Result : Q600Z8
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 30S ribosomal protein S18 |
| NCBI Accession ID | AE017332.1 |
| Organism | Mycoplasma hyopneumoniae (strain 232) |
| Left | 351602 |
| Right | 351865 |
| Strand | - |
| Nucleotide Sequence | ATGAATAAAAAATACGCGAAAAAATTCAAAAAAAAACCATGTCAATTTTGTGAGGCTAAATTATTTTATATTGACTATAAAGACATCGAAGTTCTCCAGCGTTTTATTAATACTTTTGGGAAAATTCAACCCTCAAGAATTACTGGTAATTGCGCAAAACACCAAAGAAAATTAGCGCTTGCAGTTAAAAGAGCCCGTTTTGTGGCTCTTCTTCCTTTTATCGGTGATCGCATCCGTGGAAATTATGATAAAACCCGTGTCTAA |
| Sequence | MNKKYAKKFKKKPCQFCEAKLFYIDYKDIEVLQRFINTFGKIQPSRITGNCAKHQRKLALAVKRARFVALLPFIGDRIRGNYDKTRV |
| Source of smORF | Swiss-Prot |
| Function | Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit. {ECO:0000255|HAMAP-Rule:MF_00270}. |
| Pubmed ID | 15489423 |
| Domain | CDD:412341 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | Q600Z8 |
| ORF Length (Amino Acid) | 87 |
++ More..
| Conservation Analysis |
No. of Species: 234
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 414572 | 414835 | + | NC_021283.1 | Mycoplasma hyopneumoniae 168-L |
| 2 | 330782 | 331045 | - | NZ_CP007585.1 | Mycoplasma flocculare ATCC 27399 |
| 3 | 433487 | 433753 | + | NZ_CP024161.1 | Mycoplasma dispar |
| 4 | 586504 | 586770 | + | NZ_CP007154.1 | Mycoplasma bovoculi M165/69 |
| 5 | 777515 | 777766 | + | NZ_LR214951.1 | Mycoplasma neurolyticum |
| 6 | 292906 | 293160 | - | NC_006908.1 | Mycoplasma mobile 163K |
| 7 | 224770 | 225030 | - | NZ_LR214972.1 | Mycoplasmopsis bovirhinis |
| 8 | 526789 | 527049 | - | NZ_CP011368.1 | Mycoplasmopsis canis |
| 9 | 525831 | 526088 | - | NZ_LR215024.1 | Mycoplasmopsis glycophila |
| 10 | 337855 | 338109 | + | NC_014921.1 | Mycoplasmopsis fermentans M64 |
| 11 | 669259 | 669567 | - | NZ_CP034044.1 | Mycoplasma struthionis |
| 12 | 539928 | 540227 | - | NZ_CP029295.1 | Mycoplasma phocidae |
| 13 | 1377125 | 1377379 | - | NC_011661.1 | Dictyoglomus turgidum DSM 6724 |
| 14 | 1196796 | 1197050 | - | NC_011297.1 | Dictyoglomus thermophilum H-6-12 |
| 15 | 4795029 | 4795259 | - | NZ_CP036259.1 | Sporomusa termitida |
| 16 | 894474 | 894731 | - | NZ_CP041664.1 | Mycoplasma anserisalpingitidis |
| 17 | 41729 | 41953 | + | NZ_CP068564.1 | Keratinibaculum paraultunense |
| 18 | 1875143 | 1875379 | - | NZ_CP060713.1 | Nocardioides mesophilus |
| 19 | 93973 | 94239 | - | NZ_LR215039.1 | Mycoplasmopsis columboralis |
| 20 | 709588 | 709821 | + | NC_014652.1 | Caldicellulosiruptor hydrothermalis 108 |
| 21 | 1440231 | 1440461 | + | NZ_AP018449.1 | Methylomusa anaerophila |
| 22 | 644052 | 644276 | - | NC_011653.1 | Thermosipho africanus TCF52B |
| 23 | 357774 | 358004 | + | NC_018024.1 | Acetomicrobium mobile DSM 13181 |
| 24 | 5197161 | 5197397 | - | NZ_CP022295.1 | Nocardioides aromaticivorans |
| 25 | 1209566 | 1209844 | + | NZ_AP022847.1 | Nitrosophilus alvini |
| 26 | 657911 | 658171 | - | NZ_LS991951.1 | Mycoplasmopsis edwardii |
| 27 | 735820 | 736050 | - | NC_009718.1 | Fervidobacterium nodosum Rt17-B1 |
| 28 | 1071741 | 1071971 | + | NZ_CP059066.1 | Koleobacter methoxysyntrophicus |
| 29 | 53737 | 53994 | - | NZ_LR215032.1 | Mycoplasmopsis gallopavonis |
| 30 | 654614 | 654847 | + | NC_014720.1 | Caldicellulosiruptor kronotskyensis 2002 |
| 31 | 236215 | 236445 | + | NZ_CP048649.1 | Aminipila butyrica |
| 32 | 2222500 | 2222733 | - | NC_012034.1 | Caldicellulosiruptor bescii DSM 6725 |
| 33 | 41633 | 41857 | + | NZ_CP035130.1 | Gudongella oleilytica |
| 34 | 277635 | 277910 | + | NZ_CP040825.1 | Mycoplasma nasistruthionis |
| 35 | 48393 | 48617 | + | NZ_CP011856.1 | Spiroplasma eriocheiris |
| 36 | 262638 | 262871 | + | NZ_CP020921.1 | Thermodesulfobium acidiphilum |
| 37 | 286589 | 286822 | + | NC_015499.1 | Thermodesulfobium narugense DSM 14796 |
| 38 | 90325 | 90540 | + | NC_011898.1 | Ruminiclostridium cellulolyticum H10 |
| 39 | 65088 | 65303 | + | NC_011898.1 | Ruminiclostridium cellulolyticum H10 |
| 40 | 3025319 | 3025555 | - | NZ_CP041146.1 | Nocardioides humi |
| 41 | 678603 | 678827 | + | NZ_CP007389.1 | Thermosipho melanesiensis |
| 42 | 366402 | 366638 | - | NZ_CP022753.1 | Nocardiopsis gilva YIM 90087 |
| 43 | 622427 | 622699 | - | NZ_AP022826.1 | Nitrosophilus labii |
| 44 | 5591877 | 5592113 | - | NZ_CP009896.1 | Pimelobacter simplex |
| 45 | 34198 | 34422 | + | NZ_CP002082.1 | Spiroplasma mirum ATCC 29335 |
| 46 | 34198 | 34422 | + | NZ_CP011855.1 | Spiroplasma atrichopogonis |
| 47 | 2421206 | 2421472 | - | NZ_LT906477.1 | Clostridium cochlearium |
| 48 | 34603 | 34827 | + | NC_021284.1 | Spiroplasma syrphidicola EA-1 |
| 49 | 34630 | 34854 | + | NC_021280.1 | Spiroplasma chrysopicola DF-1 |
| 50 | 2247405 | 2247620 | - | NZ_CP012395.1 | Clostridium autoethanogenum DSM 10061 |
| 51 | 4615027 | 4615242 | - | NC_014328.1 | Clostridium ljungdahlii DSM 13528 |
| 52 | 3491162 | 3491398 | + | NZ_CP041091.1 | Nocardioides sambongensis |
| 53 | 150140 | 150406 | - | NZ_LR215036.1 | Mycoplasmopsis citelli |
| 54 | 910847 | 911071 | - | NZ_CP031088.1 | Spiroplasma phoeniceum P40 |
| 55 | 1442611 | 1442835 | - | NZ_CP010899.1 | Spiroplasma kunkelii CR2-3x |
| 56 | 1213096 | 1213320 | - | NZ_LR134523.1 | Peptoniphilus ivorii |
| 57 | 132249 | 132464 | + | NZ_CP061336.1 | Ruminiclostridium herbifermentans |
| 58 | 4150393 | 4150629 | - | NC_014165.1 | Thermobispora bispora DSM 43833 |
| 59 | 3033389 | 3033634 | - | NZ_CP046996.1 | Dehalobacter restrictus |
| 60 | 8757374 | 8757610 | - | NC_014666.1 | Frankia inefficax |
| 61 | 4744927 | 4745184 | - | NZ_CP015756.1 | Clostridium estertheticum subsp. estertheticum |
| 62 | 3025959 | 3026195 | + | NZ_CP044344.1 | Nocardioides cynanchi |
| 63 | 25252 | 25476 | + | NZ_CP013197.1 | Spiroplasma citri |
| 64 | 2531708 | 2531944 | + | NZ_CP038267.1 | Nocardioides euryhalodurans |
| 65 | 11238748 | 11238984 | - | NZ_CP045572.1 | Nonomuraea nitratireducens |
| 66 | 194241 | 194480 | + | NZ_CP014176.1 | Clostridium argentinense |
| 67 | 29111 | 29341 | + | NC_007503.1 | Carboxydothermus hydrogenoformans Z-2901 |
| 68 | 121468 | 121689 | + | NZ_CP021850.1 | Pseudoclostridium thermosuccinogenes |
| 69 | 1669060 | 1669296 | + | NZ_CP038436.1 | Nocardioides seonyuensis |
| 70 | 3880232 | 3880486 | - | NC_011837.1 | Clostridium kluyveri NBRC 12016 |
| 71 | 3790018 | 3790233 | - | NZ_CP040924.1 | Clostridium thermarum |
| 72 | 4584799 | 4585035 | - | NZ_CP059164.1 | Nocardioides ungokensis |
| 73 | 4552284 | 4552520 | - | NZ_CP049257.1 | Nocardioides anomalus |
| 74 | 5447816 | 5448031 | - | NZ_CP020953.1 | Clostridium drakei |
| 75 | 4596241 | 4596456 | - | NZ_CP011803.1 | Clostridium carboxidivorans P7 |
| 76 | 4473562 | 4473777 | + | NZ_CP009933.1 | Clostridium scatologenes |
| 77 | 1288835 | 1289071 | - | NZ_CP015079.1 | Nocardioides dokdonensis FR1436 |
| 78 | 1315568 | 1315831 | - | NC_013170.1 | Cryptobacterium curtum DSM 15641 |
| 79 | 781914 | 782174 | - | NZ_LR214986.1 | Mycoplasmopsis cynos |
| 80 | 374568 | 374804 | - | NC_013131.1 | Catenulispora acidiphila DSM 44928 |
| 81 | 3056858 | 3057073 | - | NZ_CP014170.1 | Clostridium tyrobutyricum |
| 82 | 1393144 | 1393383 | - | NC_016148.1 | Thermovirga lienii DSM 17291 |
| 83 | 4291693 | 4291923 | - | NC_014158.1 | Tsukamurella paurometabola DSM 20162 |
| 84 | 2019620 | 2019832 | - | NC_012778.1 | [Eubacterium] eligens ATCC 27750 |
| 85 | 4823655 | 4823885 | - | NZ_CP019066.1 | Tsukamurella tyrosinosolvens |
| 86 | 5244769 | 5245026 | - | NC_014393.1 | Clostridium cellulovorans 743B |
| 87 | 10304090 | 10304326 | - | NC_013595.1 | Streptosporangium roseum DSM 43021 |
| 88 | 2905063 | 2905284 | - | NZ_HG917868.1 | Clostridium bornimense |
| 89 | 7488820 | 7489053 | - | NC_013729.1 | Kribbella flavida DSM 17836 |
| 90 | 4288256 | 4288489 | - | NZ_CP043661.1 | Kribbella qitaiheensis |
| 91 | 861589 | 861855 | - | NC_013512.1 | Sulfurospirillum deleyianum DSM 6946 |
| 92 | 895015 | 895281 | - | NC_018002.1 | Sulfurospirillum barnesii SES-3 |
| 93 | 1152466 | 1152732 | - | NZ_CP017111.1 | Sulfurospirillum halorespirans DSM 13726 |
| 94 | 1075244 | 1075510 | - | NZ_CP007201.1 | Sulfurospirillum multivorans DSM 12446 |
| 95 | 307055 | 307282 | + | NC_014387.1 | Butyrivibrio proteoclasticus B316 |
| 96 | 1927161 | 1927397 | - | NZ_CP053564.1 | Pseudonocardia broussonetiae |
| 97 | 2805029 | 2805244 | - | NZ_CP032416.1 | Clostridium fermenticellae |
| 98 | 7201551 | 7201787 | - | NZ_AP018920.1 | Pseudonocardia autotrophica |
| 99 | 5092389 | 5092604 | - | NC_022571.1 | Clostridium saccharobutylicum DSM 13864 |
| 100 | 2860392 | 2860673 | + | NZ_CP061799.1 | Desulfonema limicola |
| 101 | 381280 | 381507 | + | NZ_CP009056.1 | Frischella perrara |
| 102 | 2855016 | 2855261 | - | NZ_CP016786.1 | Clostridium isatidis |
| 103 | 3764794 | 3765009 | + | NZ_CP030775.1 | Clostridium butyricum |
| 104 | 1749739 | 1749975 | + | NZ_AP019307.1 | Nocardioides baekrokdamisoli |
| 105 | 34146 | 34388 | + | NC_014925.1 | Staphylococcus pseudintermedius HKU10-03 |
| 106 | 1006534 | 1006800 | + | NZ_CP032489.1 | Arachidicoccus soli |
| 107 | 3290493 | 3290729 | - | NZ_CP061007.1 | Saccharopolyspora spinosa |
| 108 | 1711118 | 1711333 | - | NZ_CP023671.1 | Clostridium septicum |
| 109 | 863566 | 863790 | + | NC_013061.1 | Pedobacter heparinus DSM 2366 |
| 110 | 5143964 | 5144188 | + | NZ_CP024091.1 | Pedobacter ginsengisoli |
| 111 | 2868162 | 2868377 | - | NZ_CP027286.1 | Clostridium chauvoei |
| 112 | 1438462 | 1438689 | + | NZ_CP018099.1 | Caldithrix abyssi DSM 13497 |
| 113 | 5924001 | 5924216 | - | NZ_CP043998.1 | Clostridium diolis |
| 114 | 3790297 | 3790524 | - | NZ_AP014924.1 | Limnochorda pilosa |
| 115 | 2649836 | 2650069 | + | NZ_CP004388.1 | Thalassospira xiamenensis M-5 = DSM 17429 |
| 116 | 512925 | 513152 | + | NZ_CP025120.1 | Kangiella profundi |
| 117 | 577421 | 577648 | + | NC_013166.1 | Kangiella koreensis DSM 16069 |
| 118 | 1269151 | 1269366 | + | NZ_CP071376.1 | Clostridium gasigenes |
| 119 | 6683844 | 6684080 | + | NZ_CP031142.1 | Saccharopolyspora pogona |
| 120 | 2179982 | 2180245 | - | NZ_CP038029.1 | Sphingobacterium psychroaquaticum |
| 121 | 7053300 | 7053536 | - | NC_015312.1 | Pseudonocardia dioxanivorans CB1190 |
| 122 | 3335716 | 3335946 | - | NZ_CP024955.1 | Kyrpidia spormannii |
| 123 | 3368676 | 3368906 | - | NC_014098.1 | Kyrpidia tusciae DSM 2912 |
| 124 | 6514802 | 6515017 | - | NC_020291.1 | Clostridium saccharoperbutylacetonicum N1-4(HMT) |
| 125 | 2602863 | 2603096 | + | NZ_CP024199.1 | Thalassospira marina |
| 126 | 503201 | 503467 | - | NZ_CP042434.1 | Arachidicoccus ginsenosidivorans |
| 127 | 1483282 | 1483509 | - | NZ_AP021889.1 | Thiosulfatimonas sediminis |
| 128 | 24326 | 24547 | + | NZ_CP025057.1 | Spiroplasma floricola 23-6 |
| 129 | 1484998 | 1485249 | - | NZ_CP012836.1 | Algoriphagus sanaruensis |
| 130 | 1266489 | 1266731 | - | NZ_CP019342.1 | Nonlabens tegetincola |
| 131 | 2699284 | 2699514 | - | NC_014614.1 | Acetoanaerobium sticklandii |
| 132 | 2379484 | 2379738 | + | NZ_AP022599.1 | Mycolicibacterium pulveris |
| 133 | 5487242 | 5487508 | + | NZ_AP017422.1 | Filimonas lacunae |
| 134 | 1048281 | 1048508 | + | NZ_AP020335.1 | Hydrogenovibrio marinus |
| 135 | 4486055 | 4486309 | - | NZ_LT906469.1 | Mycolicibacter terrae |
| 136 | 1260438 | 1260668 | + | NZ_CP062147.1 | Komagataeibacter hansenii |
| 137 | 331023 | 331238 | + | NZ_HF545617.1 | Ruminococcus bicirculans |
| 138 | 3997930 | 3998163 | + | NZ_CP022957.1 | Maribacter cobaltidurans |
| 139 | 26934 | 27167 | - | NC_015844.1 | Zobellia galactanivorans |
| 140 | 3783939 | 3784193 | - | NZ_AP022609.1 | Mycolicibacter hiberniae |
| 141 | 2003683 | 2003937 | + | NZ_AP022562.1 | Mycobacterium novum |
| 142 | 4598562 | 4598816 | - | NC_015576.1 | Mycolicibacter sinensis |
| 143 | 1811933 | 1812187 | - | NZ_AP022589.1 | Mycolicibacter minnesotensis |
| 144 | 22619 | 22843 | + | NZ_CP022535.1 | Spiroplasma corruscae |
| 145 | 370402 | 370659 | - | NC_014759.1 | Marivirga tractuosa DSM 4126 |
| 146 | 1160674 | 1160901 | + | NZ_LR134510.1 | Actinobacillus delphinicola |
| 147 | 2830888 | 2831139 | - | NC_019904.1 | Echinicola vietnamensis DSM 17526 |
| 148 | 2696883 | 2697134 | - | NZ_CP040106.1 | Echinicola rosea |
| 149 | 2966256 | 2966507 | + | NC_008255.1 | Cytophaga hutchinsonii ATCC 33406 |
| 150 | 87201 | 87455 | - | NC_015387.1 | Marinithermus hydrothermalis DSM 14884 |
| 151 | 3203389 | 3203622 | + | NZ_CP031555.1 | Thalassospira indica |
| 152 | 4516958 | 4517209 | - | NZ_CP030041.1 | Echinicola strongylocentroti |
| 153 | 24037 | 24258 | + | NC_021846.1 | Spiroplasma taiwanense CT-1 |
| 154 | 3240554 | 3240796 | - | NC_008261.1 | Clostridium perfringens ATCC 13124 |
| 155 | 4804008 | 4804274 | - | NZ_CP042433.1 | Flavisolibacter ginsenosidimutans |
| 156 | 2580012 | 2580266 | - | NZ_AP022568.1 | Mycobacterium simiae |
| 157 | 2634711 | 2634953 | - | NZ_CP018776.1 | Staphylococcus condimenti |
| 158 | 2413825 | 2414079 | + | NZ_CP021330.1 | Maritalea myrionectae |
| 159 | 1236113 | 1236340 | + | NC_015275.1 | Cellulosilyticum lentocellum DSM 5427 |
| 160 | 4822669 | 4822923 | - | NZ_AP024310.1 | Mycobacterium heckeshornense |
| 161 | 5845258 | 5845512 | + | NZ_AP022613.1 | Mycobacterium conspicuum |
| 162 | 2558598 | 2558831 | + | NZ_CP032050.1 | Euzebyella marina |
| 163 | 2142399 | 2142662 | - | NZ_CP030848.1 | Sphingobacterium hotanense |
| 164 | 2795653 | 2795898 | - | NC_014833.1 | Ruminococcus albus 7 = DSM 20455 |
| 165 | 4495022 | 4495234 | - | NZ_AP022581.1 | Mycobacterium lacus |
| 166 | 3380961 | 3381212 | + | NC_018010.1 | Belliella baltica DSM 15883 |
| 167 | 1512895 | 1513149 | - | NZ_AP022606.1 | Mycobacterium branderi |
| 168 | 59122 | 59376 | + | NC_000962.3 | Mycobacterium tuberculosis H37Rv |
| 169 | 59174 | 59428 | + | NC_015848.1 | Mycobacterium canettii CIPT 140010059 |
| 170 | 69713 | 69967 | + | NZ_LR130759.1 | Mycobacterium basiliense |
| 171 | 686294 | 686548 | - | NZ_AP022572.1 | Mycobacterium shottsii |
| 172 | 69570 | 69824 | + | NZ_AP018410.1 | Mycobacterium pseudoshottsii JCM 15466 |
| 173 | 1555278 | 1555532 | + | NZ_CP058277.1 | Mycobacterium marinum |
| 174 | 23027 | 23251 | + | NZ_CP012328.1 | Spiroplasma turonicum |
| 175 | 4079322 | 4079579 | + | NZ_AP022620.1 | Mycolicibacterium anyangense |
| 176 | 2879933 | 2880196 | + | NZ_CP049246.1 | Sphingobacterium lactis |
| 177 | 4926551 | 4926817 | + | NZ_CP032157.1 | Paraflavitalea soli |
| 178 | 22798 | 23022 | + | NZ_CP012357.1 | Spiroplasma litorale |
| 179 | 81004 | 81258 | + | NZ_AP018164.1 | Mycobacterium shigaense |
| 180 | 24289 | 24510 | + | NZ_CP025543.1 | Spiroplasma monobiae MQ-1 |
| 181 | 3153542 | 3153796 | - | NZ_CP029543.1 | Mycobacterium leprae |
| 182 | 4044994 | 4045248 | - | NZ_AP022619.1 | Mycobacterium paraseoulense |
| 183 | 4429076 | 4429330 | + | NZ_AP022590.1 | Mycobacterium mantenii |
| 184 | 1698156 | 1698383 | + | NZ_CP015230.1 | Epibacterium mobile F1926 |
| 185 | 5360575 | 5360826 | - | NZ_CP012040.1 | Cyclobacterium amurskyense |
| 186 | 5324011 | 5324262 | - | NC_015914.1 | Cyclobacterium marinum DSM 745 |
| 187 | 1044371 | 1044616 | + | NC_014664.1 | Rhodomicrobium vannielii ATCC 17100 |
| 188 | 87364 | 87618 | + | NZ_CP025546.1 | Mycobacterium paragordonae |
| 189 | 1243933 | 1244166 | - | NZ_CP014525.1 | Haematospirillum jordaniae |
| 190 | 78823 | 79035 | + | NZ_CP009360.4 | Mycobacterium avium subsp. hominissuis |
| 191 | 69691 | 69945 | + | NZ_CP023147.1 | Mycobacterium marseillense |
| 192 | 76079 | 76333 | + | NC_016946.1 | Mycobacterium intracellulare ATCC 13950 |
| 193 | 76065 | 76319 | + | NC_016948.1 | Mycobacterium paraintracellulare |
| 194 | 1894405 | 1894659 | + | NZ_AP022583.1 | Mycobacterium noviomagense |
| 195 | 3932559 | 3932813 | + | NZ_AP022575.1 | Mycobacterium shinjukuense |
| 196 | 752145 | 752408 | + | NZ_CP060723.1 | Pedobacter roseus |
| 197 | 939007 | 939252 | + | NC_000117.1 | Chlamydia trachomatis D/UW-3/CX |
| 198 | 2670406 | 2670630 | - | NC_015177.1 | Pseudopedobacter saltans DSM 12145 |
| 199 | 884777 | 885025 | - | NC_022439.1 | Chlamydia pecorum PV3056/3 |
| 200 | 872831 | 873070 | - | NZ_LR134529.1 | Bartonella vinsonii |
| 201 | 3599805 | 3600050 | + | NC_009719.1 | Parvibaculum lavamentivorans DS-1 |
| 202 | 3628532 | 3628789 | + | NZ_AP022573.1 | Mycobacterium saskatchewanense |
| 203 | 1009328 | 1009546 | - | NZ_CP038017.1 | Allofrancisella frigidaquae |
| 204 | 1085286 | 1085504 | - | NZ_CP038241.1 | Allofrancisella inopinata |
| 205 | 631294 | 631557 | + | NZ_LR590484.1 | Sphingobacterium thalpophilum |
| 206 | 4256879 | 4257133 | + | NZ_AP022614.1 | Mycobacterium parmense |
| 207 | 2114194 | 2114448 | - | NZ_AP022615.1 | Mycobacterium heidelbergense |
| 208 | 206326 | 206574 | - | NZ_CP015840.1 | Chlamydia gallinacea 08-1274/3 |
| 209 | 1303265 | 1303492 | + | NZ_CP054020.1 | Thiomicrorhabdus xiamenensis |
| 210 | 6027063 | 6027305 | - | NZ_CP032382.1 | Chryseolinea soli |
| 211 | 218357 | 218602 | + | NC_002620.2 | Chlamydia muridarum str. Nigg |
| 212 | 998423 | 998668 | + | NZ_LS398098.1 | Chlamydia suis |
| 213 | 3310778 | 3311032 | + | NC_022663.1 | Mycobacterium kansasii ATCC 12478 |
| 214 | 5670718 | 5670948 | + | NZ_CP048222.1 | Rhodocytophaga rosea |
| 215 | 2203826 | 2204077 | + | NZ_CP014263.1 | Spirosoma montaniterrae |
| 216 | 4665192 | 4665416 | + | NZ_CP042437.1 | Mucilaginibacter ginsenosidivorax |
| 217 | 3465734 | 3465958 | + | NZ_CP071878.1 | Mucilaginibacter gossypii |
| 218 | 4217354 | 4217605 | + | NZ_CP020104.1 | Spirosoma aerolatum |
| 219 | 2149045 | 2149272 | + | NZ_CP048788.1 | Roseobacter ponti |
| 220 | 1471408 | 1471659 | - | NZ_CP053435.1 | Spirosoma taeanense |
| 221 | 3143432 | 3143683 | - | NZ_CP020105.1 | Spirosoma rigui |
| 222 | 1729395 | 1729640 | - | NZ_CP050063.1 | Spirosoma aureum |
| 223 | 4370361 | 4370606 | + | NZ_CP010429.1 | Spirosoma radiotolerans |
| 224 | 4858505 | 4858756 | + | NZ_CP025096.1 | Spirosoma pollinicola |
| 225 | 4768146 | 4768385 | - | NZ_CP045929.1 | Saccharopolyspora coralli |
| 226 | 2565804 | 2566028 | - | NZ_CP019437.1 | Thioclava nitratireducens |
| 227 | 2478418 | 2478642 | - | NZ_CP053562.1 | Thioclava electrotropha |
| 228 | 1488687 | 1488911 | - | NZ_CP016545.1 | Paraurantiacibacter namhicola |
| 229 | 5412886 | 5413146 | - | NZ_LR134355.1 | Mycolicibacterium chitae |
| 230 | 8156985 | 8157224 | - | NC_009142.1 | Saccharopolyspora erythraea NRRL 2338 |
| 231 | 66547 | 66771 | + | NC_014414.1 | Parvularcula bermudensis HTCC2503 |
| 232 | 1783891 | 1784118 | + | NZ_CP021404.1 | Pacificitalea manganoxidans |
| 233 | 1213557 | 1213811 | + | NC_012440.1 | Persephonella marina EX-H1 |
| 234 | 3606407 | 3606634 | - | NZ_CP015093.1 | Salipiger abyssi |
| 235 | 124614 | 124841 | + | NZ_CP007520.1 | Mycoplasma yeatsii GM274B |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_011661.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01250.19 | 0.95 | 223 | 528 | same-strand | Ribosomal protein S6 |
| 2 | PF03948.16 | 0.79 | 185 | 33 | same-strand | Ribosomal protein L9, C-terminal domain |
| 3 | PF01281.21 | 0.79 | 185 | 33 | same-strand | Ribosomal protein L9, N-terminal domain |
++ More..