Result : Q6F9J3
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Coenzyme PQQ synthesis protein A (Pyrroloquinoline quinone biosynthesis protein A) |
| NCBI Accession ID | CR543861.1 |
| Organism | Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) |
| Left | 2460086 |
| Right | 2460157 |
| Strand | + |
| Nucleotide Sequence | ATGTGGACCAAACCTGCTTTTGAAGATATCCGTCTTGGTTTTGAAATCACAATGTATGCTGCGGTTGAATAA |
| Sequence | MWTKPAFEDIRLGFEITMYAAVE |
| Source of smORF | Swiss-Prot |
| Function | Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis. PQQ is probably formed by cross-linking a specific glutamate to a specific tyrosine residue and excising these residues from the peptide. {ECO:0000255|HAMAP-Rule:MF_00656}. |
| Pubmed ID | 15514110 |
| Domain | CDD:391614 |
| Functional Category | Others |
| Uniprot ID | Q6F9J3 |
| ORF Length (Amino Acid) | 23 |
++ More..
| Conservation Analysis |
No. of Species: 186
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 2460086 | 2460157 | + | NC_005966.1 | Acinetobacter baylyi ADP1 |
| 2 | 4081125 | 4081196 | - | NZ_CP031146.1 | Pseudomonas plecoglossicida |
| 3 | 3825401 | 3825472 | - | NZ_CP010896.1 | Pseudomonas simiae |
| 4 | 5571818 | 5571892 | + | NZ_CP010896.1 | Pseudomonas simiae |
| 5 | 4090639 | 4090710 | - | NZ_CP014158.1 | Pseudomonas citronellolis |
| 6 | 2171865 | 2171936 | + | NC_002516.2 | Pseudomonas aeruginosa PAO1 |
| 7 | 4486961 | 4487032 | - | NZ_CP018420.1 | Pseudomonas veronii |
| 8 | 6277548 | 6277622 | + | NZ_CP018420.1 | Pseudomonas veronii |
| 9 | 3916061 | 3916132 | - | NZ_CP043042.1 | Marinobacter fonticola |
| 10 | 3293818 | 3293889 | - | NC_017506.1 | Marinobacter adhaerens HP15 |
| 11 | 848991 | 849062 | + | NZ_CP020931.1 | Marinobacter salarius |
| 12 | 73660 | 73731 | - | NZ_CP031093.1 | Hydrocarboniclastica marina |
| 13 | 3889278 | 3889349 | + | NZ_CP017715.1 | Marinobacter salinus |
| 14 | 1396224 | 1396295 | + | NZ_CP011494.1 | Marinobacter psychrophilus |
| 15 | 2217392 | 2217463 | - | NZ_CP013452.1 | Burkholderia cenocepacia |
| 16 | 2515259 | 2515333 | - | NZ_CP013452.1 | Burkholderia cenocepacia |
| 17 | 2383126 | 2383197 | - | NZ_CP051487.1 | Pseudomonas umsongensis |
| 18 | 4549041 | 4549112 | - | NZ_CP051487.1 | Pseudomonas umsongensis |
| 19 | 6306787 | 6306861 | + | NZ_CP051487.1 | Pseudomonas umsongensis |
| 20 | 267752 | 267823 | + | NZ_CP049136.1 | Paraburkholderia tropica |
| 21 | 73038 | 73109 | + | NZ_CP043869.1 | Neptunomonas concharum |
| 22 | 1728556 | 1728627 | - | NZ_CP045302.1 | Azotobacter salinestris |
| 23 | 263892 | 263963 | - | NZ_CP017565.1 | Paraburkholderia sprentiae WSM5005 |
| 24 | 3477533 | 3477604 | - | NZ_CP065435.1 | Halomonas sp. SS10-MC5 |
| 25 | 4008476 | 4008547 | + | NZ_CP065435.1 | Halomonas sp. SS10-MC5 |
| 26 | 3462389 | 3462463 | - | NZ_CP065435.1 | Halomonas sp. SS10-MC5 |
| 27 | 655438 | 655509 | - | NZ_CP013106.1 | Halomonas huangheensis |
| 28 | 3539291 | 3539362 | - | NZ_CP014870.1 | Pseudomonas silesiensis |
| 29 | 6240157 | 6240231 | + | NZ_CP014870.1 | Pseudomonas silesiensis |
| 30 | 3105716 | 3105787 | + | NZ_CP035088.1 | Pseudomonas viciae |
| 31 | 6111769 | 6111843 | + | NZ_CP035088.1 | Pseudomonas viciae |
| 32 | 3866026 | 3866097 | - | NZ_CP054205.1 | Pseudomonas rhodesiae |
| 33 | 5411601 | 5411675 | + | NZ_CP054205.1 | Pseudomonas rhodesiae |
| 34 | 3588358 | 3588429 | - | NC_021505.1 | Pseudomonas putida NBRC 14164 |
| 35 | 483140 | 483211 | - | NC_021505.1 | Pseudomonas putida NBRC 14164 |
| 36 | 1569798 | 1569872 | - | NZ_CP054626.1 | Cupriavidus gilardii |
| 37 | 1461144 | 1461215 | + | NZ_CP009365.1 | Pseudomonas soli |
| 38 | 5559305 | 5559376 | - | NZ_CP009365.1 | Pseudomonas soli |
| 39 | 2764795 | 2764866 | - | NC_010506.1 | Shewanella woodyi ATCC 51908 |
| 40 | 2577682 | 2577753 | + | NZ_CP022562.1 | Pseudomonas monteilii |
| 41 | 514273 | 514344 | - | NZ_CP022562.1 | Pseudomonas monteilii |
| 42 | 3661687 | 3661761 | + | NZ_CP037867.1 | Hydrogenophaga pseudoflava |
| 43 | 1810764 | 1810835 | - | NZ_CP048812.1 | Halomonas socia |
| 44 | 5877325 | 5877396 | + | NZ_CP056030.1 | Pseudomonas eucalypticola |
| 45 | 3539775 | 3539846 | - | NZ_CP048833.1 | Pseudomonas multiresinivorans |
| 46 | 3031456 | 3031527 | + | NZ_CP047698.1 | Pseudomonas knackmussii |
| 47 | 2892425 | 2892496 | - | NZ_CP015839.1 | Marinobacterium aestuarii |
| 48 | 421256 | 421327 | - | NC_008027.1 | Pseudomonas entomophila L48 |
| 49 | 5278672 | 5278743 | + | NZ_CP024159.1 | Pseudomonas mosselii |
| 50 | 1526078 | 1526149 | + | NZ_AP014545.1 | Amphritea japonica ATCC BAA-1530 |
| 51 | 331817 | 331888 | + | NZ_CP067059.1 | Rahnella aceris |
| 52 | 510137 | 510208 | + | NZ_CP048810.1 | Pseudomonas bijieensis |
| 53 | 4801508 | 4801582 | - | NZ_CP048810.1 | Pseudomonas bijieensis |
| 54 | 3122301 | 3122372 | - | NZ_AP014862.1 | Pseudomonas furukawaii |
| 55 | 1811412 | 1811483 | + | NZ_AP022642.1 | Pseudomonas otitidis |
| 56 | 2649696 | 2649767 | + | NZ_CP043311.1 | Pseudomonas lalkuanensis |
| 57 | 4201705 | 4201776 | - | NC_012560.1 | Azotobacter vinelandii DJ |
| 58 | 950887 | 950958 | + | NZ_CP011835.1 | Azotobacter chroococcum |
| 59 | 3064573 | 3064644 | + | NZ_CP034725.1 | Pseudomonas brassicacearum |
| 60 | 6160703 | 6160777 | + | NZ_CP034725.1 | Pseudomonas brassicacearum |
| 61 | 359912 | 359983 | + | NZ_CP014262.1 | Pseudomonas corrugata |
| 62 | 2970521 | 2970595 | + | NZ_CP014262.1 | Pseudomonas corrugata |
| 63 | 5473030 | 5473101 | + | NZ_CP007039.1 | Pseudomonas cichorii JBC1 |
| 64 | 5292897 | 5292968 | + | NZ_CP071706.1 | Pseudomonas donghuensis |
| 65 | 2065655 | 2065726 | + | NZ_CP071706.1 | Pseudomonas donghuensis |
| 66 | 596650 | 596721 | - | NZ_CP046621.1 | Pseudomonas alkylphenolica |
| 67 | 50440 | 50511 | - | NZ_CP070505.1 | Pseudomonas toyotomiensis |
| 68 | 2259253 | 2259324 | + | NZ_CP013124.1 | Pseudomonas mendocina S5.2 |
| 69 | 2454933 | 2455004 | + | NZ_CP060009.1 | Pseudomonas sediminis |
| 70 | 4055358 | 4055429 | - | NZ_CP009533.1 | Pseudomonas rhizosphaerae |
| 71 | 2530701 | 2530772 | + | NZ_LS999205.1 | Pseudomonas protegens CHA0 |
| 72 | 6260381 | 6260455 | + | NZ_LS999205.1 | Pseudomonas protegens CHA0 |
| 73 | 6724729 | 6724800 | + | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 74 | 4519717 | 4519791 | - | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 75 | 4421707 | 4421781 | + | NC_008786.1 | Verminephrobacter eiseniae EF01-2 |
| 76 | 3912401 | 3912472 | + | NZ_CP065135.1 | Halomonas venusta |
| 77 | 2829963 | 2830034 | + | NC_018691.1 | Alcanivorax dieselolei B5 |
| 78 | 3659788 | 3659859 | + | NZ_AP022843.1 | Halomonas hydrothermalis |
| 79 | 779129 | 779203 | + | NZ_CP011257.1 | Ralstonia mannitolilytica |
| 80 | 641022 | 641096 | + | NZ_CP016023.1 | Ralstonia insidiosa |
| 81 | 3222708 | 3222779 | - | NZ_CP068551.1 | Pseudomonas khazarica |
| 82 | 877244 | 877315 | - | NC_003910.7 | Colwellia psychrerythraea 34H |
| 83 | 964830 | 964901 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 84 | 3614047 | 3614118 | + | NC_013960.1 | Nitrosococcus halophilus Nc 4 |
| 85 | 5346316 | 5346390 | + | NZ_CP027723.1 | Pseudomonas orientalis |
| 86 | 706702 | 706776 | - | NZ_CP070503.1 | Pseudomonas atacamensis |
| 87 | 535763 | 535837 | - | NZ_CP062158.2 | Pseudomonas lundensis |
| 88 | 16774 | 16848 | - | NZ_CP026113.1 | Paraburkholderia terrae |
| 89 | 978638 | 978712 | - | NZ_CP026113.1 | Paraburkholderia terrae |
| 90 | 5523935 | 5524009 | + | NZ_CP042804.1 | Pseudomonas amygdali pv. tabaci str. ATCC 11528 |
| 91 | 392497 | 392571 | - | NZ_CP067022.1 | Pseudomonas cannabina pv. alisalensis |
| 92 | 2398588 | 2398662 | - | NZ_CP013403.1 | Burkholderia metallica |
| 93 | 2103988 | 2104062 | - | NZ_CP024942.1 | Paraburkholderia terricola |
| 94 | 5954610 | 5954684 | + | NZ_CP062252.1 | Pseudomonas allokribbensis |
| 95 | 5945214 | 5945288 | + | NZ_CP062253.1 | Pseudomonas gozinkensis |
| 96 | 560896 | 560970 | - | NC_004578.1 | Pseudomonas syringae pv. tomato str. DC3000 |
| 97 | 2986794 | 2986868 | - | NZ_CP014205.2 | Pseudomonas glycinae |
| 98 | 5738462 | 5738536 | + | NZ_CP029608.1 | Pseudomonas kribbensis |
| 99 | 5459869 | 5459943 | + | NZ_CP068034.2 | Pseudomonas syringae |
| 100 | 1140573 | 1140647 | - | NZ_CP049044.1 | Pseudomonas psychrophila |
| 101 | 4966895 | 4966969 | - | NZ_CP012676.1 | Pseudomonas versuta |
| 102 | 338806 | 338880 | - | NZ_CP012400.2 | Pseudomonas yamanorum |
| 103 | 5534028 | 5534102 | + | NZ_CP023272.1 | Pseudomonas lurida |
| 104 | 2006965 | 2007039 | + | NZ_CP024941.1 | Paraburkholderia terricola |
| 105 | 1222594 | 1222665 | - | NZ_CP012373.2 | Beggiatoa leptomitoformis |
| 106 | 3030290 | 3030364 | + | NC_007952.1 | Paraburkholderia xenovorans LB400 |
| 107 | 672956 | 673030 | - | NC_007952.1 | Paraburkholderia xenovorans LB400 |
| 108 | 5940196 | 5940270 | + | NZ_CP027756.1 | Pseudomonas synxantha |
| 109 | 3282207 | 3282281 | + | NZ_CP022989.1 | Paraburkholderia aromaticivorans |
| 110 | 436836 | 436910 | - | NC_021289.1 | Caballeronia insecticola |
| 111 | 1012921 | 1012995 | + | NZ_CP046904.1 | Massilia flava |
| 112 | 501363 | 501434 | + | NZ_CP012362.1 | Oblitimonas alkaliphila |
| 113 | 142253 | 142327 | - | NC_021294.1 | Caballeronia insecticola |
| 114 | 947537 | 947611 | + | NC_021294.1 | Caballeronia insecticola |
| 115 | 1360129 | 1360203 | - | NZ_CP015960.1 | Paraburkholderia caribensis |
| 116 | 98584 | 98658 | - | NZ_CP015960.1 | Paraburkholderia caribensis |
| 117 | 4051391 | 4051468 | + | NZ_CP028271.1 | Mixta intestinalis |
| 118 | 1947772 | 1947846 | - | NZ_CP017755.1 | Cupriavidus malaysiensis |
| 119 | 1631725 | 1631799 | - | NZ_CP003915.1 | Advenella mimigardefordensis DPN7 |
| 120 | 404200 | 404274 | - | NZ_CP022987.1 | Pusillimonas thiosulfatoxidans |
| 121 | 3073399 | 3073470 | - | NZ_CP013189.1 | Pseudohongiella spirulinae |
| 122 | 6218627 | 6218701 | + | NZ_CP061079.1 | Pseudomonas chlororaphis |
| 123 | 1510725 | 1510796 | + | NC_017857.3 | Methylophaga nitratireducenticrescens |
| 124 | 878749 | 878820 | + | NC_017857.3 | Methylophaga nitratireducenticrescens |
| 125 | 1738462 | 1738533 | - | NC_017857.3 | Methylophaga nitratireducenticrescens |
| 126 | 844483 | 844554 | - | NC_017857.3 | Methylophaga nitratireducenticrescens |
| 127 | 461746 | 461820 | + | NC_017857.3 | Methylophaga nitratireducenticrescens |
| 128 | 318834 | 318911 | + | NZ_CP026377.1 | Mixta gaviniae |
| 129 | 246996 | 247073 | + | NZ_CP061511.1 | Mixta calida |
| 130 | 1348464 | 1348541 | - | NZ_CP019706.1 | Pantoea alhagi |
| 131 | 2054673 | 2054744 | - | NC_017856.1 | Methylophaga frappieri |
| 132 | 1427157 | 1427228 | - | NC_017856.1 | Methylophaga frappieri |
| 133 | 2074342 | 2074413 | + | NC_017856.1 | Methylophaga frappieri |
| 134 | 1239006 | 1239077 | + | NZ_CP020465.1 | Cognaticolwellia beringensis |
| 135 | 284270 | 284341 | - | NC_015554.1 | Alteromonas naphthalenivorans |
| 136 | 4193694 | 4193765 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 137 | 1319078 | 1319152 | + | NZ_CP066076.1 | Paraburkholderia ginsengisoli |
| 138 | 772798 | 772872 | - | NC_008781.1 | Polaromonas naphthalenivorans CJ2 |
| 139 | 446653 | 446727 | + | NZ_CP009794.1 | Burkholderia dolosa AU0158 |
| 140 | 3989292 | 3989366 | + | NZ_CP036401.1 | Massilia albidiflava |
| 141 | 2973379 | 2973453 | + | NZ_CP017476.1 | Hydrogenophaga crassostreae |
| 142 | 1842594 | 1842668 | + | NC_010625.1 | Paraburkholderia phymatum STM815 |
| 143 | 1079442 | 1079516 | + | NC_010625.1 | Paraburkholderia phymatum STM815 |
| 144 | 247313 | 247384 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 145 | 490512 | 490586 | - | NZ_CP040017.1 | Massilia umbonata |
| 146 | 509440 | 509514 | - | NZ_CP009830.1 | Burkholderia multivorans ATCC BAA-247 |
| 147 | 956155 | 956232 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 148 | 3081464 | 3081541 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 149 | 959708 | 959785 | - | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 150 | 3172405 | 3172482 | + | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 151 | 2474141 | 2474218 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 152 | 1352970 | 1353041 | - | NZ_CP038033.1 | Nitrosococcus wardiae |
| 153 | 2383055 | 2383129 | + | NZ_CP024935.1 | Paraburkholderia graminis |
| 154 | 721703 | 721777 | - | NZ_CP024935.1 | Paraburkholderia graminis |
| 155 | 2518052 | 2518123 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 156 | 2545413 | 2545484 | - | NZ_CP054254.1 | Klebsiella variicola |
| 157 | 2770766 | 2770837 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 158 | 2457451 | 2457522 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 159 | 2510811 | 2510885 | - | NZ_CP013400.1 | Burkholderia seminalis |
| 160 | 1188133 | 1188207 | - | NZ_CP039288.1 | Cupriavidus necator H16 |
| 161 | 2566437 | 2566511 | - | NZ_CP022990.1 | Paraburkholderia aromaticivorans |
| 162 | 3859840 | 3859914 | + | NZ_CP011568.3 | Pandoraea thiooxydans |
| 163 | 4191366 | 4191437 | + | NZ_CP014322.1 | Alteromonas addita |
| 164 | 3442394 | 3442465 | + | NZ_CP008849.1 | Alteromonas australica |
| 165 | 1244394 | 1244468 | + | NZ_CP051461.1 | Polaromonas vacuolata |
| 166 | 3377504 | 3377578 | + | NZ_CP045236.1 | Burkholderia cepacia |
| 167 | 3351176 | 3351247 | - | NZ_CP022684.1 | Ketobacter alkanivorans |
| 168 | 3463228 | 3463299 | + | NZ_CP046670.1 | Alteromonas mediterranea |
| 169 | 262759 | 262833 | + | NC_010524.1 | Leptothrix cholodnii SP-6 |
| 170 | 29530 | 29604 | + | NZ_CP029178.1 | Acidibrevibacterium fodinaquatile |
| 171 | 328789 | 328860 | + | NZ_CP049115.1 | Pantoea stewartii |
| 172 | 2771895 | 2771969 | + | NC_017964.1 | Advenella kashmirensis WT001 |
| 173 | 1615391 | 1615462 | + | NZ_CP014056.2 | Grimontia hollisae |
| 174 | 2443649 | 2443720 | - | NC_017554.1 | Pantoea ananatis PA13 |
| 175 | 1832728 | 1832805 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 176 | 2620591 | 2620668 | - | NZ_LT906479.1 | Serratia ficaria |
| 177 | 252364 | 252435 | + | NZ_LN907827.1 | Erwinia gerundensis |
| 178 | 25801 | 25872 | - | NC_012969.1 | Methylovorus glucosetrophus SIP3-4 |
| 179 | 1638805 | 1638876 | - | NC_012969.1 | Methylovorus glucosetrophus SIP3-4 |
| 180 | 2936863 | 2936934 | + | NC_012969.1 | Methylovorus glucosetrophus SIP3-4 |
| 181 | 2913913 | 2913984 | + | NC_012969.1 | Methylovorus glucosetrophus SIP3-4 |
| 182 | 2911619 | 2911690 | + | NC_012969.1 | Methylovorus glucosetrophus SIP3-4 |
| 183 | 2576183 | 2576260 | + | NZ_CP071320.1 | Serratia ureilytica |
| 184 | 2143806 | 2143877 | - | NZ_CP038853.1 | Pantoea vagans |
| 185 | 2143357 | 2143428 | - | NZ_CP045720.1 | Pantoea eucalypti |
| 186 | 1915598 | 1915669 | + | NZ_CP034148.1 | Pantoea agglomerans |
| 187 | 3366263 | 3366334 | + | NZ_CP020388.1 | Pluralibacter gergoviae |
| 188 | 2976125 | 2976196 | + | NC_007484.1 | Nitrosococcus oceani ATCC 19707 |
| 189 | 515440 | 515511 | - | NC_014315.1 | Nitrosococcus watsonii C-113 |
| 190 | 2557007 | 2557084 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 191 | 974241 | 974318 | + | NZ_CP038662.1 | Serratia nematodiphila |
| 192 | 3967013 | 3967090 | - | NZ_CP065640.1 | Serratia rubidaea |
| 193 | 3215742 | 3215816 | - | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 194 | 3173704 | 3173778 | - | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 195 | 22396 | 22467 | - | NC_007947.1 | Methylobacillus flagellatus KT |
| 196 | 2839098 | 2839169 | + | NC_007947.1 | Methylobacillus flagellatus KT |
| 197 | 1800284 | 1800355 | - | NC_007947.1 | Methylobacillus flagellatus KT |
| 198 | 3355526 | 3355600 | + | NZ_CP019038.1 | Massilia putida |
| 199 | 1545228 | 1545302 | + | NC_022997.1 | Hyphomicrobium nitrativorans NL23 |
| 200 | 1890538 | 1890609 | + | NZ_CP015581.1 | Tatumella citrea |
| 201 | 480419 | 480490 | + | NC_012968.1 | Methylotenera mobilis JLW8 |
| 202 | 2493324 | 2493395 | + | NC_012968.1 | Methylotenera mobilis JLW8 |
| 203 | 855665 | 855736 | + | NC_012968.1 | Methylotenera mobilis JLW8 |
| 204 | 1083939 | 1084010 | + | NC_012968.1 | Methylotenera mobilis JLW8 |
| 205 | 22626 | 22697 | - | NC_012968.1 | Methylotenera mobilis JLW8 |
| 206 | 1731190 | 1731264 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 207 | 394484 | 394561 | + | NZ_CP040428.1 | Jejubacter calystegiae |
| 208 | 540127 | 540201 | + | NZ_CP053840.1 | Arcobacter venerupis |
| 209 | 582148 | 582222 | + | NZ_CP042652.1 | Pseudoarcobacter acticola |
| 210 | 2359621 | 2359692 | - | NC_014207.1 | Methylotenera versatilis 301 |
| 211 | 1325979 | 1326050 | + | NC_014207.1 | Methylotenera versatilis 301 |
| 212 | 2902634 | 2902705 | + | NC_014207.1 | Methylotenera versatilis 301 |
| 213 | 78714 | 78785 | - | NC_014207.1 | Methylotenera versatilis 301 |
| 214 | 3464874 | 3464948 | - | NZ_CP035708.1 | Sphaerotilus natans subsp. sulfidivorans |
| 215 | 382138 | 382212 | + | NZ_CP035928.1 | Malaciobacter pacificus |
| 216 | 371947 | 372021 | + | NZ_CP035928.1 | Malaciobacter pacificus |
| 217 | 2676990 | 2677064 | - | NZ_CP029210.1 | Aquabacterium olei |
| 218 | 3236224 | 3236298 | + | NC_008825.1 | Methylibium petroleiphilum PM1 |
| 219 | 1305161 | 1305235 | + | NZ_CP059467.1 | Aromatoleum bremense |
| 220 | 3131045 | 3131119 | - | NZ_CP064781.1 | Azospira restricta |
| 221 | 1362741 | 1362815 | + | NZ_CP016210.1 | Azoarcus olearius |
| 222 | 1003882 | 1003956 | + | NZ_CP014646.1 | Thauera humireducens |
| 223 | 2810509 | 2810583 | - | NC_014166.1 | Arcobacter nitrofigilis DSM 7299 |
| 224 | 3186605 | 3186685 | + | NC_016631.1 | Granulicella mallensis MP5ACTX8 |
| 225 | 1214471 | 1214551 | + | NZ_CP037899.1 | Methylacidiphilum kamchatkense Kam1 |
| 226 | 3603209 | 3603283 | - | NZ_CP015249.1 | Dokdonella koreensis DS-123 |
| 227 | 5519959 | 5520033 | + | NZ_CP018632.1 | Granulosicoccus antarcticus IMCC3135 |
| 228 | 1317645 | 1317719 | + | NZ_CP029331.1 | Thauera hydrothermalis |
| 229 | 1779758 | 1779835 | - | NZ_LR134201.1 | Cedecea lapagei |
| 230 | 4634081 | 4634155 | + | NZ_CP059560.1 | Aromatoleum petrolei |
| 231 | 2932206 | 2932280 | + | NZ_CP022423.1 | Vitreoscilla filiformis |
| 232 | 2103758 | 2103838 | + | NZ_CP058907.1 | Rhodopseudomonas palustris |
| 233 | 728162 | 728242 | + | NZ_CP030126.1 | Indioceanicola profundi |
| 234 | 2929783 | 2929854 | - | NZ_CP045295.1 | Paenibacillus cellulositrophicus |
| 235 | 101335 | 101415 | + | NZ_CP029831.1 | Azospirillum ramasamyi |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_005966.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF12706.9 | 0.93 | 173 | 72.0 | same-strand | Beta-lactamase superfamily domain |
| 2 | PF03070.18 | 0.92 | 172 | 998 | same-strand | TENA/THI-4/PQQC family |
| 3 | PF05402.14 | 0.97 | 181 | 1745 | same-strand | Coenzyme PQQ synthesis protein D (PqqD) |
| 4 | PF04055.23 | 0.91 | 170 | 2011 | same-strand | Radical SAM superfamily |
| 5 | PF13186.8 | 0.89 | 166 | 2010 | same-strand | Iron-sulfur cluster-binding domain |
++ More..