Result : Q5M080
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 30S ribosomal protein S20 |
| NCBI Accession ID | CP000024.1 |
| Organism | Streptococcus thermophilus (strain CNRZ 1066) |
| Left | 750196 |
| Right | 750447 |
| Strand | - |
| Nucleotide Sequence | TTGGAGGTGAAAACATTGGCAAATATTAAATCAGCTATCAAACGCGCTGAACTTAACGTTAAACAAAACGAAAAAAACTCAGCTCAAAAATCAGCTTTGCGTACTGTTATTAAGGCATTCAAGGCTAACCCAACTGAAGAAGCTTTCCGAGCTGCATCAGCAAGCATCGATAAAGCCGCTTCAAAAGGTTTGATTCATAAAAACAAAGCAAGCCGAGATAAATCACGTCTTGCAGCTAAATTGGCTAACTAA |
| Sequence | MEVKTLANIKSAIKRAELNVKQNEKNSAQKSALRTVIKAFKANPTEEAFRAASASIDKAASKGLIHKNKASRDKSRLAAKLAN |
| Source of smORF | Swiss-Prot |
| Function | Binds directly to 16S ribosomal RNA. {ECO:0000255|HAMAP-Rule:MF_00500}. |
| Pubmed ID | 15543133 |
| Domain | CDD:412349 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | Q5M080 |
| ORF Length (Amino Acid) | 83 |
++ More..
| Conservation Analysis |
No. of Species: 247
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 842290 | 842541 | - | NC_017581.1 | Streptococcus thermophilus JIM 8232 |
| 2 | 806609 | 806860 | - | NZ_LR134275.1 | Streptococcus vestibularis |
| 3 | 1105234 | 1105485 | + | NZ_CP039457.1 | Streptococcus pasteurianus |
| 4 | 2001266 | 2001517 | + | NZ_CP054015.1 | Streptococcus gallolyticus |
| 5 | 858956 | 859207 | - | NZ_LS483343.1 | Streptococcus ferus |
| 6 | 1273328 | 1273576 | + | NZ_CP029491.1 | Streptococcus sobrinus |
| 7 | 894834 | 895085 | + | NZ_LS483403.1 | Streptococcus lutetiensis |
| 8 | 943465 | 943713 | - | NZ_LR134512.1 | Streptococcus agalactiae |
| 9 | 1128754 | 1129005 | + | NZ_LR134336.1 | Streptococcus oralis ATCC 35037 |
| 10 | 564197 | 564448 | - | NZ_CP032621.1 | Streptococcus gwangjuense |
| 11 | 810566 | 810817 | - | NC_015875.1 | Streptococcus pseudopneumoniae IS7493 |
| 12 | 1049954 | 1050202 | + | NZ_CP065061.1 | Streptococcus equi subsp. zooepidemicus |
| 13 | 910885 | 911133 | + | NZ_CP010450.1 | Streptococcus pyogenes |
| 14 | 1692913 | 1693161 | + | NZ_LR134293.1 | Streptococcus canis |
| 15 | 1167079 | 1167327 | + | NZ_LR594046.1 | Streptococcus dysgalactiae |
| 16 | 1837625 | 1837876 | + | NZ_CP043405.1 | Streptococcus ratti |
| 17 | 997386 | 997637 | + | NZ_CP034543.1 | Streptococcus periodonticum |
| 18 | 1030790 | 1031041 | + | NZ_CP012805.1 | Streptococcus anginosus |
| 19 | 1027010 | 1027258 | + | NZ_CP025536.1 | Streptococcus pluranimalium |
| 20 | 1297036 | 1297287 | + | NZ_CP031733.1 | Streptococcus chenjunshii |
| 21 | 1077016 | 1077267 | + | NZ_LS483383.1 | Streptococcus cristatus ATCC 51100 |
| 22 | 1405905 | 1406153 | - | NZ_CP022680.1 | Streptococcus respiraculi |
| 23 | 1055184 | 1055432 | + | NC_012924.1 | Streptococcus suis SC84 |
| 24 | 1812597 | 1812845 | - | NZ_CP015196.1 | Streptococcus marmotae |
| 25 | 1017625 | 1017876 | + | NZ_CP014699.1 | Streptococcus pantholopis |
| 26 | 510946 | 511194 | - | NZ_CP014835.1 | Streptococcus halotolerans |
| 27 | 1104514 | 1104762 | - | NZ_LR594049.1 | Streptococcus gordonii |
| 28 | 916111 | 916362 | - | NZ_LS483436.1 | Streptococcus intermedius |
| 29 | 910293 | 910526 | - | NZ_LR594050.1 | Streptococcus porcinus |
| 30 | 836372 | 836620 | - | NZ_AP018400.1 | Streptococcus ruminantium |
| 31 | 1356082 | 1356330 | - | NZ_CP032620.1 | Streptococcus koreensis |
| 32 | 552419 | 552673 | - | NZ_CP013237.1 | Streptococcus mutans |
| 33 | 1259969 | 1260217 | + | NZ_LT906439.1 | Streptococcus merionis |
| 34 | 266173 | 266406 | + | NZ_LR134341.1 | Streptococcus pseudoporcinus |
| 35 | 1697017 | 1697268 | - | NZ_CP016953.1 | Streptococcus himalayensis |
| 36 | 1390347 | 1390580 | + | NZ_CP032627.1 | Lactococcus allomyrinae |
| 37 | 1849526 | 1849759 | - | NZ_CP065637.1 | Lactococcus garvieae |
| 38 | 1811299 | 1811532 | + | NC_022369.1 | Lactococcus lactis subsp. cremoris KW2 |
| 39 | 1654202 | 1654435 | + | NZ_CP070872.1 | Lactococcus taiwanensis |
| 40 | 1998337 | 1998591 | - | NZ_CP023392.1 | Lactococcus raffinolactis |
| 41 | 1422170 | 1422382 | + | NZ_LS483405.1 | Levilactobacillus brevis |
| 42 | 1127323 | 1127577 | + | NZ_CP017194.1 | Lactococcus carnosus |
| 43 | 1158796 | 1159050 | + | NZ_CP017195.1 | Lactococcus paracarnosus |
| 44 | 1802897 | 1803151 | - | NZ_CP059603.1 | Levilactobacillus suantsaii |
| 45 | 2509961 | 2510239 | - | NZ_CP014912.1 | Secundilactobacillus paracollinoides |
| 46 | 143906 | 144184 | + | NZ_CP042371.1 | Secundilactobacillus malefermentans |
| 47 | 2586172 | 2586438 | + | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 48 | 826296 | 826550 | + | NZ_CP021874.1 | Enterococcus wangshanyuanii |
| 49 | 1447453 | 1447722 | + | NZ_CP018180.1 | Liquorilactobacillus nagelii |
| 50 | 916094 | 916342 | - | NZ_CP024610.1 | Lactobacillus terrae |
| 51 | 264755 | 265030 | - | NZ_CP039712.1 | Vagococcus zengguangii |
| 52 | 90688 | 90954 | + | NZ_CP063356.1 | Anaerobacillus isosaccharinicus |
| 53 | 2149642 | 2149878 | + | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 54 | 1557593 | 1557862 | + | NZ_CP030105.1 | Lactiplantibacillus plantarum |
| 55 | 1437190 | 1437444 | + | NZ_LR134483.1 | Listeria grayi |
| 56 | 2949341 | 2949577 | + | NZ_CP019659.1 | Paenibacillus larvae subsp. larvae |
| 57 | 1974129 | 1974395 | + | NZ_CP012152.1 | Anoxybacillus gonensis |
| 58 | 1317771 | 1318025 | - | NZ_CP017713.1 | Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 |
| 59 | 2432230 | 2432493 | - | NZ_CP034465.1 | Jeotgalibaca ciconiae |
| 60 | 3827116 | 3827352 | + | NZ_CP017703.1 | Aeribacillus pallidus |
| 61 | 2005105 | 2005365 | + | NC_004193.1 | Oceanobacillus iheyensis HTE831 |
| 62 | 983759 | 984022 | - | NZ_CP039710.1 | Thermoactinomyces vulgaris |
| 63 | 2865308 | 2865550 | - | NZ_CP034235.1 | Paenibacillus psychroresistens |
| 64 | 747599 | 747868 | - | NZ_CP014342.1 | Geobacillus subterraneus |
| 65 | 3454838 | 3455107 | + | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 66 | 1607426 | 1607680 | - | NC_020207.1 | Enterococcus faecium ATCC 8459 = NRRL B-2354 |
| 67 | 1581374 | 1581628 | + | NZ_CP065211.1 | Enterococcus lactis |
| 68 | 2532216 | 2532485 | + | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 69 | 1733055 | 1733324 | + | NZ_CP061470.1 | Geobacillus zalihae |
| 70 | 1404000 | 1404269 | - | NZ_CP018058.1 | Geobacillus thermocatenulatus |
| 71 | 3405030 | 3405299 | - | NZ_CP061472.1 | Geobacillus thermoleovorans |
| 72 | 633032 | 633304 | - | NZ_CP046996.1 | Dehalobacter restrictus |
| 73 | 685487 | 685753 | - | NZ_AP019750.1 | Lactobacillus delbrueckii subsp. delbrueckii |
| 74 | 1153183 | 1153437 | - | NZ_CP018061.1 | Enterococcus mundtii |
| 75 | 1085717 | 1085953 | - | NC_013791.2 | Alkalihalobacillus pseudofirmus OF4 |
| 76 | 1423793 | 1424068 | - | NC_002570.2 | Alkalihalobacillus halodurans C-125 |
| 77 | 511935 | 512189 | + | NZ_CP023501.1 | Weissella paramesenteroides |
| 78 | 1790410 | 1790673 | - | NZ_CP016843.1 | Carnobacterium divergens |
| 79 | 2791442 | 2791708 | + | NZ_CP015378.1 | Fictibacillus phosphorivorans |
| 80 | 828958 | 829212 | - | NZ_CP049886.1 | Vagococcus coleopterorum |
| 81 | 1625188 | 1625442 | + | NZ_CP023074.1 | Enterococcus thailandicus |
| 82 | 2578326 | 2578580 | - | NZ_CP012033.1 | Levilactobacillus koreensis |
| 83 | 1938494 | 1938748 | + | NC_020995.1 | Enterococcus casseliflavus EC20 |
| 84 | 2254874 | 2255128 | + | NZ_CP023011.2 | Enterococcus hirae |
| 85 | 885713 | 885931 | + | NZ_CP027563.1 | Weissella confusa |
| 86 | 5305178 | 5305450 | + | NZ_CP021780.1 | Paenibacillus donghaensis |
| 87 | 1561092 | 1561340 | - | NZ_CP010820.1 | Lysinibacillus fusiformis |
| 88 | 3091974 | 3092231 | + | NZ_CP024109.1 | Bacillus cytotoxicus |
| 89 | 1311955 | 1312173 | - | NZ_CP014332.1 | Weissella jogaejeotgali |
| 90 | 2016028 | 2016282 | + | NZ_CP027783.1 | Tetragenococcus osmophilus |
| 91 | 3091855 | 3092103 | + | NZ_CP006837.1 | Lysinibacillus varians |
| 92 | 1562212 | 1562460 | - | NZ_CP019980.1 | Lysinibacillus sphaericus |
| 93 | 1425834 | 1426103 | - | NZ_CP070511.1 | Parageobacillus toebii |
| 94 | 1641239 | 1641505 | - | NZ_CP017962.1 | Virgibacillus halodenitrificans |
| 95 | 2545967 | 2546233 | + | NZ_CP023704.1 | Caldibacillus thermoamylovorans |
| 96 | 985779 | 986051 | - | NZ_CP046570.1 | Xanthomonas albilineans |
| 97 | 1933281 | 1933544 | - | NZ_CP049740.1 | Jeotgalibaca arthritidis |
| 98 | 1277437 | 1277661 | - | NZ_AP022822.1 | Enterococcus saigonensis |
| 99 | 364702 | 364956 | - | NZ_CP012034.1 | Companilactobacillus ginsenosidimutans |
| 100 | 784424 | 784648 | + | NZ_CP009709.1 | Weizmannia coagulans DSM 1 = ATCC 7050 |
| 101 | 1491010 | 1491264 | + | NZ_LT906444.1 | Listeria welshimeri |
| 102 | 1548001 | 1548255 | + | NZ_CP009577.1 | Listeria ivanovii subsp. ivanovii |
| 103 | 1513917 | 1514171 | + | NC_003210.1 | Listeria monocytogenes EGD-e |
| 104 | 1261345 | 1261599 | + | NZ_LS483306.1 | Enterococcus cecorum |
| 105 | 1662079 | 1662312 | - | NZ_LS483476.1 | Lederbergia lentus |
| 106 | 682481 | 682735 | + | NZ_CP061835.1 | Weissella viridescens |
| 107 | 1594864 | 1595127 | - | NZ_CP065425.1 | Heyndrickxia vini |
| 108 | 1641448 | 1641717 | + | NZ_HG917868.1 | Clostridium bornimense |
| 109 | 2486200 | 2486472 | + | NC_015172.1 | Syntrophobotulus glycolicus DSM 8271 |
| 110 | 5297975 | 5298247 | + | NZ_CP009428.1 | Paenibacillus odorifer |
| 111 | 5154347 | 5154589 | + | NZ_CP026520.1 | Paenibacillus chitinolyticus |
| 112 | 4345747 | 4346004 | + | NZ_CP032365.1 | Bacillus wiedmannii |
| 113 | 1582498 | 1582752 | + | NZ_CP040586.1 | Furfurilactobacillus rossiae |
| 114 | 466916 | 467188 | + | NZ_CP045298.1 | Paenibacillus brasilensis |
| 115 | 1855223 | 1855495 | - | NZ_CP020028.1 | Paenibacillus kribbensis |
| 116 | 4306676 | 4306933 | + | NC_011725.1 | Bacillus cereus B4264 |
| 117 | 1150514 | 1150768 | + | NZ_CP012047.1 | Tetragenococcus halophilus |
| 118 | 1773073 | 1773339 | - | NC_014829.1 | Evansella cellulosilytica DSM 2522 |
| 119 | 1061761 | 1062018 | - | NZ_CP040336.1 | Bacillus luti |
| 120 | 4136729 | 4136986 | + | NC_007530.2 | Bacillus anthracis str. 'Ames Ancestor' |
| 121 | 4172249 | 4172506 | + | NZ_CP064875.1 | Bacillus toyonensis |
| 122 | 839634 | 839852 | - | NZ_CP017326.1 | Weissella soli |
| 123 | 1122511 | 1122750 | + | NZ_CP019699.1 | Novibacillus thermophilus |
| 124 | 284235 | 284507 | + | NZ_CP048429.1 | Paenibacillus jilunlii |
| 125 | 5548366 | 5548638 | + | NZ_CP009287.1 | Paenibacillus graminis |
| 126 | 260500 | 260772 | + | NZ_CP068595.1 | Paenibacillus sonchi |
| 127 | 6082503 | 6082775 | + | NZ_LN831776.1 | Paenibacillus riograndensis SBR5 |
| 128 | 672534 | 672788 | - | NZ_CP011403.1 | Ligilactobacillus salivarius str. Ren |
| 129 | 2079575 | 2079829 | + | NZ_CP009416.1 | Jeotgalibacillus malaysiensis |
| 130 | 4179713 | 4179985 | + | NZ_CP009286.1 | Paenibacillus stellifer |
| 131 | 902348 | 902584 | - | NZ_CP013652.1 | Paenibacillus naphthalenovorans |
| 132 | 766971 | 767243 | - | NZ_CP033433.1 | Cohnella candidum |
| 133 | 1845735 | 1846007 | + | NZ_CP054614.1 | Paenibacillus barcinonensis |
| 134 | 4717399 | 4717671 | + | NZ_CP043611.1 | Paenibacillus antarcticus |
| 135 | 1605709 | 1605981 | - | NZ_CP023406.1 | Luteimonas chenhongjianii |
| 136 | 6751224 | 6751460 | + | NC_017672.3 | Paenibacillus mucilaginosus K02 |
| 137 | 3313742 | 3314008 | + | NZ_LT906442.1 | Legionella waltersii |
| 138 | 3732939 | 3733217 | - | NZ_AP017928.1 | Methylocaldum marinum |
| 139 | 125651 | 125908 | + | NZ_CP053988.1 | Abiotrophia defectiva |
| 140 | 344354 | 344578 | - | NZ_CP026116.1 | Latilactobacillus curvatus JCM 1096 = DSM 20019 |
| 141 | 6276105 | 6276377 | + | NZ_CP009285.1 | Paenibacillus borealis |
| 142 | 1678056 | 1678280 | + | NC_004556.1 | Xylella fastidiosa Temecula1 |
| 143 | 3870304 | 3870576 | + | NZ_CP004078.1 | Paenibacillus sabinae T27 |
| 144 | 5575305 | 5575577 | + | NC_016641.1 | Paenibacillus terrae HPL-003 |
| 145 | 612021 | 612278 | - | NZ_CP013988.1 | Aerococcus urinaeequi |
| 146 | 1596886 | 1597143 | + | NZ_CP014164.1 | Aerococcus viridans |
| 147 | 336097 | 336351 | + | NZ_CP014159.1 | Aerococcus christensenii |
| 148 | 823884 | 824144 | - | NC_010556.1 | Exiguobacterium sibiricum 255-15 |
| 149 | 1480216 | 1480485 | - | NZ_CP029843.1 | Lysobacter maris |
| 150 | 2762138 | 2762404 | + | NZ_CP025491.2 | Legionella sainthelensi |
| 151 | 789767 | 790012 | + | NZ_CP041217.1 | Saccharibacillus brassicae |
| 152 | 4078905 | 4079165 | + | NZ_CP072425.1 | Pseudoalteromonas viridis |
| 153 | 1069662 | 1069922 | - | NZ_CP011041.1 | Pseudoalteromonas tetraodonis |
| 154 | 1055824 | 1056084 | - | NZ_CP011030.1 | Pseudoalteromonas issachenkonii |
| 155 | 1985983 | 1986255 | - | NZ_CP034346.1 | Paenibacillus lutimineralis |
| 156 | 120219 | 120470 | - | NZ_CP028251.1 | Leuconostoc mesenteroides |
| 157 | 1544415 | 1544666 | + | NZ_CP015247.1 | Leuconostoc suionicum |
| 158 | 823782 | 824054 | - | NC_021181.2 | Lactobacillus acidophilus La-14 |
| 159 | 1320348 | 1320614 | + | NZ_LR134374.1 | Legionella spiritensis |
| 160 | 847305 | 847532 | - | NZ_CP049366.1 | Companilactobacillus pabuli |
| 161 | 1603971 | 1604198 | + | NZ_CP017702.1 | Companilactobacillus farciminis KCTC 3681 = DSM 20184 |
| 162 | 1494160 | 1494387 | + | NZ_CP040736.1 | Companilactobacillus futsaii |
| 163 | 2988497 | 2988763 | + | NZ_CP013742.1 | Legionella pneumophila |
| 164 | 1418990 | 1419265 | - | NC_015687.1 | Clostridium acetobutylicum DSM 1731 |
| 165 | 2548709 | 2548963 | + | NZ_CP037940.1 | Weissella cryptocerci |
| 166 | 4311547 | 4311819 | + | NZ_CP013023.1 | Paenibacillus bovis |
| 167 | 879717 | 879980 | - | NZ_CP017253.2 | Clostridium taeniosporum |
| 168 | 3106612 | 3106878 | + | NC_013861.1 | Legionella longbeachae NSW150 |
| 169 | 4332809 | 4333075 | + | NZ_CP024035.1 | Priestia aryabhattai |
| 170 | 1116019 | 1116243 | + | NZ_CP045007.1 | Latilactobacillus graminis |
| 171 | 617854 | 618126 | - | NZ_CP015444.1 | Lactobacillus helveticus |
| 172 | 531603 | 531866 | - | NZ_CP019728.1 | Jeotgalibaca dankookensis |
| 173 | 2491396 | 2491662 | + | NZ_CP013019.1 | Clostridium pasteurianum |
| 174 | 2080799 | 2081059 | + | NZ_CP031961.1 | Pseudoalteromonas tunicata |
| 175 | 2335015 | 2335281 | + | NZ_CP032416.1 | Clostridium fermenticellae |
| 176 | 1982122 | 1982385 | + | NZ_CP016786.1 | Clostridium isatidis |
| 177 | 2160830 | 2161099 | + | NZ_CP032757.1 | Lactiplantibacillus pentosus |
| 178 | 2176283 | 2176549 | + | NZ_LT906451.1 | Legionella lansingensis |
| 179 | 2404683 | 2404949 | + | NZ_CP016397.1 | Legionella clemsonensis |
| 180 | 1870668 | 1870892 | + | NZ_CP046037.1 | Latilactobacillus sakei |
| 181 | 857682 | 857933 | - | NZ_CP029544.1 | Lactobacillus helsingborgensis |
| 182 | 1390259 | 1390531 | + | NZ_CP059829.1 | Lactobacillus ultunensis |
| 183 | 472908 | 473174 | - | NZ_CP020953.1 | Clostridium drakei |
| 184 | 3774083 | 3774349 | + | NZ_CP009933.1 | Clostridium scatologenes |
| 185 | 1284450 | 1284716 | - | NZ_CP016020.1 | Bacillus weihaiensis |
| 186 | 687235 | 687477 | - | NZ_CP045293.1 | Paenibacillus guangzhouensis |
| 187 | 969177 | 969437 | - | NZ_CP040676.1 | Exiguobacterium mexicanum |
| 188 | 4242136 | 4242408 | - | NZ_CP011058.1 | Paenibacillus beijingensis |
| 189 | 3171772 | 3172032 | - | NZ_CP072133.1 | Pseudoalteromonas xiamenensis |
| 190 | 847902 | 848168 | - | NZ_LN681225.1 | Legionella hackeliae |
| 191 | 2547825 | 2548097 | + | NZ_CP014167.1 | Paenibacillus yonginensis |
| 192 | 1538903 | 1539145 | + | NZ_CP045295.1 | Paenibacillus cellulositrophicus |
| 193 | 1465963 | 1466214 | - | NZ_CP018888.1 | Amylolactobacillus amylophilus DSM 20533 = JCM 1125 |
| 194 | 779795 | 780046 | + | NZ_CP031835.1 | Lactobacillus amylolyticus |
| 195 | 567675 | 567941 | - | NZ_CP038254.1 | Legionella israelensis |
| 196 | 631027 | 631233 | + | NZ_CP014163.1 | Aerococcus urinaehominis |
| 197 | 1163557 | 1163823 | - | NZ_CP022358.1 | Shewanella bicestrii |
| 198 | 1383965 | 1384225 | - | NZ_CP028913.1 | Agromyces badenianii |
| 199 | 2329966 | 2330211 | - | NC_020520.1 | Ilumatobacter coccineus YM16-304 |
| 200 | 4460432 | 4460692 | + | NZ_CP028897.1 | Dongshaea marina |
| 201 | 992228 | 992494 | - | NZ_LN614830.1 | Tatlockia micdadei |
| 202 | 1370820 | 1371092 | + | NZ_CP016809.1 | Paenibacillus ihbetae |
| 203 | 3482276 | 3482542 | + | NZ_CP053989.1 | Niallia circulans |
| 204 | 1172096 | 1172365 | - | NZ_CP033326.1 | Xanthomonas cucurbitae |
| 205 | 4899977 | 4900249 | + | NZ_CP043476.1 | Xanthomonas hyacinthi |
| 206 | 2948989 | 2949252 | + | NZ_CP030775.1 | Clostridium butyricum |
| 207 | 974007 | 974270 | - | NZ_CP043998.1 | Clostridium diolis |
| 208 | 2983972 | 2984232 | + | NZ_CP031769.1 | Salinimonas sediminis |
| 209 | 1366924 | 1367190 | - | NC_016901.1 | Shewanella baltica OS678 |
| 210 | 3504836 | 3505105 | + | NZ_CP058243.1 | Xanthomonas campestris pv. raphani |
| 211 | 5244179 | 5244445 | - | NZ_CP011803.1 | Clostridium carboxidivorans P7 |
| 212 | 2509857 | 2510102 | + | NC_019897.1 | Thermobacillus composti KWC4 |
| 213 | 3684065 | 3684340 | - | NZ_CP017705.1 | Brevibacillus laterosporus DSM 25 |
| 214 | 2071672 | 2071941 | + | NZ_CP016878.1 | Xanthomonas hortorum |
| 215 | 1028057 | 1028326 | - | NZ_LT853882.1 | Xanthomonas fragariae |
| 216 | 895200 | 895466 | - | NC_011837.1 | Clostridium kluyveri NBRC 12016 |
| 217 | 1419732 | 1419992 | - | NZ_CP036536.1 | Salinimonas lutimaris |
| 218 | 3125387 | 3125653 | - | NZ_CP012395.1 | Clostridium autoethanogenum DSM 10061 |
| 219 | 875801 | 876067 | - | NC_014328.1 | Clostridium ljungdahlii DSM 13528 |
| 220 | 3484983 | 3485243 | - | NZ_CP020465.1 | Cognaticolwellia beringensis |
| 221 | 1400883 | 1401122 | - | NZ_CP016502.1 | Acetivibrio thermocellus DSM 2360 |
| 222 | 4115128 | 4115403 | + | NZ_LR134338.1 | Brevibacillus brevis |
| 223 | 3538956 | 3539219 | - | NZ_CP052766.1 | Alteromonas pelagimontana |
| 224 | 925402 | 925668 | - | NZ_CP029477.1 | Lactobacillus kullabergensis |
| 225 | 2534619 | 2534882 | - | NZ_CP039268.1 | Thermochromatium tepidum ATCC 43061 |
| 226 | 1520378 | 1520638 | + | NZ_CP028129.1 | Rathayibacter rathayi |
| 227 | 1396523 | 1396783 | + | NZ_CP034759.1 | Litorilituus sediminis |
| 228 | 2272083 | 2272349 | + | NZ_CP028324.1 | Massilia armeniaca |
| 229 | 3947827 | 3948093 | + | NC_011566.1 | Shewanella piezotolerans WP3 |
| 230 | 1618738 | 1618998 | - | NZ_CP009312.1 | Lawsonella clevelandensis |
| 231 | 2956820 | 2957086 | + | NZ_CP014176.1 | Clostridium argentinense |
| 232 | 942552 | 942812 | - | NZ_CP025120.1 | Kangiella profundi |
| 233 | 1749763 | 1750029 | + | NC_015520.1 | Mahella australiensis 50-1 BON |
| 234 | 1169924 | 1170190 | + | NZ_CP018809.1 | Lactobacillus jensenii |
| 235 | 729806 | 730072 | - | NZ_CP029476.1 | Lactobacillus apis |
| 236 | 4142364 | 4142627 | + | NC_016112.1 | Methylotuvimicrobium alcaliphilum 20Z |
| 237 | 2995257 | 2995523 | + | NZ_CP045096.1 | Streptomyces phaeolivaceus |
| 238 | 3056649 | 3056915 | + | NZ_CP059991.1 | Streptomyces gardneri |
| 239 | 2728512 | 2728754 | - | NZ_CP034248.1 | Paenibacillus lentus |
| 240 | 2406169 | 2406435 | + | NZ_CP029196.1 | Streptomyces venezuelae |
| 241 | 1244259 | 1244528 | - | NZ_LS483377.1 | Stenotrophomonas maltophilia |
| 242 | 1304644 | 1304913 | - | NZ_CP037883.1 | Stenotrophomonas indicatrix |
| 243 | 5702621 | 5702887 | + | NZ_CP030862.1 | Streptomyces globosus |
| 244 | 5303151 | 5303417 | - | NZ_CP023702.1 | Streptomyces nitrosporeus |
| 245 | 2834670 | 2834936 | + | NZ_CP010407.1 | Streptomyces vietnamensis |
| 246 | 2051815 | 2052081 | + | NZ_CP031194.1 | Streptomyces paludis |
| 247 | 2820619 | 2820882 | + | NZ_CP008849.1 | Alteromonas australica |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LS483405.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF06144.15 | 0.64 | 159 | 95 | opposite-strand | DNA polymerase III, delta subunit |
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