ProsmORF-pred
Result : Q5WZJ4
Protein Information
Information Type Description
Protein name 50S ribosomal protein L30
NCBI Accession ID CR628337.1
Organism Legionella pneumophila (strain Lens)
Left 440331
Right 440516
Strand +
Nucleotide Sequence ATGGGAAAAAAAATTAAAATAACCTTGGTTAAAAGCACGATAGGTAGAAAACCAAAACATGTTGCTATAGCCAAACAGCTGGGTTTAGGTAAAACAAATTCAAGTGTGGTTCATAGTGATACTCCTGCAATTCGTGGACTTGTAAATGAAATTAATTACCTGTTGTTGGTTGAGGAGAGTGCATAA
Sequence MGKKIKITLVKSTIGRKPKHVAIAKQLGLGKTNSSVVHSDTPAIRGLVNEINYLLLVEESA
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl00203. Profile Description: N/A. This family includes prokaryotic L30 and eukaryotic L7.
Pubmed ID 15467720
Domain CDD:412218
Functional Category Ribosomal_protein
Uniprot ID Q5WZJ4
ORF Length (Amino Acid) 61
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 449
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 391374 391559 + NZ_CP013742.1 Legionella pneumophila
2 3080005 3080190 - NZ_LN614827.1 Legionella fallonii LLAP-10
3 8460 8645 + NZ_CP025491.2 Legionella sainthelensi
4 571692 571877 + NC_013861.1 Legionella longbeachae NSW150
5 453803 453991 + NZ_LN614830.1 Tatlockia micdadei
6 659886 660071 + NZ_LT906442.1 Legionella waltersii
7 2645248 2645436 + NZ_LR134374.1 Legionella spiritensis
8 2962250 2962435 - NZ_CP016397.1 Legionella clemsonensis
9 263293 263478 + NZ_LT906451.1 Legionella lansingensis
10 344917 345102 + NZ_LN681225.1 Legionella hackeliae
11 2874366 2874554 - NZ_CP038254.1 Legionella israelensis
12 1749 1937 - NZ_LR134417.1 Legionella adelaidensis
13 3343287 3343466 - NZ_CP040924.1 Clostridium thermarum
14 2653760 2653939 - NZ_HG917868.1 Clostridium bornimense
15 253657 253836 + NZ_CP027286.1 Clostridium chauvoei
16 2018314 2018493 + NZ_CP023671.1 Clostridium septicum
17 545718 545903 + NZ_CP031518.1 Treponema ruminis
18 244177 244341 + NC_008593.1 Clostridium novyi NT
19 656561 656740 + NZ_CP014176.1 Clostridium argentinense
20 453638 453817 - NZ_CP022355.1 Paraphotobacterium marinum
21 1122276 1122428 - NZ_CP048429.1 Paenibacillus jilunlii
22 6428947 6429099 - NZ_CP009287.1 Paenibacillus graminis
23 1144602 1144754 - NZ_CP068595.1 Paenibacillus sonchi
24 7129869 7130021 - NZ_LN831776.1 Paenibacillus riograndensis SBR5
25 7393804 7393956 - NZ_CP009285.1 Paenibacillus borealis
26 584037 584222 + NZ_CP068345.1 Succinivibrio dextrinosolvens
27 1086916 1087077 + NZ_CP041335.1 Chitinolyticbacter meiyuanensis
28 2065163 2065345 - NC_007503.1 Carboxydothermus hydrogenoformans Z-2901
29 3729197 3729367 + NZ_CP035492.1 Paenibacillus protaetiae
30 340756 340938 + NZ_LN879430.1 Herbinix luporum
31 580812 580967 + NZ_CP014223.1 Anaerotignum propionicum DSM 1682
32 114364 114525 + NZ_LS483343.1 Streptococcus ferus
33 6059558 6059734 + NZ_AP019308.1 Paenibacillus baekrokdamisoli
34 2909317 2909475 - NC_017857.3 Methylophaga nitratireducenticrescens
35 4493631 4493810 - NC_014393.1 Clostridium cellulovorans 743B
36 971541 971720 - NZ_CP071376.1 Clostridium gasigenes
37 320943 321122 + NZ_CP023567.1 Erwinia pyrifoliae
38 84909 85067 + NZ_LR134512.1 Streptococcus agalactiae
39 352576 352764 - NZ_LS974202.1 Mesotoga infera
40 677324 677485 + NZ_CP043405.1 Streptococcus ratti
41 2327527 2327688 + NZ_CP041660.1 Catenovulum sediminis
42 2408628 2408795 + NC_017856.1 Methylophaga frappieri
43 2741311 2741493 + NZ_LR130778.1 Petrocella atlantisensis
44 585001 585159 + NZ_AP021888.1 Thiosulfativibrio zosterae
45 2217023 2217178 + NZ_CP058952.1 Chitinibacter fontanus
46 241748 241903 + NZ_CP017253.2 Clostridium taeniosporum
47 3477722 3477901 - NC_013961.1 Erwinia amylovora CFBP1430
48 3524361 3524540 - NC_010694.1 Erwinia tasmaniensis Et1/99
49 4582637 4582816 - NC_014306.1 Erwinia billingiae Eb661
50 81670 81831 + NC_012924.1 Streptococcus suis SC84
51 377273 377452 + NZ_LS483470.1 Leminorella richardii
52 94671 94850 + NZ_CP018804.1 Histophilus somni
53 63852 64013 + NZ_LR594050.1 Streptococcus porcinus
54 5281008 5281187 - NZ_CP020953.1 Clostridium drakei
55 4643014 4643193 + NZ_CP009933.1 Clostridium scatologenes
56 2966411 2966584 - NC_008261.1 Clostridium perfringens ATCC 13124
57 2614248 2614436 + NZ_CP011388.1 Paenibacillus swuensis
58 1575162 1575347 - NZ_CP021060.1 Taylorella equigenitalis
59 4430638 4430817 - NZ_CP011803.1 Clostridium carboxidivorans P7
60 1165111 1165272 - NZ_LR134341.1 Streptococcus pseudoporcinus
61 140281 140469 + NC_015581.1 Thiomicrospira cyclica ALM1
62 279765 279944 + NZ_FO704550.1 Xenorhabdus doucetiae
63 80057 80218 + NZ_CP039457.1 Streptococcus pasteurianus
64 1835135 1835296 - NC_017581.1 Streptococcus thermophilus JIM 8232
65 1544015 1544200 - NC_016043.1 Taylorella asinigenitalis MCE3
66 640640 640819 + NZ_CP009761.1 Parvimonas micra
67 175784 175972 + NZ_CP007030.1 Thiomicrospira aerophila AL3
68 1853312 1853473 - NZ_LR134275.1 Streptococcus vestibularis
69 3482446 3482625 - NZ_FO704551.1 Xenorhabdus poinarii G6
70 4058544 4058723 - NC_013892.1 Xenorhabdus bovienii SS-2004
71 3161782 3161961 - NZ_CP060401.1 Xenorhabdus nematophila
72 4098451 4098630 - NZ_LS483422.1 Providencia heimbachae
73 4188415 4188594 - NZ_CP072455.1 Xenorhabdus budapestensis
74 3157313 3157492 - NZ_CP016176.1 Xenorhabdus hominickii
75 878650 878811 + NZ_CP054015.1 Streptococcus gallolyticus
76 2419603 2419761 - NZ_LR590481.1 Hathewaya histolytica
77 403810 403995 - NZ_CP028102.1 Fusobacterium mortiferum ATCC 9817
78 1136145 1136306 + NZ_CP028103.1 Fusobacterium varium ATCC 27725
79 1461180 1461341 + NZ_CP028105.1 Fusobacterium ulcerans
80 383814 383999 - NZ_AP022345.1 Fluviibacter phosphoraccumulans
81 90340 90501 + NZ_CP031733.1 Streptococcus chenjunshii
82 1538173 1538358 - NZ_CP047165.1 Pelistega ratti
83 1681214 1681399 + NZ_CP024699.1 Fusobacterium pseudoperiodonticum
84 4552878 4553036 - NZ_CP015756.1 Clostridium estertheticum subsp. estertheticum
85 312512 312691 + NC_015589.1 Desulfotomaculum ruminis DSM 2154
86 730411 730599 + NZ_CP011494.1 Marinobacter psychrophilus
87 5695114 5695266 - NZ_CP034346.1 Paenibacillus lutimineralis
88 1827977 1828138 - NZ_LT906439.1 Streptococcus merionis
89 155333 155518 + NZ_CP024955.1 Kyrpidia spormannii
90 161923 162108 + NC_014098.1 Kyrpidia tusciae DSM 2912
91 161133 161312 + NZ_CP007445.1 Gilliamella apicola
92 1824993 1825151 - NZ_CP032627.1 Lactococcus allomyrinae
93 6309284 6309436 - NZ_CP048209.1 Paenibacillus lycopersici
94 78857 79018 + NZ_LR594046.1 Streptococcus dysgalactiae
95 274908 275066 + NZ_CP032416.1 Clostridium fermenticellae
96 1259853 1260035 + NZ_CP064781.1 Azospira restricta
97 754643 754831 + NZ_CP021425.1 Oleiphilus messinensis
98 82904 83065 + NZ_AP018400.1 Streptococcus ruminantium
99 4092862 4093041 - NZ_CP048796.1 Providencia vermicola
100 978104 978283 + NZ_CP029736.1 Providencia rettgeri
101 3560629 3560808 - NZ_CP031123.2 Providencia huaxiensis
102 4838048 4838200 - NZ_CP045293.1 Paenibacillus guangzhouensis
103 2692213 2692398 - NC_015500.1 Treponema brennaborense DSM 12168
104 2795224 2795373 + NZ_CP011058.1 Paenibacillus beijingensis
105 3785533 3785721 - NZ_CP020931.1 Marinobacter salarius
106 177724 177903 + NZ_CP009056.1 Frischella perrara
107 904289 904477 + NC_007614.1 Nitrosospira multiformis ATCC 25196
108 6150639 6150815 - NZ_CP009428.1 Paenibacillus odorifer
109 221509 221685 - NZ_CP034437.1 Paenibacillus albus
110 2559355 2559537 - NZ_CP010554.1 Rugosibacter aromaticivorans
111 852042 852203 + NZ_CP015196.1 Streptococcus marmotae
112 3852710 3852895 - NC_015275.1 Cellulosilyticum lentocellum DSM 5427
113 32989 33150 - NZ_CP070872.1 Lactococcus taiwanensis
114 443906 444070 + NZ_CP054020.1 Thiomicrorhabdus xiamenensis
115 3928822 3929001 - NZ_CP013019.1 Clostridium pasteurianum
116 5013225 5013377 - NZ_CP009286.1 Paenibacillus stellifer
117 3606461 3606640 - NZ_CP034148.1 Pantoea agglomerans
118 464954 465133 + NZ_CP045720.1 Pantoea eucalypti
119 475060 475239 + NZ_CP038853.1 Pantoea vagans
120 2442153 2442332 - NZ_CP049115.1 Pantoea stewartii
121 259283 259459 + NZ_CP009354.1 Vibrio tubiashii ATCC 19109
122 317521 317700 + NC_017910.1 Shimwellia blattae DSM 4481 = NBRC 105725
123 1181470 1181649 - NZ_CP019706.1 Pantoea alhagi
124 2122346 2122525 + NZ_CP042941.1 Atlantibacter hermannii
125 459062 459241 + NC_012880.1 Musicola paradisiaca Ech703
126 4420012 4420191 - NZ_CP031560.1 Dickeya dianthicola
127 1639835 1640014 - NZ_CP015137.1 Dickeya solani IPO 2222
128 259841 260020 + NZ_CP016786.1 Clostridium isatidis
129 108533 108688 - NZ_HG916765.1 Castellaniella defragrans 65Phen
130 1197969 1198148 + NZ_CP023536.1 Providencia alcalifaciens
131 4802651 4802830 - NZ_LT906479.1 Serratia ficaria
132 4226396 4226572 + NZ_CP048286.1 Paenibacillus rhizovicinus
133 240417 240596 + NC_009253.1 Desulfotomaculum reducens MI-1
134 370429 370587 + NZ_CP040602.1 Thiomicrorhabdus sediminis
135 2216852 2217010 - NC_022369.1 Lactococcus lactis subsp. cremoris KW2
136 70939 71100 + NZ_LS483403.1 Streptococcus lutetiensis
137 2393500 2393685 - NZ_AP021889.1 Thiosulfatimonas sediminis
138 1972433 1972612 - NZ_CP013114.1 Staphylococcus equorum
139 2605546 2605728 - NC_015385.1 Treponema succinifaciens DSM 2489
140 2069985 2070164 - NZ_CP012395.1 Clostridium autoethanogenum DSM 10061
141 4437215 4437394 - NC_014328.1 Clostridium ljungdahlii DSM 13528
142 2269478 2269630 + NC_006513.1 Aromatoleum aromaticum EbN1
143 73291 73452 + NZ_CP010450.1 Streptococcus pyogenes
144 2360532 2360717 + NZ_CP035807.1 Thiospirochaeta perfilievii
145 323222 323401 + NZ_CP065534.1 Lonsdalea populi
146 742974 743153 - NZ_CP023009.1 Lonsdalea britannica
147 409518 409697 + NZ_CP061511.1 Mixta calida
148 481113 481292 + NZ_CP042220.2 Dickeya poaceiphila
149 4039416 4039595 - NZ_LT615367.1 Dickeya aquatica
150 484136 484315 + NZ_CP026377.1 Mixta gaviniae
151 399884 400063 + NZ_AP023184.1 Buttiauxella agrestis
152 396214 396393 + NZ_CP054058.1 Scandinavium goeteborgense
153 4251178 4251357 - NZ_CP050150.1 Hafnia alvei
154 4233100 4233279 + NZ_CP028271.1 Mixta intestinalis
155 4183222 4183401 - NZ_CP025799.1 Dickeya zeae
156 244818 244997 + NZ_LR134201.1 Cedecea lapagei
157 384381 384560 + NC_012912.1 Dickeya chrysanthemi Ech1591
158 493264 493443 + NZ_CP034036.1 Brenneria nigrifluens DSM 30175 = ATCC 13028
159 4383129 4383308 - NC_014500.1 Dickeya dadantii 3937
160 3322812 3322991 + NZ_CP009460.1 Dickeya fangzhongdai
161 240296 240475 + NZ_CP023525.1 Cedecea neteri
162 4805041 4805220 + NZ_CP014137.1 Brenneria goodwinii
163 4135309 4135488 + NZ_CP044399.1 Moritella marina ATCC 15381
164 2174896 2175054 + NZ_CP014699.1 Streptococcus pantholopis
165 189046 189234 + NZ_CP029797.1 Paraliobacillus zengyii
166 392034 392219 + NZ_CP045571.1 Acidithiobacillus thiooxidans ATCC 19377
167 2258615 2258794 - NZ_LT906477.1 Clostridium cochlearium
168 2541756 2541932 - NZ_CP033078.1 Vibrio zhugei
169 521650 521835 + NZ_CP068114.1 Fusobacterium canifelinum
170 573283 573468 + NZ_CP013336.1 Fusobacterium hwasookii ChDC F206
171 433966 434151 + NZ_LN831027.1 Fusobacterium nucleatum subsp. polymorphum
172 4157475 4157663 - NC_017964.1 Advenella kashmirensis WT001
173 4503020 4503208 - NZ_CP003915.1 Advenella mimigardefordensis DPN7
174 498159 498320 + NZ_CP022680.1 Streptococcus respiraculi
175 120955 121131 - NC_013456.1 Vibrio antiquarius
176 1141300 1141482 + NZ_CP016757.1 Cloacibacillus porcorum
177 408612 408788 + NZ_CP046268.1 Vibrio spartinae
178 2903814 2903975 - NZ_CP028339.1 Thauera aromatica K172
179 1900262 1900423 + NZ_CP018839.1 Thauera chlorobenzoica
180 6336798 6336989 - NC_007645.1 Hahella chejuensis KCTC 2396
181 2529554 2529733 + NZ_CP011078.1 Yersinia ruckeri
182 1201845 1202027 + NZ_CP017703.1 Aeribacillus pallidus
183 4933100 4933279 - NZ_LR134494.1 Serratia quinivorans
184 287274 287453 + NZ_CP014204.2 Clostridium baratii
185 78377 78538 + NZ_CP065061.1 Streptococcus equi subsp. zooepidemicus
186 115504 115665 + NZ_CP025536.1 Streptococcus pluranimalium
187 499783 499944 - NZ_LR134293.1 Streptococcus canis
188 351366 351542 + NZ_CP047475.1 Vibrio astriarenae
189 643265 643417 + NZ_CP025682.1 Azoarcus pumilus
190 1479882 1480043 - NZ_CP014835.1 Streptococcus halotolerans
191 2586326 2586505 - NZ_CP009787.1 Yersinia rohdei
192 3011464 3011643 + NZ_CP009781.1 Yersinia aldovae 670-83
193 1572057 1572236 + NZ_CP054043.1 Yersinia mollaretii ATCC 43969
194 315790 315969 + NZ_LR134373.1 Yersinia pseudotuberculosis
195 4360559 4360738 - NZ_CP043727.1 Yersinia canariae
196 340408 340587 + NZ_CP011118.1 Yersinia enterocolitica
197 4374649 4374828 - NZ_CP032487.1 Yersinia hibernica
198 1260267 1260446 - NZ_CP007230.1 Yersinia similis
199 144837 145016 + NZ_CP046293.1 Yersinia intermedia
200 4395140 4395292 + NZ_CP045295.1 Paenibacillus cellulositrophicus
201 2712890 2713066 - NZ_AP019651.1 Vibrio taketomensis
202 2873024 2873182 - NZ_CP014170.1 Clostridium tyrobutyricum
203 3100348 3100524 + NZ_CP014035.2 Vibrio fluvialis
204 2698216 2698392 - NZ_CP016414.1 Vibrio scophthalmi
205 3188309 3188485 + NZ_AP019657.1 Vibrio ponticus
206 117310 117486 - NZ_CP040990.1 Vibrio furnissii
207 2251723 2251902 + NZ_AP018449.1 Methylomusa anaerophila
208 2849354 2849530 - NZ_CP032093.1 Vibrio alfacsensis
209 2615975 2616151 - NZ_CP009977.1 Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
210 284313 284489 + NZ_CP030788.1 Vibrio campbellii
211 2992097 2992273 - NZ_CP031781.1 Vibrio parahaemolyticus
212 2818486 2818662 - NZ_CP018312.1 Vibrio rotiferianus
213 1539795 1539971 - NZ_CP019959.1 Vibrio owensii
214 1952275 1952451 - NZ_CP025792.1 Vibrio jasicida 090810c
215 94504 94665 + NZ_LS483383.1 Streptococcus cristatus ATCC 51100
216 112084 112263 + NZ_CP015581.1 Tatumella citrea
217 321476 321634 + NC_013216.1 Desulfofarcimen acetoxidans DSM 771
218 428151 428330 + NZ_LN907827.1 Erwinia gerundensis
219 931782 931937 - NZ_CP012371.1 Nitrosospira briensis C-128
220 413013 413189 + NZ_CP044069.1 Vibrio vulnificus
221 156934 157113 + NZ_CP034035.1 Brenneria rubrifaciens
222 2274087 2274263 - NZ_CP035688.1 Vibrio metoecus
223 2175483 2175659 + NZ_CP046793.1 Vibrio metschnikovii
224 2616333 2616509 - NZ_AP014524.1 Vibrio cholerae MS6
225 394523 394702 + NZ_CP019698.1 Desulfotomaculum ferrireducens
226 492014 492190 + NZ_CP009467.1 Vibrio harveyi
227 444137 444298 - NZ_CP032620.1 Streptococcus koreensis
228 462176 462340 + NZ_CP033040.1 Thiomicrorhabdus indica
229 1755639 1755800 - NZ_LS483436.1 Streptococcus intermedius
230 2029754 2029915 - NZ_LR594049.1 Streptococcus gordonii
231 430360 430542 + NZ_AP018721.1 Sulfuritortus calidifontis
232 453741 453899 + NZ_CP035033.1 Hydrogenovibrio thermophilus
233 1392481 1392636 + NZ_CP021106.3 Nitrosospira lacus
234 456592 456768 + NZ_LR215048.1 Acholeplasma axanthum
235 2502184 2502369 - NZ_CP036150.1 Oceanispirochaeta crateris
236 3084317 3084502 - NZ_CP028901.1 Algicoccus marinus
237 4334477 4334653 - NC_008709.1 Psychromonas ingrahamii 37
238 1621222 1621404 + NZ_CP048000.1 Anaerocolumna sedimenticola
239 142769 142954 - NZ_CP019323.1 Companilactobacillus allii
240 5290675 5290827 - NZ_CP009288.1 Paenibacillus durus
241 1125678 1125851 + NC_014960.1 Anaerolinea thermophila UNI-1
242 690264 690446 + NZ_AP012547.1 Sulfuritalea hydrogenivorans sk43H
243 465561 465740 + NZ_CP045845.1 Kluyvera intermedia
244 391395 391547 + NZ_CP028106.1 Fusobacterium gonidiaformans ATCC 25563
245 232693 232845 - NZ_CP028107.1 Fusobacterium necrophorum subsp. funduliforme
246 761651 761809 + NC_014387.1 Butyrivibrio proteoclasticus B316
247 3990898 3991050 + NZ_CP016809.1 Paenibacillus ihbetae
248 1777259 1777438 - NZ_CP013911.1 Staphylococcus haemolyticus
249 387203 387361 + NZ_AP020335.1 Hydrogenovibrio marinus
250 2847573 2847749 - NZ_CP045350.1 Vibrio aquimaris
251 1876758 1876946 + NZ_CP011232.1 Kosmotoga pacifica
252 1515096 1515275 + NZ_CP033732.1 Staphylococcus hominis
253 716328 716507 + NZ_LR134242.1 Staphylococcus warneri
254 754667 754846 - NC_022737.1 Staphylococcus pasteuri SP1
255 2163785 2163964 - NZ_LT906460.1 Staphylococcus simiae
256 2265257 2265436 - NZ_LR134304.1 Staphylococcus schweitzeri
257 2935636 2935812 - NZ_LT960611.1 Vibrio tapetis subsp. tapetis
258 1908050 1908211 - NZ_AP014612.1 Streptococcus troglodytae
259 259527 259712 + NZ_CP016796.1 Francisella uliginis
260 1707829 1708017 - NZ_CP049366.1 Companilactobacillus pabuli
261 2091650 2091838 - NZ_CP017702.1 Companilactobacillus farciminis KCTC 3681 = DSM 20184
262 2017236 2017424 - NZ_CP040736.1 Companilactobacillus futsaii
263 2454252 2454413 - NZ_CP014646.1 Thauera humireducens
264 1757731 1757892 + NZ_CP013237.1 Streptococcus mutans
265 241465 241641 + NZ_CP006954.1 Bibersteinia trehalosi USDA-ARS-USMARC-188
266 222176 222334 + NC_011837.1 Clostridium kluyveri NBRC 12016
267 852800 852958 - NZ_CP023392.1 Lactococcus raffinolactis
268 3262890 3263063 - NC_015687.1 Clostridium acetobutylicum DSM 1731
269 124555 124716 - NZ_CP069450.1 Butyricimonas virosa
270 1051780 1051965 - NZ_AP018795.1 Acidithiobacillus ferridurans
271 412266 412448 + NZ_AP023367.1 Anaerocolumna cellulosilytica
272 2240329 2240508 + NZ_CP014022.1 Staphylococcus lugdunensis
273 2954817 2955005 - NZ_CP045875.1 Heliorestis convoluta
274 763037 763219 + NZ_CP035288.1 Staphylococcus epidermidis
275 644026 644211 - NZ_CP048877.1 Thermosulfuriphilus ammonigenes
276 202123 202302 - NZ_CP066042.1 Staphylococcus saccharolyticus
277 1431078 1431257 - NZ_CP007601.1 Staphylococcus capitis subsp. capitis
278 776672 776851 + NZ_CP064056.1 Staphylococcus lloydii
279 794190 794369 + NZ_AP018587.1 Staphylococcus caprae
280 3820690 3820872 - NZ_CP016210.1 Azoarcus olearius
281 2622622 2622813 - NZ_CP017415.1 Acidihalobacter yilgarnenesis
282 730042 730221 + NZ_LR134089.1 Staphylococcus saprophyticus
283 796735 796914 + NZ_CP008724.1 Staphylococcus xylosus
284 236019 236207 - NC_018178.1 Melioribacter roseus P3M-2
285 129618 129803 + NZ_CP031513.1 Bombilactobacillus bombi
286 446191 446373 + NC_018017.1 Desulfitobacterium dehalogenans ATCC 51507
287 477830 478012 + NC_011830.1 Desulfitobacterium hafniense DCB-2
288 300802 300987 + NC_011761.1 Acidithiobacillus ferrooxidans ATCC 23270
289 946186 946350 + NC_023035.1 Salinispira pacifica
290 199265 199444 + NZ_CP043998.1 Clostridium diolis
291 384569 384724 + NC_014207.1 Methylotenera versatilis 301
292 601647 601817 + NC_007969.1 Psychrobacter cryohalolentis K5
293 3500336 3500497 + NZ_CP032819.1 Butyricimonas faecalis
294 1854591 1854761 - NZ_CP041730.1 Chitinimonas arctica
295 318917 319102 + NC_019897.1 Thermobacillus composti KWC4
296 2575324 2575506 + NZ_CP070062.1 Coprococcus comes
297 2309398 2309577 - NC_007795.1 Staphylococcus aureus subsp. aureus NCTC 8325
298 551255 551440 + NZ_CP014324.1 Oenococcus oeni
299 332734 332916 + NZ_AP018786.1 Sutterella megalosphaeroides
300 146225 146386 - NZ_CP065637.1 Lactococcus garvieae
301 1906333 1906488 - NZ_CP031253.1 Neisseria lactamica
302 2694997 2695176 + NZ_CP018199.1 Staphylococcus succinus
303 1747377 1747538 - NZ_LR134336.1 Streptococcus oralis ATCC 35037
304 2957 3118 + NZ_CP032621.1 Streptococcus gwangjuense
305 173515 173694 + NZ_AP019827.1 Leptotrichia shahii
306 300122 300283 + NC_015875.1 Streptococcus pseudopneumoniae IS7493
307 133927 134106 + NZ_AP019846.1 Leptotrichia hongkongensis
308 2126117 2126296 - NZ_AP019829.2 Leptotrichia wadei
309 252185 252364 + NC_013192.1 Leptotrichia buccalis C-1013-b
310 2517256 2517435 - NZ_AP019845.1 Leptotrichia trevisanii
311 1244016 1244201 + NC_011653.1 Thermosipho africanus TCF52B
312 485928 486089 - NZ_CP016953.1 Streptococcus himalayensis
313 383938 384135 + NC_012968.1 Methylotenera mobilis JLW8
314 1001181 1001366 - NZ_CP012034.1 Companilactobacillus ginsenosidimutans
315 2676842 2677027 - NC_015942.1 Acidithiobacillus ferrivorans SS3
316 2456460 2456612 + NZ_CP059467.1 Aromatoleum bremense
317 155878 156063 + NZ_CP021781.1 Francisella adeliensis
318 588787 588942 + NC_008344.1 Nitrosomonas eutropha C91
319 1276166 1276348 - NZ_CP037940.1 Weissella cryptocerci
320 1445578 1445757 - NC_022538.1 Acholeplasma palmae J233
321 202222 202401 + NC_020291.1 Clostridium saccharoperbutylacetonicum N1-4(HMT)
322 237725 237910 + NZ_CP022375.1 Francisella opportunistica
323 239890 240075 + NC_017449.1 Francisella hispaniensis
324 1610282 1610464 - NZ_CP027002.1 [Ruminococcus] gnavus ATCC 29149
325 2080206 2080388 - NZ_CP059560.1 Aromatoleum petrolei
326 430326 430511 + NZ_CP022132.1 Francisella halioticida
327 617658 617837 + NZ_CP065712.1 Staphylococcus auricularis
328 1436325 1436510 - NZ_CP024610.1 Lactobacillus terrae
329 1178414 1178566 + NZ_CP022121.1 Dehalobacterium formicoaceticum
330 1710606 1710767 - NZ_CP034543.1 Streptococcus periodonticum
331 1774964 1775125 - NZ_CP012805.1 Streptococcus anginosus
332 2350997 2351152 + NZ_CP019448.1 Simonsiella muelleri ATCC 29453
333 1412233 1412394 + NC_010337.2 Heliomicrobium modesticaldum Ice1
334 296425 296580 + NC_007947.1 Methylobacillus flagellatus KT
335 4068289 4068468 - NZ_CP021850.1 Pseudoclostridium thermosuccinogenes
336 1469821 1469982 - NZ_CP022684.1 Ketobacter alkanivorans
337 1052258 1052437 - NZ_CP022096.2 Staphylococcus pettenkoferi
338 1921425 1921604 - NC_014632.1 Ilyobacter polytropus DSM 2926
339 2943498 2943674 + NZ_CP045798.1 Thermoanaerosceptrum fracticalcis
340 115255 115434 + NZ_CP019573.1 Abyssicoccus albus
341 367640 367804 + NZ_AP018722.1 Thiomicrorhabdus aquaedulcis
342 572706 572861 + NZ_AP021881.1 Sulfuriferula nivalis
343 1973321 1973500 - NC_014925.1 Staphylococcus pseudintermedius HKU10-03
344 2103837 2103998 + NZ_CP014912.1 Secundilactobacillus paracollinoides
345 185636 185821 + NZ_CP061835.1 Weissella viridescens
346 1418379 1418561 - NZ_CP011403.1 Ligilactobacillus salivarius str. Ren
347 2188008 2188187 - NZ_AP019822.1 Pseudoleptotrichia goodfellowii
348 274990 275169 + NZ_CP011366.1 Salinicoccus halodurans
349 458127 458312 + NZ_CP017996.1 Companilactobacillus crustorum
350 3752288 3752467 - NZ_CP008849.1 Alteromonas australica
351 3080947 3081129 - NZ_CP022579.1 Oryzomicrobium terrae
352 3529796 3529975 - NZ_CP030775.1 Clostridium butyricum
353 314729 314914 + NZ_CP027563.1 Weissella confusa
354 1286618 1286797 + NZ_CP027770.1 Staphylococcus felis
355 40541 40726 + NZ_CP023501.1 Weissella paramesenteroides
356 3433869 3434048 + NZ_LT635479.1 Lachnoclostridium phocaeense
357 1933561 1933716 - NZ_CP068564.1 Keratinibaculum paraultunense
358 4084554 4084739 + NZ_CP043473.1 Chromobacterium paludis
359 2217199 2217384 + NZ_CP029495.1 Chromobacterium phragmitis
360 470048 470230 + NC_019903.1 Desulfitobacterium dichloroeliminans LMG P-21439
361 4506662 4506847 - NC_005085.1 Chromobacterium violaceum ATCC 12472
362 3573888 3574073 + NZ_CP017707.1 Chromobacterium vaccinii
363 435354 435539 + NZ_AP019312.1 Chromobacterium haemolyticum
364 578538 578693 + NZ_CP059564.1 Alysiella filiformis
365 1959446 1959619 - NZ_CP065993.1 Leuconostoc pseudomesenteroides
366 1256344 1256523 + NZ_CP012836.1 Algoriphagus sanaruensis
367 1183308 1183490 - NZ_CP012505.1 Francisella persica ATCC VR-331
368 1561304 1561486 - NZ_CP047141.1 Ligilactobacillus animalis
369 1786452 1786607 - NZ_CP039887.1 Neisseria subflava
370 1960534 1960689 + NZ_CP039886.1 Neisseria flavescens
371 1270848 1271003 + NZ_CP046027.1 Neisseria brasiliensis
372 2814396 2814566 - NC_020134.1 Thermoclostridium stercorarium subsp. stercorarium DSM 8532
373 881675 881830 - NZ_CP012678.1 Psychrobacter urativorans
374 644800 644979 - NZ_CP020773.1 Staphylococcus lutrae
375 392334 392513 - NZ_CP049886.1 Vagococcus coleopterorum
376 487897 488082 + NC_007963.1 Chromohalobacter salexigens DSM 3043
377 139335 139520 - NZ_CP009654.1 Francisella frigiditurris
378 284690 284875 - NZ_CP059563.1 Conchiformibius steedae
379 108596 108781 + NZ_CP017326.1 Weissella soli
380 615397 615573 + NC_012560.1 Azotobacter vinelandii DJ
381 1722642 1722797 - NZ_CP021520.1 Neisseria meningitidis
382 36006 36155 + NZ_AP014568.1 Serpentinomonas raichei
383 2278968 2279144 - NC_015520.1 Mahella australiensis 50-1 BON
384 1579937 1580122 + NZ_CP039731.1 Aquitalea aquatilis
385 3954974 3955159 - NZ_CP047241.1 Aquitalea denitrificans
386 1804813 1804998 - NZ_CP014332.1 Weissella jogaejeotgali
387 3814113 3814292 - NZ_CP031769.1 Salinimonas sediminis
388 712614 712793 + NZ_CP008747.1 Staphylococcus hyicus
389 1722090 1722269 - NZ_LT906464.1 Staphylococcus muscae
390 840249 840437 + NZ_LR134365.1 Cardiobacterium hominis
391 452294 452479 + NZ_CP012559.1 Companilactobacillus heilongjiangensis
392 3582100 3582279 - NZ_CP036536.1 Salinimonas lutimaris
393 3925508 3925687 - NZ_CP046670.1 Alteromonas mediterranea
394 1795586 1795759 + NZ_CP021434.1 Tumebacillus avium
395 3669844 3670023 - NZ_CP028842.1 Clostridium botulinum
396 3950970 3951149 - NZ_CP011663.1 Clostridium sporogenes
397 43940 44089 + NZ_AP014569.1 Serpentinomonas mccroryi
398 4362283 4362456 - NZ_CP022657.1 Tumebacillus algifaecis
399 1369216 1369371 + NZ_LR134533.1 Neisseria weaveri
400 4496890 4497072 - NC_010001.1 Lachnoclostridium phytofermentans ISDg
401 1952647 1952799 - NZ_CP072524.1 Neisseria sicca
402 1699379 1699534 + NZ_LS483369.1 Neisseria cinerea
403 509775 509954 + NZ_CP011367.1 Thioalkalivibrio versutus
404 168687 168860 + NZ_CP015247.1 Leuconostoc suionicum
405 278932 279111 + NC_022549.1 Acholeplasma brassicae
406 2465123 2465299 - NZ_CP011387.1 Deinococcus puniceus
407 1256730 1256912 - NC_016605.1 Pediococcus claussenii ATCC BAA-344
408 746485 746667 + NZ_CP017713.1 Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001
409 2352227 2352385 + NC_016633.1 Sphaerochaeta pleomorpha str. Grapes
410 1520190 1520363 - NZ_CP028251.1 Leuconostoc mesenteroides
411 631974 632159 + NZ_CP044499.1 Lapidilactobacillus dextrinicus
412 3627321 3627500 - NZ_CP033433.1 Cohnella candidum
413 2614762 2614911 - NC_008786.1 Verminephrobacter eiseniae EF01-2
414 932209 932364 - NZ_CP031325.1 Neisseria polysaccharea
415 2179037 2179189 - NZ_CP059569.1 Kingella oralis
416 555200 555382 + NZ_CP030105.1 Lactiplantibacillus plantarum
417 2504092 2504274 - NZ_CP068055.1 Sutterella wadsworthensis
418 1497263 1497445 + NZ_CP020121.1 Comamonas kerstersii
419 1084251 1084448 + NZ_CP018099.1 Caldithrix abyssi DSM 13497
420 1168559 1168741 - NZ_CP062938.1 Bifidobacterium eulemuris
421 1689800 1689982 + NZ_CP062948.1 Bifidobacterium lemurum
422 2117303 2117482 - NZ_CP017267.1 Vagococcus teuberi
423 1161312 1161494 + NZ_CP010028.1 Deinococcus radiopugnans
424 1923328 1923513 - NZ_LR134516.1 Neisseria animaloris
425 1852025 1852198 + NZ_CP042410.1 Leuconostoc citreum
426 1105192 1105347 + NZ_CP031699.1 Neisseria animalis
427 2492715 2492870 - NZ_LT906434.1 Neisseria zoodegmatis
428 77387 77566 + NZ_CP039712.1 Vagococcus zengguangii
429 3069732 3069920 - NC_015152.1 Sphaerochaeta globosa str. Buddy
430 4758891 4759067 - NC_002516.2 Pseudomonas aeruginosa PAO1
431 4168534 4168683 - NZ_CP051298.1 Alicycliphilus denitrificans
432 801259 801420 - NZ_CP042374.1 Leuconostoc carnosum
433 346114 346296 + NZ_CP059276.1 Lactobacillus taiwanensis
434 341410 341592 + NC_008530.1 Lactobacillus gasseri ATCC 33323 = JCM 1131
435 344356 344538 + NZ_AP018549.1 Lactobacillus paragasseri
436 2843258 2843407 - NZ_CP016278.1 Diaphorobacter polyhydroxybutyrativorans
437 770131 770289 + NZ_CP032364.1 Lachnoanaerobaculum umeaense
438 2373890 2374075 - NZ_CP007446.1 Snodgrassella alvi wkB2
439 1059231 1059386 + NZ_CP012028.1 Neisseria gonorrhoeae
440 2102590 2102745 - NZ_CP059567.1 Neisseria shayeganii
441 914918 915073 - NZ_CP022278.1 Neisseria chenwenguii
442 2402478 2402645 - NZ_CP021081.1 Deinococcus ficus
443 2686312 2686467 + NZ_CP060414.1 Neisseria musculi
444 2774235 2774417 - NZ_LT906459.1 Odoribacter splanchnicus
445 329989 330144 + NC_012969.1 Methylovorus glucosetrophus SIP3-4
446 309793 309960 + NZ_CP029494.1 Deinococcus irradiatisoli
447 2318163 2318348 + NZ_CP023777.1 Chitinophaga caeni
448 6020484 6020669 + NC_015510.1 Haliscomenobacter hydrossis DSM 1100
449 1677190 1677375 + NZ_CP031252.1 Neisseria elongata
++ More..
Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_CP013742.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF00253.23 0.86 388 1898.0 same-strand Ribosomal protein S14p/S29e
2 PF00410.21 1.0 448 1482.5 same-strand Ribosomal protein S8
3 PF00347.25 1.0 447 925.5 same-strand Ribosomal protein L6
4 PF00861.24 0.96 430 538.0 same-strand Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
5 PF03719.17 1.0 449 13 same-strand Ribosomal protein S5, C-terminal domain
6 PF00333.22 1.0 449 13 same-strand Ribosomal protein S5, N-terminal domain
7 PF00828.21 0.97 436 7.5 same-strand Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
8 PF00344.22 1.0 448 463.0 same-strand SecY
++ More..