Result : A8G5C7
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Cytochrome b6-f complex subunit 5 (Cytochrome b6-f complex subunit PetG) (Cytochrome b6-f complex subunit V) |
| NCBI Accession ID | CP000825.1 |
| Organism | Prochlorococcus marinus (strain MIT 9215) |
| Left | 1008481 |
| Right | 1008600 |
| Strand | + |
| Nucleotide Sequence | ATGATCGAGCCTCTTCTATGTGGAATTGTTTTAGGTTTAGTTCCAATAACTCTTCTTGGATTATTCGTAAGTGCATGGAATCAATACAGAAGAGGTTCAGGGATGCTTGACATTGATTAA |
| Sequence | MIEPLLCGIVLGLVPITLLGLFVSAWNQYRRGSGMLDID |
| Source of smORF | Swiss-Prot |
| Function | Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex. {ECO:0000255|HAMAP-Rule:MF_00432}. |
| Pubmed ID | 18159947 |
| Domain | CDD:420034 |
| Functional Category | Others |
| Uniprot ID | A8G5C7 |
| ORF Length (Amino Acid) | 39 |
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| Conservation Analysis |
No. of Species: 23
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1073451 | 1073570 | - | NC_005042.1 | Prochlorococcus marinus subsp. marinus str. CCMP1375 |
| 2 | 3199521 | 3199634 | + | NC_019675.1 | Cyanobium gracile PCC 6307 |
| 3 | 893900 | 894013 | + | NC_004113.1 | Thermosynechococcus vestitus BP-1 |
| 4 | 1064923 | 1065036 | - | NZ_AP018202.1 | Thermostichus vulcanus NIES-2134 |
| 5 | 1794837 | 1794950 | - | NZ_CP018092.1 | Synechococcus lividus PCC 6715 |
| 6 | 5175550 | 5175663 | + | NZ_AP014638.1 | Leptolyngbya boryana IAM M-101 |
| 7 | 5267428 | 5267541 | - | NC_019751.1 | Calothrix sp. PCC 6303 |
| 8 | 3945083 | 3945196 | + | NZ_CP021983.2 | Halomicronema hongdechloris C2206 |
| 9 | 4260871 | 4260987 | + | NC_010296.1 | Microcystis aeruginosa NIES-843 |
| 10 | 4092245 | 4092361 | + | NC_011729.1 | Gloeothece citriformis PCC 7424 |
| 11 | 5165141 | 5165257 | + | NC_014501.1 | Gloeothece verrucosa PCC 7822 |
| 12 | 2044745 | 2044855 | - | NC_009925.1 | Acaryochloris marina MBIC11017 |
| 13 | 271989 | 272108 | - | NC_019729.1 | Oscillatoria nigro-viridis PCC 7112 |
| 14 | 857533 | 857646 | + | NZ_CP060822.1 | Cylindrospermopsis curvispora GIHE-G1 |
| 15 | 1177730 | 1177843 | - | NC_019753.1 | Crinalium epipsammum PCC 9333 |
| 16 | 2045586 | 2045699 | + | NC_019693.1 | Oscillatoria acuminata PCC 6304 |
| 17 | 549944 | 550066 | - | NC_005125.1 | Gloeobacter violaceus PCC 7421 |
| 18 | 4562693 | 4562809 | + | NC_022600.1 | Gloeobacter kilaueensis JS1 |
| 19 | 2940436 | 2940552 | + | NC_019695.1 | Chroococcidiopsis thermalis PCC 7203 |
| 20 | 2778033 | 2778149 | + | NC_019776.1 | Cyanobacterium aponinum PCC 10605 |
| 21 | 2365818 | 2365919 | - | NC_019780.1 | Dactylococcopsis salina PCC 8305 |
| 22 | 2888277 | 2888393 | - | NC_019748.1 | Stanieria cyanosphaera PCC 7437 |
| 23 | 3420681 | 3420797 | + | NC_019689.1 | Pleurocapsa sp. PCC 7327 |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_005042.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF13442.8 | 0.65 | 15 | 224 | opposite-strand | Cytochrome C oxidase, cbb3-type, subunit III |
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