Result : Q67PG5
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 50S ribosomal protein L32 |
| NCBI Accession ID | AP006840.1 |
| Organism | Symbiobacterium thermophilum (strain T / IAM 14863) |
| Left | 1586935 |
| Right | 1587129 |
| Strand | + |
| Nucleotide Sequence | ATGGCGGTTCCGAAGAGAAAGGTGTCCAAGTCCCGTAGGGACTCCCGGCGGGCCCAGACCTTCCGCCTTGAGGCGCCGAACCTGAGCCCGTGCCCGAATTGCCGGACGCCCAGGCTTCCGCACCGGGTCTGCCCCAACTGTGGCTACTACCAGGGCCGGGTCGTGATCCAGCACGAGGCCGAAGCTGCCGAGTAG |
| Sequence | MAVPKRKVSKSRRDSRRAQTFRLEAPNLSPCPNCRTPRLPHRVCPNCGYYQGRVVIQHEAEAAE |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl09115. Profile Description: Ribosomal L32p protein family. This protein describes bacterial ribosomal protein L32. The noise cutoff is set low enough to include the equivalent protein from mitochondria and chloroplasts. No related proteins from the Archaea nor from the eukaryotic cytosol are detected by this model. This model is a fragment model; the putative L32 of some species shows similarity only toward the N-terminus. [Protein synthesis, Ribosomal proteins: synthesis and modification] |
| Pubmed ID | 15383646 |
| Domain | CDD:415589 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | Q67PG5 |
| ORF Length (Amino Acid) | 64 |
++ More..
| Conservation Analysis |
No. of Species: 413
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1586935 | 1587129 | + | NC_006177.1 | Symbiobacterium thermophilum IAM 14863 |
| 2 | 1333899 | 1334081 | - | NC_014209.1 | Thermoanaerobacter mathranii subsp. mathranii str. A3 |
| 3 | 1312099 | 1312281 | - | NC_013921.1 | Thermoanaerobacter italicus Ab9 |
| 4 | 1127728 | 1127907 | - | NZ_CP068564.1 | Keratinibaculum paraultunense |
| 5 | 1414305 | 1414487 | - | NC_008593.1 | Clostridium novyi NT |
| 6 | 1269641 | 1269823 | + | NZ_CP025286.1 | Ethanoligenens harbinense YUAN-3 |
| 7 | 2873184 | 2873366 | + | NC_011979.1 | Geobacter daltonii FRC-32 |
| 8 | 2393360 | 2393542 | - | NC_014833.1 | Ruminococcus albus 7 = DSM 20455 |
| 9 | 1804594 | 1804776 | + | NZ_CP048649.1 | Aminipila butyrica |
| 10 | 964064 | 964240 | + | NZ_CP036523.1 | Peptacetobacter hiranonis |
| 11 | 32541 | 32723 | + | NZ_HF545617.1 | Ruminococcus bicirculans |
| 12 | 1900192 | 1900371 | - | NC_015437.1 | Selenomonas sputigena ATCC 35185 |
| 13 | 1044416 | 1044598 | + | NZ_LT906477.1 | Clostridium cochlearium |
| 14 | 1681429 | 1681605 | + | NC_007498.2 | Syntrophotalea carbinolica DSM 2380 |
| 15 | 523933 | 524115 | + | NZ_CP027228.1 | Mogibacterium diversum |
| 16 | 318117 | 318296 | - | NZ_CP017269.1 | Geosporobacter ferrireducens |
| 17 | 896379 | 896558 | + | NZ_CP030777.1 | Faecalibacterium prausnitzii |
| 18 | 1206868 | 1207050 | - | NZ_LT632322.1 | Murdochiella vaginalis |
| 19 | 4250446 | 4250622 | - | NZ_AP018449.1 | Methylomusa anaerophila |
| 20 | 78824 | 79015 | + | NC_015682.1 | Thermodesulfobacterium geofontis OPF15 |
| 21 | 2406616 | 2406798 | - | NZ_CP040098.1 | Desulfoglaeba alkanexedens ALDC |
| 22 | 1153792 | 1153971 | + | NC_014831.1 | Thermaerobacter marianensis DSM 12885 |
| 23 | 1704635 | 1704817 | + | NC_008554.1 | Syntrophobacter fumaroxidans MPOB |
| 24 | 2175466 | 2175648 | + | NC_009483.1 | Geobacter uraniireducens Rf4 |
| 25 | 1257525 | 1257704 | + | NZ_AP019004.1 | Phascolarctobacterium faecium |
| 26 | 1323746 | 1323928 | - | NC_014964.1 | Thermoanaerobacter brockii subsp. finnii Ako-1 |
| 27 | 2915979 | 2916164 | - | NZ_CP015756.1 | Clostridium estertheticum subsp. estertheticum |
| 28 | 1901972 | 1902148 | + | NZ_CP036259.1 | Sporomusa termitida |
| 29 | 1894745 | 1894927 | + | NC_015687.1 | Clostridium acetobutylicum DSM 1731 |
| 30 | 137691 | 137873 | + | NZ_CP008796.1 | Thermodesulfobacterium commune DSM 2178 |
| 31 | 1372908 | 1373087 | - | NZ_LT906446.1 | Megamonas hypermegale |
| 32 | 1275152 | 1275334 | + | NZ_AP023213.1 | Citrifermentans bremense |
| 33 | 1435564 | 1435746 | - | NC_015958.1 | Thermoanaerobacter wiegelii Rt8.B1 |
| 34 | 1457822 | 1458007 | + | NZ_CP007514.1 | Rubrobacter radiotolerans |
| 35 | 2777768 | 2777947 | - | NC_009633.1 | Alkaliphilus metalliredigens QYMF |
| 36 | 3597790 | 3597972 | - | NC_011146.1 | Citrifermentans bemidjiense Bem |
| 37 | 1833992 | 1834174 | + | NZ_CP040924.1 | Clostridium thermarum |
| 38 | 2065775 | 2065960 | - | NC_010814.1 | Geobacter lovleyi SZ |
| 39 | 3615195 | 3615380 | + | NZ_CP012395.1 | Clostridium autoethanogenum DSM 10061 |
| 40 | 1379139 | 1379324 | + | NC_014328.1 | Clostridium ljungdahlii DSM 13528 |
| 41 | 768359 | 768547 | + | NZ_LR134523.1 | Peptoniphilus ivorii |
| 42 | 7257131 | 7257313 | - | NZ_CP061800.1 | Desulfonema magnum |
| 43 | 1367078 | 1367257 | + | NZ_CP067016.1 | Anaerococcus obesiensis |
| 44 | 752159 | 752338 | + | NZ_CP066014.1 | Anaerococcus vaginalis |
| 45 | 2780422 | 2780598 | - | NZ_CP019870.1 | Clostridioides difficile |
| 46 | 1751670 | 1751852 | + | NC_002939.5 | Geobacter sulfurreducens PCA |
| 47 | 3105720 | 3105902 | - | NZ_CP014176.1 | Clostridium argentinense |
| 48 | 1043854 | 1044036 | - | NZ_LR134524.1 | Peptoniphilus harei |
| 49 | 1548425 | 1548607 | - | NC_013740.1 | Acidaminococcus fermentans DSM 20731 |
| 50 | 739028 | 739213 | + | NC_017161.1 | Hydrogenobacter thermophilus TK-6 |
| 51 | 1170976 | 1171155 | + | NZ_CP035130.1 | Gudongella oleilytica |
| 52 | 1786985 | 1787185 | - | NC_015520.1 | Mahella australiensis 50-1 BON |
| 53 | 1497414 | 1497596 | - | NZ_LR590481.1 | Hathewaya histolytica |
| 54 | 1182796 | 1182978 | + | NZ_CP032416.1 | Clostridium fermenticellae |
| 55 | 1449538 | 1449714 | - | NC_003869.1 | Caldanaerobacter subterraneus subsp. tengcongensis MB4 |
| 56 | 813582 | 813761 | + | NC_020134.1 | Thermoclostridium stercorarium subsp. stercorarium DSM 8532 |
| 57 | 875114 | 875293 | - | NC_014926.1 | Thermovibrio ammonificans HB-1 |
| 58 | 1364049 | 1364225 | - | NZ_LR778174.1 | Veillonella parvula |
| 59 | 1140408 | 1140590 | - | NZ_CP014872.1 | Fructilactobacillus lindneri |
| 60 | 1252230 | 1252406 | - | NZ_AP022321.1 | Veillonella nakazawae |
| 61 | 1305974 | 1306150 | - | NZ_LR134375.1 | Veillonella dispar |
| 62 | 797570 | 797746 | + | NZ_LT906470.1 | Veillonella rodentium |
| 63 | 845128 | 845313 | + | NC_013894.1 | Thermocrinis albus DSM 14484 |
| 64 | 1031502 | 1031684 | + | NC_014377.1 | Thermosediminibacter oceani DSM 16646 |
| 65 | 402507 | 402686 | + | NZ_CP015519.1 | Syntrophotalea acetylenivorans |
| 66 | 1419168 | 1419353 | - | NZ_CP026328.2 | Acidithiobacillus caldus |
| 67 | 695115 | 695303 | + | NZ_CP029256.1 | Christensenella minuta |
| 68 | 1184675 | 1184857 | + | NZ_CP007452.1 | Peptoclostridium acidaminophilum DSM 3953 |
| 69 | 782745 | 782927 | - | NZ_LT635480.1 | Ndongobacter massiliensis |
| 70 | 1483349 | 1483537 | - | NC_015519.1 | Tepidanaerobacter acetatoxydans Re1 |
| 71 | 2537671 | 2537853 | - | NZ_CP028842.1 | Clostridium botulinum |
| 72 | 2800041 | 2800223 | - | NZ_CP011663.1 | Clostridium sporogenes |
| 73 | 406708 | 406887 | - | NZ_CP053988.1 | Abiotrophia defectiva |
| 74 | 1873945 | 1874130 | + | NC_008609.1 | Pelobacter propionicus DSM 2379 |
| 75 | 1052967 | 1053140 | + | NZ_CP016379.1 | Anoxybacter fermentans |
| 76 | 1300986 | 1301162 | - | NC_007503.1 | Carboxydothermus hydrogenoformans Z-2901 |
| 77 | 1961100 | 1961303 | + | NC_016048.1 | Oscillibacter valericigenes Sjm18-20 |
| 78 | 1716330 | 1716509 | - | NC_018664.1 | Gottschalkia acidurici 9a |
| 79 | 2951180 | 2951356 | - | NZ_CP014150.1 | Paeniclostridium sordellii |
| 80 | 621077 | 621259 | + | NZ_CP045563.1 | Fructilactobacillus sanfranciscensis |
| 81 | 1362718 | 1362906 | - | NZ_AP013035.1 | Thermosulfidibacter takaii ABI70S6 |
| 82 | 1817447 | 1817629 | - | NZ_CP014170.1 | Clostridium tyrobutyricum |
| 83 | 1798827 | 1799009 | + | NC_007517.1 | Geobacter metallireducens GS-15 |
| 84 | 2774579 | 2774764 | + | NZ_AP018795.1 | Acidithiobacillus ferridurans |
| 85 | 1661322 | 1661507 | + | NC_011761.1 | Acidithiobacillus ferrooxidans ATCC 23270 |
| 86 | 1175304 | 1175486 | + | NZ_CP020953.1 | Clostridium drakei |
| 87 | 672019 | 672201 | + | NZ_CP019981.1 | Pediococcus inopinatus |
| 88 | 1462250 | 1462426 | - | NC_012438.1 | Sulfurihydrogenibium azorense Az-Fu1 |
| 89 | 1406103 | 1406282 | + | NZ_CP014163.1 | Aerococcus urinaehominis |
| 90 | 239050 | 239232 | + | NZ_CP042909.1 | Thermosulfurimonas marina |
| 91 | 2285039 | 2285215 | + | NZ_CP059066.1 | Koleobacter methoxysyntrophicus |
| 92 | 136577 | 136759 | + | NZ_CP011803.1 | Clostridium carboxidivorans P7 |
| 93 | 3092726 | 3092908 | - | NZ_CP009933.1 | Clostridium scatologenes |
| 94 | 1775742 | 1775924 | + | NZ_CP009788.1 | Geobacter pickeringii |
| 95 | 1389351 | 1389536 | + | NZ_CP031115.1 | Rubrobacter indicoceani |
| 96 | 1219651 | 1219836 | + | NZ_CP040586.1 | Furfurilactobacillus rossiae |
| 97 | 2441976 | 2442158 | - | NZ_AP023049.1 | Alistipes indistinctus |
| 98 | 1630966 | 1631145 | + | NC_013204.1 | Eggerthella lenta DSM 2243 |
| 99 | 1402720 | 1402905 | + | NZ_CP007028.1 | Thermocrinis ruber |
| 100 | 1360416 | 1360607 | - | NC_013895.2 | Mageeibacillus indolicus UPII9-5 |
| 101 | 1557793 | 1557969 | + | NC_009922.1 | Alkaliphilus oremlandii OhILAs |
| 102 | 570419 | 570598 | + | NZ_CP045562.1 | Fructilactobacillus fructivorans |
| 103 | 1829739 | 1829921 | + | NZ_CP012294.1 | Pediococcus damnosus |
| 104 | 1117535 | 1117717 | - | NC_016605.1 | Pediococcus claussenii ATCC BAA-344 |
| 105 | 750013 | 750195 | + | NC_008525.1 | Pediococcus pentosaceus ATCC 25745 |
| 106 | 824255 | 824437 | + | NZ_CP053421.1 | Pediococcus acidilactici |
| 107 | 1136666 | 1136842 | + | NC_014657.1 | Caldicellulosiruptor owensensis OL |
| 108 | 707314 | 707490 | + | NC_015949.1 | Caldicellulosiruptor lactoaceticus 6A |
| 109 | 1498608 | 1498784 | - | NC_014652.1 | Caldicellulosiruptor hydrothermalis 108 |
| 110 | 1295284 | 1295460 | + | NC_014721.1 | Caldicellulosiruptor kristjanssonii I77R1B |
| 111 | 1614739 | 1614915 | - | NC_014720.1 | Caldicellulosiruptor kronotskyensis 2002 |
| 112 | 1349830 | 1350006 | + | NC_012034.1 | Caldicellulosiruptor bescii DSM 6725 |
| 113 | 3061365 | 3061565 | + | NZ_CP042430.1 | Baekduia soli |
| 114 | 1325807 | 1325986 | - | NZ_CP009170.1 | Thermoanaerobacter kivui |
| 115 | 1113778 | 1113951 | + | NC_011899.1 | Halothermothrix orenii H 168 |
| 116 | 1379887 | 1380069 | + | NZ_AP017470.1 | Thermotomaculum hydrothermale |
| 117 | 815410 | 815601 | - | NC_015387.1 | Marinithermus hydrothermalis DSM 14884 |
| 118 | 2269818 | 2270000 | - | NZ_CP010028.1 | Deinococcus radiopugnans |
| 119 | 2088631 | 2088816 | - | NZ_HG917868.1 | Clostridium bornimense |
| 120 | 1670019 | 1670201 | + | NZ_CP010311.1 | Geoalkalibacter subterraneus |
| 121 | 187141 | 187332 | - | NC_011059.1 | Prosthecochloris aestuarii DSM 271 |
| 122 | 1647166 | 1647345 | - | NZ_LT635772.1 | Anaerococcus mediterraneensis |
| 123 | 4827568 | 4827741 | - | NZ_CP026520.1 | Paenibacillus chitinolyticus |
| 124 | 1009182 | 1009361 | + | NZ_CP030105.1 | Lactiplantibacillus plantarum |
| 125 | 1619826 | 1620005 | + | NZ_CP032757.1 | Lactiplantibacillus pentosus |
| 126 | 2145973 | 2146155 | - | NZ_CP009687.1 | Clostridium aceticum |
| 127 | 3816233 | 3816412 | - | NC_018068.1 | Desulfosporosinus acidiphilus SJ4 |
| 128 | 2904453 | 2904632 | - | NC_016627.1 | Acetivibrio clariflavus DSM 19732 |
| 129 | 890727 | 890909 | + | NZ_CP017237.1 | Moorella thermoacetica |
| 130 | 47802 | 47978 | + | NZ_LR130778.1 | Petrocella atlantisensis |
| 131 | 1375769 | 1375948 | + | NZ_CP045851.1 | Actinomarinicola tropica |
| 132 | 1418001 | 1418177 | - | NC_014392.1 | Caldicellulosiruptor obsidiansis OB47 |
| 133 | 2001719 | 2001904 | - | NC_017956.1 | Tistrella mobilis KA081020-065 |
| 134 | 2085910 | 2086083 | + | NZ_CP020773.1 | Staphylococcus lutrae |
| 135 | 878822 | 878995 | + | NC_014925.1 | Staphylococcus pseudintermedius HKU10-03 |
| 136 | 1512956 | 1513132 | - | NC_014614.1 | Acetoanaerobium sticklandii |
| 137 | 1560680 | 1560862 | - | NZ_CP031500.1 | Deinococcus radiodurans |
| 138 | 1968769 | 1968951 | - | NC_009828.1 | Pseudothermotoga lettingae TMO |
| 139 | 2003938 | 2004120 | - | NC_022792.1 | Pseudothermotoga elfii DSM 9442 = NBRC 107921 |
| 140 | 770235 | 770426 | - | NC_000918.1 | Aquifex aeolicus VF5 |
| 141 | 762505 | 762687 | + | NZ_AP014945.1 | Caldimicrobium thiodismutans |
| 142 | 2395242 | 2395424 | - | NZ_CP020559.1 | Clostridium formicaceticum |
| 143 | 1812295 | 1812474 | + | NZ_CP049740.1 | Jeotgalibaca arthritidis |
| 144 | 1598936 | 1599109 | + | NZ_CP027770.1 | Staphylococcus felis |
| 145 | 1843396 | 1843578 | + | NZ_CP029494.1 | Deinococcus irradiatisoli |
| 146 | 1052505 | 1052684 | + | NZ_CP017267.1 | Vagococcus teuberi |
| 147 | 1018288 | 1018467 | + | NZ_CP011402.1 | Denitrobacterium detoxificans |
| 148 | 1556094 | 1556270 | - | NZ_CP018180.1 | Liquorilactobacillus nagelii |
| 149 | 2315011 | 2315190 | + | NZ_CP034465.1 | Jeotgalibaca ciconiae |
| 150 | 984332 | 984517 | + | NZ_CP045571.1 | Acidithiobacillus thiooxidans ATCC 19377 |
| 151 | 2501011 | 2501193 | - | NC_011898.1 | Ruminiclostridium cellulolyticum H10 |
| 152 | 189735 | 189926 | - | NC_010803.1 | Chlorobium limicola DSM 245 |
| 153 | 2135682 | 2135864 | - | NZ_CP019698.1 | Desulfotomaculum ferrireducens |
| 154 | 1483640 | 1483825 | - | NZ_CP013988.1 | Aerococcus urinaeequi |
| 155 | 707068 | 707253 | + | NZ_CP014164.1 | Aerococcus viridans |
| 156 | 182741 | 182935 | - | NZ_CP034413.2 | Dysosmobacter welbionis |
| 157 | 1874669 | 1874869 | + | NZ_CP040840.1 | Leptospira weilii |
| 158 | 722697 | 722879 | - | NC_012440.1 | Persephonella marina EX-H1 |
| 159 | 1455052 | 1455237 | + | NC_015942.1 | Acidithiobacillus ferrivorans SS3 |
| 160 | 1753959 | 1754144 | + | NC_015589.1 | Desulfotomaculum ruminis DSM 2154 |
| 161 | 1495256 | 1495453 | + | NZ_CP048436.1 | Flavonifractor plautii |
| 162 | 2971550 | 2971729 | - | NZ_CP014912.1 | Secundilactobacillus paracollinoides |
| 163 | 1219759 | 1219935 | + | NC_018025.1 | Desulfomonile tiedjei DSM 6799 |
| 164 | 1299799 | 1299981 | + | NZ_AP014510.1 | Thermotoga profunda AZM34c06 |
| 165 | 3479123 | 3479323 | + | NZ_CP033614.1 | Leptospira kmetyi |
| 166 | 972177 | 972377 | - | NZ_CP020414.2 | Leptospira interrogans serovar Copenhageni |
| 167 | 1135739 | 1135918 | - | NZ_CP044534.1 | Limosilactobacillus frumenti |
| 168 | 600157 | 600345 | + | NC_015436.1 | Sphaerochaeta coccoides DSM 17374 |
| 169 | 3587321 | 3587521 | - | NZ_CP030142.1 | Leptospira mayottensis |
| 170 | 1102657 | 1102836 | + | NC_022567.1 | Adlercreutzia equolifaciens DSM 19450 |
| 171 | 163866 | 164048 | - | NZ_CP011387.1 | Deinococcus puniceus |
| 172 | 2840264 | 2840440 | - | NC_021184.1 | Desulfoscipio gibsoniae DSM 7213 |
| 173 | 1310958 | 1311131 | + | NZ_CP021850.1 | Pseudoclostridium thermosuccinogenes |
| 174 | 2179174 | 2179359 | - | NZ_CP007451.1 | Draconibacterium orientale |
| 175 | 2863756 | 2863956 | - | NZ_CP026671.1 | Leptospira borgpetersenii serovar Ceylonica |
| 176 | 3382287 | 3382469 | + | NZ_AP021874.1 | Desulfosarcina alkanivorans |
| 177 | 1471418 | 1471594 | - | NZ_CP034791.1 | Caldicellulosiruptor changbaiensis |
| 178 | 1968030 | 1968206 | + | NC_009437.1 | Caldicellulosiruptor saccharolyticus DSM 8903 |
| 179 | 1147125 | 1147304 | - | NZ_CP045530.1 | Limosilactobacillus pontis |
| 180 | 1804192 | 1804368 | - | NZ_CP024955.1 | Kyrpidia spormannii |
| 181 | 1206918 | 1207097 | - | NZ_CP045240.1 | Limosilactobacillus vaginalis |
| 182 | 2275113 | 2275295 | - | NC_009253.1 | Desulfotomaculum reducens MI-1 |
| 183 | 245826 | 246008 | - | NZ_CP013910.1 | Deinococcus actinosclerus |
| 184 | 2505426 | 2505605 | - | NC_016894.1 | Acetobacterium woodii DSM 1030 |
| 185 | 2605864 | 2606046 | + | NC_014212.1 | Meiothermus silvanus DSM 9946 |
| 186 | 630431 | 630619 | + | NZ_CP014161.1 | Aerococcus urinae |
| 187 | 1178578 | 1178751 | + | NZ_CP033460.1 | Staphylococcus debuckii |
| 188 | 1776610 | 1776798 | - | NZ_CP017713.1 | Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 |
| 189 | 2190921 | 2191100 | - | NZ_CP010802.1 | Desulfuromonas soudanensis |
| 190 | 147710 | 147901 | - | NC_007512.1 | Pelodictyon luteolum DSM 273 |
| 191 | 1124011 | 1124193 | - | NC_019793.1 | Deinococcus peraridilitoris DSM 19664 |
| 192 | 997839 | 998018 | - | NZ_AP019367.1 | Parolsenella catena |
| 193 | 569602 | 569784 | - | NZ_CP010822.1 | Thermus aquaticus Y51MC23 |
| 194 | 2049283 | 2049465 | - | NZ_CP011389.1 | Deinococcus soli (ex Cha et al. 2016) |
| 195 | 926536 | 926715 | + | NZ_AP014680.1 | Paucilactobacillus hokkaidonensis JCM 18461 |
| 196 | 2641561 | 2641740 | - | NC_014365.1 | Desulfarculus baarsii DSM 2075 |
| 197 | 620203 | 620385 | - | NC_019386.1 | Thermus oshimai JL-2 |
| 198 | 2386203 | 2386385 | - | NZ_CP038452.1 | Thermus caldilimi |
| 199 | 883342 | 883521 | + | NZ_LT635455.1 | Olsenella timonensis |
| 200 | 623339 | 623524 | + | NZ_CP011801.1 | Nitrospira moscoviensis |
| 201 | 1204701 | 1204889 | - | NC_023065.1 | Magnetospirillum gryphiswaldense MSR-1 v2 |
| 202 | 1453976 | 1454152 | + | NC_014098.1 | Kyrpidia tusciae DSM 2912 |
| 203 | 3071019 | 3071201 | + | NC_017790.1 | Deinococcus gobiensis I-0 |
| 204 | 6400738 | 6400911 | - | NC_017672.3 | Paenibacillus mucilaginosus K02 |
| 205 | 725284 | 725457 | + | NZ_CP045927.1 | Staphylococcus agnetis |
| 206 | 1788692 | 1788865 | - | NZ_CP008747.1 | Staphylococcus hyicus |
| 207 | 1200984 | 1201172 | + | NZ_CP031518.1 | Treponema ruminis |
| 208 | 396721 | 396903 | - | NC_006461.1 | Thermus thermophilus HB8 |
| 209 | 3136957 | 3137145 | + | NZ_CP035807.1 | Thiospirochaeta perfilievii |
| 210 | 2557118 | 2557300 | + | NC_007626.1 | Magnetospirillum magneticum AMB-1 |
| 211 | 1686010 | 1686195 | + | NZ_LT828648.1 | Nitrospira japonica |
| 212 | 3925484 | 3925678 | - | NC_013739.1 | Conexibacter woesei DSM 14684 |
| 213 | 5381 | 5569 | - | NZ_CP012033.1 | Levilactobacillus koreensis |
| 214 | 13862 | 14044 | + | NC_008025.1 | Deinococcus geothermalis DSM 11300 |
| 215 | 1421752 | 1421934 | - | NC_015555.1 | Thermoanaerobacterium xylanolyticum LX-11 |
| 216 | 1498647 | 1498829 | - | NZ_CP047602.1 | Thermoanaerobacterium aotearoense |
| 217 | 1959631 | 1959828 | - | NC_017079.1 | Caldilinea aerophila DSM 14535 = NBRC 104270 |
| 218 | 2534925 | 2535104 | - | NC_009943.1 | Desulfococcus oleovorans Hxd3 |
| 219 | 3036211 | 3036399 | + | NC_014221.1 | Truepera radiovictrix DSM 17093 |
| 220 | 2870716 | 2870895 | + | NC_018178.1 | Melioribacter roseus P3M-2 |
| 221 | 4998737 | 4998922 | - | NZ_CP055156.1 | Adhaeribacter swui |
| 222 | 1785592 | 1785777 | - | NZ_CP055153.1 | Adhaeribacter radiodurans |
| 223 | 1579642 | 1579809 | + | NZ_CP014141.1 | Thermus parvatiensis |
| 224 | 1498932 | 1499114 | - | NC_014410.1 | Thermoanaerobacterium thermosaccharolyticum DSM 571 |
| 225 | 1906456 | 1906644 | - | NC_014960.1 | Anaerolinea thermophila UNI-1 |
| 226 | 1318504 | 1318683 | - | NZ_CP045605.1 | Limosilactobacillus reuteri |
| 227 | 1594787 | 1594975 | - | NC_015732.1 | Treponema caldarium DSM 7334 |
| 228 | 743797 | 743970 | + | NZ_LT906464.1 | Staphylococcus muscae |
| 229 | 913872 | 914054 | + | NZ_CP011232.1 | Kosmotoga pacifica |
| 230 | 1112459 | 1112632 | + | NZ_LR134304.1 | Staphylococcus schweitzeri |
| 231 | 4796897 | 4797082 | + | NZ_CP030265.1 | Skermanella pratensis |
| 232 | 197494 | 197685 | - | NC_011060.1 | Pelodictyon phaeoclathratiforme BU-1 |
| 233 | 798740 | 798931 | + | NC_011297.1 | Dictyoglomus thermophilum H-6-12 |
| 234 | 2112666 | 2112848 | + | NC_015161.1 | Deinococcus proteolyticus MRP |
| 235 | 922348 | 922533 | - | NZ_CP024727.1 | Prevotella intermedia |
| 236 | 1146914 | 1147090 | - | NC_016630.1 | Filifactor alocis ATCC 35896 |
| 237 | 721994 | 722170 | - | NC_016630.1 | Filifactor alocis ATCC 35896 |
| 238 | 292378 | 292560 | + | NZ_CP021081.1 | Deinococcus ficus |
| 239 | 1150431 | 1150637 | + | NZ_CP019937.1 | Ketogulonicigenium robustum |
| 240 | 4228427 | 4228606 | - | NC_013757.1 | Geodermatophilus obscurus DSM 43160 |
| 241 | 818903 | 819085 | + | NC_011653.1 | Thermosipho africanus TCF52B |
| 242 | 652334 | 652516 | + | NC_015388.1 | Desulfobacca acetoxidans DSM 11109 |
| 243 | 1215056 | 1215235 | - | NC_015389.1 | Coriobacterium glomerans PW2 |
| 244 | 1999192 | 1999383 | + | NC_002932.3 | Chlorobaculum tepidum TLS |
| 245 | 151834 | 152025 | - | NC_011027.1 | Chlorobaculum parvum NCIB 8327 |
| 246 | 2189694 | 2189885 | - | NZ_CP059603.1 | Levilactobacillus suantsaii |
| 247 | 4106415 | 4106603 | - | NZ_CP018099.1 | Caldithrix abyssi DSM 13497 |
| 248 | 2605547 | 2605738 | + | NZ_CP017305.1 | Chlorobaculum limnaeum |
| 249 | 1241516 | 1241692 | - | NZ_CP034726.1 | Acetilactobacillus jinshanensis |
| 250 | 371238 | 371417 | - | NZ_LT635475.1 | Ezakiella massiliensis |
| 251 | 1672606 | 1672791 | - | NC_015500.1 | Treponema brennaborense DSM 12168 |
| 252 | 7872005 | 7872187 | - | NZ_CP036274.1 | Anatilimnocola aggregata |
| 253 | 3204605 | 3204784 | - | NZ_CP036250.1 | Egicoccus halophilus |
| 254 | 655988 | 656170 | + | NC_014958.1 | Deinococcus maricopensis DSM 21211 |
| 255 | 1591605 | 1591787 | - | NZ_CP034118.1 | Staphylospora marina |
| 256 | 150096 | 150278 | - | NC_012526.1 | Deinococcus deserti VCD115 |
| 257 | 2183816 | 2183989 | - | NZ_CP048103.1 | Kroppenstedtia eburnea |
| 258 | 723129 | 723335 | + | NC_010644.1 | Elusimicrobium minutum Pei191 |
| 259 | 7703036 | 7703236 | + | NZ_CP042425.1 | Limnoglobus roseus |
| 260 | 2754307 | 2754480 | - | NZ_LS483476.1 | Lederbergia lentus |
| 261 | 2092662 | 2092847 | - | NZ_CP030840.1 | Acidisarcina polymorpha |
| 262 | 2856026 | 2856217 | + | NC_008639.1 | Chlorobium phaeobacteroides DSM 266 |
| 263 | 3952769 | 3952957 | - | NC_018645.1 | Desulfobacula toluolica Tol2 |
| 264 | 2286089 | 2286268 | - | NC_017464.1 | Ignavibacterium album JCM 16511 |
| 265 | 2873238 | 2873411 | - | NZ_CP070511.1 | Parageobacillus toebii |
| 266 | 1709708 | 1709881 | + | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 267 | 2580181 | 2580351 | + | NZ_CP026363.1 | Brevibacillus agri |
| 268 | 2370650 | 2370820 | + | NZ_LR134338.1 | Brevibacillus brevis |
| 269 | 2970929 | 2971108 | - | NZ_CP022121.1 | Dehalobacterium formicoaceticum |
| 270 | 1094202 | 1094369 | + | NC_014378.1 | Acetohalobium arabaticum DSM 5501 |
| 271 | 1977511 | 1977708 | + | NZ_CP051131.1 | Parasphingopyxis algicola |
| 272 | 2535783 | 2535959 | - | NC_015275.1 | Cellulosilyticum lentocellum DSM 5427 |
| 273 | 5877046 | 5877234 | - | NZ_CP035758.1 | Ktedonosporobacter rubrisoli |
| 274 | 1023814 | 1024002 | + | NZ_LS483405.1 | Levilactobacillus brevis |
| 275 | 2144480 | 2144671 | - | NZ_AP018437.1 | Pelolinea submarina |
| 276 | 1136158 | 1136340 | - | NC_017059.1 | Pararhodospirillum photometricum DSM 122 |
| 277 | 8325979 | 8326161 | - | NZ_CP007155.1 | Kutzneria albida DSM 43870 |
| 278 | 10899374 | 10899562 | + | NZ_CP012333.1 | Labilithrix luteola |
| 279 | 644575 | 644769 | + | NC_016024.1 | Chloracidobacterium thermophilum B |
| 280 | 3957482 | 3957658 | - | NC_013510.1 | Thermomonospora curvata DSM 43183 |
| 281 | 1402114 | 1402299 | + | NC_008148.1 | Rubrobacter xylanophilus DSM 9941 |
| 282 | 587847 | 588044 | + | NC_018024.1 | Acetomicrobium mobile DSM 13181 |
| 283 | 895185 | 895364 | - | NZ_CP022889.1 | Tsuneonella mangrovi |
| 284 | 7713185 | 7713367 | - | NZ_CP042914.1 | Roseimaritima ulvae |
| 285 | 35570 | 35767 | + | NZ_CP030356.1 | Salinibacter ruber |
| 286 | 1741032 | 1741214 | + | NZ_CP014525.1 | Haematospirillum jordaniae |
| 287 | 2162096 | 2162275 | + | NC_010337.2 | Heliomicrobium modesticaldum Ice1 |
| 288 | 473145 | 473324 | + | NZ_CP009761.1 | Parvimonas micra |
| 289 | 1043147 | 1043323 | + | NC_018870.1 | Thermacetogenium phaeum DSM 12270 |
| 290 | 2040259 | 2040438 | + | NC_008576.1 | Magnetococcus marinus MC-1 |
| 291 | 872238 | 872426 | + | NC_015714.1 | Treponema paraluiscuniculi Cuniculi A |
| 292 | 790989 | 791171 | + | NZ_CP045508.1 | Desulfolutivibrio sulfoxidireducens |
| 293 | 1958454 | 1958639 | - | NZ_LR215980.1 | Paraprevotella xylaniphila YIT 11841 |
| 294 | 4064257 | 4064436 | - | NC_011830.1 | Desulfitobacterium hafniense DCB-2 |
| 295 | 453797 | 453991 | - | NC_018720.1 | Bifidobacterium asteroides PRL2011 |
| 296 | 3654768 | 3654950 | - | NZ_AP023367.1 | Anaerocolumna cellulosilytica |
| 297 | 2312369 | 2312548 | - | NZ_CP007032.1 | Desulfitobacterium metallireducens DSM 15288 |
| 298 | 3629802 | 3629984 | + | NZ_CP045504.1 | Desulfovibrio sulfodismutans DSM 3696 |
| 299 | 3328085 | 3328267 | - | NZ_CP022464.2 | Enterocloster bolteae |
| 300 | 9086164 | 9086337 | + | NZ_AP022870.1 | Phytohabitans flavus |
| 301 | 5652736 | 5652915 | + | NZ_AP021861.1 | Lacipirellula parvula |
| 302 | 4964500 | 4964682 | - | NZ_CP015235.1 | Rhodococcus fascians D188 |
| 303 | 2313017 | 2313196 | - | NZ_AP019389.1 | Qipengyuania flava |
| 304 | 2535175 | 2535354 | - | NZ_CP031357.1 | Erythrobacter aureus |
| 305 | 2790836 | 2791042 | + | NZ_CP019437.1 | Thioclava nitratireducens |
| 306 | 2250311 | 2250505 | - | NC_015588.1 | Isoptericola variabilis 225 |
| 307 | 1130103 | 1130282 | + | NZ_CP046996.1 | Dehalobacter restrictus |
| 308 | 2631019 | 2631225 | + | NZ_CP053562.1 | Thioclava electrotropha |
| 309 | 3843228 | 3843422 | - | NZ_CP042912.1 | Mariniblastus fucicola |
| 310 | 1203620 | 1203814 | + | NZ_LT906453.1 | Dermatophilus congolensis |
| 311 | 156745 | 156927 | + | NC_005027.1 | Rhodopirellula baltica SH 1 |
| 312 | 1555259 | 1555438 | - | NZ_CP011805.1 | Pelagerythrobacter marensis |
| 313 | 3020453 | 3020635 | - | NZ_CP042582.1 | Hypericibacter adhaerens |
| 314 | 1787810 | 1787998 | - | NC_015681.1 | Thermodesulfatator indicus DSM 15286 |
| 315 | 1916199 | 1916381 | + | NZ_AP018920.1 | Pseudonocardia autotrophica |
| 316 | 4116117 | 4116299 | - | NZ_CP048000.1 | Anaerocolumna sedimenticola |
| 317 | 2131949 | 2132131 | - | NZ_CP061007.1 | Saccharopolyspora spinosa |
| 318 | 7924476 | 7924658 | + | NZ_CP031142.1 | Saccharopolyspora pogona |
| 319 | 2459327 | 2459506 | + | NZ_CP024920.1 | Qipengyuania seohaensis |
| 320 | 1208599 | 1208778 | - | NC_015318.1 | Hippea maritima DSM 10411 |
| 321 | 851166 | 851348 | + | NZ_CP018799.1 | Mariprofundus aestuarium |
| 322 | 264938 | 265132 | - | NZ_AP012325.1 | Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043 |
| 323 | 311649 | 311843 | - | NZ_CP025199.1 | Bifidobacterium pseudocatenulatum |
| 324 | 1173982 | 1174164 | + | NZ_CP017057.1 | Erythrobacter litoralis |
| 325 | 1276465 | 1276644 | + | NZ_CP015963.1 | Altererythrobacter ishigakiensis |
| 326 | 1432210 | 1432392 | + | NC_011837.1 | Clostridium kluyveri NBRC 12016 |
| 327 | 3661909 | 3662094 | - | NC_011831.1 | Chloroflexus aggregans DSM 9485 |
| 328 | 1314913 | 1315119 | - | NZ_CP012908.1 | Ketogulonicigenium vulgare |
| 329 | 1593344 | 1593523 | - | NZ_CP012669.1 | Altererythrobacter epoxidivorans |
| 330 | 1816550 | 1816729 | + | NZ_CP046400.1 | Pseudodesulfovibrio cashew |
| 331 | 1163949 | 1164155 | + | NZ_CP045201.1 | Pseudopuniceibacterium antarcticum |
| 332 | 5229953 | 5230126 | + | NZ_AP022871.1 | Phytohabitans suffuscus |
| 333 | 1504173 | 1504355 | - | NZ_CP018800.1 | Mariprofundus ferrinatatus |
| 334 | 3445807 | 3445986 | - | NC_009380.1 | Salinispora tropica CNB-440 |
| 335 | 4681865 | 4682038 | + | NZ_CP009922.3 | Streptomyces xiamenensis |
| 336 | 442707 | 442886 | - | NZ_CP053921.1 | Erythrobacter mangrovi |
| 337 | 2052681 | 2052863 | - | NZ_CP016545.1 | Paraurantiacibacter namhicola |
| 338 | 1845472 | 1845651 | - | NC_016803.1 | Pseudodesulfovibrio mercurii |
| 339 | 4836705 | 4836893 | + | NC_018014.1 | Terriglobus roseus DSM 18391 |
| 340 | 4780467 | 4780640 | + | NZ_CP054938.1 | Streptomyces harbinensis |
| 341 | 1660735 | 1660920 | + | NC_010001.1 | Lachnoclostridium phytofermentans ISDg |
| 342 | 1551855 | 1552058 | + | NZ_CP044117.1 | Roseomonas mucosa |
| 343 | 456012 | 456191 | - | NC_006055.1 | Mesoplasma florum L1 |
| 344 | 503440 | 503619 | - | NZ_CP024964.1 | Entomoplasma melaleucae |
| 345 | 512482 | 512661 | - | NZ_CP024969.1 | Mesoplasma tabanidae |
| 346 | 472750 | 472929 | - | NZ_CP024411.1 | Mesoplasma entomophilum |
| 347 | 501574 | 501753 | - | NZ_CP023173.1 | Mesoplasma chauliocola |
| 348 | 1031357 | 1031542 | - | NZ_CP036433.1 | Lignipirellula cremea |
| 349 | 10098724 | 10098906 | - | NZ_CP012752.1 | Kibdelosporangium phytohabitans |
| 350 | 770862 | 771068 | + | NZ_CP051181.1 | Thalassobius gelatinovorus |
| 351 | 1709030 | 1709215 | + | NC_016751.1 | Marinitoga piezophila KA3 |
| 352 | 3260292 | 3260489 | - | NC_013501.1 | Rhodothermus marinus DSM 4252 |
| 353 | 779739 | 779945 | + | NZ_CP049037.1 | Pseudohalocynthiibacter aestuariivivens |
| 354 | 1990848 | 1991054 | + | NZ_CP035510.1 | Haematobacter massiliensis |
| 355 | 1988215 | 1988421 | + | NZ_CP034348.1 | Roseovarius faecimaris |
| 356 | 707125 | 707331 | - | NZ_CP060436.1 | Pseudooceanicola algae |
| 357 | 1942996 | 1943202 | + | NZ_CP010855.1 | Marinovum algicola DG 898 |
| 358 | 2979542 | 2979745 | + | NZ_LN606600.1 | Acetobacter senegalensis |
| 359 | 1285529 | 1285726 | + | NC_015671.1 | Cellulomonas gilvus ATCC 13127 |
| 360 | 3566397 | 3566603 | - | NZ_CP015093.1 | Salipiger abyssi |
| 361 | 1615903 | 1616091 | + | NZ_CP048877.1 | Thermosulfuriphilus ammonigenes |
| 362 | 2061734 | 2061940 | - | NZ_CP036289.1 | Bremerella volcania |
| 363 | 3257789 | 3257968 | - | NC_014165.1 | Thermobispora bispora DSM 43833 |
| 364 | 1927486 | 1927653 | - | NZ_AP024085.1 | Faecalibacillus intestinalis |
| 365 | 7911925 | 7912107 | - | NC_019673.1 | Saccharothrix espanaensis DSM 44229 |
| 366 | 1416340 | 1416525 | + | NC_015152.1 | Sphaerochaeta globosa str. Buddy |
| 367 | 2312941 | 2313123 | + | NZ_AP023396.1 | Nocardia wallacei |
| 368 | 6866991 | 6867173 | - | NZ_CP023445.1 | Actinosynnema pretiosum |
| 369 | 7010385 | 7010567 | - | NC_013093.1 | Actinosynnema mirum DSM 43827 |
| 370 | 1723039 | 1723245 | - | NZ_CP034588.1 | Silicimonas algicola |
| 371 | 128608 | 128811 | - | NZ_CP038141.1 | Swingsia samuiensis |
| 372 | 1061168 | 1061371 | - | NC_016027.1 | Komagataeibacter medellinensis NBRC 3288 |
| 373 | 875448 | 875651 | - | NZ_CP019875.1 | Komagataeibacter nataicola |
| 374 | 2298754 | 2298957 | - | NZ_CP050139.1 | Komagataeibacter rhaeticus |
| 375 | 1216211 | 1216414 | - | NZ_CP036404.1 | Komagataeibacter saccharivorans |
| 376 | 5314990 | 5315184 | - | NC_010162.1 | Sorangium cellulosum So ce56 |
| 377 | 2146004 | 2146195 | - | NZ_CP012836.1 | Algoriphagus sanaruensis |
| 378 | 2361632 | 2361835 | + | NZ_CP029176.1 | Acidibrevibacterium fodinaquatile |
| 379 | 1775940 | 1776098 | - | NC_008578.1 | Acidothermus cellulolyticus 11B |
| 380 | 9549913 | 9550095 | - | NZ_CP034550.1 | Saccharothrix syringae |
| 381 | 540816 | 541001 | - | NC_016633.1 | Sphaerochaeta pleomorpha str. Grapes |
| 382 | 2516040 | 2516219 | - | NC_007794.1 | Novosphingobium aromaticivorans DSM 12444 |
| 383 | 1562645 | 1562827 | + | NZ_CP022752.1 | Actinopolyspora erythraea |
| 384 | 4623338 | 4623517 | - | NC_014391.1 | Micromonospora aurantiaca ATCC 27029 |
| 385 | 1416643 | 1416834 | - | NZ_CP043661.1 | Kribbella qitaiheensis |
| 386 | 2471858 | 2472061 | - | NZ_CP053708.1 | Lichenicola cladoniae |
| 387 | 4218306 | 4218494 | - | NZ_CP036299.1 | Planctopirus ephydatiae |
| 388 | 3339339 | 3339527 | - | NC_014148.1 | Planctopirus limnophila DSM 3776 |
| 389 | 1425027 | 1425194 | - | NC_019978.1 | Halobacteroides halobius DSM 5150 |
| 390 | 5263859 | 5264044 | - | NZ_CP015136.1 | Luteitalea pratensis |
| 391 | 2132555 | 2132749 | - | NC_014330.1 | Brachyspira pilosicoli 95/1000 |
| 392 | 1979644 | 1979838 | + | NC_014150.1 | Brachyspira murdochii DSM 12563 |
| 393 | 5881608 | 5881796 | + | NZ_CP022203.1 | Corallococcus macrosporus DSM 14697 |
| 394 | 6051119 | 6051301 | - | NZ_CP016076.1 | Actinoalloteichus fjordicus |
| 395 | 5973629 | 5973817 | + | NC_008095.1 | Myxococcus xanthus DK 1622 |
| 396 | 2508259 | 2508447 | - | NZ_CP012109.1 | Myxococcus hansupus |
| 397 | 2071186 | 2071368 | + | NC_020520.1 | Ilumatobacter coccineus YM16-304 |
| 398 | 8810057 | 8810236 | - | NC_013595.1 | Streptosporangium roseum DSM 43021 |
| 399 | 5544773 | 5544955 | - | NZ_CP022521.1 | Actinoalloteichus hoggarensis |
| 400 | 1915478 | 1915669 | + | NZ_LT996886.1 | Tessaracoccus timonensis |
| 401 | 1093444 | 1093626 | - | NZ_CP036402.1 | Egibacter rhizosphaerae |
| 402 | 3156156 | 3156344 | - | NC_006138.1 | Desulfotalea psychrophila LSv54 |
| 403 | 2510308 | 2510490 | + | NZ_AP023172.1 | Rhodococcus qingshengii |
| 404 | 3509977 | 3510159 | - | NZ_CP027793.1 | Rhodococcus hoagii |
| 405 | 2452500 | 2452682 | + | NZ_CP022208.1 | Rhodococcus pyridinivorans |
| 406 | 2045963 | 2046145 | + | NZ_LT906450.1 | Rhodococcus rhodochrous |
| 407 | 2082810 | 2082992 | + | NZ_CP029146.1 | Rhodococcus ruber |
| 408 | 8860251 | 8860433 | + | NZ_CP022088.2 | Nocardia brasiliensis |
| 409 | 4333614 | 4333796 | - | NC_006361.1 | Nocardia farcinica IFM 10152 |
| 410 | 1097461 | 1097643 | - | NZ_LS483468.1 | Rhodococcus coprophilus |
| 411 | 2519797 | 2519979 | - | NZ_CP048813.1 | Rhodococcus triatomae |
| 412 | 3228071 | 3228256 | - | NC_015564.1 | Hoyosella subflava DQS3-9A1 |
| 413 | 5735468 | 5735650 | - | NZ_LR134352.1 | Nocardia asteroides |
| 414 | 4854969 | 4855151 | - | NZ_CP018082.1 | Nocardia mangyaensis |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_006177.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF02620.19 | 0.77 | 320 | 30 | same-strand | Large ribosomal RNA subunit accumulation protein YceD |
++ More..