Result : Q5WSE8
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Putative membrane protein insertion efficiency factor |
| NCBI Accession ID | CR628337.1 |
| Organism | Legionella pneumophila (strain Lens) |
| Left | 3344438 |
| Right | 3344683 |
| Strand | - |
| Nucleotide Sequence | ATGGGAAAAATTAACCTCATGCTACGGCAAATAGTTTGCTTACCAATAAAAATGTATCAGTATTTTATTAGCCCTTTGATAACACCATGTTGTCGCTATTATCCGAGTTGTTCAGAGTATGCTGACAGTGCGATCAAACATTATGGCGTAATTAAAGGTTTATTGATGGCACTTAACAGATTGTCTCGTTGCCATCCATGGTCAAAAGGTGGCTATGATCCTTTATTTCCTAACGATAAGAATTGA |
| Sequence | MGKINLMLRQIVCLPIKMYQYFISPLITPCCRYYPSCSEYADSAIKHYGVIKGLLMALNRLSRCHPWSKGGYDPLFPNDKN |
| Source of smORF | Swiss-Prot |
| Function | Could be involved in insertion of integral membrane proteins into the membrane. {ECO:0000255|HAMAP-Rule:MF_00386}. |
| Pubmed ID | 15467720 |
| Domain | CDD:412414 |
| Functional Category | Others |
| Uniprot ID | Q5WSE8 |
| ORF Length (Amino Acid) | 81 |
++ More..
| Conservation Analysis |
No. of Species: 184
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3408344 | 3408589 | - | NZ_CP013742.1 | Legionella pneumophila |
| 2 | 4180054 | 4180302 | - | NZ_LN614827.1 | Legionella fallonii LLAP-10 |
| 3 | 4075904 | 4076152 | - | NC_013861.1 | Legionella longbeachae NSW150 |
| 4 | 3797886 | 3798134 | - | NZ_CP025491.2 | Legionella sainthelensi |
| 5 | 3734406 | 3734654 | - | NZ_LT906442.1 | Legionella waltersii |
| 6 | 147968 | 148216 | - | NZ_CP038254.1 | Legionella israelensis |
| 7 | 2987837 | 2988085 | - | NZ_LT906451.1 | Legionella lansingensis |
| 8 | 9061 | 9309 | + | NZ_CP016397.1 | Legionella clemsonensis |
| 9 | 3437261 | 3437509 | - | NZ_LN681225.1 | Legionella hackeliae |
| 10 | 20736 | 20984 | - | NZ_LR134435.1 | Legionella adelaidensis |
| 11 | 3309174 | 3309422 | - | NZ_LN614830.1 | Tatlockia micdadei |
| 12 | 3948144 | 3948386 | - | NC_019902.2 | Thioalkalivibrio nitratireducens DSM 14787 |
| 13 | 3755939 | 3756181 | - | NZ_CP007029.1 | Thioalkalivibrio paradoxus ARh 1 |
| 14 | 3295879 | 3296115 | + | NC_018012.1 | Thiocystis violascens DSM 198 |
| 15 | 3825498 | 3825707 | - | NZ_AP022853.1 | Sulfurimicrobium lacus |
| 16 | 1182619 | 1182879 | + | NC_017310.1 | Desulfovibrio vulgaris RCH1 |
| 17 | 2739053 | 2739262 | - | NZ_LR590481.1 | Hathewaya histolytica |
| 18 | 3383803 | 3384018 | - | NC_014098.1 | Kyrpidia tusciae DSM 2912 |
| 19 | 3607310 | 3607519 | - | NC_009253.1 | Desulfotomaculum reducens MI-1 |
| 20 | 4758970 | 4759179 | - | NZ_CP015756.1 | Clostridium estertheticum subsp. estertheticum |
| 21 | 849365 | 849598 | + | NZ_CP029206.1 | Actinobacillus porcitonsillarum |
| 22 | 121779 | 121985 | - | NZ_CP019698.1 | Desulfotomaculum ferrireducens |
| 23 | 2696 | 2908 | + | NZ_CP020038.1 | Agarilytica rhodophyticola |
| 24 | 6055630 | 6055875 | - | NZ_CP043311.1 | Pseudomonas lalkuanensis |
| 25 | 1695026 | 1695244 | - | NZ_CP012362.1 | Oblitimonas alkaliphila |
| 26 | 4528583 | 4528816 | - | NZ_CP012676.1 | Pseudomonas versuta |
| 27 | 611370 | 611591 | - | NZ_CP012040.1 | Cyclobacterium amurskyense |
| 28 | 1297801 | 1298052 | - | NZ_CP054301.1 | Marinomonas primoryensis |
| 29 | 300887 | 301135 | + | NZ_CP013336.1 | Fusobacterium hwasookii ChDC F206 |
| 30 | 1952343 | 1952555 | - | NZ_CP038018.1 | Eikenella exigua |
| 31 | 2668669 | 2668914 | + | NZ_CP029822.1 | Entomomonas moraniae |
| 32 | 79981 | 80220 | - | NZ_CP016953.1 | Streptococcus himalayensis |
| 33 | 2165987 | 2166199 | + | NZ_CP059569.1 | Kingella oralis |
| 34 | 337731 | 337961 | - | NC_010729.1 | Porphyromonas gingivalis ATCC 33277 |
| 35 | 2911737 | 2911967 | + | NZ_CP011367.1 | Thioalkalivibrio versutus |
| 36 | 2559512 | 2559724 | - | NZ_CP017237.1 | Moorella thermoacetica |
| 37 | 2433855 | 2434064 | - | NZ_LT906477.1 | Clostridium cochlearium |
| 38 | 4894940 | 4895185 | - | NZ_CP062158.2 | Pseudomonas lundensis |
| 39 | 3223875 | 3224072 | - | NC_008148.1 | Rubrobacter xylanophilus DSM 9941 |
| 40 | 3438903 | 3439157 | - | NZ_CP070273.1 | Marinomonas foliarum |
| 41 | 2419811 | 2420071 | - | NC_007519.1 | Desulfovibrio alaskensis G20 |
| 42 | 1683340 | 1683570 | - | NZ_CP007715.1 | Actinobacillus equuli subsp. equuli |
| 43 | 3243105 | 3243335 | + | NZ_LT906459.1 | Odoribacter splanchnicus |
| 44 | 2568308 | 2568517 | - | NZ_LR134313.1 | Neisseria canis |
| 45 | 7118471 | 7118698 | + | NZ_CP032382.1 | Chryseolinea soli |
| 46 | 905903 | 906139 | + | NZ_CP036281.1 | Polystyrenella longa |
| 47 | 749886 | 750098 | - | NC_012108.1 | Desulfobacterium autotrophicum HRM2 |
| 48 | 2220472 | 2220699 | + | NZ_CP030753.1 | Actinobacillus pleuropneumoniae |
| 49 | 3004712 | 3004936 | - | NZ_CP012836.1 | Algoriphagus sanaruensis |
| 50 | 6377405 | 6377653 | - | NZ_CP021425.1 | Oleiphilus messinensis |
| 51 | 2304288 | 2304500 | - | NZ_AP019829.2 | Leptotrichia wadei |
| 52 | 85515 | 85727 | + | NZ_CP031700.1 | Neisseria zalophi |
| 53 | 751105 | 751350 | - | NZ_CP014230.1 | Desulfomicrobium orale DSM 12838 |
| 54 | 398266 | 398475 | + | NZ_CP011451.1 | Nitrosomonas communis |
| 55 | 1399590 | 1399820 | + | NZ_CP045927.1 | Staphylococcus agnetis |
| 56 | 4643231 | 4643443 | - | NZ_AP021874.1 | Desulfosarcina alkanivorans |
| 57 | 224180 | 224398 | + | NC_015577.1 | Treponema azotonutricium ZAS-9 |
| 58 | 385708 | 385926 | - | NZ_CP061799.1 | Desulfonema limicola |
| 59 | 6762298 | 6762543 | - | NZ_CP014870.1 | Pseudomonas silesiensis |
| 60 | 1936757 | 1936966 | + | NZ_LT906446.1 | Megamonas hypermegale |
| 61 | 3526113 | 3526337 | - | NC_013851.1 | Allochromatium vinosum DSM 180 |
| 62 | 2268653 | 2268862 | + | NZ_CP015519.1 | Syntrophotalea acetylenivorans |
| 63 | 3243620 | 3243829 | - | NZ_CP042914.1 | Roseimaritima ulvae |
| 64 | 3070417 | 3070626 | - | NZ_CP014170.1 | Clostridium tyrobutyricum |
| 65 | 4141807 | 4142016 | - | NZ_CP011663.1 | Clostridium sporogenes |
| 66 | 3551451 | 3551696 | - | NZ_CP014262.1 | Pseudomonas corrugata |
| 67 | 5209 | 5406 | + | NC_015500.1 | Treponema brennaborense DSM 12168 |
| 68 | 1167217 | 1167441 | - | NC_007759.1 | Syntrophus aciditrophicus SB |
| 69 | 120793 | 121038 | + | NZ_CP070503.1 | Pseudomonas atacamensis |
| 70 | 6682038 | 6682283 | - | NZ_CP035088.1 | Pseudomonas viciae |
| 71 | 4223796 | 4224041 | + | NZ_CP048810.1 | Pseudomonas bijieensis |
| 72 | 3898753 | 3898998 | + | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 73 | 6826291 | 6826536 | - | NZ_CP061079.1 | Pseudomonas chlororaphis |
| 74 | 6007532 | 6007777 | - | NZ_CP067022.1 | Pseudomonas cannabina pv. alisalensis |
| 75 | 1398301 | 1398537 | + | NZ_LT906464.1 | Staphylococcus muscae |
| 76 | 529092 | 529292 | + | NC_017079.1 | Caldilinea aerophila DSM 14535 = NBRC 104270 |
| 77 | 203381 | 203626 | - | NZ_CP054205.1 | Pseudomonas rhodesiae |
| 78 | 6867047 | 6867292 | - | NZ_LS999205.1 | Pseudomonas protegens CHA0 |
| 79 | 2759275 | 2759499 | - | NZ_CP039268.1 | Thermochromatium tepidum ATCC 43061 |
| 80 | 160669 | 160875 | + | NZ_CP007028.1 | Thermocrinis ruber |
| 81 | 40741 | 40962 | - | NZ_CP031518.1 | Treponema ruminis |
| 82 | 683341 | 683598 | + | NC_016605.1 | Pediococcus claussenii ATCC BAA-344 |
| 83 | 2500691 | 2500891 | - | NZ_CP059565.1 | Neisseria wadsworthii |
| 84 | 6396091 | 6396336 | - | NC_004578.1 | Pseudomonas syringae pv. tomato str. DC3000 |
| 85 | 1649313 | 1649582 | - | NZ_CP035492.1 | Paenibacillus protaetiae |
| 86 | 2684753 | 2684962 | - | NZ_AP019845.1 | Leptotrichia trevisanii |
| 87 | 1922756 | 1923004 | - | NZ_CP046037.1 | Latilactobacillus sakei |
| 88 | 1058895 | 1059104 | - | NC_011959.1 | Thermomicrobium roseum DSM 5159 |
| 89 | 3623715 | 3623921 | - | NC_019903.1 | Desulfitobacterium dichloroeliminans LMG P-21439 |
| 90 | 2327206 | 2327460 | + | NC_022600.1 | Gloeobacter kilaueensis JS1 |
| 91 | 292173 | 292391 | + | NZ_HG322949.1 | Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 |
| 92 | 3090481 | 3090681 | - | NZ_CP014204.2 | Clostridium baratii |
| 93 | 3576106 | 3576321 | - | NZ_CP016502.1 | Acetivibrio thermocellus DSM 2360 |
| 94 | 3424543 | 3424776 | + | NC_015276.1 | Marinomonas mediterranea MMB-1 |
| 95 | 669841 | 670050 | - | NZ_CP064781.1 | Azospira restricta |
| 96 | 3263943 | 3264143 | - | NZ_CP017253.2 | Clostridium taeniosporum |
| 97 | 1186687 | 1186935 | + | NC_012881.1 | Maridesulfovibrio salexigens DSM 2638 |
| 98 | 3867212 | 3867445 | - | NZ_CP054139.1 | Mucilaginibacter mali |
| 99 | 450117 | 450314 | + | NZ_AP019004.1 | Phascolarctobacterium faecium |
| 100 | 1258180 | 1258386 | + | NC_017161.1 | Hydrogenobacter thermophilus TK-6 |
| 101 | 2378908 | 2379141 | - | NZ_CP011412.1 | Sedimenticola thiotaurini |
| 102 | 1683537 | 1683746 | + | NZ_CP022386.1 | Capnocytophaga gingivalis |
| 103 | 3664896 | 3665105 | - | NC_007498.2 | Syntrophotalea carbinolica DSM 2380 |
| 104 | 3957634 | 3957846 | - | NZ_CP010802.1 | Desulfuromonas soudanensis |
| 105 | 1022695 | 1022934 | + | NZ_AP014509.1 | Thermotoga caldifontis AZM44c09 |
| 106 | 3602946 | 3603161 | - | NZ_CP025197.1 | Acetivibrio saccincola |
| 107 | 2567092 | 2567301 | - | NC_015437.1 | Selenomonas sputigena ATCC 35185 |
| 108 | 5195 | 5392 | + | NC_015385.1 | Treponema succinifaciens DSM 2489 |
| 109 | 1271671 | 1271913 | + | NZ_AP019551.1 | Athalassotoga saccharophila |
| 110 | 3941630 | 3941845 | - | NC_015687.1 | Clostridium acetobutylicum DSM 1731 |
| 111 | 77527 | 77808 | - | NZ_CP038017.1 | Allofrancisella frigidaquae |
| 112 | 83796 | 84077 | - | NZ_CP038241.1 | Allofrancisella inopinata |
| 113 | 178924 | 179136 | + | NZ_CP014176.1 | Clostridium argentinense |
| 114 | 2104048 | 2104257 | - | NZ_AP017470.1 | Thermotomaculum hydrothermale |
| 115 | 1937249 | 1937458 | + | NZ_AP017655.1 | Sphingobium cloacae |
| 116 | 2784696 | 2784905 | - | NC_014410.1 | Thermoanaerobacterium thermosaccharolyticum DSM 571 |
| 117 | 3571959 | 3572156 | + | NZ_CP047984.1 | Pontibacter russatus |
| 118 | 2600398 | 2600655 | + | NZ_CP035688.1 | Vibrio metoecus |
| 119 | 3219 | 3476 | + | NZ_AP014524.1 | Vibrio cholerae MS6 |
| 120 | 2130928 | 2131161 | + | NZ_CP040602.1 | Thiomicrorhabdus sediminis |
| 121 | 2851942 | 2852151 | - | NC_022097.1 | Treponema pedis str. T A4 |
| 122 | 329691 | 329948 | - | NZ_CP005974.1 | Photobacterium gaetbulicola Gung47 |
| 123 | 2948198 | 2948395 | + | NC_002570.2 | Alkalihalobacillus halodurans C-125 |
| 124 | 2682214 | 2682414 | + | NC_015164.1 | Phocaeicola salanitronis DSM 18170 |
| 125 | 338191 | 338448 | - | NZ_CP070624.1 | Photobacterium damselae subsp. damselae |
| 126 | 652581 | 652808 | + | NZ_CP035467.1 | Methylotuvimicrobium buryatense |
| 127 | 4043663 | 4043875 | - | NC_016894.1 | Acetobacterium woodii DSM 1030 |
| 128 | 2144418 | 2144621 | - | NZ_LR778174.1 | Veillonella parvula |
| 129 | 65806 | 66003 | + | NZ_LN877293.1 | Bacteroides fragilis |
| 130 | 2141726 | 2141938 | - | NZ_AP019827.1 | Leptotrichia shahii |
| 131 | 1410860 | 1411114 | + | NZ_CP026538.1 | Desulfovibrio carbinolicus |
| 132 | 3566006 | 3566254 | - | NZ_CP017415.1 | Acidihalobacter yilgarnenesis |
| 133 | 4408824 | 4409033 | - | NC_016048.1 | Oscillibacter valericigenes Sjm18-20 |
| 134 | 2941368 | 2941592 | + | NZ_CP014476.1 | Methylomonas denitrificans |
| 135 | 2897914 | 2898171 | - | NZ_CP033078.1 | Vibrio zhugei |
| 136 | 281994 | 282200 | - | NZ_CP015029.1 | Frederiksenia canicola |
| 137 | 454583 | 454792 | + | NC_013895.2 | Mageeibacillus indolicus UPII9-5 |
| 138 | 2879539 | 2879769 | - | NZ_CP007035.1 | Niabella soli DSM 19437 |
| 139 | 2533311 | 2533520 | - | NC_015555.1 | Thermoanaerobacterium xylanolyticum LX-11 |
| 140 | 2344 | 2553 | + | NZ_CP047602.1 | Thermoanaerobacterium aotearoense |
| 141 | 2095411 | 2095632 | - | NZ_AP022321.1 | Veillonella nakazawae |
| 142 | 3511904 | 3512161 | - | NZ_CP071325.1 | Photobacterium ganghwense |
| 143 | 1142062 | 1142277 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 144 | 3210248 | 3210475 | + | NZ_CP044060.1 | Aeromonas veronii |
| 145 | 3475004 | 3475231 | + | NZ_CP065745.1 | Aeromonas allosaccharophila |
| 146 | 4754800 | 4755027 | - | NZ_AP022188.1 | Aeromonas media |
| 147 | 2114347 | 2114568 | - | NZ_LR134375.1 | Veillonella dispar |
| 148 | 2837373 | 2837633 | - | NZ_CP040021.1 | Salinivibrio kushneri |
| 149 | 5278066 | 5278275 | - | NC_011830.1 | Desulfitobacterium hafniense DCB-2 |
| 150 | 3436207 | 3436449 | - | NZ_CP051884.1 | Cellulomonas taurus |
| 151 | 3290840 | 3291097 | - | NZ_CP009354.1 | Vibrio tubiashii ATCC 19109 |
| 152 | 1631518 | 1631772 | + | NC_012796.1 | Desulfovibrio magneticus RS-1 |
| 153 | 1421079 | 1421291 | + | NZ_CP040530.1 | Bacteroides thetaiotaomicron |
| 154 | 3064476 | 3064685 | - | NZ_CP022413.2 | Blautia hansenii DSM 20583 |
| 155 | 324787 | 324984 | + | NZ_CP006944.1 | Mannheimia varigena USDA-ARS-USMARC-1312 |
| 156 | 108792 | 108998 | - | NC_000918.1 | Aquifex aeolicus VF5 |
| 157 | 482747 | 482956 | - | NC_012438.1 | Sulfurihydrogenibium azorense Az-Fu1 |
| 158 | 3698485 | 3698712 | + | NZ_CP040449.1 | Aeromonas simiae |
| 159 | 1824043 | 1824270 | + | NZ_CP046793.1 | Vibrio metschnikovii |
| 160 | 898720 | 898947 | - | NZ_LT906462.1 | Mammaliicoccus stepanovicii |
| 161 | 421045 | 421308 | - | NZ_CP053627.1 | Xylella taiwanensis |
| 162 | 3424447 | 3424662 | + | NZ_LT960611.1 | Vibrio tapetis subsp. tapetis |
| 163 | 4907548 | 4907805 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 164 | 2158907 | 2159164 | - | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 165 | 4853100 | 4853357 | + | NC_014500.1 | Dickeya dadantii 3937 |
| 166 | 2782059 | 2782316 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 167 | 4315739 | 4315996 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 168 | 4738908 | 4739165 | - | NZ_CP025799.1 | Dickeya zeae |
| 169 | 4812474 | 4812731 | - | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 170 | 2994008 | 2994205 | + | NZ_LS483377.1 | Stenotrophomonas maltophilia |
| 171 | 53549 | 53758 | + | NZ_CP030280.1 | Blautia argi |
| 172 | 851339 | 851587 | + | NZ_CP016359.1 | Gramella flava JLT2011 |
| 173 | 5531029 | 5531292 | - | NZ_CP009285.1 | Paenibacillus borealis |
| 174 | 3344130 | 3344387 | - | NZ_CP013189.1 | Pseudohongiella spirulinae |
| 175 | 4448675 | 4448932 | + | NZ_LT615367.1 | Dickeya aquatica |
| 176 | 1341917 | 1342138 | + | NZ_CP012505.1 | Francisella persica ATCC VR-331 |
| 177 | 5862434 | 5862640 | - | NC_016584.1 | Desulfosporosinus orientis DSM 765 |
| 178 | 3844300 | 3844527 | - | NZ_CP013187.1 | Pseudoalteromonas phenolica |
| 179 | 429279 | 429485 | + | NC_014926.1 | Thermovibrio ammonificans HB-1 |
| 180 | 2532739 | 2532936 | - | NC_014960.1 | Anaerolinea thermophila UNI-1 |
| 181 | 1682647 | 1682895 | - | NZ_CP019343.1 | Oceanicoccus sagamiensis |
| 182 | 4127 | 4384 | - | NZ_AP018689.1 | Vibrio aphrogenes |
| 183 | 1836744 | 1836953 | + | NC_002971.4 | Coxiella burnetii RSA 493 |
| 184 | 3053059 | 3053298 | + | NZ_LS483250.1 | Moritella yayanosii |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP013742.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF12631.9 | 0.64 | 118 | 1736.5 | same-strand | MnmE helical domain |
| 2 | PF10396.11 | 0.64 | 118 | 1736.5 | same-strand | GTP-binding protein TrmE N-terminus |
| 3 | PF02096.22 | 0.79 | 146 | 9.0 | same-strand | 60Kd inner membrane protein |
| 4 | PF00825.20 | 0.65 | 119 | -3 | same-strand | Ribonuclease P |
| 5 | PF00468.19 | 0.62 | 115 | 380 | same-strand | Ribosomal protein L34 |
++ More..