ProsmORF-pred
Result : Q6A7V2
Protein Information
Information Type Description
Protein name 50S ribosomal protein L35
NCBI Accession ID AE017283.1
Organism Cutibacterium acnes (strain DSM 16379 / KPA171202) (Propionibacterium acnes)
Left 1535047
Right 1535253
Strand -
Nucleotide Sequence ATGCCCAAGATGAAGAGCCACTCCGGGACGAAGAAGCGTTTCAAGGTGACCGGCTCGGGCAAGGTCACCGCTCGCAAGGCCGGCAAACGCCACCTCAACGAGCACAAGTCCTCGCGCGTTACTCGCCGTCTGACCGGGGAGACCGTGCTGTCCAAGGGCGAGGCTGCCAAGGTTAAGAAGCTGCTCGCTGGTCATCCTGGCCGTTGA
Sequence MPKMKSHSGTKKRFKVTGSGKVTARKAGKRHLNEHKSSRVTRRLTGETVLSKGEAAKVKKLLAGHPGR
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl00392. Profile Description: Ribosomal protein L35. This ribosomal protein is found in bacteria and organelles only. It is not closely related to any eukaryotic or archaeal ribosomal protein. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Pubmed ID 15286373
Domain CDD:412354
Functional Category Ribosomal_protein
Uniprot ID Q6A7V2
ORF Length (Amino Acid) 68
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 516
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 1535047 1535253 - NC_006085.1 Cutibacterium acnes KPA171202
2 880709 880915 + NC_021064.1 Cutibacterium avidum 44067
3 3375690 3375896 + NZ_CP019400.1 Acidipropionibacterium acidipropionici
4 2486883 2487089 - NZ_CP025198.1 Acidipropionibacterium virtanenii
5 278921 279127 - NZ_CP040635.1 Acidipropionibacterium jensenii
6 1789718 1789924 - NZ_LT906441.1 Cutibacterium granulosum
7 7644294 7644488 + NZ_CP023688.1 Streptomyces rimosus
8 2387027 2387221 - NZ_CP071139.1 Streptomyces nojiriensis
9 6422870 6423064 + NZ_CP022310.1 Streptomyces calvus
10 2306227 2306421 - NZ_CP034463.1 Streptomyces aquilus
11 5906207 5906401 + NZ_CP023692.1 Streptomyces vinaceus
12 2019476 2019670 - NZ_CP034539.1 Streptomyces cyaneochromogenes
13 1332604 1332798 - NZ_CP015866.1 Streptomyces parvulus
14 6977870 6978064 + NZ_CP030073.1 Streptomyces cadmiisoli
15 2289801 2289995 - NZ_CP020569.1 Streptomyces gilvosporeus
16 1500232 1500426 - NZ_CP023407.1 Streptomyces fungicidicus
17 5973851 5974045 + NZ_CP023701.1 Streptomyces subrutilus
18 1956944 1957138 - NC_021985.1 Streptomyces collinus Tu 365
19 1836621 1836815 - NZ_CP015098.1 Streptomyces qaidamensis
20 1300431 1300625 - NZ_CP029043.1 Streptomyces nigra
21 4840555 4840749 - NZ_CP030862.1 Streptomyces globosus
22 2309290 2309484 - NZ_CP047020.1 Streptomyces broussonetiae
23 7766568 7766762 + NZ_CP017248.1 Streptomyces fodineus
24 2578546 2578740 - NZ_CP070326.1 Streptomyces noursei
25 1115132 1115326 - NZ_CP021080.1 Streptomyces pluripotens
26 6747600 6747794 + NZ_CP051006.1 Streptomyces griseofuscus
27 2001600 2001794 - NZ_CP071839.1 Streptomyces cyanogenus
28 1778925 1779119 - NZ_CP019457.1 Streptomyces lydicus
29 1035362 1035556 - NZ_CP032229.1 Streptomyces seoulensis
30 1704552 1704746 - NZ_CP012382.1 Streptomyces ambofaciens ATCC 23877
31 8000124 8000318 - NZ_CP016279.1 Streptomyces griseochromogenes
32 7955081 7955275 + NZ_CP022744.1 Streptomyces lincolnensis
33 7947348 7947542 + NZ_CP023689.1 Streptomyces chartreusis
34 1589993 1590187 - NZ_CP045096.1 Streptomyces phaeolivaceus
35 1714524 1714718 - NZ_CP010849.1 Streptomyces cyaneogriseus subsp. noncyanogenus
36 6456977 6457171 + NZ_LN831790.1 Streptomyces leeuwenhoekii
37 7715634 7715828 + NZ_CP032427.1 Streptomyces griseorubiginosus
38 1837937 1838131 + NC_015635.1 Microlunatus phosphovorus NM-1
39 1399239 1399433 - NZ_CP072931.1 Streptomyces auratus AGR0001
40 8183139 8183333 + NC_013929.1 Streptomyces scabiei 87.22
41 2657873 2658067 - NZ_CP027433.1 Gordonia iterans
42 1312855 1313049 - NZ_CP029196.1 Streptomyces venezuelae
43 1805908 1806102 - NZ_CP023691.1 Streptomyces platensis
44 1597413 1597607 - NZ_CP023693.1 Streptomyces cinereoruber
45 3384987 3385181 - NZ_AP023172.1 Rhodococcus qingshengii
46 3001907 3002101 - NZ_LT906450.1 Rhodococcus rhodochrous
47 3313847 3314041 - NZ_CP022208.1 Rhodococcus pyridinivorans
48 2527872 2528066 - NZ_CP011853.1 Gordonia phthalatica
49 993237 993431 - NZ_CP017316.1 Streptomyces rubrolavendulae
50 1018298 1018492 - NZ_CP023696.1 Streptomyces fradiae ATCC 10745 = DSM 40063
51 6026852 6027046 + NZ_CP034279.1 Streptomyces ficellus
52 1703837 1704031 - NZ_CP010407.1 Streptomyces vietnamensis
53 1759091 1759297 - NZ_LT985188.1 Micropruina glycogenica
54 357405 357599 - NZ_CP029254.1 Streptomyces spongiicola
55 465211 465405 - NZ_CP029188.1 Streptomyces tirandamycinicus
56 2864109 2864303 - NZ_CP027793.1 Rhodococcus hoagii
57 1824664 1824858 - NZ_CP012507.1 Kocuria palustris
58 751693 751887 - NZ_CP034438.1 Flaviflexus salsibiostraticola
59 1599821 1600015 - NC_012803.1 Micrococcus luteus NCTC 2665
60 2219144 2219350 - NZ_LR134406.1 Arachnia propionica
61 3044881 3045075 - NC_013441.1 Gordonia bronchialis DSM 43247
62 1681550 1681744 + NZ_CP048813.1 Rhodococcus triatomae
63 5653021 5653215 - NC_008278.1 Frankia alni ACN14a
64 1895795 1895992 - NZ_CP035504.1 Kocuria indica
65 2691172 2691366 - NZ_CP019066.1 Tsukamurella tyrosinosolvens
66 2777394 2777588 - NZ_CP029146.1 Rhodococcus ruber
67 2513905 2514099 - NC_014158.1 Tsukamurella paurometabola DSM 20162
68 2236315 2236509 - NZ_CP039291.1 Cellulomonas shaoxiangyii
69 2971968 2972162 - NC_016906.1 Gordonia polyisoprenivorans VH2
70 1785330 1785524 - NZ_CP021978.1 Streptomyces hawaiiensis
71 1916459 1916653 + NZ_CP013254.1 Kocuria flava
72 1929313 1929507 - NZ_CP023694.1 Streptomyces coeruleorubidus
73 6905142 6905336 + NZ_CP011340.1 Streptomyces pristinaespiralis
74 434268 434462 + NZ_CP033972.1 Gordonia insulae
75 3019837 3020043 + NZ_CP019607.1 Tessaracoccus flavescens
76 3200311 3200505 + NZ_AP022560.1 Mycolicibacterium moriokaense
77 9013175 9013369 - NZ_CP034550.1 Saccharothrix syringae
78 635823 636029 + NZ_CP019606.1 Tessaracoccus aquimaris
79 1751870 1752064 - NZ_CP059991.1 Streptomyces gardneri
80 3799414 3799608 - NZ_CP027114.1 Gordonia alkanivorans
81 4253135 4253329 + NZ_CP015235.1 Rhodococcus fascians D188
82 7125104 7125298 + NZ_CP026652.1 Streptomyces dengpaensis
83 3135918 3136112 - NZ_CP045929.1 Saccharopolyspora coralli
84 6052076 6052270 - NZ_CP023865.1 Actinoplanes teichomyceticus ATCC 31121
85 1398064 1398258 - NZ_CP023703.1 Streptomyces galilaeus
86 7679105 7679299 + NZ_AP023440.1 Streptomyces glomeroaurantiacus
87 476687 476881 - NZ_CP033719.1 Propionibacterium acidifaciens
88 276317 276511 + NZ_LS483468.1 Rhodococcus coprophilus
89 1449439 1449633 - NZ_CP072827.1 Streptomyces mobaraensis NBRC 13819 = DSM 40847
90 1217141 1217335 - NZ_AP023439.1 Streptomyces tuirus
91 1002866 1003060 + NZ_LT593929.1 Propionibacterium freudenreichii
92 2809944 2810138 - NZ_CP017146.1 Marisediminicola antarctica
93 2141793 2141987 - NC_015671.1 Cellulomonas gilvus ATCC 13127
94 1800428 1800622 + NC_015514.1 Cellulomonas fimi ATCC 484
95 5937759 5937953 + NC_020990.1 Streptomyces albidoflavus
96 6288603 6288797 + NZ_CP031742.1 Streptomyces koyangensis
97 2542296 2542490 - NZ_LR134442.1 Propionibacterium australiense
98 5642374 5642568 - NC_021252.1 Amycolatopsis keratiniphila
99 4262161 4262352 - NZ_CP022753.1 Nocardiopsis gilva YIM 90087
100 2936339 2936533 + NZ_CP008953.1 Amycolatopsis japonica
101 5722138 5722332 - NZ_CP016174.1 Amycolatopsis orientalis
102 1416395 1416589 - NZ_CP023695.1 Streptomyces alboniger
103 5221717 5221911 - NZ_AP023396.1 Nocardia wallacei
104 2996345 2996539 + NZ_AP017900.1 Nocardia seriolae
105 902387 902581 - NZ_CP031194.1 Streptomyces paludis
106 1805933 1806127 + NC_014151.1 Cellulomonas flavigena DSM 20109
107 2175715 2175909 + NZ_LR134355.1 Mycolicibacterium chitae
108 6416924 6417118 - NZ_CP023445.1 Actinosynnema pretiosum
109 6500906 6501100 - NC_013093.1 Actinosynnema mirum DSM 43827
110 2189418 2189612 - NZ_CP023690.1 Streptomyces spectabilis
111 3095488 3095682 - NZ_CP032630.1 Protaetiibacter intestinalis
112 8055065 8055259 + NC_003155.5 Streptomyces avermitilis MA-4680 = NBRC 14893
113 1736382 1736576 - NZ_CP022685.1 Streptomyces formicae
114 3194614 3194808 + NZ_CP063373.1 Streptomyces ferrugineus
115 8181451 8181645 + NZ_CP023699.1 Streptomyces kanamyceticus
116 3948369 3948563 - NZ_CP059694.1 Gordonia rubripertincta
117 1177473 1177667 + NZ_CP033081.1 Glutamicibacter nicotianae
118 1082947 1083141 + NZ_LR131272.1 Arthrobacter agilis
119 1563685 1563879 - NZ_CP063374.1 Streptomyces chromofuscus
120 2077498 2077692 - NZ_CP051884.1 Cellulomonas taurus
121 1755787 1755981 + NC_014643.1 Rothia dentocariosa ATCC 17931
122 7402662 7402856 + NZ_CP045643.1 Streptomyces fagopyri
123 1021698 1021892 + NZ_CP034412.1 Glutamicibacter creatinolyticus
124 1247151 1247345 + NC_014550.1 Glutamicibacter arilaitensis Re117
125 2366871 2367065 - NC_014165.1 Thermobispora bispora DSM 43833
126 3702289 3702483 + NZ_CP042260.1 Glutamicibacter halophytocola
127 7066284 7066478 + NZ_CP034687.1 Streptomyces griseoviridis
128 1977412 1977618 + NZ_LT996886.1 Tessaracoccus timonensis
129 780133 780327 + NZ_LR134479.1 Rothia aeria
130 3770120 3770314 - NC_007777.1 Frankia casuarinae
131 7352655 7352849 - NC_019673.1 Saccharothrix espanaensis DSM 44229
132 5438297 5438491 - NZ_CP026746.1 Nocardia cyriacigeorgica
133 6653654 6653848 - NC_017093.1 Actinoplanes missouriensis 431
134 769161 769355 - NZ_AP022593.1 Mycolicibacterium arabiense
135 1746725 1746919 + NZ_CP068013.1 Paenarthrobacter ureafaciens
136 3540324 3540518 - NC_008726.1 Mycolicibacterium vanbaalenii PYR-1
137 1666788 1666982 - NZ_CP061538.1 Rothia amarae
138 2180999 2181193 + NZ_CP041695.1 Nocardia otitidiscaviarum
139 6030718 6030912 - NZ_CP041695.1 Nocardia otitidiscaviarum
140 1536296 1536490 - NZ_CP040752.1 Streptomyces rectiverticillatus
141 1189137 1189331 - NZ_CP042266.1 Streptomyces qinzhouensis
142 2350690 2350884 - NZ_CP031425.1 Microbacterium foliorum
143 1356337 1356531 + NZ_CP031422.1 Microbacterium oxydans
144 3117042 3117236 - NZ_CP015163.1 Amycolatopsis albispora
145 1765137 1765331 - NZ_CP061539.1 Rothia terrae
146 4067654 4067848 + NZ_CP060713.1 Nocardioides mesophilus
147 559653 559847 - NZ_CP007519.1 Trueperella pyogenes
148 1759969 1760163 - NZ_CP056080.1 Rothia nasimurium
149 591630 591824 + NZ_AP022608.1 Mycolicibacterium gadium
150 2505729 2505923 + NC_013510.1 Thermomonospora curvata DSM 43183
151 2088705 2088899 + NC_014666.1 Frankia inefficax
152 3219440 3219634 + NC_013947.1 Stackebrandtia nassauensis DSM 44728
153 962513 962707 - NZ_CP066065.1 Schaalia meyeri
154 1953623 1953817 - NZ_CP038256.1 Microbacterium sediminis
155 1611700 1611894 + NZ_AP022581.1 Mycobacterium lacus
156 280855 281052 + NZ_CP035810.1 Brevibacterium luteolum
157 4123777 4123971 + NZ_AP022588.1 Mycolicibacterium sediminis
158 3079414 3079608 - NZ_AP022618.1 Mycolicibacterium insubricum
159 2513550 2513744 + NZ_CP011530.1 Mycobacteroides immunogenum
160 1165396 1165590 + NZ_CP031423.1 Microbacterium lemovicicum
161 3457339 3457533 - NZ_AP022610.1 Mycolicibacterium madagascariense
162 7271022 7271216 - NZ_CP007155.1 Kutzneria albida DSM 43870
163 2092942 2093136 + NC_006361.1 Nocardia farcinica IFM 10152
164 2642356 2642550 - NZ_CP031455.1 Streptomyces olivoreticuli subsp. olivoreticuli
165 1365928 1366122 - NZ_CP020700.1 Streptomyces tsukubensis
166 3364156 3364350 - NZ_LR134356.1 Mycolicibacterium aurum
167 1905566 1905760 - NZ_AP022601.1 Mycobacterium gallinarum
168 417879 418073 + NZ_CP011005.1 Psychromicrobium lacuslunae
169 1108006 1108200 - NZ_AP022603.1 Mycolicibacterium fallax
170 1517139 1517345 - NZ_CP060789.1 Tessaracoccus defluvii
171 496278 496472 + NZ_AP022565.1 Mycolicibacterium alvei
172 6628750 6628944 - NC_022657.1 Actinoplanes friuliensis DSM 7358
173 5904994 5905188 - NC_009142.1 Saccharopolyspora erythraea NRRL 2338
174 5838390 5838584 + NZ_CP065253.1 Streptomyces clavuligerus
175 890985 891179 - NZ_CP018135.1 Neomicrococcus aestuarii
176 2016623 2016817 + NZ_LR134476.1 Trueperella bialowiezensis
177 1738549 1738743 - NZ_AP022575.1 Mycobacterium shinjukuense
178 2252844 2253038 + NZ_AP018165.1 [Mycobacterium] stephanolepidis
179 3235734 3235928 - NZ_CP071883.1 Curtobacterium flaccumfaciens pv. flaccumfaciens
180 2675909 2676103 + NZ_AP019307.1 Nocardioides baekrokdamisoli
181 3987755 3987949 + NZ_AP022598.1 Mycolicibacterium parafortuitum
182 6719537 6719731 - NC_022116.1 Amycolatopsis mediterranei RB
183 6407498 6407692 + NZ_CP023702.1 Streptomyces nitrosporeus
184 808004 808198 + NZ_CP044344.1 Nocardioides cynanchi
185 2304832 2305026 - NZ_CP010271.1 Mycobacteroides saopaulense
186 372414 372608 + NZ_AP022616.1 Mycolicibacterium phocaicum
187 979084 979278 - NZ_AP022577.1 Mycolicibacterium aubagnense
188 3431820 3432014 - NZ_CP062008.1 Mycolicibacterium mucogenicum DSM 44124
189 4098634 4098828 + NZ_AP022579.1 Mycolicibacterium boenickei
190 1819707 1819901 - NZ_AP022614.1 Mycobacterium parmense
191 34062 34256 + NZ_CP060716.1 Leucobacter denitrificans
192 6873667 6873861 + NZ_CP032698.1 Streptomyces hundungensis
193 624347 624541 + NC_010168.1 Renibacterium salmoninarum ATCC 33209
194 2384916 2385110 + NZ_CP014955.1 Mycobacteroides abscessus
195 4580755 4580949 - NZ_CP016353.1 Prauserella marina
196 2415878 2416072 + NZ_CP049253.1 Microbacterium amylolyticum
197 3624462 3624656 + NZ_AP022572.1 Mycobacterium shottsii
198 2693547 2693741 + NZ_AP018410.1 Mycobacterium pseudoshottsii JCM 15466
199 4295675 4295869 + NZ_CP058277.1 Mycobacterium marinum
200 3011433 3011627 + NZ_CP020809.1 Mycobacterium dioxanotrophicus
201 7148190 7148384 - NZ_AP022567.1 Mycolicibacterium mageritense
202 446929 447123 + NZ_AP022573.1 Mycobacterium saskatchewanense
203 735954 736148 - NZ_CP054938.1 Streptomyces harbinensis
204 507637 507831 - NZ_CP009922.3 Streptomyces xiamenensis
205 979623 979817 + NZ_CP031421.1 Microbacterium oleivorans
206 205425 205619 + NC_004572.3 Tropheryma whipplei str. Twist
207 1196023 1196217 + NZ_AP022582.1 Mycobacterium seoulense
208 478156 478350 + NZ_AP022619.1 Mycobacterium paraseoulense
209 3586022 3586216 - NZ_CP011269.1 Mycolicibacterium fortuitum
210 388657 388851 - NZ_CP049255.1 Microbacterium endophyticum
211 3616573 3616767 - NZ_CP022088.2 Nocardia brasiliensis
212 1286620 1286814 - NZ_CP041091.1 Nocardioides sambongensis
213 2048147 2048341 - NZ_CP049933.1 Leucobacter coleopterorum
214 941008 941202 + NZ_CP013745.1 Arthrobacter alpinus
215 2431404 2431598 + NZ_CP022295.1 Nocardioides aromaticivorans
216 2554941 2555135 + NZ_CP009896.1 Pimelobacter simplex
217 3136950 3137144 - NC_016946.1 Mycobacterium intracellulare ATCC 13950
218 3212902 3213096 - NC_016948.1 Mycobacterium paraintracellulare
219 1206075 1206269 + NZ_CP047186.1 Rathayibacter tanaceti
220 1166261 1166455 + NZ_CP015515.1 Rathayibacter tritici
221 16768 16962 - NZ_CP041146.1 Nocardioides humi
222 5355553 5355747 - NZ_AP022600.1 Mycolicibacterium tokaiense
223 2062646 2062840 + NZ_CP011883.2 Mycobacterium haemophilum DSM 44634
224 4002413 4002607 + NZ_CP043474.1 Mycobacterium grossiae
225 2093088 2093282 - NZ_CP044231.1 Microbacterium caowuchunii
226 707561 707755 - NZ_LT635457.1 Actinomyces pacaensis
227 699356 699550 + NZ_AP022569.1 Mycobacterium cookii
228 4824805 4824999 - NZ_AP022615.1 Mycobacterium heidelbergense
229 2323993 2324187 + NZ_CP007220.1 Mycobacteroides chelonae CCUG 47445
230 1158071 1158265 + NZ_CP035037.1 Leucobacter muris
231 1389079 1389273 + NZ_AP022586.1 Mycolicibacterium litorale
232 1742616 1742810 - NZ_AP022620.1 Mycolicibacterium anyangense
233 2882100 2882294 + NZ_CP011491.1 Mycolicibacterium vaccae 95051
234 2202190 2202387 + NZ_CP018082.1 Nocardia mangyaensis
235 2084459 2084653 + NZ_CP024633.1 Mycobacteroides salmoniphilum
236 563035 563229 - NZ_CP035806.1 Leucobacter triazinivorans
237 5478371 5478565 - NZ_CP051486.1 Streptomyces pratensis
238 7246702 7246896 - NZ_CP045572.1 Nonomuraea nitratireducens
239 1443368 1443562 + NZ_CP047180.1 Rathayibacter festucae
240 3177329 3177526 + NZ_LR134352.1 Nocardia asteroides
241 2031513 2031707 - NZ_LR134501.1 Nocardiopsis dassonvillei
242 3822834 3823028 + NC_009664.2 Kineococcus radiotolerans SRS30216 = ATCC BAA-149
243 5062493 5062687 - NZ_AP022599.1 Mycolicibacterium pulveris
244 2766354 2766548 - NC_013159.1 Saccharomonospora viridis DSM 43017
245 2178386 2178580 - NZ_AP022605.1 Mycobacterium doricum
246 1650549 1650743 + NZ_AP022617.1 Mycolicibacterium monacense
247 1815594 1815785 + NZ_CP009312.1 Lawsonella clevelandensis
248 1852928 1853122 + NC_000962.3 Mycobacterium tuberculosis H37Rv
249 1879657 1879851 + NC_015848.1 Mycobacterium canettii CIPT 140010059
250 1048391 1048585 - NZ_CP024957.1 Streptomyces cavourensis
251 537898 538104 - NZ_LR214441.1 Tessaracoccus lapidicaptus
252 5869539 5869733 + NZ_CP061007.1 Saccharopolyspora spinosa
253 388519 388713 + NZ_CP028130.1 Rathayibacter iranicus
254 1246454 1246648 - NZ_CP060404.1 Streptomyces buecherae
255 1335818 1336012 - NZ_CP013738.1 Streptomyces globisporus C-1027
256 2640172 2640366 - NZ_CP059164.1 Nocardioides ungokensis
257 8892357 8892551 + NZ_CP031142.1 Saccharopolyspora pogona
258 1133669 1133863 - NZ_CP070242.1 Streptomyces californicus
259 3672396 3672590 + NZ_AP022595.1 Mycolicibacterium sarraceniae
260 6910442 6910636 + NC_010572.1 Streptomyces griseus subsp. griseus NBRC 13350
261 3939157 3939351 - NZ_LN831039.1 Mycolicibacterium smegmatis
262 3233324 3233518 - NZ_AP022561.1 Mycolicibacterium aichiense
263 2924508 2924702 + NZ_LN849456.1 Devriesea agamarum
264 1845152 1845346 - NZ_CP031356.1 Brachybacterium saurashtrense
265 1107647 1107841 - NZ_CP020563.1 Kitasatospora albolonga
266 3193074 3193268 + NZ_CP015079.1 Nocardioides dokdonensis FR1436
267 2048489 2048683 - NZ_CP039292.1 Actinomyces procaprae
268 1272084 1272278 - NC_021177.1 Streptomyces fulvissimus DSM 40593
269 2192478 2192672 + NZ_CP014228.1 Actinomyces radicidentis
270 1174928 1175122 + NZ_LS483423.1 Jonesia denitrificans
271 2930758 2930952 - NZ_CP023147.1 Mycobacterium marseillense
272 3027427 3027621 + NZ_CP025546.1 Mycobacterium paragordonae
273 4953240 4953434 + NZ_CP016793.1 Lentzea guizhouensis
274 6197244 6197438 + NZ_CP023202.1 Streptomyces xinghaiensis S187
275 2267928 2268122 - NZ_CP033325.1 Georgenia faecalis
276 1633058 1633252 + NZ_CP029543.1 Mycobacterium leprae
277 2460700 2460894 + NZ_AP018164.1 Mycobacterium shigaense
278 2532794 2532988 + NZ_AP022613.1 Mycobacterium conspicuum
279 2909793 2909987 + NZ_CP032624.1 Gryllotalpicola protaetiae
280 3530107 3530301 + NZ_CP038436.1 Nocardioides seonyuensis
281 1122005 1122199 - NZ_CP020570.1 Streptomyces violaceoruber
282 4488828 4489022 + NZ_CP012150.1 Mycobacterium goodii
283 1294957 1295151 + NZ_CP044232.1 Microbacterium lushaniae
284 1338616 1338810 + NZ_CP038266.1 Microbacterium wangchenii
285 4100746 4100940 + NZ_AP022583.1 Mycobacterium noviomagense
286 1592040 1592234 - NZ_AP022563.1 Mycolicibacterium duvalii
287 723190 723384 + NZ_LR134357.1 Actinomyces israelii
288 1560167 1560361 + NC_015564.1 Hoyosella subflava DQS3-9A1
289 1160670 1160864 + NZ_CP045309.1 Micromonospora terminaliae
290 6888195 6888389 + NZ_AP022871.1 Phytohabitans suffuscus
291 1922471 1922665 + NZ_CP029642.1 Arthrobacter dokdonellae
292 6322672 6322866 - NC_013131.1 Catenulispora acidiphila DSM 44928
293 4234306 4234500 - NZ_AP022606.1 Mycobacterium branderi
294 6197673 6197867 + NC_022663.1 Mycobacterium kansasii ATCC 12478
295 157217 157414 + NZ_CP038452.1 Thermus caldilimi
296 1038375 1038569 - NZ_AP022587.1 Mycobacterium stomatepiae
297 1687572 1687766 - NC_016109.1 Kitasatospora setae KM-6054
298 585071 585265 - NZ_CP008802.1 Actinotignum schaalii
299 2511541 2511735 + NC_014391.1 Micromonospora aurantiaca ATCC 27029
300 741339 741533 + NZ_AP022870.1 Phytohabitans flavus
301 1036639 1036833 + NZ_CP066802.1 Actinomyces weissii
302 2366052 2366246 + NZ_CP041694.1 Cellulosimicrobium cellulans
303 1899959 1900153 - NZ_CP027306.1 Streptomyces atratus
304 3386000 3386194 - NC_016582.1 Streptomyces bingchenggensis BCW-1
305 51152 51346 - NZ_AP022562.1 Mycobacterium novum
306 1975860 1976054 + NC_015576.1 Mycolicibacter sinensis
307 756251 756445 - NZ_CP049863.1 Leucobacter viscericola
308 5877771 5877965 - NZ_AP022596.1 Mycolicibacterium helvum
309 1770532 1770726 + NZ_CP023563.1 Brachybacterium vulturis
310 2227618 2227812 + NZ_LT906483.1 Mycolicibacterium thermoresistibile
311 1337111 1337305 + NZ_CP016282.1 Cryobacterium arcticum
312 1039333 1039527 - NZ_CP030033.1 Cryobacterium soli
313 1279362 1279556 + NZ_CP023564.1 Brachybacterium ginsengisoli
314 2241747 2241941 + NZ_CP022752.1 Actinopolyspora erythraea
315 740093 740287 - NZ_CP022316.1 Brachybacterium avium
316 2082061 2082255 + NZ_AP022612.1 Mycolicibacterium confluentis
317 2760354 2760548 - NZ_AP024310.1 Mycobacterium heckeshornense
318 2889651 2889845 - NZ_CP009360.4 Mycobacterium avium subsp. hominissuis
319 918667 918861 + NZ_AP022590.1 Mycobacterium mantenii
320 36646 36840 - NZ_CP061344.1 Microbacterium hominis
321 6541173 6541367 + NZ_CP031264.1 Streptacidiphilus bronchialis
322 2076796 2076990 - NC_014246.1 Mobiluncus curtisii ATCC 43063
323 3894667 3894861 - NZ_AP022574.1 Mycolicibacterium psychrotolerans
324 2374974 2375168 - NZ_CP018762.1 Microbacterium aurum
325 1804958 1805152 + NZ_LR026975.1 Mycolicibacterium hassiacum DSM 44199
326 4944924 4945118 - NZ_CP058322.1 Micromonospora carbonacea
327 964272 964466 - NZ_AP022576.1 Mycobacterium florentinum
328 1858552 1858746 - NZ_CP043661.1 Kribbella qitaiheensis
329 858361 858555 + NZ_CP028129.1 Rathayibacter rathayi
330 1580475 1580675 - NZ_CP058670.1 Chryseoglobus indicus
331 3335044 3335238 + NZ_AP022570.1 Mycolicibacterium poriferae
332 4579110 4579304 - NC_013235.1 Nakamurella multipartita DSM 44233
333 597797 597991 - NZ_CP038267.1 Nocardioides euryhalodurans
334 1075606 1075800 + NZ_CP064760.1 Microbacterium schleiferi
335 8673065 8673259 + NZ_CP065050.1 Streptomyces solisilvae
336 2823932 2824126 + NZ_CP035494.1 Microbacterium protaetiae
337 1799265 1799462 + NZ_CP016312.1 Thermus brockianus
338 2465943 2466137 - NC_013172.1 Brachybacterium faecium DSM 4810
339 1186447 1186641 - NZ_CP026923.1 Pontimonas salivibrio
340 347939 348133 - NZ_CP066049.1 Actinomyces naeslundii
341 1161594 1161788 - NZ_LR134477.1 Actinomyces viscosus
342 907228 907422 + NZ_CP066060.1 Actinomyces oris
343 1236907 1237104 + NC_014212.1 Meiothermus silvanus DSM 9946
344 514909 515106 + NC_006461.1 Thermus thermophilus HB8
345 1486631 1486825 - NZ_CP053642.1 Actinomyces marmotae
346 3039253 3039447 - NZ_CP035491.1 Agromyces protaetiae
347 865286 865480 + NZ_CP020468.1 Actinomyces gaoshouyii
348 1411312 1411512 + NZ_CP009428.1 Paenibacillus odorifer
349 2022222 2022416 - NZ_CP045737.1 Aeromicrobium yanjiei
350 2087799 2087993 - NZ_CP026952.1 Aeromicrobium chenweiae
351 6008794 6008988 + NZ_CP023698.1 Streptomyces viridifaciens
352 1462417 1462614 - NZ_CP014141.1 Thermus parvatiensis
353 427783 427977 - NZ_CP061725.1 Micromonospora craniellae
354 2611168 2611362 - NZ_LR134363.1 Actinomyces slackii
355 1900033 1900227 + NZ_LT906469.1 Mycolicibacter terrae
356 297056 297256 + NZ_AP013035.1 Thermosulfidibacter takaii ABI70S6
357 1737955 1738149 - NZ_CP025227.1 Actinomyces wuliandei
358 823136 823330 - NZ_LR134350.1 Actinomyces howellii
359 3547497 3547697 + NZ_CP048429.1 Paenibacillus jilunlii
360 1643072 1643272 + NZ_CP009287.1 Paenibacillus graminis
361 1786973 1787173 + NZ_LN831776.1 Paenibacillus riograndensis SBR5
362 1744641 1744835 + NC_014830.1 Intrasporangium calvum DSM 43043
363 2041472 2041669 - NC_014761.1 Oceanithermus profundus DSM 14977
364 1349510 1349704 + NZ_LT906453.1 Dermatophilus congolensis
365 5564792 5564992 + NZ_CP054614.1 Paenibacillus barcinonensis
366 779590 779784 - NZ_AP017457.1 Aurantimicrobium minutum
367 1226513 1226707 + NZ_CP028913.1 Agromyces badenianii
368 1807731 1807925 - NC_014168.1 Segniliparus rotundus DSM 44985
369 1207836 1208030 - NZ_CP010822.1 Thermus aquaticus Y51MC23
370 1087963 1088157 + NZ_CP026949.1 Mycetocola zhujimingii
371 1713827 1714030 - NZ_CP039546.1 Methylorubrum populi
372 3088522 3088722 - NZ_CP033433.1 Cohnella candidum
373 2370533 2370727 - NZ_CP036250.1 Egicoccus halophilus
374 1459323 1459517 + NZ_CP020715.1 Cnuibacter physcomitrellae
375 1726329 1726529 + NZ_CP009285.1 Paenibacillus borealis
376 412036 412236 + NZ_CP021780.1 Paenibacillus donghaensis
377 2050548 2050742 - NC_022438.1 Leifsonia xyli subsp. cynodontis DSM 46306
378 5667671 5667871 - NC_011894.1 Methylobacterium nodulans ORS 2060
379 479565 479759 + NZ_CP040508.1 Rhodoluna limnophila
380 2150331 2150525 + NC_009380.1 Salinispora tropica CNB-440
381 4968922 4969122 + NZ_CP045295.1 Paenibacillus cellulositrophicus
382 6124916 6125119 - NZ_CP029553.1 Methylobacterium terrae
383 2797842 2798036 - NZ_CP013979.1 Agromyces aureus
384 2238640 2238837 - NZ_CP016757.1 Cloacibacillus porcorum
385 5891990 5892184 - NC_013729.1 Kribbella flavida DSM 17836
386 2758764 2758967 + NZ_CP015367.1 Methylobacterium phyllosphaerae
387 3569258 3569461 + NZ_CP003811.1 Methylobacterium oryzae CBMB20
388 3141463 3141666 - NZ_CP043538.1 Methylobacterium mesophilicum SR1.6/6
389 3967717 3967920 + NZ_CP029550.1 Methylobacterium durans
390 3334530 3334733 + NC_010505.1 Methylobacterium radiotolerans JCM 2831
391 9084605 9084799 - NZ_CP012752.1 Kibdelosporangium phytohabitans
392 2368537 2368731 + NZ_CP068161.1 Corynebacterium propinquum
393 1724751 1724945 + NZ_CP045529.1 Luteimicrobium xylanilyticum
394 125980 126180 + NZ_CP019044.1 Salaquimonas pukyongi
395 2594866 2595063 - NZ_CP045875.1 Heliorestis convoluta
396 3512432 3512632 + NZ_CP068595.1 Paenibacillus sonchi
397 838775 838981 + NZ_AP019829.2 Leptotrichia wadei
398 4543520 4543720 + NZ_CP016809.1 Paenibacillus ihbetae
399 1461076 1461270 - NZ_CP009249.1 Corynebacterium phocae
400 3697083 3697283 + NZ_CP016616.1 Microvirga ossetica
401 1248277 1248483 + NZ_AP019845.1 Leptotrichia trevisanii
402 377346 377546 + NZ_CP032509.1 Georhizobium profundi
403 1050073 1050273 + NC_019897.1 Thermobacillus composti KWC4
404 4107932 4108126 - NC_015312.1 Pseudonocardia dioxanivorans CB1190
405 2064728 2064925 + NC_013943.1 Denitrovibrio acetiphilus DSM 12809
406 2507423 2507623 + NZ_CP022604.1 [Ochrobactrum] quorumnocens
407 3788269 3788469 - NZ_CP017940.1 Phyllobacterium zundukense
408 3854161 3854361 - NC_013739.1 Conexibacter woesei DSM 14684
409 974627 974833 + NZ_AP019846.1 Leptotrichia hongkongensis
410 1114266 1114460 - NZ_CP070228.1 Arcanobacterium phocisimile
411 1117973 1118167 + NZ_LS483427.1 Arcanobacterium haemolyticum
412 4482497 4482697 - NZ_CP034248.1 Paenibacillus lentus
413 900066 900269 + NC_014664.1 Rhodomicrobium vannielii ATCC 17100
414 1386688 1386894 - NC_013192.1 Leptotrichia buccalis C-1013-b
415 1308287 1308484 + NC_014221.1 Truepera radiovictrix DSM 17093
416 1309472 1309678 - NZ_AP019827.1 Leptotrichia shahii
417 536235 536429 + NZ_CP044548.2 Janibacter melonis
418 1082806 1083000 + NZ_CP026948.1 Corynebacterium liangguodongii
419 1928690 1928887 - NZ_CP011388.1 Paenibacillus swuensis
420 2244081 2244275 - NZ_CP033724.1 Clavibacter michiganensis subsp. michiganensis
421 1799580 1799777 + NZ_CP045851.1 Actinomarinicola tropica
422 1183286 1183480 + NZ_CP039247.1 Corynebacterium endometrii
423 1460460 1460660 + NZ_CP004078.1 Paenibacillus sabinae T27
424 3719023 3719223 - NZ_CP013652.1 Paenibacillus naphthalenovorans
425 1543443 1543643 + NZ_CP009286.1 Paenibacillus stellifer
426 1249730 1249924 - NZ_LT906473.1 Corynebacterium cystitidis
427 1001648 1001842 + NZ_CP011312.1 Corynebacterium kutscheri
428 3314434 3314634 + NC_016641.1 Paenibacillus terrae HPL-003
429 2043081 2043281 + NC_004310.3 Brucella suis 1330
430 2046725 2046925 + NC_009505.1 Brucella ovis ATCC 25840
431 2052067 2052267 + NC_013119.1 Brucella microti CCM 4915
432 2067911 2068111 - NC_003317.1 Brucella melitensis bv. 1 str. 16M
433 2068484 2068684 - NC_022905.1 Brucella ceti TE10759-12
434 2056627 2056827 + NC_007618.1 Brucella abortus 2308
435 650963 651163 - NZ_LT605585.1 Brucella inopinata
436 1216008 1216211 - NZ_CP010522.1 Liberibacter crescens
437 1510401 1510601 + NZ_CP024422.1 Paracoccus yeei
438 1991987 1992187 + NZ_CP030239.1 Paracoccus mutanolyticus
439 1654369 1654569 + NZ_CP020612.1 Paracoccus contaminans
440 1517243 1517440 - NC_014209.1 Thermoanaerobacter mathranii subsp. mathranii str. A3
441 1535537 1535734 - NC_013921.1 Thermoanaerobacter italicus Ab9
442 2643233 2643430 - NC_016609.1 Niastella koreensis GR20-10
443 1534682 1534876 - NZ_CP009251.1 Corynebacterium stationis
444 96147 96344 + NC_015387.1 Marinithermus hydrothermalis DSM 14884
445 763520 763717 + NC_016148.1 Thermovirga lienii DSM 17291
446 3243927 3244130 + NZ_CP042430.1 Baekduia soli
447 257306 257506 + NZ_CP030126.1 Indioceanicola profundi
448 3562308 3562508 - NZ_CP012661.1 Defluviimonas alba
449 1417589 1417789 + NZ_CP004372.1 Roseibacterium elongatum DSM 19469
450 1525880 1526077 - NC_013939.1 Deferribacter desulfuricans SSM1
451 737208 737402 - NZ_CP068168.1 Corynebacterium amycolatum
452 1338179 1338373 + NZ_CP033896.1 Corynebacterium choanae
453 141417 141611 + NZ_CP014635.1 Corynebacterium simulans
454 2146199 2146399 + NZ_CP013023.1 Paenibacillus bovis
455 2302330 2302527 - NZ_CP035108.1 Geovibrio thiophilus
456 985715 985909 + NC_012704.1 Corynebacterium kroppenstedtii DSM 44385
457 1512328 1512522 - NC_012590.1 Corynebacterium aurimucosum ATCC 700975
458 1066296 1066490 + NZ_CP033897.1 Corynebacterium gerontici
459 2462106 2462306 + NZ_CP029353.1 Azospirillum thermophilum
460 2328034 2328231 - NZ_CP011454.1 Gemmatimonas phototrophica
461 810951 811148 + NC_014964.1 Thermoanaerobacter brockii subsp. finnii Ako-1
462 1654253 1654450 - NC_015958.1 Thermoanaerobacter wiegelii Rt8.B1
463 1602104 1602298 - NZ_CP006841.1 Corynebacterium lactis RW2-5
464 2196274 2196471 - NC_012489.1 Gemmatimonas aurantiaca T-27
465 570748 570954 + NC_013515.1 Streptobacillus moniliformis DSM 12112
466 653895 654095 - NZ_LT960614.1 Hartmannibacter diazotrophicus
467 428078 428272 + NZ_CP032788.1 Corynebacterium xerosis
468 1180812 1181006 + NC_021663.1 Corynebacterium terpenotabidum Y-11
469 858941 859135 + NC_022198.1 Corynebacterium argentoratense DSM 44202
470 1012188 1012382 + NC_017301.2 Corynebacterium pseudotuberculosis C231
471 118193 118387 + NZ_LT906443.1 Corynebacterium ulcerans
472 1345421 1345615 + NZ_CP009245.1 Corynebacterium aquilae DSM 44791
473 1239876 1240070 + NZ_CP009246.1 Corynebacterium flavescens
474 2622342 2622542 - NZ_CP041159.1 Leisingera aquaemixtae
475 1916614 1916808 + NZ_LS483464.1 Corynebacterium renale
476 327127 327330 + NZ_LR134529.1 Bartonella vinsonii
477 1223555 1223755 - NZ_CP031500.1 Deinococcus radiodurans
478 1323217 1323411 - NZ_CP033898.1 Corynebacterium pseudopelargi
479 1322824 1323018 - NZ_CP035299.1 Corynebacterium pelargi
480 1493771 1493965 - NZ_CP067012.1 Corynebacterium kefirresidentii
481 726666 726857 + NC_015389.1 Coriobacterium glomerans PW2
482 1370284 1370478 + NC_020506.1 Corynebacterium callunae DSM 20147
483 98944 99147 + NC_014932.1 Bartonella clarridgeiae 73
484 1045873 1046076 + NZ_CP058235.1 Bartonella alsatica
485 106999 107202 + NZ_HG965802.1 Bartonella henselae
486 97888 98091 + NZ_AP019773.1 Bartonella quintana
487 691567 691767 + NZ_CP021081.1 Deinococcus ficus
488 2130576 2130779 - NZ_CP031844.2 Bartonella krasnovii
489 3282297 3282500 - NZ_CP059896.1 Ciceribacter thiooxidans
490 641677 641871 - NZ_LT906481.1 Corynebacterium urealyticum
491 663561 663761 - NZ_CP012401.1 Azospirillum thiophilum
492 1366525 1366719 + NC_021915.1 Corynebacterium maris DSM 45190
493 3806337 3806537 - NC_003911.12 Ruegeria pomeroyi DSS-3
494 1031375 1031575 - NZ_CP015093.1 Salipiger abyssi
495 1057089 1057283 + NZ_CP011546.1 Corynebacterium uterequi
496 1380334 1380528 + NZ_CP009220.1 Corynebacterium deserti GIMN1.010
497 1403163 1403357 + NZ_CP015622.1 Corynebacterium crudilactis
498 32173 32373 + NZ_CP029829.1 Azospirillum ramasamyi
499 2801035 2801235 - NZ_CP054619.1 Azospirillum oryzae
500 728368 728571 - NZ_CP049250.1 Rhizobium rhizoryzae
501 214038 214241 + NZ_LR723670.1 Pseudorhizobium flavum
502 4178453 4178656 + NZ_FO082820.1 Pseudorhizobium banfieldiae
503 128058 128261 - NC_010161.1 Bartonella tribocorum CIP 105476
504 1191991 1192185 + NZ_CP011541.1 Corynebacterium epidermidicanis
505 1583721 1583915 + NZ_AP017369.1 Corynebacterium suranareeae
506 342487 342690 + NC_020059.1 Rhizobium tropici CIAT 899
507 2393790 2393993 - NZ_CP054021.1 Rhizobium indicum
508 1578314 1578508 + NC_004369.1 Corynebacterium efficiens YS-314
509 4913715 4913918 - NZ_CP009429.1 Sphingopyxis macrogoltabida
510 2604586 2604789 + NZ_CP071057.1 Marinicauda algicola
511 1643463 1643651 - NC_003869.1 Caldanaerobacter subterraneus subsp. tengcongensis MB4
512 4111849 4112052 + NZ_CP029451.1 Sinorhizobium fredii CCBAU 25509
513 2771441 2771641 + NC_014364.1 Sediminispirochaeta smaragdinae DSM 11293
514 3083998 3084201 - NC_008048.1 Sphingopyxis alaskensis RB2256
515 1348603 1348797 - NZ_CP017812.1 Boudabousia tangfeifanii
516 872657 872842 - NZ_CP011232.1 Kosmotoga pacifica
517 570043 570246 + NZ_CP010401.1 Bartonella ancashensis
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NC_006085.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF00588.21 0.78 402 533.5 same-strand SpoU rRNA Methylase family
2 PF08032.14 0.68 349 529 same-strand RNA 2'-O ribose methyltransferase substrate binding
3 PF00453.20 1.0 516 59.0 same-strand Ribosomal protein L20
4 PF00707.24 0.93 480 73.5 same-strand Translation initiation factor IF-3, C-terminal domain
++ More..