ_CP010777.1 Rufibacter radiotolerans
126 1315984 1316181 + NZ_CP025682.1 Azoarcus pumilus
127 523513 523710 + NZ_CP027234.1 Bacteroides heparinolyticus
128 3985713 3985910 - NZ_CP012898.1 Algibacter alginicilyticus
129 4927394 4927588 + NZ_CP047984.1 Pontibacter russatus
130 1928473 1928667 + NC_008255.1 Cytophaga hutchinsonii ATCC 33406
131 525772 525969 + NZ_AP018558.1 Hydrogenophilus thermoluteolus
132 701697 701903 - NC_013501.1 Rhodothermus marinus DSM 4252
133 858220 858417 + NZ_LR134506.1 Porphyromonas cangingivalis
134 378717 378914 - NZ_LR134533.1 Neisseria weaveri
135 1488312 1488509 - NZ_LR134516.1 Neisseria animaloris
136 2310878 2311075 - NZ_LT906434.1 Neisseria zoodegmatis
137 1429763 1429960 + NZ_CP059564.1 Alysiella filiformis
138 38468 38662 + NZ_CP050954.1 Hymenobacter sp. BT18
139 2233088 2233285 + NZ_CP018839.1 Thauera chlorobenzoica
140 825181 825378 + NZ_CP034118.1 Staphylospora marina
141 3089663 3089863 - NZ_LR590470.1 Sphingobacterium daejeonense
142 1994304 1994501 - NZ_LS483447.1 Porphyromonas crevioricanis
143 1387603 1387797 - NZ_CP029145.1 Hymenobacter nivis
144 2091457 2091654 - NZ_CP031700.1 Neisseria zalophi
145 2183982 2184179 + NZ_CP041345.1 Tenuifilum thalassicum
146 453797 453994 - NZ_CP019448.1 Simonsiella muelleri ATCC 29453
147 2521945 2522142 - NZ_AP012547.1 Sulfuritalea hydrogenivorans sk43H
148 3522692 3522889 - NZ_CP010310.2 Pandoraea pulmonicola
149 508784 508981 - NC_006513.1 Aromatoleum aromaticum EbN1
150 3126420 3126617 + NZ_CP059467.1 Aromatoleum bremense
151 4589428 4589622 - NZ_CP012643.1 Rufibacter tibetensis
152 886073 886267 + NZ_CP048106.1 Pontibacter pudoricolor
153 1287840 1288037 + NZ_CP028339.1 Thauera aromatica K172
154 3510060 3510257 - NZ_CP032157.1 Paraflavitalea soli
155 812064 812261 - NZ_CP007034.1 Barnesiella viscericola DSM 18177
156 1587444 1587641 - NZ_CP059560.1 Aromatoleum petrolei
157 2057782 2057979 + NZ_CP064781.1 Azospira restricta
158 2516110 2516307 - NZ_CP060414.1 Neisseria musculi
159 1247113 1247310 + NZ_CP016210.1 Azoarcus olearius
160 3168465 3168662 - NC_023018.2 Pandoraea pnomenusa
161 1285840 1286037 - NZ_CP011412.1 Sedimenticola thiotaurini
162 2011687 2011884 - NZ_CP012154.1 Wenzhouxiangella marina
163 1165814 1166011 + NC_013162.1 Capnocytophaga ochracea DSM 7271
164 349428 349625 - NZ_CP022022.1 Capnocytophaga endodontalis
165 3054721 3054918 - NZ_CP011807.3 Pandoraea faecigallinarum
166 3309779 3309976 - NZ_CP011253.3 Pandoraea oxalativorans
167 2110036 2110233 + NZ_LT906435.1 Pandoraea sputorum
168 1735009 1735206 - NZ_CP022379.1 Capnocytophaga sputigena
169 2234291 2234485 - NZ_AP023049.1 Alistipes indistinctus
170 1591668 1591865 - NC_006138.1 Desulfotalea psychrophila LSv54
171 3563837 3564031 - NZ_CP013909.1 Hymenobacter sedentarius
172 1693581 1693775 + NC_015501.1 Porphyromonas asaccharolytica DSM 20707
173 419701 419898 + NC_008576.1 Magnetococcus marinus MC-1
174 1758397 1758591 + NZ_CP011835.1 Azotobacter chroococcum
175 4566624 4566818 + NZ_CP045302.1 Azotobacter salinestris
176 2040550 2040747 + NZ_CP013480.3 Pandoraea norimbergensis
177 3387826 3388023 - NZ_CP010897.2 Pandoraea vervacti
178 701912 702106 + NZ_CP029480.1 Arcticibacterium luteifluviistationis
179 3002001 3002198 + NZ_CP047385.1 Pandoraea fibrosis
180 1562283 1562480 + NC_016048.1 Oscillibacter valericigenes Sjm18-20
181 1492412 1492615 - NZ_CP016278.1 Diaphorobacter polyhydroxybutyrativorans
182 1195316 1195513 - NZ_CP059567.1 Neisseria shayeganii
183 1843235 1843429 + NZ_CP047698.1 Pseudomonas knackmussii
184 2643233 2643430 - NC_016609.1 Niastella koreensis GR20-10
185 3398327 3398524 - NZ_CP013481.2 Pandoraea apista
186 2519332 2519529 - NZ_CP011071.1 Muricauda lutaonensis
187 752722 752919 + NC_012969.1 Methylovorus glucosetrophus SIP3-4
188 2643275 2643478 + NZ_CP020121.1 Comamonas kerstersii
189 1197960 1198154 - NC_014655.1 Leadbetterella byssophila DSM 17132
190 1681919 1682116 + NZ_CP031325.1 Neisseria polysaccharea
191 1620390 1620587 + NZ_CP012028.1 Neisseria gonorrhoeae
192 193045 193242 + NZ_CP038018.1 Eikenella exigua
193 1274657 1274854 - NZ_CP031252.1 Neisseria elongata
194 373375 373572 + NZ_CP021520.1 Neisseria meningitidis
195 2740881 2741078 - NZ_CP013355.1 Lutibacter profundi
196 282376 282573 + NZ_CP072524.1 Neisseria sicca
197 2468418 2468615 - NZ_CP059571.1 Neisseria bacilliformis
198 1116999 1117196 + NC_022357.1 Sulfuricella denitrificans skB26
199 1321304 1321501 + NZ_LT906482.1 Eikenella corrodens
200 43824 44018 + NZ_CP015402.2 Muribaculum intestinale
201 1069903 1070100 + NZ_CP022987.1 Pusillimonas thiosulfatoxidans
202 1522857 1523054 - NZ_CP009170.1 Thermoanaerobacter kivui
203 4634646 4634840 - NZ_CP014158.1 Pseudomonas citronellolis
204 701233 701427 - NZ_CP012362.1 Oblitimonas alkaliphila
205 1272365 1272559 - NC_002971.4 Coxiella burnetii RSA 493
206 427790 427987 + NZ_CP039887.1 Neisseria subflava
207 2385893 2386090 + NZ_CP059066.1 Koleobacter methoxysyntrophicus
208 2117150 2117344 - NZ_CP014263.1 Spirosoma montaniterrae
209 644290 644487 + NC_015520.1 Mahella australiensis 50-1 BON
210 5083208 5083402 - NZ_CP048833.1 Pseudomonas multiresinivorans
211 2663909 2664103 - NZ_CP012676.1 Pseudomonas versuta
212 4039710 4039904 - NZ_CP049044.1 Pseudomonas psychrophila
213 810951 811148 + NC_014964.1 Thermoanaerobacter brockii subsp. finnii Ako-1
214 1654253 1654450 - NC_015958.1 Thermoanaerobacter wiegelii Rt8.B1
215 3290177 3290374 - NZ_CP013341.1 Nitrosomonas ureae
216 3610884 3611078 - NZ_CP068034.2 Pseudomonas syringae
217 2440689 2440883 + NZ_CP042804.1 Pseudomonas amygdali pv. tabaci str. ATCC 11528
218 5552025 5552222 + NC_019695.1 Chroococcidiopsis thermalis PCC 7203
219 2629901 2630095 + NC_004578.1 Pseudomonas syringae pv. tomato str. DC3000
220 1777935 1778132 + NZ_CP059565.1 Neisseria wadsworthii
221 2196803 2196997 + NZ_CP046621.1 Pseudomonas alkylphenolica
222 2127377 2127574 - NZ_LR134313.1 Neisseria canis
223 1636003 1636200 - NZ_CP053351.1 Winogradskyella schleiferi
224 550005 550193 + NZ_LT608328.1 Petrimonas mucosa
225 1738299 1738499 + NC_019780.1 Dactylococcopsis salina PCC 8305
226 1690267 1690464 - NZ_CP053348.1 Winogradskyella forsetii
227 1517243 1517440 - NC_014209.1 Thermoanaerobacter mathranii subsp. mathranii str. A3
228 1535537 1535734 - NC_013921.1 Thermoanaerobacter italicus Ab9
229 2626156 2626353 + NZ_CP022386.1 Capnocytophaga gingivalis
230 459784 459981 + NZ_CP029463.1 Flavobacterium sediminis
231 3983024 3983218 - NZ_CP054205.1 Pseudomonas rhodesiae
232 3863723 3863917 - NZ_CP070503.1 Pseudomonas atacamensis
233 3818792 3818986 - NZ_CP027723.1 Pseudomonas orientalis
234 3988707 3988901 - NZ_CP023272.1 Pseudomonas lurida
235 1474370 1474564 - NZ_CP014262.1 Pseudomonas corrugata
236 4071575 4071769 - NZ_CP010896.1 Pseudomonas simiae
237 2281247 2281441 + NZ_CP029608.1 Pseudomonas kribbensis
238 6143532 6143726 - NZ_CP014205.2 Pseudomonas glycinae
239 4243579 4243773 - NZ_CP027756.1 Pseudomonas synxantha
240 2262006 2262200 + NZ_CP062253.1 Pseudomonas gozinkensis
241 2226818 2227012 + NZ_CP062252.1 Pseudomonas allokribbensis
242 4362843 4363037 - NZ_CP035088.1 Pseudomonas viciae
243 2489379 2489573 + NZ_CP051487.1 Pseudomonas umsongensis
244 6429862 6430056 + NZ_CP048810.1 Pseudomonas bijieensis
245 4397336 4397530 - NZ_CP034725.1 Pseudomonas brassicacearum
246 6282334 6282528 + NZ_CP005960.1 Pseudomonas mandelii JR-1
247 2047713 2047907 + NZ_CP014870.1 Pseudomonas silesiensis
248 2266338 2266532 + NZ_CP061079.1 Pseudomonas chlororaphis
249 4716173 4716367 - NZ_CP018420.1 Pseudomonas veronii
250 4221099 4221293 - NZ_CP012400.2 Pseudomonas yamanorum
251 2375708 2375902 + NZ_LS999205.1 Pseudomonas protegens CHA0
252 7997969 7998163 + NZ_CP025096.1 Spirosoma pollinicola
253 2300653 2300847 - NC_020888.1 Thalassolituus oleivorans MIL-1
254 1373663 1373857 + NC_016940.1 Saprospira grandis str. Lewin
255 2895106 2895300 - NZ_CP016895.1 Acinetobacter larvae
256 3808635 3808829 - NZ_CP043311.1 Pseudomonas lalkuanensis
257 1580280 1580477 + NZ_CP017415.1 Acidihalobacter yilgarnenesis
258 3317281 3317475 - NZ_CP015121.1 Acinetobacter baumannii
259 1451875 1452069 + NC_013037.1 Dyadobacter fermentans DSM 18053
260 4002272 4002466 - NZ_CP020104.1 Spirosoma aerolatum
261 1071952 1072149 + NZ_CP047602.1 Thermoanaerobacterium aotearoense
262 1495106 1495297 + NZ_CP043042.1 Marinobacter fonticola
263 647371 647565 + NZ_CP024632.1 Acinetobacter junii
264 2875251 2875448 - NZ_CP030104.1 Flagellimonas maritima
265 1801048 1801245 - NC_014410.1 Thermoanaerobacterium thermosaccharolyticum DSM 571
266 280023 280208 - NC_016599.1 Owenweeksia hongkongensis DSM 17368
267 2967743 2967937 - NZ_CP032134.1 Acinetobacter chinensis
268 1668787 1668984 + NC_007498.2 Syntrophotalea carbinolica DSM 2380
269 4311968 4312165 - NC_019753.1 Crinalium epipsammum PCC 9333
270 2832916 2833110 - NZ_CP030880.1 Acinetobacter haemolyticus
271 3078798 3078992 - NZ_CP010429.1 Spirosoma radiotolerans
272 144903 145094 + NC_014147.1 Moraxella catarrhalis BBH18
273 637710 637901 + NZ_LR134343.1 Moraxella cuniculi
274 3760994 3761188 + NC_016603.1 Acinetobacter pittii PHEA-2
275 2850092 2850286 - NZ_CP035934.2 Acinetobacter cumulans
276 1416796 1416990 - NZ_CP040105.1 Acinetobacter nosocomialis M2
277 3325443 3325637 - NZ_CP053391.1 Acinetobacter lactucae
278 3437318 3437512 - NZ_CP065820.1 Acinetobacter seifertii
279 6295290 6295484 + NC_015703.1 Runella slithyformis DSM 19594
280 537142 537339 + NZ_CP015519.1 Syntrophotalea acetylenivorans
281 2976062 2976256 - NC_005966.1 Acinetobacter baylyi ADP1
282 2937188 2937382 - NZ_CP053435.1 Spirosoma taeanense
283 4853156 4853347 - NZ_CP021425.1 Oleiphilus messinensis
284 4898967 4899161 - NZ_CP050063.1 Spirosoma aureum
285 2157822 2158019 - NZ_LT906449.1 Capnocytophaga haemolytica
286 2579357 2579551 - NZ_CP071766.1 Acinetobacter towneri
287 2036794 2036988 + NC_012560.1 Azotobacter vinelandii DJ
288 2462629 2462826 - NC_015945.1 Muricauda ruestringensis DSM 13258
289 114561 114752 + NZ_CP011381.2 Moraxella bovoculi
290 118193 118384 + NZ_CP011158.1 Moraxella ovis
291 3572350 3572544 - NC_018691.1 Alcanivorax dieselolei B5
292 109651 109851 - NZ_CP067016.1 Anaerococcus obesiensis
293 1387935 1388135 - NZ_CP066014.1 Anaerococcus vaginalis
294 3793895 3794092 - NZ_CP015756.1 Clostridium estertheticum subsp. estertheticum
295 728029 728226 + NC_015519.1 Tepidanaerobacter acetatoxydans Re1
296 1087963 1088157 + NZ_CP026949.1 Mycetocola zhujimingii
297 405384 405578 + NZ_CP059674.1 Mycoplasma tullyi
298 465728 465922 + NC_018406.1 Mycoplasma gallisepticum VA94_7994-1-7P
299 750117 750311 + NZ_AP014630.1 Acinetobacter guillouiae
300 2640180 2640371 - NZ_CP011494.1 Marinobacter psychrophilus
301 1377270 1377467 - NC_014758.1 Calditerrivibrio nitroreducens DSM 19672
302 1564578 1564775 + NZ_CP061813.1 Polaribacter haliotis
303 2307456 2307650 - NZ_CP004387.1 Alcanivorax pacificus W11-5
304 4005881 4006075 - NZ_CP020105.1 Spirosoma rigui
305 1097758 1097955 + NC_015555.1 Thermoanaerobacterium xylanolyticum LX-11
306 1963990 1964187 - NC_013222.1 Robiginitalea biformata HTCC2501
307 1209233 1209424 + NZ_CP031093.1 Hydrocarboniclastica marina
308 1385487 1385684 - NC_016630.1 Filifactor alocis ATCC 35896
309 198646 198843 - NZ_CP032100.1 Arcobacter suis CECT 7833
310 3822834 3823028 + NC_009664.2 Kineococcus radiotolerans SRS30216 = ATCC BAA-149
311 202052 202249 + NC_014230.1 Croceibacter atlanticus HTCC2559
312 3096893 3097078 - NZ_CP014945.1 Psychrobacter alimentarius
313 2400602 2400796 - NZ_CP030777.1 Faecalibacterium prausnitzii
314 1935740 1935931 - NZ_CP017715.1 Marinobacter salinus
315 3081999 3082190 - NZ_CP020931.1 Marinobacter salarius
316 1103242 1103433 + NC_017506.1 Marinobacter adhaerens HP15
317 2829632 2829817 - NC_007969.1 Psychrobacter cryohalolentis K5
318 314083 314280 - NZ_CP065728.1 Moraxella nonliquefaciens
319 1782707 1782907 - NZ_AP022873.1 Dissulfurispira thermophila
320 1471676 1471873 + NZ_CP017478.1 Urechidicola croceus
321 1905566 1905760 - NZ_AP022601.1 Mycobacterium gallinarum
322 3472087 3472284 + NZ_CP032050.1 Euzebyella marina
323 1779185 1779379 + NZ_CP048602.1 Halomonas piezotolerans
324 1824595 1824789 + NZ_AP022843.1 Halomonas hydrothermalis
325 1882557 1882751 + NZ_CP065135.1 Halomonas venusta
326 1323141 1323341 - NZ_LR215048.1 Acholeplasma axanthum
327 207205 207399 - NZ_CP031219.1 Malaciobacter mytili LMG 24559
328 4723932 4724129 - NC_013132.1 Chitinophaga pinensis DSM 2588
329 175070 175267 - NZ_CP030241.1 Moraxella bovis
330 2346851 2347036 + NZ_LR884459.1 Psychrobacter arenosus
331 690224 690421 - NZ_CP014224.1 Wenyingzhuangia fucanilytica
332 1419489 1419686 + NZ_CP015772.1 Niabella ginsenosidivorans
333 2699665 2699862 - NC_008709.1 Psychromonas ingrahamii 37
334 3167314 3167511 + NZ_CP007202.1 Siansivirga zeaxanthinifaciens CC-SAMT-1
335 3104023 3104217 - NC_002516.2 Pseudomonas aeruginosa PAO1
336 1567805 1567999 + NZ_CP031415.1 Saccharospirillum mangrovi
337 3526398 3526595 - NC_015844.1 Zobellia galactanivorans
338 3290268 3290465 - NC_013960.1 Nitrosococcus halophilus Nc 4
339 2110139 2110336 - NZ_CP010802.1 Desulfuromonas soudanensis
340 1284145 1284330 - NZ_CP012678.1 Psychrobacter urativorans
341 2675909 2676103 + NZ_AP019307.1 Nocardioides baekrokdamisoli
342 1581910 1582107 + NC_007517.1 Geobacter metallireducens GS-15
343 439672 439860 + NC_016621.1 Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu
344 1625271 1625468 - NZ_CP059563.1 Conchiformibius steedae
345 1751870 1752064 - NZ_CP059991.1 Streptomyces gardneri
346 250254 250451 - NZ_CP053840.1 Arcobacter venerupis
347 2278397 2278594 - NZ_LN879430.1 Herbinix luporum
348 1667635 1667829 + NZ_CP009533.1 Pseudomonas rhizosphaerae
349 3568754 3568948 - NZ_CP067022.1 Pseudomonas cannabina pv. alisalensis
350 3432723 3432917 - NZ_CP007039.1 Pseudomonas cichorii JBC1
351 1248407 1248604 + NZ_CP048113.1 Chitinophaga agri
352 238230 238427 - NZ_CP053835.1 Arcobacter defluvii
353 4451817 4452011 - NZ_CP056030.1 Pseudomonas eucalypticola
354 3993341 3993544 - NC_010296.1 Microcystis aeruginosa NIES-843
355 1400406 1400603 + NZ_CP010554.1 Rugosibacter aromaticivorans
356 1950656 1950850 + NZ_CP062158.2 Pseudomonas lundensis
357 4253135 4253329 + NZ_CP015235.1 Rhodococcus fascians D188
358 1722512 1722703 + NC_009633.1 Alkaliphilus metalliredigens QYMF
359 321311 321508 + NZ_CP007035.1 Niabella soli DSM 19437
360 2740031 2740225 - NC_009901.1 Shewanella pealeana ATCC 700345
361 2439942 2440136 + NC_010334.1 Shewanella halifaxensis HAW-EB4
362 2832322 2832519 + NC_018721.1 Psychroflexus torquis ATCC 700755
363 4262161 4262352 - NZ_CP022753.1 Nocardiopsis gilva YIM 90087
364 449610 449807 + NZ_CP042433.1 Flavisolibacter ginsenosidimutans
365 2098968 2099162 - NC_009922.1 Alkaliphilus oremlandii OhILAs
366 731095 731283 + NZ_LR134365.1 Cardiobacterium hominis
367 1888008 1888205 - NZ_CP009788.1 Geobacter pickeringii
368 3256889 3257083 + NZ_CP007142.1 Gynuella sunshinyii YC6258
369 2760517 2760711 + NZ_CP042382.1 Pistricoccus aurantiacus
370 2505729 2505923 + NC_013510.1 Thermomonospora curvata DSM 43183
371 1839630 1839827 - NC_015672.1 Flexistipes sinusarabici DSM 4947
372 209958 210155 - NZ_CP032098.1 Malaciobacter molluscorum LMG 25693
373 800578 800775 + NZ_CP016786.1 Clostridium isatidis
374 1437079 1437276 - NZ_CP016786.1 Clostridium isatidis
375 1615160 1615357 + NZ_CP040924.1 Clostridium thermarum
376 1398434 1398625 - NZ_CP014234.1 Moraxella osloensis
377 1664628 1664825 + NC_002939.5 Geobacter sulfurreducens PCA
378 245775 245972 - NZ_CP042652.1 Pseudoarcobacter acticola
379 2927688 2927885 + NZ_CP071376.1 Clostridium gasigenes
380 3049653 3049850 + NZ_CP071376.1 Clostridium gasigenes
381 211296 211493 - NZ_CP031218.1 Malaciobacter halophilus
382 2588716 2588910 + NC_011566.1 Shewanella piezotolerans WP3
383 2570237 2570431 + NC_009831.1 Shewanella sediminis HAW-EB3
384 2652459 2652653 + NZ_CP037952.1 Parashewanella spongiae
385 3619380 3619577 - NZ_CP023777.1 Chitinophaga caeni
386 2465337 2465522 - NC_007204.1 Psychrobacter arcticus 273-4
387 1945384 1945581 - NZ_CP041637.1 Formosa sediminum
388 314112 314309 - NZ_CP046027.1 Neisseria brasiliensis
389 221673 221870 - NZ_CP032097.1 Arcobacter ellisii
390 308920 309120 - NZ_CP072133.1 Pseudoalteromonas xiamenensis
391 2398498 2398695 + NC_014393.1 Clostridium cellulovorans 743B
392 173825 174022 - NZ_CP030944.1 Arcobacter aquimarinus
393 180202 180399 - NZ_CP053833.1 Arcobacter cloacae
394 3168790 3168987 + NZ_CP023671.1 Clostridium septicum
395 1924375 1924575 - NZ_CP013187.1 Pseudoalteromonas phenolica
396 1552719 1552916 - NC_014220.1 Syntrophothermus lipocalidus DSM 12680
397 1649362 1649559 - NZ_CP027286.1 Clostridium chauvoei
398 3308058 3308255 - NZ_CP028842.1 Clostridium botulinum
399 3551061 3551258 - NZ_CP011663.1 Clostridium sporogenes
400 1321677 1321874 - NZ_CP059569.1 Kingella oralis
401 1791633 1791830 + NZ_CP013019.1 Clostridium pasteurianum
402 3942034 3942231 + NZ_CP025938.1 Tamlana carrageenivorans
403 124980 125177 + NC_016584.1 Desulfosporosinus orientis DSM 765
404 2668614 2668808 + NZ_CP034015.1 Shewanella livingstonensis
405 1620260 1620457 + NZ_CP046670.1 Alteromonas mediterranea
406 1751115 1751312 - NZ_CP014322.1 Alteromonas addita
407 2393658 2393855 - NC_015554.1 Alteromonas naphthalenivorans
408 1992799 1992996 + NC_010814.1 Geobacter lovleyi SZ
409 1668896 1669093 + NZ_CP022278.1 Neisseria chenwenguii
410 1759472 1759669 + NZ_CP008849.1 Alteromonas australica
411 189236 189433 + NC_018017.1 Desulfitobacterium dehalogenans ATCC 51507
412 2009519 2009713 + NC_007954.1 Shewanella denitrificans OS217
413 1282322 1282519 + NC_014614.1 Acetoanaerobium sticklandii
414 435910 436107 + NZ_CP031253.1 Neisseria lactamica
415 2398917 2399111 - NC_008345.1 Shewanella frigidimarina NCIMB 400
416 235888 236085 + NC_011830.1 Desulfitobacterium hafniense DCB-2
417 355248 355445 + NZ_LS483369.1 Neisseria cinerea
418 367329 367526 + NZ_CP039886.1 Neisseria flavescens
419 2246421 2246615 + NZ_CP041036.1 Shewanella polaris
420 1552298 1552495 + NZ_LR134327.1 Aggregatibacter aphrophilus ATCC 33389
421 2218471 2218665 - NZ_CP037951.1 Parashewanella tropica
422 3036751 3036945 - NC_010506.1 Shewanella woodyi ATCC 51908
423 1378719 1378916 - NZ_CP053352.1 Winogradskyella helgolandensis
424 1832313 1832510 - NZ_LR134510.1 Actinobacillus delphinicola
425 1372751 1372948 + NZ_LS483443.1 Aggregatibacter segnis ATCC 33393
426 570973 571170 + NC_010001.1 Lachnoclostridium phytofermentans ISDg
427 2431404 2431598 + NZ_CP022295.1 Nocardioides aromaticivorans
428 2554941 2555135 + NZ_CP009896.1 Pimelobacter simplex
429 2766033 2766227 - NC_015276.1 Marinomonas mediterranea MMB-1
430 1369950 1370147 - NC_014377.1 Thermosediminibacter oceani DSM 16646
431 1895967 1896161 - NC_010718.1 Natranaerobius thermophilus JW/NM-WN-LF
432 2343689 2343883 - NC_009092.1 Shewanella loihica PV-4
433 2105283 2105477 + NZ_CP022272.1 Shewanella marisflavi
434 119835 120032 + NC_018515.1 Desulfosporosinus meridiei DSM 13257
435 15528 15725 + NZ_CP031699.1 Neisseria animalis
436 2262481 2262678 - NZ_CP019419.1 Polaribacter reichenbachii
437 316259 316456 - NZ_CP045696.1 Sodaliphilus pleomorphus
438 280844 281041 + NC_018013.1 Aequorivita sublithincola DSM 14238
439 964794 964991 + NC_008593.1 Clostridium novyi NT
440 16768 16962 - NZ_CP041146.1 Nocardioides humi
441 857823 858020 - NZ_LR130778.1 Petrocella atlantisensis
442 1610228 1610425 + NZ_CP014176.1 Clostridium argentinense
443 791092 791289 - NC_021883.1 Mannheimia haemolytica USMARC_2286
444 2311684 2311881 - NZ_HG917868.1 Clostridium bornimense
445 1278570 1278764 + NZ_CP020559.1 Clostridium formicaceticum
446 1675562 1675759 + NZ_CP017477.1 Polaribacter vadi
447 893027 893224 + NZ_CP007452.1 Peptoclostridium acidaminophilum DSM 3953
448 2871094 2871291 + NC_020291.1 Clostridium saccharoperbutylacetonicum N1-4(HMT)
449 1976204 1976401 - NC_014207.1 Methylotenera versatilis 301
450 1492024 1492221 - NZ_CP009610.1 Haemophilus influenzae
451 1436945 1437142 + NZ_LS483458.1 Haemophilus haemolyticus
452 1578548 1578745 - NZ_LS483429.1 Haemophilus aegyptius
453 1586765 1586959 + NC_015559.1 Marinomonas posidonica IVIA-Po-181
454 679141 679338 + NZ_CP015031.1 Basfia succiniciproducens
455 1038996 1039193 + NC_006300.1 [Mannheimia] succiniciproducens MBEL55E
456 561810 562007 - NZ_CP040863.1 Rodentibacter heylii
457 1610375 1610572 + NZ_LT906463.1 Haemophilus pittmaniae
458 2615572 2615769 + NC_012483.1 Acidobacterium capsulatum ATCC 51196
459 1234001 1234198 + NZ_CP015425.1 [Haemophilus] ducreyi
460 1366941 1367138 - NZ_CP016604.1 Otariodibacter oris
461 1202708 1202905 - NZ_CP016605.1 Bisgaardia hudsonensis
462 774113 774310 - NZ_CP006944.1 Mannheimia varigena USDA-ARS-USMARC-1312
463 1981910 1982107 - NZ_CP015029.1 Frederiksenia canicola
464 1820891 1821088 + NZ_CP046531.1 Mannheimia ovis
465 1888492 1888689 + NZ_CP055305.1 Mannheimia pernigra
466 1773058 1773255 - NZ_LR134167.1 Avibacterium volantium
467 1424416 1424613 - NZ_CP029206.1 Actinobacillus porcitonsillarum
468 1898176 1898373 - NC_011852.1 Glaesserella parasuis SH0165
469 2110077 2110274 - NZ_CP028926.1 Pasteurella multocida
470 758241 758438 + NZ_LT906448.1 Pasteurella dagmatis
471 250078 250275 + NZ_CP030753.1 Actinobacillus pleuropneumoniae
472 660395 660592 + NZ_CP006954.1 Bibersteinia trehalosi USDA-ARS-USMARC-188
473 378480 378677 + NZ_CP007715.1 Actinobacillus equuli subsp. equuli
474 368780 368977 + NZ_CP009159.1 Actinobacillus suis ATCC 33415
475 140219 140416 + NC_018068.1 Desulfosporosinus acidiphilus SJ4
476 45773 45967 + NZ_CP053842.1 Campylobacter corcagiensis
477 1958933 1959130 + NZ_CP061280.1 Mannheimia bovis
478 1125851 1126048 + NZ_CP018804.1 Histophilus somni
479 1785426 1785620 + NZ_CP061941.1 Marinomonas algicola
480 422749 422946 + NC_014378.1 Acetohalobium arabaticum DSM 5501
481 1347800 1347997 + NZ_CP007514.1 Rubrobacter radiotolerans
482 327357 327551 - NZ_CP019343.1 Oceanicoccus sagamiensis
483 1522290 1522484 + NZ_CP014544.1 Zhongshania aliphaticivorans
484 3908684 3908881 - NZ_CP042434.1 Arachidicoccus ginsenosidivorans
485 2002525 2002722 - NZ_LR590481.1 Hathewaya histolytica
486 1685301 1685495 + NZ_CP054301.1 Marinomonas primoryensis
487 3741402 3741596 + NZ_CP070273.1 Marinomonas foliarum
488 2116044 2116241 - NZ_CP017253.2 Clostridium taeniosporum
489 476234 476431 + NZ_CP016180.1 Pasteurella skyensis
490 489762 489950 + NZ_LT615228.1 Polynucleobacter necessarius
491 1486745 1486939 + NZ_CP036422.1 Halioglobus maricola
492 2452802 2452999 + NZ_CP032489.1 Arachidicoccus soli
493 1204705 1204902 + NZ_CP007031.1 Marichromatium purpuratum 984
494 2161387 2161587 - NZ_CP011025.1 Pseudoalteromonas arctica A 37-1-2
495 1660953 1661153 + NZ_CP027523.1 Pseudoalteromonas carrageenovora
496 3957601 3957801 - NZ_CP019628.1 Pseudoalteromonas aliena
497 3623271 3623468 - NZ_CP023706.1 Edwardsiella tarda
498 1947087 1947284 - NZ_CP016043.1 Edwardsiella hoshinae
499 1818250 1818447 + NC_012779.2 Edwardsiella ictaluri 93-146
500 3870959 3871156 - NZ_CP006664.1 Edwardsiella anguillarum ET080813
501 9952 10146 - NZ_AP022847.1 Nitrosophilus alvini
502 2507604 2507801 - NZ_CP034036.1 Brenneria nigrifluens DSM 30175 = ATCC 13028
503 2381381 2381578 - NZ_CP006569.1 Sodalis praecaptivus
504 1289018 1289215 + NZ_CP031115.1 Rubrobacter indicoceani
505 571393 571590 - NZ_CP011078.1 Yersinia ruckeri
506 1900691 1900888 + NZ_LR134373.1 Yersinia pseudotuberculosis
507 1644862 1645059 + NZ_CP032487.1 Yersinia hibernica
508 1813170 1813367 - NZ_CP067057.1 Rahnella aceris
509 4341193 4341390 - NZ_CP007230.1 Yersinia similis
510 610138 610311 + NC_011899.1 Halothermothrix orenii H 168
511 450741 450929 - NC_013894.1 Thermocrinis albus DSM 14484
512 1145052 1145246 + NZ_CP007028.1 Thermocrinis ruber
513 988831 989034 - NZ_CP020414.2 Leptospira interrogans serovar Copenhageni
514 2880269 2880472 - NZ_CP026671.1 Leptospira borgpetersenii serovar Ceylonica
515 3603751 3603954 - NZ_CP030142.1 Leptospira mayottensis
516 3463034 3463237 + NZ_CP033614.1 Leptospira kmetyi
517 1858317 1858520 + NZ_CP040840.1 Leptospira weilii
518 1160237 1160440 + NZ_CP015217.1 Leptospira tipperaryensis
519 1418256 1418450 - NC_007503.1 Carboxydothermus hydrogenoformans Z-2901
520 2094620 2094817 - NC_019978.1 Halobacteroides halobius DSM 5150
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_CP032382.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF00587.27 0.78 404 682 same-strand tRNA synthetase class II core domain (G, H, P, S and T)
2 PF03129.22 0.78 403 682 same-strand Anticodon binding domain
3 PF07973.16 0.78 403 684 same-strand Threonyl and Alanyl tRNA synthetase second additional domain
4 PF02824.23 0.73 378 687 same-strand TGS domain
5 PF00707.24 0.9 467 90.0 same-strand Translation initiation factor IF-3, C-terminal domain
6 PF00453.20 0.99 514 52.0 same-strand Ribosomal protein L20
++ More..