ProsmORF-pred
Result : Q6NJ84
Protein Information
Information Type Description
Protein name 50S ribosomal protein L30
NCBI Accession ID BX248355.1
Organism Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis)
Left 147792
Right 147977
Strand +
Nucleotide Sequence ATGGCCCTGAAGATTACCCAGCACAAGGGTTTGGTTGGCGCTAACCCAAAGCAGCGTAAGAACATGGCTGCTCTTGGCCTGAAGCACATCAACCACTCCGTAGTACACCAAGACACCCCAGTCGTTCGCGGCATGGTCAATGTGGTTCGCCACATGGTGTCTGTTGAAGAAGTGGCAGGGGAGTAA
Sequence MALKITQHKGLVGANPKQRKNMAALGLKHINHSVVHQDTPVVRGMVNVVRHMVSVEEVAGE
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl00203. Profile Description: N/A. This family includes prokaryotic L30 and eukaryotic L7.
Pubmed ID 14602910
Domain CDD:412218
Functional Category Ribosomal_protein
Uniprot ID Q6NJ84
ORF Length (Amino Acid) 61
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 543
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 443997 444182 + NZ_LN831026.1 Corynebacterium diphtheriae
2 502074 502259 + NZ_LR738855.1 Corynebacterium rouxii
3 1926557 1926742 + NZ_LT906443.1 Corynebacterium ulcerans
4 387380 387565 + NC_017301.2 Corynebacterium pseudotuberculosis C231
5 368716 368901 + NZ_CP011312.1 Corynebacterium kutscheri
6 527796 527981 + NZ_CP011542.1 Corynebacterium mustelae
7 499815 500000 + NZ_CP004353.1 Corynebacterium vitaeruminis DSM 20294
8 420755 420940 + NZ_CP026947.1 Corynebacterium yudongzhengii
9 449485 449670 + NZ_CP011545.1 Corynebacterium testudinoris
10 560913 561098 + NZ_CP006764.1 Corynebacterium doosanense CAU 212 = DSM 45436
11 1968370 1968555 - NZ_CP033898.1 Corynebacterium pseudopelargi
12 508786 508971 + NZ_LR698967.1 Corynebacterium ammoniagenes
13 556362 556547 + NC_020302.1 Corynebacterium halotolerans YIM 70093 = DSM 44683
14 1979869 1980054 - NZ_CP035299.1 Corynebacterium pelargi
15 486663 486848 + NZ_CP010827.1 Corynebacterium singulare
16 378559 378744 + NZ_CP011546.1 Corynebacterium uterequi
17 1895692 1895877 - NZ_CP033897.1 Corynebacterium gerontici
18 448865 449050 + NZ_CP039247.1 Corynebacterium endometrii
19 1109050 1109235 - NZ_CP014635.1 Corynebacterium simulans
20 466721 466906 + NC_012590.1 Corynebacterium aurimucosum ATCC 700975
21 2237826 2238011 - NZ_CP067012.1 Corynebacterium kefirresidentii
22 766462 766647 - NZ_CP068161.1 Corynebacterium propinquum
23 2286284 2286469 - NZ_LS483460.1 Corynebacterium minutissimum
24 506501 506686 + NZ_CP009251.1 Corynebacterium stationis
25 489067 489252 + NZ_CP009246.1 Corynebacterium flavescens
26 2272350 2272535 - NZ_CP009249.1 Corynebacterium phocae
27 396853 397038 + NZ_CP007790.1 Corynebacterium marinum DSM 44953
28 2096104 2096289 - NC_012704.1 Corynebacterium kroppenstedtii DSM 44385
29 380767 380952 + NZ_CP011311.1 Corynebacterium camporealensis
30 1873489 1873674 - NZ_CP046883.1 Corynebacterium anserum
31 578946 579131 + NZ_CP015622.1 Corynebacterium crudilactis
32 831495 831680 + NZ_CP006842.1 Corynebacterium glyciniphilum AJ 3170
33 2208980 2209165 - NC_015673.1 Corynebacterium resistens DSM 45100
34 2195136 2195321 - NC_021663.1 Corynebacterium terpenotabidum Y-11
35 1307375 1307560 + NZ_LS483464.1 Corynebacterium renale
36 450717 450902 + NZ_CP008944.1 Corynebacterium atypicum
37 417708 417893 + NZ_CP011541.1 Corynebacterium epidermidicanis
38 559996 560181 + NC_021915.1 Corynebacterium maris DSM 45190
39 500754 500939 + NZ_CP009247.1 Corynebacterium frankenforstense DSM 45800
40 639863 640042 + NZ_LS483459.1 Corynebacterium jeikeium
41 523410 523580 + NC_015564.1 Hoyosella subflava DQS3-9A1
42 7622885 7623067 - NC_009142.1 Saccharopolyspora erythraea NRRL 2338
43 4328050 4328232 - NZ_CP045929.1 Saccharopolyspora coralli
44 2923503 2923688 + NZ_CP042429.1 Corynebacterium nuruki S6-4
45 442986 443171 + NZ_CP009245.1 Corynebacterium aquilae DSM 44791
46 501209 501394 + NZ_LT906467.1 Corynebacterium imitans
47 402443 402628 + NZ_CP019688.1 Corynebacterium glaucum
48 587116 587301 + NC_004369.1 Corynebacterium efficiens YS-314
49 578420 578605 + NZ_CP009220.1 Corynebacterium deserti GIMN1.010
50 2011951 2012133 + NZ_CP065682.1 Brevibacterium casei
51 1642829 1642981 + NZ_CP034248.1 Paenibacillus lentus
52 1540017 1540196 - NZ_CP070228.1 Arcanobacterium phocisimile
53 702887 703066 + NZ_LS483427.1 Arcanobacterium haemolyticum
54 3911220 3911402 - NC_013441.1 Gordonia bronchialis DSM 43247
55 471010 471195 - NZ_CP038157.1 Corynebacterium sanguinis
56 551867 552052 + NC_020506.1 Corynebacterium callunae DSM 20147
57 323324 323509 + NZ_CP009215.1 Corynebacterium ureicelerivorans
58 733459 733644 + NZ_AP017369.1 Corynebacterium suranareeae
59 285545 285730 + NC_022198.1 Corynebacterium argentoratense DSM 44202
60 1253254 1253427 - NZ_AP019735.1 Alistipes communis
61 2514891 2515058 + NZ_AP022595.1 Mycolicibacterium sarraceniae
62 1280739 1280921 + NZ_CP025333.1 Brevibacterium aurantiacum
63 3154578 3154760 + NZ_CP035810.1 Brevibacterium luteolum
64 2981697 2981873 - NZ_AP022575.1 Mycobacterium shinjukuense
65 2069192 2069377 - NZ_LT906473.1 Corynebacterium cystitidis
66 4500605 4500826 + NZ_AP022569.1 Mycobacterium cookii
67 411596 411781 + NZ_CP014782.1 Shewanella psychrophila
68 385562 385747 + NZ_CP026948.1 Corynebacterium liangguodongii
69 368886 369071 + NZ_CP009248.1 Corynebacterium sphenisci DSM 44792
70 3590954 3591133 + NC_010554.1 Proteus mirabilis HI4320
71 4746255 4746440 - NC_014012.1 Shewanella violacea DSS12
72 2099843 2100028 + NC_011566.1 Shewanella piezotolerans WP3
73 5276141 5276305 - NC_009831.1 Shewanella sediminis HAW-EB3
74 1264493 1264660 - NZ_AP022596.1 Mycolicibacterium helvum
75 5541635 5541799 - NZ_CP022088.2 Nocardia brasiliensis
76 218955 219140 + NC_009901.1 Shewanella pealeana ATCC 700345
77 1682748 1682933 - NZ_AP012322.1 Bifidobacterium angulatum DSM 20098 = JCM 7096
78 1422720 1422893 + NZ_AP022618.1 Mycolicibacterium insubricum
79 3729197 3729367 + NZ_CP035492.1 Paenibacillus protaetiae
80 2137571 2137756 + NZ_CP068168.1 Corynebacterium amycolatum
81 1168559 1168741 - NZ_CP062938.1 Bifidobacterium eulemuris
82 1689800 1689982 + NZ_CP062948.1 Bifidobacterium lemurum
83 5016367 5016552 - NC_010334.1 Shewanella halifaxensis HAW-EB4
84 638207 638386 + NZ_CP012117.1 Dermabacter vaginalis
85 3977582 3977767 - NC_016906.1 Gordonia polyisoprenivorans VH2
86 431285 431473 + NZ_CP034015.1 Shewanella livingstonensis
87 179085 179273 + NC_008345.1 Shewanella frigidimarina NCIMB 400
88 80057 80218 + NZ_CP039457.1 Streptococcus pasteurianus
89 1712244 1712423 + NZ_CP026364.1 Proteus hauseri
90 142885 143064 + NZ_CP047349.1 Proteus terrae subsp. cibarius
91 4037508 4037663 - NZ_CP019066.1 Tsukamurella tyrosinosolvens
92 1216336 1216518 + NZ_CP026734.1 Brevibacterium linens
93 2194640 2194813 - NZ_AP022603.1 Mycolicibacterium fallax
94 878650 878811 + NZ_CP054015.1 Streptococcus gallolyticus
95 6309284 6309460 - NZ_CP048209.1 Paenibacillus lycopersici
96 5494139 5494321 + NZ_CP033972.1 Gordonia insulae
97 114364 114525 + NZ_LS483343.1 Streptococcus ferus
98 321476 321634 + NC_013216.1 Desulfofarcimen acetoxidans DSM 771
99 5850771 5850929 - NZ_CP020809.1 Mycobacterium dioxanotrophicus
100 138571 138753 + NZ_CP024848.1 Oceanobacillus zhaokaii
101 887164 887322 - NZ_CP008802.1 Actinotignum schaalii
102 4990179 4990358 - NZ_CP059694.1 Gordonia rubripertincta
103 3295107 3295286 - NZ_CP011853.1 Gordonia phthalatica
104 2114386 2114565 + NZ_CP027114.1 Gordonia alkanivorans
105 621863 622048 - NZ_CP009312.1 Lawsonella clevelandensis
106 4226396 4226572 + NZ_CP048286.1 Paenibacillus rhizovicinus
107 475564 475746 - NZ_CP015079.1 Nocardioides dokdonensis FR1436
108 3423893 3424075 - NZ_CP027433.1 Gordonia iterans
109 4550529 4550711 - NZ_CP022752.1 Actinopolyspora erythraea
110 318917 319102 + NC_019897.1 Thermobacillus composti KWC4
111 7130650 7130808 + NZ_CP031142.1 Saccharopolyspora pogona
112 677324 677485 + NZ_CP043405.1 Streptococcus ratti
113 375783 375941 - NC_014246.1 Mobiluncus curtisii ATCC 43063
114 553456 553611 - NZ_AP022606.1 Mycobacterium branderi
115 569087 569263 - NZ_LR134476.1 Trueperella bialowiezensis
116 1054886 1055041 + NZ_LT906483.1 Mycolicibacterium thermoresistibile
117 5299595 5299777 - NZ_CP037952.1 Parashewanella spongiae
118 2846107 2846265 - NZ_CP061007.1 Saccharopolyspora spinosa
119 1835135 1835296 - NC_017581.1 Streptococcus thermophilus JIM 8232
120 2590037 2590213 + NZ_CP034438.1 Flaviflexus salsibiostraticola
121 1366348 1366530 - NZ_CP018622.1 Virgibacillus dokdonensis
122 2686410 2686568 - NZ_AP022576.1 Mycobacterium florentinum
123 4856650 4856832 + NZ_CP013738.1 Streptomyces globisporus C-1027
124 1401082 1401267 + NZ_LR027382.1 Alistipes megaguti
125 977092 977262 + NZ_AP023396.1 Nocardia wallacei
126 3893568 3893750 - NZ_CP059164.1 Nocardioides ungokensis
127 90340 90501 + NZ_CP031733.1 Streptococcus chenjunshii
128 4426501 4426659 - NZ_CP023147.1 Mycobacterium marseillense
129 4547852 4548010 - NC_016946.1 Mycobacterium intracellulare ATCC 13950
130 4681644 4681802 - NC_016948.1 Mycobacterium paraintracellulare
131 621093 621242 + NZ_AP012331.1 Bifidobacterium scardovii JCM 12489 = DSM 13734
132 6054271 6054453 + NZ_CP022744.1 Streptomyces lincolnensis
133 1896028 1896213 - NZ_CP006712.1 Bifidobacterium breve JCM 7017
134 2926458 2926616 - NZ_AP022587.1 Mycobacterium stomatepiae
135 221509 221685 - NZ_CP034437.1 Paenibacillus albus
136 4135309 4135488 + NZ_CP044399.1 Moritella marina ATCC 15381
137 176439 176621 + NZ_CP022272.1 Shewanella marisflavi
138 187746 187928 + NC_009092.1 Shewanella loihica PV-4
139 1988034 1988219 - NZ_CP026999.1 Bifidobacterium longum
140 5681707 5681889 + NZ_AP023440.1 Streptomyces glomeroaurantiacus
141 5622044 5622226 + NZ_CP023694.1 Streptomyces coeruleorubidus
142 4430792 4430974 - NZ_CP041036.1 Shewanella polaris
143 3477722 3477901 - NC_013961.1 Erwinia amylovora CFBP1430
144 3524361 3524540 - NC_010694.1 Erwinia tasmaniensis Et1/99
145 4582637 4582816 - NC_014306.1 Erwinia billingiae Eb661
146 4009744 4009926 - NZ_CP037951.1 Parashewanella tropica
147 2991390 2991572 + NZ_CP047156.1 Epidermidibacterium keratini
148 2890540 2890722 - NZ_AP022609.1 Mycolicibacter hiberniae
149 6059558 6059734 + NZ_AP019308.1 Paenibacillus baekrokdamisoli
150 1391015 1391200 - NZ_CP006018.1 Bifidobacterium indicum LMG 11587 = DSM 20214
151 1428143 1428328 - NZ_CP007287.1 Bifidobacterium coryneforme
152 2223481 2223663 + NZ_AP019307.1 Nocardioides baekrokdamisoli
153 3486266 3486454 - NC_012669.1 Beutenbergia cavernae DSM 12333
154 2983075 2983257 + NZ_CP038012.1 Sporosarcina pasteurii
155 156934 157113 + NZ_CP034035.1 Brenneria rubrifaciens
156 857683 857847 + NC_006361.1 Nocardia farcinica IFM 10152
157 81670 81831 + NC_012924.1 Streptococcus suis SC84
158 4965182 4965364 + NC_021177.1 Streptomyces fulvissimus DSM 40593
159 3991120 3991278 - NZ_AP022612.1 Mycolicibacterium confluentis
160 1157150 1157308 + NZ_CP018044.1 Bifidobacterium choerinum
161 852959 853123 + NZ_CP018082.1 Nocardia mangyaensis
162 94504 94665 + NZ_LS483383.1 Streptococcus cristatus ATCC 51100
163 444137 444298 - NZ_CP032620.1 Streptococcus koreensis
164 5202444 5202629 + NZ_AP022582.1 Mycobacterium seoulense
165 777668 777859 + NZ_CP011883.2 Mycobacterium haemophilum DSM 44634
166 438666 438848 + NZ_CP017560.1 Sporosarcina ureilytica
167 3052008 3052190 + NZ_CP007451.1 Draconibacterium orientale
168 828987 829169 + NZ_CP051486.1 Streptomyces pratensis
169 5453171 5453353 + NZ_CP015098.1 Streptomyces qaidamensis
170 2954817 2954978 - NZ_CP045875.1 Heliorestis convoluta
171 2174896 2175054 + NZ_CP014699.1 Streptococcus pantholopis
172 2744229 2744411 - NZ_CP031194.1 Streptomyces paludis
173 4356282 4356464 + NZ_CP015866.1 Streptomyces parvulus
174 815017 815190 + NC_000962.3 Mycobacterium tuberculosis H37Rv
175 830209 830382 + NC_015848.1 Mycobacterium canettii CIPT 140010059
176 3670134 3670310 - NZ_AP022581.1 Mycobacterium lacus
177 2730483 2730650 + NZ_AP022583.1 Mycobacterium noviomagense
178 70939 71100 + NZ_LS483403.1 Streptococcus lutetiensis
179 3325509 3325691 - NC_010572.1 Streptomyces griseus subsp. griseus NBRC 13350
180 4838048 4838200 - NZ_CP045293.1 Paenibacillus guangzhouensis
181 3981543 3981749 - NZ_AP024310.1 Mycobacterium heckeshornense
182 5002788 5002970 + NZ_AP022619.1 Mycobacterium paraseoulense
183 1696676 1696831 + NZ_AP022570.1 Mycolicibacterium poriferae
184 4657728 4657910 + NZ_CP024957.1 Streptomyces cavourensis
185 274990 275169 + NZ_CP011366.1 Salinicoccus halodurans
186 701793 701960 + NC_013530.1 Xylanimonas cellulosilytica DSM 15894
187 301057 301224 + NZ_CP026923.1 Pontimonas salivibrio
188 983702 983878 - NZ_CP007519.1 Trueperella pyogenes
189 5258637 5258819 + NZ_CP021978.1 Streptomyces hawaiiensis
190 1755639 1755800 - NZ_LS483436.1 Streptococcus intermedius
191 2029754 2029915 - NZ_LR594049.1 Streptococcus gordonii
192 487238 487417 + NZ_CP006569.1 Sodalis praecaptivus
193 4993668 4993850 + NZ_CP020563.1 Kitasatospora albolonga
194 2529554 2529733 + NZ_CP011078.1 Yersinia ruckeri
195 4933100 4933279 - NZ_LR134494.1 Serratia quinivorans
196 4881872 4882054 + NZ_CP070242.1 Streptomyces californicus
197 4941677 4941859 + NZ_CP020570.1 Streptomyces violaceoruber
198 1548068 1548229 + NC_015681.1 Thermodesulfatator indicus DSM 15286
199 705833 705994 + NC_016148.1 Thermovirga lienii DSM 17291
200 1427402 1427587 + NC_013739.1 Conexibacter woesei DSM 14684
201 3045276 3045458 - NZ_CP023702.1 Streptomyces nitrosporeus
202 5986100 5986264 - NZ_CP041695.1 Nocardia otitidiscaviarum
203 1698065 1698253 - NZ_AP022568.1 Mycobacterium simiae
204 2586326 2586505 - NZ_CP009787.1 Yersinia rohdei
205 3011464 3011643 + NZ_CP009781.1 Yersinia aldovae 670-83
206 1572057 1572236 + NZ_CP054043.1 Yersinia mollaretii ATCC 43969
207 315790 315969 + NZ_LR134373.1 Yersinia pseudotuberculosis
208 4360559 4360738 - NZ_CP043727.1 Yersinia canariae
209 340408 340587 + NZ_CP011118.1 Yersinia enterocolitica
210 4374649 4374828 - NZ_CP032487.1 Yersinia hibernica
211 1260267 1260446 - NZ_CP007230.1 Yersinia similis
212 144837 145016 + NZ_CP046293.1 Yersinia intermedia
213 2712890 2713066 - NZ_AP019651.1 Vibrio taketomensis
214 3100348 3100524 + NZ_CP014035.2 Vibrio fluvialis
215 2698216 2698392 - NZ_CP016414.1 Vibrio scophthalmi
216 3188309 3188485 + NZ_AP019657.1 Vibrio ponticus
217 117310 117486 - NZ_CP040990.1 Vibrio furnissii
218 3207216 3207398 - NZ_CP023701.1 Streptomyces subrutilus
219 4771233 4771415 + NZ_CP012382.1 Streptomyces ambofaciens ATCC 23877
220 3937013 3937195 - NZ_CP032427.1 Streptomyces griseorubiginosus
221 155756 155938 + NZ_CP017962.1 Virgibacillus halodenitrificans
222 274224 274385 + NZ_CP071325.1 Photobacterium ganghwense
223 8664491 8664661 - NZ_CP016174.1 Amycolatopsis orientalis
224 1651791 1651976 - NZ_CP032788.1 Corynebacterium xerosis
225 2632948 2633130 - NZ_CP065253.1 Streptomyces clavuligerus
226 3913288 3913470 + NZ_CP017316.1 Streptomyces rubrolavendulae
227 4075180 4075362 + NZ_CP023696.1 Streptomyces fradiae ATCC 10745 = DSM 40063
228 2849354 2849530 - NZ_CP032093.1 Vibrio alfacsensis
229 2615975 2616151 - NZ_CP009977.1 Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
230 284313 284489 + NZ_CP030788.1 Vibrio campbellii
231 2992097 2992273 - NZ_CP031781.1 Vibrio parahaemolyticus
232 2818486 2818662 - NZ_CP018312.1 Vibrio rotiferianus
233 1539795 1539971 - NZ_CP019959.1 Vibrio owensii
234 1952275 1952451 - NZ_CP025792.1 Vibrio jasicida 090810c
235 112084 112263 + NZ_CP015581.1 Tatumella citrea
236 1853312 1853473 - NZ_LR134275.1 Streptococcus vestibularis
237 323222 323401 + NZ_CP065534.1 Lonsdalea populi
238 742974 743153 - NZ_CP023009.1 Lonsdalea britannica
239 409518 409697 + NZ_CP061511.1 Mixta calida
240 481113 481292 + NZ_CP042220.2 Dickeya poaceiphila
241 4039416 4039595 - NZ_LT615367.1 Dickeya aquatica
242 484136 484315 + NZ_CP026377.1 Mixta gaviniae
243 399884 400063 + NZ_AP023184.1 Buttiauxella agrestis
244 396214 396393 + NZ_CP054058.1 Scandinavium goeteborgense
245 4251178 4251357 - NZ_CP050150.1 Hafnia alvei
246 4233100 4233279 + NZ_CP028271.1 Mixta intestinalis
247 4183222 4183401 - NZ_CP025799.1 Dickeya zeae
248 244818 244997 + NZ_LR134201.1 Cedecea lapagei
249 4228356 4228535 - NZ_CP038498.1 Pectobacterium punjabense
250 384381 384560 + NC_012912.1 Dickeya chrysanthemi Ech1591
251 2143420 2143599 + NZ_CP047495.1 Pectobacterium brasiliense
252 493264 493443 + NZ_CP034036.1 Brenneria nigrifluens DSM 30175 = ATCC 13028
253 485199 485378 + NZ_CP051652.1 Pectobacterium carotovorum
254 4383129 4383308 - NC_014500.1 Dickeya dadantii 3937
255 4398256 4398435 - NZ_CP009125.1 Pectobacterium atrosepticum
256 526250 526429 + NZ_CP065044.1 Pectobacterium aroidearum
257 4388797 4388976 - NZ_CP034938.1 Pectobacterium odoriferum
258 3201603 3201782 - NZ_CP017482.1 Pectobacterium polaris
259 4741471 4741650 + NZ_CP015749.1 Pectobacterium parmentieri
260 1129981 1130160 - NZ_CP015750.1 Pectobacterium wasabiae CFBP 3304
261 3322812 3322991 + NZ_CP009460.1 Dickeya fangzhongdai
262 240296 240475 + NZ_CP023525.1 Cedecea neteri
263 4805041 4805220 + NZ_CP014137.1 Brenneria goodwinii
264 3510601 3510768 + NZ_CP035495.1 Xylanimonas allomyrinae
265 3531008 3531163 - NZ_AP022563.1 Mycolicibacterium duvalii
266 4626651 4626833 + NZ_CP010849.1 Streptomyces cyaneogriseus subsp. noncyanogenus
267 1817958 1818116 + NZ_CP040635.1 Acidipropionibacterium jensenii
268 3317516 3317674 - NZ_AP022614.1 Mycobacterium parmense
269 3606461 3606640 - NZ_CP034148.1 Pantoea agglomerans
270 464954 465133 + NZ_CP045720.1 Pantoea eucalypti
271 475060 475239 + NZ_CP038853.1 Pantoea vagans
272 2442153 2442332 - NZ_CP049115.1 Pantoea stewartii
273 463655 463834 + NC_017554.1 Pantoea ananatis PA13
274 2420110 2420271 + NZ_CP043474.1 Mycobacterium grossiae
275 2274087 2274263 - NZ_CP035688.1 Vibrio metoecus
276 2175483 2175659 + NZ_CP046793.1 Vibrio metschnikovii
277 2616333 2616509 - NZ_AP014524.1 Vibrio cholerae MS6
278 3482446 3482625 - NZ_FO704551.1 Xenorhabdus poinarii G6
279 4058544 4058723 - NC_013892.1 Xenorhabdus bovienii SS-2004
280 3161782 3161961 - NZ_CP060401.1 Xenorhabdus nematophila
281 4098451 4098630 - NZ_LS483422.1 Providencia heimbachae
282 4188415 4188594 - NZ_CP072455.1 Xenorhabdus budapestensis
283 3157313 3157492 - NZ_CP016176.1 Xenorhabdus hominickii
284 6312428 6312610 + NZ_CP034463.1 Streptomyces aquilus
285 1643423 1643584 + NZ_LN831039.1 Mycolicibacterium smegmatis
286 6739809 6739970 - NZ_CP012150.1 Mycobacterium goodii
287 4048472 4048651 + NZ_LS483468.1 Rhodococcus coprophilus
288 4687620 4687802 + NZ_CP023695.1 Streptomyces alboniger
289 259283 259459 + NZ_CP009354.1 Vibrio tubiashii ATCC 19109
290 2458500 2458685 + NZ_CP053564.1 Pseudonocardia broussonetiae
291 407481 407663 + NC_013159.1 Saccharomonospora viridis DSM 43017
292 492014 492190 + NZ_CP009467.1 Vibrio harveyi
293 3541891 3542073 - NZ_LN831790.1 Streptomyces leeuwenhoekii
294 84909 85067 + NZ_LR134512.1 Streptococcus agalactiae
295 846670 846852 - NZ_CP038436.1 Nocardioides seonyuensis
296 1338749 1338937 + NZ_CP022295.1 Nocardioides aromaticivorans
297 149896 150066 + NC_004193.1 Oceanobacillus iheyensis HTE831
298 4784176 4784358 + NZ_CP023703.1 Streptomyces galilaeus
299 5051181 5051336 + NZ_AP022616.1 Mycolicibacterium phocaicum
300 2195478 2195633 - NZ_AP022577.1 Mycolicibacterium aubagnense
301 4694783 4694938 - NZ_CP062008.1 Mycolicibacterium mucogenicum DSM 44124
302 3552769 3552951 - NC_016109.1 Kitasatospora setae KM-6054
303 4092862 4093041 - NZ_CP048796.1 Providencia vermicola
304 978104 978283 + NZ_CP029736.1 Providencia rettgeri
305 3560629 3560808 - NZ_CP031123.2 Providencia huaxiensis
306 204841 205023 + NC_007954.1 Shewanella denitrificans OS217
307 5734319 5734498 + NZ_CP023690.1 Streptomyces spectabilis
308 1504645 1504806 + NZ_CP011269.1 Mycolicibacterium fortuitum
309 3120919 3121101 - NZ_CP023692.1 Streptomyces vinaceus
310 3457479 3457661 + NZ_CP008876.1 Terribacillus goriensis
311 240340 240495 - NZ_AP022598.1 Mycolicibacterium parafortuitum
312 5647790 5647972 - NC_010506.1 Shewanella woodyi ATCC 51908
313 5606261 5606443 + NZ_CP022685.1 Streptomyces formicae
314 6407618 6407779 - NZ_AP022579.1 Mycolicibacterium boenickei
315 2935636 2935812 - NZ_LT960611.1 Vibrio tapetis subsp. tapetis
316 2484749 2484928 + NZ_AP022588.1 Mycolicibacterium sediminis
317 82904 83065 + NZ_AP018400.1 Streptococcus ruminantium
318 3773015 3773194 - NZ_LT906450.1 Rhodococcus rhodochrous
319 4094153 4094332 - NZ_CP023689.1 Streptomyces chartreusis
320 614769 614948 + NZ_CP005974.1 Photobacterium gaetbulicola Gung47
321 1231305 1231493 + NZ_CP025546.1 Mycobacterium paragordonae
322 3976474 3976653 - NZ_CP027793.1 Rhodococcus hoagii
323 3490889 3491044 - NC_014158.1 Tsukamurella paurometabola DSM 20162
324 4888845 4889027 + NZ_CP020700.1 Streptomyces tsukubensis
325 971425 971598 + NZ_AP018164.1 Mycobacterium shigaense
326 3688868 3689050 + NZ_CP032229.1 Streptomyces seoulensis
327 78857 79018 + NZ_LR594046.1 Streptococcus dysgalactiae
328 4556109 4556291 + NZ_AP023439.1 Streptomyces tuirus
329 3295825 3296007 - NZ_CP072827.1 Streptomyces mobaraensis NBRC 13819 = DSM 40847
330 4163394 4163576 - NZ_CP023699.1 Streptomyces kanamyceticus
331 3803608 3803787 + NZ_CP027107.1 Cronobacter sakazakii
332 230864 231043 + NZ_CP013940.1 Cronobacter malonaticus LMG 23826
333 3882890 3883069 - NZ_CP012257.1 Cronobacter universalis NCTC 9529
334 3960245 3960424 - NZ_CP012264.1 Cronobacter condimenti 1330
335 84846 85025 + NZ_CP012268.1 Cronobacter muytjensii ATCC 51329
336 4050134 4050313 - NZ_CP012266.1 Cronobacter dublinensis subsp. dublinensis LMG 23823
337 1437942 1438121 - NZ_CP053416.1 Salmonella bongori
338 412271 412450 + NZ_CP035129.1 Kosakonia cowanii
339 4172192 4172371 - NZ_CP012871.1 [Enterobacter] lignolyticus
340 4342912 4343091 - NC_009792.1 Citrobacter koseri ATCC BAA-895
341 3834510 3834689 + NZ_CP038469.1 Citrobacter tructae
342 3587811 3587990 - NC_003197.2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
343 2689127 2689306 - NZ_CP016337.1 Kosakonia sacchari
344 4439188 4439367 - NZ_CP063425.1 Kosakonia pseudosacchari
345 2836125 2836304 + NZ_CP044098.1 Citrobacter portucalensis
346 2246569 2246748 - NZ_CP033744.1 Citrobacter freundii
347 3565553 3565732 + NZ_CP045300.1 Kosakonia arachidis
348 1661410 1661589 + NZ_LT556085.1 Citrobacter amalonaticus
349 707841 708020 - NZ_CP040428.1 Jejubacter calystegiae
350 432689 432868 + NZ_LR134475.1 Klebsiella aerogenes
351 428885 429064 + NZ_CP065838.1 Klebsiella quasipneumoniae
352 429454 429633 + NZ_CP041247.1 Raoultella electrica
353 4862168 4862347 - NC_016845.1 Klebsiella pneumoniae subsp. pneumoniae HS11286
354 4765730 4765909 + NC_013716.1 Citrobacter rodentium ICC168
355 1186314 1186493 + NZ_CP020388.1 Pluralibacter gergoviae
356 457892 458071 + NZ_CP014007.2 Kosakonia oryzae
357 985265 985444 + NZ_CP051548.1 Phytobacter diazotrophicus
358 20976 21155 - NZ_CP045205.1 Citrobacter telavivensis
359 1248791 1248970 - NZ_CP026047.1 Raoultella planticola
360 5146194 5146373 + NZ_CP011602.1 Phytobacter ursingii
361 438420 438599 + NZ_CP054254.1 Klebsiella variicola
362 467793 467972 + NZ_CP046672.1 Raoultella ornithinolytica
363 431020 431199 + NZ_CP050508.1 Raoultella terrigena
364 4866169 4866348 - NZ_CP015113.1 Kosakonia radicincitans
365 511571 511750 + NZ_CP060111.1 Klebsiella michiganensis
366 550716 550895 + NZ_CP036175.1 Klebsiella huaxiensis
367 2847573 2847749 - NZ_CP045350.1 Vibrio aquimaris
368 4111107 4111286 - NZ_CP022208.1 Rhodococcus pyridinivorans
369 4061495 4061677 + NZ_CP029188.1 Streptomyces tirandamycinicus
370 5996273 5996455 + NC_003155.5 Streptomyces avermitilis MA-4680 = NBRC 14893
371 1674853 1675017 + NZ_LR134352.1 Nocardia asteroides
372 789558 789734 + NC_013525.1 Thermobaculum terrenum ATCC BAA-798
373 3960459 3960641 - NZ_CP030073.1 Streptomyces cadmiisoli
374 2069714 2069896 - NZ_CP054938.1 Streptomyces harbinensis
375 4473828 4474010 + NZ_CP029043.1 Streptomyces nigra
376 2298097 2298264 - NZ_LT906453.1 Dermatophilus congolensis
377 2989644 2989823 - NZ_CP023529.1 Lelliottia amnigena
378 2021109 2021288 - NZ_AP019007.1 Enterobacter oligotrophicus
379 4195270 4195449 - NZ_AP022508.1 Enterobacter bugandensis
380 4269257 4269436 - NZ_CP027986.1 Enterobacter sichuanensis
381 4288193 4288372 - NZ_CP017184.1 Enterobacter roggenkampii
382 453694 453873 + NZ_CP013990.1 Leclercia adecarboxylata
383 4302660 4302839 - NC_015968.1 Enterobacter soli
384 3011452 3011631 + NZ_CP025034.2 Enterobacter sp. SGAir0187
385 4392204 4392383 - NZ_CP009756.1 Enterobacter cloacae
386 2850754 2850933 - NZ_CP017279.1 Enterobacter ludwigii
387 4058530 4058709 + NZ_CP045769.1 Enterobacter cancerogenus
388 4624310 4624489 - NZ_CP043318.1 Enterobacter chengduensis
389 3644509 3644691 - NZ_CP034687.1 Streptomyces griseoviridis
390 4150750 4150929 - NC_013929.1 Streptomyces scabiei 87.22
391 1412233 1412394 + NC_010337.2 Heliomicrobium modesticaldum Ice1
392 351366 351542 + NZ_CP047475.1 Vibrio astriarenae
393 2797961 2798128 - NZ_CP051884.1 Cellulomonas taurus
394 5209593 5209775 + NZ_CP071839.1 Streptomyces cyanogenus
395 619094 619273 + NC_003910.7 Colwellia psychrerythraea 34H
396 5431679 5431861 + NZ_CP071139.1 Streptomyces nojiriensis
397 642818 642976 + NZ_AP022613.1 Mycobacterium conspicuum
398 3881868 3882050 + NC_016111.1 Streptomyces cattleya NRRL 8057 = DSM 46488
399 2763437 2763619 - NZ_CP021080.1 Streptomyces pluripotens
400 245341 245520 - NZ_CP015235.1 Rhodococcus fascians D188
401 259206 259364 - NZ_LT996886.1 Tessaracoccus timonensis
402 3721753 3721935 - NZ_CP011340.1 Streptomyces pristinaespiralis
403 859603 859776 - NZ_AP023049.1 Alistipes indistinctus
404 623819 624001 + NZ_CP030862.1 Streptomyces globosus
405 4574383 4574565 + NZ_CP031742.1 Streptomyces koyangensis
406 6605004 6605186 + NZ_CP045096.1 Streptomyces phaeolivaceus
407 3656009 3656167 - NZ_CP051006.1 Streptomyces griseofuscus
408 5209091 5209273 + NZ_CP023688.1 Streptomyces rimosus
409 4289156 4289338 + NZ_CP029254.1 Streptomyces spongiicola
410 1084251 1084448 + NZ_CP018099.1 Caldithrix abyssi DSM 13497
411 484655 484840 + NZ_CP006841.1 Corynebacterium lactis RW2-5
412 3270243 3270425 - NZ_CP040752.1 Streptomyces rectiverticillatus
413 3972186 3972371 - NZ_LR134355.1 Mycolicibacterium chitae
414 340783 340938 + NZ_LN879430.1 Herbinix luporum
415 4272569 4272751 + NC_020990.1 Streptomyces albidoflavus
416 6070326 6070508 + NZ_CP034539.1 Streptomyces cyaneochromogenes
417 2931150 2931332 - NZ_CP023202.1 Streptomyces xinghaiensis S187
418 4753310 4753492 + NZ_CP042266.1 Streptomyces qinzhouensis
419 2643604 2643786 + NZ_LR214441.1 Tessaracoccus lapidicaptus
420 5091407 5091589 + NC_021985.1 Streptomyces collinus Tu 365
421 3134440 3134619 + NZ_CP034759.1 Litorilituus sediminis
422 2014149 2014346 - NZ_CP007514.1 Rubrobacter radiotolerans
423 4334477 4334653 - NC_008709.1 Psychromonas ingrahamii 37
424 899557 899739 + NZ_CP016279.1 Streptomyces griseochromogenes
425 2121214 2121399 + NZ_LT906481.1 Corynebacterium urealyticum
426 2850482 2850664 - NZ_CP033325.1 Georgenia faecalis
427 3234960 3235142 + NZ_CP038267.1 Nocardioides euryhalodurans
428 1908050 1908211 - NZ_AP014612.1 Streptococcus troglodytae
429 4017515 4017697 - NZ_CP045643.1 Streptomyces fagopyri
430 1098884 1099039 - NZ_AP022599.1 Mycolicibacterium pulveris
431 2397671 2397841 - NZ_AP022593.1 Mycolicibacterium arabiense
432 4757948 4758130 + NZ_CP063374.1 Streptomyces chromofuscus
433 583641 583808 + NZ_CP013290.1 Janibacter indicus
434 1055201 1055383 - NZ_CP022315.1 Virgibacillus phasianinus
435 4342791 4342973 + NZ_CP022310.1 Streptomyces calvus
436 4635639 4635821 - NZ_CP031455.1 Streptomyces olivoreticuli subsp. olivoreticuli
437 4207295 4207477 - NZ_CP017248.1 Streptomyces fodineus
438 3559767 3559949 - NZ_CP026652.1 Streptomyces dengpaensis
439 1710606 1710767 - NZ_CP034543.1 Streptococcus periodonticum
440 1774964 1775125 - NZ_CP012805.1 Streptococcus anginosus
441 2795200 2795373 + NZ_CP011058.1 Paenibacillus beijingensis
442 9173844 9174026 - NZ_CP063373.1 Streptomyces ferrugineus
443 2952333 2952521 + NZ_AP022562.1 Mycobacterium novum
444 3530641 3530829 - NC_015576.1 Mycolicibacter sinensis
445 3588784 3588966 - NZ_CP032698.1 Streptomyces hundungensis
446 2622831 2623010 + NZ_CP036200.1 Shewanella maritima
447 5633613 5633795 + NZ_CP047020.1 Streptomyces broussonetiae
448 4613534 4613716 + NZ_CP023407.1 Streptomyces fungicidicus
449 3958801 3958983 - NZ_CP023691.1 Streptomyces platensis
450 1757731 1757892 + NZ_CP013237.1 Streptococcus mutans
451 607894 608076 - NZ_CP019607.1 Tessaracoccus flavescens
452 2251723 2251902 + NZ_AP018449.1 Methylomusa anaerophila
453 5314357 5314539 + NZ_CP059991.1 Streptomyces gardneri
454 3475140 3475322 - NZ_CP072931.1 Streptomyces auratus AGR0001
455 3311360 3311542 - NC_016894.1 Acetobacterium woodii DSM 1030
456 5926993 5927142 - NZ_AP023355.1 Actinocatenispora thailandica
457 472154 472342 - NZ_CP042909.1 Thermosulfurimonas marina
458 4738229 4738411 - NZ_CP020472.1 Shewanella japonica
459 3512060 3512242 - NZ_LT906469.1 Mycolicibacter terrae
460 762093 762278 + NC_022116.1 Amycolatopsis mediterranei RB
461 2160321 2160491 - NC_008148.1 Rubrobacter xylanophilus DSM 9941
462 3866403 3866585 - NZ_CP019457.1 Streptomyces lydicus
463 4563394 4563576 + NZ_CP023693.1 Streptomyces cinereoruber
464 7738452 7738613 - NC_013093.1 Actinosynnema mirum DSM 43827
465 1090741 1090914 + NC_013131.1 Catenulispora acidiphila DSM 44928
466 648803 648985 + NZ_CP016353.1 Prauserella marina
467 2575324 2575506 + NZ_CP070062.1 Coprococcus comes
468 7582108 7582269 - NZ_CP023445.1 Actinosynnema pretiosum
469 2525576 2525758 - NZ_CP015449.1 Dietzia lutea
470 5385186 5385368 + NZ_CP027306.1 Streptomyces atratus
471 4068289 4068468 - NZ_CP021850.1 Pseudoclostridium thermosuccinogenes
472 1115308 1115475 + NC_015514.1 Cellulomonas fimi ATCC 484
473 4613692 4613874 + NZ_CP029196.1 Streptomyces venezuelae
474 656943 657107 - NZ_CP026746.1 Nocardia cyriacigeorgica
475 10397600 10397770 - NZ_CP034550.1 Saccharothrix syringae
476 1755743 1755895 + NZ_CP043611.1 Paenibacillus antarcticus
477 1300546 1300728 + NZ_AP018410.1 Mycobacterium pseudoshottsii JCM 15466
478 2693228 2693410 + NZ_CP058277.1 Mycobacterium marinum
479 2241715 2241897 - NZ_CP009922.3 Streptomyces xiamenensis
480 163978 164160 - NZ_CP022437.1 Virgibacillus necropolis
481 4428108 4428275 - NZ_CP011112.1 Luteipulveratus mongoliensis
482 5770418 5770594 - NZ_CP022753.1 Nocardiopsis gilva YIM 90087
483 6224054 6224230 - NZ_AP018920.1 Pseudonocardia autotrophica
484 453830 453991 + NZ_LN614830.1 Tatlockia micdadei
485 4606334 4606516 - NZ_CP070326.1 Streptomyces noursei
486 2737687 2737869 + NZ_AP022572.1 Mycobacterium shottsii
487 7752507 7752677 - NZ_CP008953.1 Amycolatopsis japonica
488 689230 689400 + NC_021252.1 Amycolatopsis keratiniphila
489 1705660 1705809 - NC_018720.1 Bifidobacterium asteroides PRL2011
490 3423884 3424066 + NZ_CP041783.1 Shewanella donghaensis
491 1696887 1697072 - NZ_CP069485.1 Corynebacterium glucuronolyticum
492 401907 402089 + NZ_CP049257.1 Nocardioides anomalus
493 1875339 1875521 - NZ_CP019606.1 Tessaracoccus aquimaris
494 5085641 5085796 - NZ_CP039126.1 Blautia producta
495 509618 509773 + NZ_CP030280.1 Blautia argi
496 6587580 6587762 - NZ_CP058322.1 Micromonospora carbonacea
497 8293453 8293635 + NZ_AP022870.1 Phytohabitans flavus
498 663645 663818 + NC_017093.1 Actinoplanes missouriensis 431
499 1004285 1004458 + NC_022657.1 Actinoplanes friuliensis DSM 7358
500 3751227 3751409 - NC_014624.2 Eubacterium callanderi
501 2158511 2158693 - NZ_CP029487.1 Eubacterium maltosivorans
502 1384770 1384952 + NZ_CP019962.1 Eubacterium limosum
503 2510859 2511014 - NZ_CP022413.2 Blautia hansenii DSM 20583
504 312512 312691 + NC_015589.1 Desulfotomaculum ruminis DSM 2154
505 1621222 1621404 + NZ_CP048000.1 Anaerocolumna sedimenticola
506 3069732 3069920 - NC_015152.1 Sphaerochaeta globosa str. Buddy
507 951976 952158 + NZ_CP045572.1 Nonomuraea nitratireducens
508 11099123 11099308 - NZ_CP012752.1 Kibdelosporangium phytohabitans
509 4381490 4381672 + NZ_AP022871.1 Phytohabitans suffuscus
510 5082837 5083016 - NZ_CP042436.1 Mucilaginibacter ginsenosidivorans
511 1610282 1610464 - NZ_CP027002.1 [Ruminococcus] gnavus ATCC 29149
512 1343434 1343613 - NC_015318.1 Hippea maritima DSM 10411
513 2126015 2126167 - NC_013740.1 Acidaminococcus fermentans DSM 20731
514 1790621 1790815 + NZ_AP019736.1 Alistipes dispar
515 2395764 2395946 - NZ_LR134406.1 Arachnia propionica
516 412266 412448 + NZ_AP023367.1 Anaerocolumna cellulosilytica
517 840660 840839 + NZ_CP030848.1 Sphingobacterium hotanense
518 428095 428277 + NZ_CP060789.1 Tessaracoccus defluvii
519 2573992 2574174 - NZ_CP015961.1 Dietzia timorensis
520 2969290 2969469 - NZ_CP048813.1 Rhodococcus triatomae
521 3239868 3240050 - NZ_CP040058.1 Anaerostipes rhamnosivorans
522 372653 372835 + NZ_CP036345.1 Anaerostipes caccae L1-92
523 3170430 3170603 - NZ_CP068013.1 Paenarthrobacter ureafaciens
524 730703 730867 + NC_008609.1 Pelobacter propionicus DSM 2379
525 5252297 5252470 + NZ_AP022620.1 Mycolicibacterium anyangense
526 4903434 4903616 - NC_013510.1 Thermomonospora curvata DSM 43183
527 1579418 1579585 - NC_009664.2 Kineococcus radiotolerans SRS30216 = ATCC BAA-149
528 770131 770289 + NZ_CP032364.1 Lachnoanaerobaculum umeaense
529 2352227 2352385 + NC_016633.1 Sphaerochaeta pleomorpha str. Grapes
530 3411220 3411387 - NZ_CP013979.1 Agromyces aureus
531 4067629 4067811 - NC_012108.1 Desulfobacterium autotrophicum HRM2
532 832534 832728 + NZ_CP031115.1 Rubrobacter indicoceani
533 3433869 3434048 + NZ_LT635479.1 Lachnoclostridium phocaeense
534 2482854 2483060 - NZ_CP033081.1 Glutamicibacter nicotianae
535 2012276 2012449 - NC_015436.1 Sphaerochaeta coccoides DSM 17374
536 5609639 5609821 - NZ_CP022464.2 Enterocloster bolteae
537 394523 394702 + NZ_CP019698.1 Desulfotomaculum ferrireducens
538 2422800 2422967 - NZ_CP028913.1 Agromyces badenianii
539 1536354 1536521 + NZ_CP035491.1 Agromyces protaetiae
540 2470481 2470648 - NZ_CP040887.1 Serinicoccus chungangensis
541 3181944 3182111 + NZ_CP014989.1 Serinicoccus hydrothermalis
542 2377006 2377191 - NZ_CP033896.1 Corynebacterium choanae
543 1122031 1122213 + NC_013595.1 Streptosporangium roseum DSM 43021
++ More..
Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NC_015564.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF00410.21 1.0 543 1600 same-strand Ribosomal protein S8
2 PF00347.25 0.99 537 1035 same-strand Ribosomal protein L6
3 PF00861.24 0.97 528 648.0 same-strand Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
4 PF00333.22 1.0 542 6.0 same-strand Ribosomal protein S5, N-terminal domain
5 PF03719.17 1.0 542 6.0 same-strand Ribosomal protein S5, C-terminal domain
6 PF00828.21 0.99 539 4 same-strand Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
7 PF00344.22 0.85 464 599.5 same-strand SecY
8 PF00253.23 0.79 427 2105 same-strand Ribosomal protein S14p/S29e
++ More..